Execution Chart

We display below the execution chart for this examination (boot time has been removed).

Trace from the execution

Formatting '/local/x2003239/mcc2019-input.r019-csrt-155225079800033.qcow2', fmt=qcow2 size=4294967296 backing_file=/local/x2003239/mcc2019-input.qcow2 encryption=off cluster_size=65536 lazy_refcounts=off refcount_bits=16
Waiting for the VM to be ready (probing ssh)
..................
=====================================================================
Generated by BenchKit 2-3954
Executing tool itstools
Input is Angiogenesis-PT-15, examination is LTLCardinality
Time confinement is 3600 seconds
Memory confinement is 16384 MBytes
Number of cores is 4
Run identifier is r019-csrt-155225079800033
=====================================================================

--------------------
preparation of the directory to be used:
/home/mcc/execution
total 204K
-rw-r--r-- 1 mcc users 3.8K Feb 9 06:49 CTLCardinality.txt
-rw-r--r-- 1 mcc users 19K Feb 9 06:49 CTLCardinality.xml
-rw-r--r-- 1 mcc users 2.3K Feb 5 03:33 CTLFireability.txt
-rw-r--r-- 1 mcc users 16K Feb 5 03:33 CTLFireability.xml
-rw-r--r-- 1 mcc users 4.0K Mar 10 17:31 GenericPropertiesDefinition.xml
-rw-r--r-- 1 mcc users 6.0K Mar 10 17:31 GenericPropertiesVerdict.xml
-rw-r--r-- 1 mcc users 105 Feb 24 15:05 GlobalProperties.txt
-rw-r--r-- 1 mcc users 343 Feb 24 15:05 GlobalProperties.xml
-rw-r--r-- 1 mcc users 2.7K Feb 4 22:52 LTLCardinality.txt
-rw-r--r-- 1 mcc users 12K Feb 4 22:52 LTLCardinality.xml
-rw-r--r-- 1 mcc users 1.8K Feb 4 22:32 LTLFireability.txt
-rw-r--r-- 1 mcc users 8.6K Feb 4 22:32 LTLFireability.xml
-rw-r--r-- 1 mcc users 4.5K Feb 2 00:15 ReachabilityCardinality.txt
-rw-r--r-- 1 mcc users 22K Feb 2 00:15 ReachabilityCardinality.xml
-rw-r--r-- 1 mcc users 2.5K Jan 29 11:28 ReachabilityFireability.txt
-rw-r--r-- 1 mcc users 14K Jan 29 11:28 ReachabilityFireability.xml
-rw-r--r-- 1 mcc users 1.7K Feb 4 22:18 UpperBounds.txt
-rw-r--r-- 1 mcc users 3.7K Feb 4 22:18 UpperBounds.xml
-rw-r--r-- 1 mcc users 6 Jan 29 09:34 equiv_col
-rw-r--r-- 1 mcc users 3 Jan 29 09:34 instance
-rw-r--r-- 1 mcc users 6 Jan 29 09:34 iscolored
-rw-r--r-- 1 mcc users 33K Mar 10 17:31 model.pnml

--------------------
content from stdout:

=== Data for post analysis generated by BenchKit (invocation template)

The expected result is a vector of booleans
BOOL_VECTOR

here is the order used to build the result vector(from text file)
FORMULA_NAME Angiogenesis-PT-15-LTLCardinality-00
FORMULA_NAME Angiogenesis-PT-15-LTLCardinality-01
FORMULA_NAME Angiogenesis-PT-15-LTLCardinality-02
FORMULA_NAME Angiogenesis-PT-15-LTLCardinality-03
FORMULA_NAME Angiogenesis-PT-15-LTLCardinality-04
FORMULA_NAME Angiogenesis-PT-15-LTLCardinality-05
FORMULA_NAME Angiogenesis-PT-15-LTLCardinality-06
FORMULA_NAME Angiogenesis-PT-15-LTLCardinality-07
FORMULA_NAME Angiogenesis-PT-15-LTLCardinality-08
FORMULA_NAME Angiogenesis-PT-15-LTLCardinality-09
FORMULA_NAME Angiogenesis-PT-15-LTLCardinality-10
FORMULA_NAME Angiogenesis-PT-15-LTLCardinality-11
FORMULA_NAME Angiogenesis-PT-15-LTLCardinality-12
FORMULA_NAME Angiogenesis-PT-15-LTLCardinality-13
FORMULA_NAME Angiogenesis-PT-15-LTLCardinality-14
FORMULA_NAME Angiogenesis-PT-15-LTLCardinality-15

=== Now, execution of the tool begins

BK_START 1552420394379

Working with output stream class java.io.PrintStream
Using solver Z3 to compute partial order matrices.
Built C files in :
/home/mcc/execution
Invoking ITS tools like this :CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.201903111103/bin/its-ltl-linux64, --gc-threshold, 2000000, -i, /home/mcc/execution/LTLCardinality.pnml.gal, -t, CGAL, -LTL, /home/mcc/execution/LTLCardinality.ltl, -c, -stutter-deadlock], workingDir=/home/mcc/execution]

its-ltl command run as :

/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.201903111103/bin/its-ltl-linux64 --gc-threshold 2000000 -i /home/mcc/execution/LTLCardinality.pnml.gal -t CGAL -LTL /home/mcc/execution/LTLCardinality.ltl -c -stutter-deadlock
Read 16 LTL properties
Checking formula 0 : !((G(X(("(P3k>=3)")U("(KdStarGStarP3kStarP2<=KdStarGP3)")))))
Formula 0 simplified : !GX("(P3k>=3)" U "(KdStarGStarP3kStarP2<=KdStarGP3)")
Presburger conditions satisfied. Using coverability to approximate state space in K-Induction.
// Phase 1: matrix 64 rows 39 cols
invariant :GStarP3kP3 + KdStarGStarP3k + KdStarGStarP3kP3 + KdStarGStarP3kStar + KdStarGStarP3kStarP2 + KdStarGStarP3kStarP3 + KdStarGStarP3kStarP3P2 + P3k = 15
invariant :Pten + PtP2 + PtP3 + PtP3P2 = 15
invariant :Akt + AktP3 + AktStar = 15
invariant :DAGE + Enz = 15
invariant :Gab1 + GP3 + GStarP3 + KdStarG + KdStarGP3 + KdStarGStar + KdStarGStarP3 + -1'KdStarPg + -1'KdStarPgStar + -1'KdStarPgStarP2 + -1'P3k + -1'Pg = -15
invariant :GStarPgP3 + KdStarGStarPg + KdStarGStarPgP3 + KdStarGStarPgStar + KdStarGStarPgStarP2 + KdStarGStarPgStarP3 + KdStarGStarPgStarP3P2 + KdStarPg + KdStarPgStar + KdStarPgStarP2 + Pg = 15
invariant :KdStar + KdStarG + KdStarGP3 + KdStarGStar + KdStarGStarP3 + KdStarGStarP3k + KdStarGStarP3kP3 + KdStarGStarP3kStar + KdStarGStarP3kStarP2 + KdStarGStarP3kStarP3 + KdStarGStarP3kStarP3P2 + KdStarGStarPg + KdStarGStarPgP3 + KdStarGStarPgStar + KdStarGStarPgStarP2 + KdStarGStarPgStarP3 + KdStarGStarPgStarP3P2 + KdStarPg + KdStarPgStar + KdStarPgStarP2 = 15
invariant :AktP3 + DAG + -1'Enz + -1'Gab1 + -1'KdStarG + -1'KdStarGStar + -1'KdStarGStarP3k + -1'KdStarGStarP3kStar + KdStarGStarP3kStarP3P2 + -1'KdStarGStarPg + -1'KdStarGStarPgStar + KdStarGStarPgStarP3P2 + KdStarPgStarP2 + Pip2 + Pip3 + PtP2 + PtP3 + 2'PtP3P2 = -15
Running compilation step : CommandLine [args=[gcc, -c, -I/home/mcc/BenchKit//lts_install_dir//include, -I., -std=c99, -fPIC, -O2, model.c], workingDir=/home/mcc/execution]
Compilation finished in 1702 ms.
Running link step : CommandLine [args=[gcc, -shared, -o, gal.so, model.o], workingDir=/home/mcc/execution]
Link finished in 322 ms.
Running LTSmin : CommandLine [args=[/home/mcc/BenchKit//lts_install_dir//bin/pins2lts-mc, ./gal.so, --threads=8, --when, --ltl, [](X(((LTLAP0==true))U((LTLAP1==true)))), --buchi-type=spotba], workingDir=/home/mcc/execution]
LTSmin run took 2077 ms.
FORMULA Angiogenesis-PT-15-LTLCardinality-00 FALSE TECHNIQUES PARTIAL_ORDER EXPLICIT LTSMIN SAT_SMT
Running LTSmin : CommandLine [args=[/home/mcc/BenchKit//lts_install_dir//bin/pins2lts-mc, ./gal.so, --threads=8, --when, --ltl, X(([]((LTLAP2==true)))U((LTLAP3==true))), --buchi-type=spotba], workingDir=/home/mcc/execution]
LTSmin run took 1010 ms.
FORMULA Angiogenesis-PT-15-LTLCardinality-01 TRUE TECHNIQUES PARTIAL_ORDER EXPLICIT LTSMIN SAT_SMT
Running LTSmin : CommandLine [args=[/home/mcc/BenchKit//lts_install_dir//bin/pins2lts-mc, ./gal.so, --threads=8, --when, --ltl, [](<>(X(X((LTLAP4==true))))), --buchi-type=spotba], workingDir=/home/mcc/execution]
LTSmin run took 5784 ms.
FORMULA Angiogenesis-PT-15-LTLCardinality-02 FALSE TECHNIQUES PARTIAL_ORDER EXPLICIT LTSMIN SAT_SMT
Running LTSmin : CommandLine [args=[/home/mcc/BenchKit//lts_install_dir//bin/pins2lts-mc, ./gal.so, --threads=8, --when, --ltl, X([](((LTLAP5==true))U((LTLAP6==true)))), --buchi-type=spotba], workingDir=/home/mcc/execution]
LTSmin run took 1502 ms.
FORMULA Angiogenesis-PT-15-LTLCardinality-03 FALSE TECHNIQUES PARTIAL_ORDER EXPLICIT LTSMIN SAT_SMT
Running LTSmin : CommandLine [args=[/home/mcc/BenchKit//lts_install_dir//bin/pins2lts-mc, ./gal.so, --threads=8, --when, --ltl, X((LTLAP7==true)), --buchi-type=spotba], workingDir=/home/mcc/execution]
LTSmin run took 521 ms.
FORMULA Angiogenesis-PT-15-LTLCardinality-04 TRUE TECHNIQUES PARTIAL_ORDER EXPLICIT LTSMIN SAT_SMT
Running LTSmin : CommandLine [args=[/home/mcc/BenchKit//lts_install_dir//bin/pins2lts-mc, ./gal.so, --threads=8, --when, --ltl, <>(<>(X(<>((LTLAP8==true))))), --buchi-type=spotba], workingDir=/home/mcc/execution]
LTSmin run took 523 ms.
FORMULA Angiogenesis-PT-15-LTLCardinality-05 TRUE TECHNIQUES PARTIAL_ORDER EXPLICIT LTSMIN SAT_SMT
Running LTSmin : CommandLine [args=[/home/mcc/BenchKit//lts_install_dir//bin/pins2lts-mc, ./gal.so, --threads=8, -p, --pins-guards, --when, --ltl, (((LTLAP9==true))U((LTLAP10==true)))U(<>((LTLAP11==true))), --buchi-type=spotba], workingDir=/home/mcc/execution]
LTSmin run took 354 ms.
FORMULA Angiogenesis-PT-15-LTLCardinality-06 FALSE TECHNIQUES PARTIAL_ORDER EXPLICIT LTSMIN SAT_SMT
Running LTSmin : CommandLine [args=[/home/mcc/BenchKit//lts_install_dir//bin/pins2lts-mc, ./gal.so, --threads=8, -p, --pins-guards, --when, --ltl, (LTLAP12==true), --buchi-type=spotba], workingDir=/home/mcc/execution]
LTSmin run took 185 ms.
FORMULA Angiogenesis-PT-15-LTLCardinality-07 FALSE TECHNIQUES PARTIAL_ORDER EXPLICIT LTSMIN SAT_SMT
Running LTSmin : CommandLine [args=[/home/mcc/BenchKit//lts_install_dir//bin/pins2lts-mc, ./gal.so, --threads=8, -p, --pins-guards, --when, --ltl, []((LTLAP13==true)), --buchi-type=spotba], workingDir=/home/mcc/execution]
LTSmin run took 251 ms.
FORMULA Angiogenesis-PT-15-LTLCardinality-08 FALSE TECHNIQUES PARTIAL_ORDER EXPLICIT LTSMIN SAT_SMT
Running LTSmin : CommandLine [args=[/home/mcc/BenchKit//lts_install_dir//bin/pins2lts-mc, ./gal.so, --threads=8, --when, --ltl, X(X((LTLAP14==true))), --buchi-type=spotba], workingDir=/home/mcc/execution]
LTSmin run took 356 ms.
FORMULA Angiogenesis-PT-15-LTLCardinality-09 TRUE TECHNIQUES PARTIAL_ORDER EXPLICIT LTSMIN SAT_SMT
Running LTSmin : CommandLine [args=[/home/mcc/BenchKit//lts_install_dir//bin/pins2lts-mc, ./gal.so, --threads=8, --when, --ltl, X((LTLAP15==true)), --buchi-type=spotba], workingDir=/home/mcc/execution]
LTSmin run took 314 ms.
FORMULA Angiogenesis-PT-15-LTLCardinality-10 TRUE TECHNIQUES PARTIAL_ORDER EXPLICIT LTSMIN SAT_SMT
Running LTSmin : CommandLine [args=[/home/mcc/BenchKit//lts_install_dir//bin/pins2lts-mc, ./gal.so, --threads=8, -p, --pins-guards, --when, --ltl, ((LTLAP16==true))U((LTLAP17==true)), --buchi-type=spotba], workingDir=/home/mcc/execution]
LTSmin run took 195 ms.
FORMULA Angiogenesis-PT-15-LTLCardinality-11 FALSE TECHNIQUES PARTIAL_ORDER EXPLICIT LTSMIN SAT_SMT
Running LTSmin : CommandLine [args=[/home/mcc/BenchKit//lts_install_dir//bin/pins2lts-mc, ./gal.so, --threads=8, --when, --ltl, [](<>(<>(X((LTLAP18==true))))), --buchi-type=spotba], workingDir=/home/mcc/execution]
LTSmin run took 1258 ms.
FORMULA Angiogenesis-PT-15-LTLCardinality-12 FALSE TECHNIQUES PARTIAL_ORDER EXPLICIT LTSMIN SAT_SMT
Running LTSmin : CommandLine [args=[/home/mcc/BenchKit//lts_install_dir//bin/pins2lts-mc, ./gal.so, --threads=8, --when, --ltl, <>([](<>(X((LTLAP19==true))))), --buchi-type=spotba], workingDir=/home/mcc/execution]
LTSmin run took 1396 ms.
FORMULA Angiogenesis-PT-15-LTLCardinality-13 FALSE TECHNIQUES PARTIAL_ORDER EXPLICIT LTSMIN SAT_SMT
Running LTSmin : CommandLine [args=[/home/mcc/BenchKit//lts_install_dir//bin/pins2lts-mc, ./gal.so, --threads=8, -p, --pins-guards, --when, --ltl, <>(([]((LTLAP20==true)))U([]((LTLAP21==true)))), --buchi-type=spotba], workingDir=/home/mcc/execution]
WARNING : LTSmin timed out (>225 s) on command CommandLine [args=[/home/mcc/BenchKit//lts_install_dir//bin/pins2lts-mc, ./gal.so, --threads=8, -p, --pins-guards, --when, --ltl, <>(([]((LTLAP20==true)))U([]((LTLAP21==true)))), --buchi-type=spotba], workingDir=/home/mcc/execution]
Running LTSmin : CommandLine [args=[/home/mcc/BenchKit//lts_install_dir//bin/pins2lts-mc, ./gal.so, --threads=8, -p, --pins-guards, --when, --ltl, <>(([]((LTLAP22==true)))U((LTLAP23==true))), --buchi-type=spotba], workingDir=/home/mcc/execution]
LTSmin run took 91 ms.
FORMULA Angiogenesis-PT-15-LTLCardinality-15 FALSE TECHNIQUES PARTIAL_ORDER EXPLICIT LTSMIN SAT_SMT
Retrying LTSmin with larger timeout 1800 s
Running LTSmin : CommandLine [args=[/home/mcc/BenchKit//lts_install_dir//bin/pins2lts-mc, ./gal.so, --threads=8, -p, --pins-guards, --when, --ltl, <>(([]((LTLAP20==true)))U([]((LTLAP21==true)))), --buchi-type=spotba], workingDir=/home/mcc/execution]
WARNING : LTS min runner thread failed on error :java.lang.RuntimeException: Unexpected exception when executing ltsmin :CommandLine [args=[/home/mcc/BenchKit//lts_install_dir//bin/pins2lts-mc, ./gal.so, --threads=8, -p, --pins-guards, --when, --ltl, <>(([]((LTLAP20==true)))U([]((LTLAP21==true)))), --buchi-type=spotba], workingDir=/home/mcc/execution]
255
Reverse transition relation is NOT exact ! Due to transitions k2, k55, k60, k7, Intersection with reachable at each step enabled. (destroyed/reverse/intersect/total) :0/60/4/64
Computing Next relation with stutter on 256 deadlock states
3 unique states visited
3 strongly connected components in search stack
4 transitions explored
3 items max in DFS search stack
139089 ticks for the emptiness check
Model ,|S| ,Time ,Mem(kb) ,fin. SDD ,fin. DDD ,peak SDD ,peak DDD ,SDD Hom ,SDD cache peak ,DDD Hom ,DDD cachepeak ,SHom cache
STATS,0,1390.93,7863660,1,0,78,3.9242e+07,26,54,1225,3.95173e+07,26
an accepting run exists (use option '-e' to print it)
Formula 0 is FALSE accepting run found.
FORMULA Angiogenesis-PT-15-LTLCardinality-00 FALSE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL
Checking formula 1 : !((X((G("(KdStarGStarP3>=2)"))U("(PtP3<=KdStarGStarP3kStarP2)"))))
Formula 1 simplified : !X(G"(KdStarGStarP3>=2)" U "(PtP3<=KdStarGStarP3kStarP2)")
Computing Next relation with stutter on 256 deadlock states
2 unique states visited
0 strongly connected components in search stack
1 transitions explored
2 items max in DFS search stack
10617 ticks for the emptiness check
Model ,|S| ,Time ,Mem(kb) ,fin. SDD ,fin. DDD ,peak SDD ,peak DDD ,SDD Hom ,SDD cache peak ,DDD Hom ,DDD cachepeak ,SHom cache
STATS,0,1497.1,7863792,1,0,78,3.9242e+07,37,54,1377,3.95173e+07,37
no accepting run found
Formula 1 is TRUE no accepting run found.
FORMULA Angiogenesis-PT-15-LTLCardinality-01 TRUE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL
Checking formula 2 : !((G(F(X(X("(Pip2>=1)"))))))
Formula 2 simplified : !GFXX"(Pip2>=1)"
Computing Next relation with stutter on 256 deadlock states
4 unique states visited
4 strongly connected components in search stack
5 transitions explored
4 items max in DFS search stack
12916 ticks for the emptiness check
Model ,|S| ,Time ,Mem(kb) ,fin. SDD ,fin. DDD ,peak SDD ,peak DDD ,SDD Hom ,SDD cache peak ,DDD Hom ,DDD cachepeak ,SHom cache
STATS,0,1626.25,7908248,1,0,78,4.47127e+07,46,54,1378,4.52592e+07,53
an accepting run exists (use option '-e' to print it)
Formula 2 is FALSE accepting run found.
FORMULA Angiogenesis-PT-15-LTLCardinality-02 FALSE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL
Checking formula 3 : !((X(G(("(KdStarGStarP3kStarP3P2<=KdStarPgStar)")U("(KdStarPgStar<=KdStarGStarPg)")))))
Formula 3 simplified : !XG("(KdStarGStarP3kStarP3P2<=KdStarPgStar)" U "(KdStarPgStar<=KdStarGStarPg)")
Computing Next relation with stutter on 256 deadlock states

BK_TIME_CONFINEMENT_REACHED

--------------------
content from stderr:

+ export BINDIR=/home/mcc/BenchKit/
+ BINDIR=/home/mcc/BenchKit/
++ pwd
+ export MODEL=/home/mcc/execution
+ MODEL=/home/mcc/execution
+ [[ LTLCardinality = StateSpace ]]
+ /home/mcc/BenchKit//runeclipse.sh /home/mcc/execution LTLCardinality -its -ltsminpath /home/mcc/BenchKit//lts_install_dir/ -smt
+ ulimit -s 65536
+ [[ -z '' ]]
+ export LTSMIN_MEM_SIZE=8589934592
+ LTSMIN_MEM_SIZE=8589934592
+ /home/mcc/BenchKit//itstools/its-tools -data /home/mcc/execution/workspace -pnfolder /home/mcc/execution -examination LTLCardinality -z3path /home/mcc/BenchKit//z3/bin/z3 -yices2path /home/mcc/BenchKit//yices/bin/yices -its -ltsminpath /home/mcc/BenchKit//lts_install_dir/ -smt -vmargs -Dosgi.locking=none -Declipse.stateSaveDelayInterval=-1 -Dosgi.configuration.area=/tmp/.eclipse -Xss8m -Xms40m -Xmx8192m -Dfile.encoding=UTF-8 -Dosgi.requiredJavaVersion=1.6
Mar 12, 2019 7:53:16 PM fr.lip6.move.gal.application.Application start
INFO: Running its-tools with arguments : [-pnfolder, /home/mcc/execution, -examination, LTLCardinality, -z3path, /home/mcc/BenchKit//z3/bin/z3, -yices2path, /home/mcc/BenchKit//yices/bin/yices, -its, -ltsminpath, /home/mcc/BenchKit//lts_install_dir/, -smt]
Mar 12, 2019 7:53:16 PM fr.lip6.move.gal.application.MccTranslator transformPNML
INFO: Parsing pnml file : /home/mcc/execution/model.pnml
Mar 12, 2019 7:53:16 PM fr.lip6.move.gal.nupn.PTNetReader loadFromXML
INFO: Load time of PNML (sax parser for PT used): 43 ms
Mar 12, 2019 7:53:16 PM fr.lip6.move.gal.pnml.togal.PTGALTransformer handlePage
INFO: Transformed 39 places.
Mar 12, 2019 7:53:17 PM fr.lip6.move.gal.pnml.togal.PTGALTransformer handlePage
INFO: Transformed 64 transitions.
Mar 12, 2019 7:53:17 PM fr.lip6.move.serialization.SerializationUtil systemToFile
INFO: Time to serialize gal into /home/mcc/execution/model.pnml.img.gal : 10 ms
Mar 12, 2019 7:53:17 PM fr.lip6.move.gal.instantiate.GALRewriter flatten
INFO: Flatten gal took : 56 ms
Mar 12, 2019 7:53:17 PM fr.lip6.move.serialization.SerializationUtil systemToFile
INFO: Time to serialize gal into /home/mcc/execution/LTLCardinality.pnml.gal : 22 ms
Mar 12, 2019 7:53:17 PM fr.lip6.move.serialization.SerializationUtil serializePropertiesForITSLTLTools
INFO: Time to serialize properties into /home/mcc/execution/LTLCardinality.ltl : 1 ms
Mar 12, 2019 7:53:17 PM fr.lip6.move.gal.semantics.DeterministicNextBuilder getDeterministicNext
INFO: Input system was already deterministic with 64 transitions.
Mar 12, 2019 7:53:17 PM fr.lip6.move.gal.gal2smt.bmc.KInductionSolver computeAndDeclareInvariants
INFO: Computed 8 place invariants in 19 ms
Mar 12, 2019 7:53:17 PM fr.lip6.move.gal.gal2smt.bmc.KInductionSolver init
INFO: Proved 39 variables to be positive in 95 ms
Mar 12, 2019 7:53:17 PM fr.lip6.move.gal.gal2smt.bmc.NecessaryEnablingsolver computeAblingMatrix
INFO: Computing symmetric may disable matrix : 64 transitions.
Mar 12, 2019 7:53:17 PM fr.lip6.move.gal.gal2smt.bmc.NecessaryEnablingsolver printStats
INFO: Computation of disable matrix completed :0/64 took 0 ms. Total solver calls (SAT/UNSAT): 0(0/0)
Mar 12, 2019 7:53:17 PM fr.lip6.move.gal.gal2smt.bmc.NecessaryEnablingsolver printStats
INFO: Computation of Complete disable matrix. took 3 ms. Total solver calls (SAT/UNSAT): 0(0/0)
Mar 12, 2019 7:53:17 PM fr.lip6.move.gal.gal2smt.bmc.NecessaryEnablingsolver computeAblingMatrix
INFO: Computing symmetric may enable matrix : 64 transitions.
Mar 12, 2019 7:53:17 PM fr.lip6.move.gal.gal2smt.bmc.NecessaryEnablingsolver printStats
INFO: Computation of Complete enable matrix. took 1 ms. Total solver calls (SAT/UNSAT): 0(0/0)
Mar 12, 2019 7:53:19 PM fr.lip6.move.gal.gal2smt.bmc.NecessaryEnablingsolver computeCoEnablingMatrix
INFO: Computing symmetric co enabling matrix : 64 transitions.
Mar 12, 2019 7:53:20 PM fr.lip6.move.gal.gal2smt.bmc.NecessaryEnablingsolver printStats
INFO: Computation of co-enabling matrix(8/64) took 1243 ms. Total solver calls (SAT/UNSAT): 393(393/0)
Mar 12, 2019 7:53:24 PM fr.lip6.move.gal.gal2smt.bmc.NecessaryEnablingsolver printStats
INFO: Computation of co-enabling matrix(18/64) took 4489 ms. Total solver calls (SAT/UNSAT): 778(778/0)
Mar 12, 2019 7:53:27 PM fr.lip6.move.gal.gal2smt.bmc.NecessaryEnablingsolver printStats
INFO: Computation of co-enabling matrix(27/64) took 7711 ms. Total solver calls (SAT/UNSAT): 1026(1026/0)
Mar 12, 2019 7:53:30 PM fr.lip6.move.gal.gal2smt.bmc.NecessaryEnablingsolver printStats
INFO: Computation of co-enabling matrix(32/64) took 10949 ms. Total solver calls (SAT/UNSAT): 1180(1180/0)
Mar 12, 2019 7:53:33 PM fr.lip6.move.gal.gal2smt.bmc.NecessaryEnablingsolver printStats
INFO: Computation of co-enabling matrix(44/64) took 13999 ms. Total solver calls (SAT/UNSAT): 1375(1375/0)
Mar 12, 2019 7:53:34 PM fr.lip6.move.gal.gal2smt.bmc.NecessaryEnablingsolver printStats
INFO: Computation of Finished co-enabling matrix. took 15090 ms. Total solver calls (SAT/UNSAT): 1437(1437/0)
Mar 12, 2019 7:53:34 PM fr.lip6.move.gal.gal2smt.bmc.NecessaryEnablingsolver computeDoNotAccord
INFO: Computing Do-Not-Accords matrix : 64 transitions.
Mar 12, 2019 7:53:44 PM fr.lip6.move.gal.gal2smt.bmc.NecessaryEnablingsolver printStats
INFO: Computation of Completed DNA matrix. took 9338 ms. Total solver calls (SAT/UNSAT): 371(0/371)
Mar 12, 2019 7:53:44 PM fr.lip6.move.gal.gal2pins.Gal2PinsTransformerNext transform
INFO: Built C files in 26719ms conformant to PINS in folder :/home/mcc/execution
pins2lts-mc, 0.000: Registering PINS so language module
pins2lts-mc( 0/ 8), 0.037: Loading model from ./gal.so
pins2lts-mc( 1/ 8), 0.037: library has no initializer
pins2lts-mc( 1/ 8), 0.037: loading model GAL
pins2lts-mc( 1/ 8), 0.038: completed loading model GAL
pins2lts-mc( 3/ 8), 0.041: library has no initializer
pins2lts-mc( 3/ 8), 0.041: loading model GAL
pins2lts-mc( 3/ 8), 0.041: completed loading model GAL
pins2lts-mc( 1/ 8), 0.042: LTL layer: formula: <>(([]((LTLAP20==true)))U([]((LTLAP21==true))))
pins2lts-mc( 2/ 8), 0.042: library has no initializer
pins2lts-mc( 2/ 8), 0.042: loading model GAL
pins2lts-mc( 7/ 8), 0.042: library has no initializer
pins2lts-mc( 1/ 8), 0.042: "<>(([]((LTLAP20==true)))U([]((LTLAP21==true))))" is not a file, parsing as formula...
pins2lts-mc( 4/ 8), 0.042: library has no initializer
pins2lts-mc( 5/ 8), 0.042: library has no initializer
pins2lts-mc( 5/ 8), 0.042: loading model GAL
pins2lts-mc( 1/ 8), 0.042: Using Spin LTL semantics
pins2lts-mc( 5/ 8), 0.043: completed loading model GAL
pins2lts-mc( 7/ 8), 0.042: loading model GAL
pins2lts-mc( 0/ 8), 0.043: library has no initializer
pins2lts-mc( 6/ 8), 0.042: library has no initializer
pins2lts-mc( 6/ 8), 0.045: loading model GAL
pins2lts-mc( 0/ 8), 0.045: loading model GAL
pins2lts-mc( 7/ 8), 0.044: completed loading model GAL
pins2lts-mc( 2/ 8), 0.045: completed loading model GAL
pins2lts-mc( 4/ 8), 0.042: loading model GAL
pins2lts-mc( 4/ 8), 0.046: completed loading model GAL
pins2lts-mc( 0/ 8), 0.050: completed loading model GAL
pins2lts-mc( 6/ 8), 0.050: completed loading model GAL
pins2lts-mc( 0/ 8), 0.051: Initializing POR dependencies: labels 88, guards 64
pins2lts-mc( 0/ 8), 0.093: Forcing use of the an ignoring proviso (cndfs)
pins2lts-mc( 0/ 8), 0.150: There are 89 state labels and 1 edge labels
pins2lts-mc( 0/ 8), 0.150: State length is 40, there are 68 groups
pins2lts-mc( 0/ 8), 0.150: Running cndfs using 8 cores
pins2lts-mc( 0/ 8), 0.150: Using a tree table with 2^27 elements
pins2lts-mc( 0/ 8), 0.150: Successor permutation: dynamic
pins2lts-mc( 0/ 8), 0.150: Visible groups: 0 / 68, labels: 1 / 89
pins2lts-mc( 0/ 8), 0.150: POR cycle proviso: cndfs (ltl)
pins2lts-mc( 0/ 8), 0.150: Global bits: 2, count bits: 2, local bits: 0
pins2lts-mc( 6/ 8), 0.192: [Blue] ~120 levels ~960 states ~1480 transitions
pins2lts-mc( 6/ 8), 0.234: [Blue] ~239 levels ~1920 states ~2736 transitions
pins2lts-mc( 6/ 8), 0.278: [Blue] ~479 levels ~3840 states ~5600 transitions
pins2lts-mc( 6/ 8), 0.961: [Blue] ~959 levels ~7680 states ~11672 transitions
pins2lts-mc( 6/ 8), 1.559: [Blue] ~1919 levels ~15360 states ~23568 transitions
pins2lts-mc( 0/ 8), 2.816: [Blue] ~3769 levels ~30720 states ~82848 transitions
pins2lts-mc( 0/ 8), 4.206: [Blue] ~7570 levels ~61440 states ~161672 transitions
pins2lts-mc( 5/ 8), 6.675: [Blue] ~15317 levels ~122880 states ~214160 transitions
pins2lts-mc( 5/ 8), 10.403: [Blue] ~30655 levels ~245760 states ~413600 transitions
pins2lts-mc( 5/ 8), 17.741: [Blue] ~61300 levels ~491520 states ~847216 transitions
pins2lts-mc( 5/ 8), 30.987: [Blue] ~122559 levels ~983040 states ~1577696 transitions
pins2lts-mc( 5/ 8), 51.837: [Blue] ~245124 levels ~1966080 states ~3141920 transitions
pins2lts-mc( 5/ 8), 94.388: [Blue] ~489871 levels ~3932160 states ~6383336 transitions
pins2lts-mc( 5/ 8), 181.871: [Blue] ~969640 levels ~7864320 states ~14339832 transitions
pins2lts-mc( 5/ 8), 380.634: [Blue] ~1919982 levels ~15728640 states ~30866120 transitions
pins2lts-mc( 5/ 8), 792.851: [Blue] ~3825323 levels ~31457280 states ~63896752 transitions
pins2lts-mc( 5/ 8), 1036.897: Error: tree leafs table full! Change -s/--ratio.
pins2lts-mc( 0/ 8), 1037.018:
pins2lts-mc( 0/ 8), 1037.018: Explored 34733362 states 81962886 transitions, fanout: 2.360
pins2lts-mc( 0/ 8), 1037.018: Total exploration time 1036.860 sec (1036.720 sec minimum, 1036.777 sec on average)
pins2lts-mc( 0/ 8), 1037.018: States per second: 33499, Transitions per second: 79049
pins2lts-mc( 0/ 8), 1037.018:
pins2lts-mc( 0/ 8), 1037.018: State space has 88021497 states, 0 are accepting
pins2lts-mc( 0/ 8), 1037.018: cndfs_1 (permutation: dynamic) stats:
pins2lts-mc( 0/ 8), 1037.018: blue states: 34733362 (39.46%), transitions: 0 (per worker)
pins2lts-mc( 0/ 8), 1037.018: red states: 0 (0.00%), bogus: 0 (0.00%), transitions: 0, waits: 0 (0.00 sec)
pins2lts-mc( 0/ 8), 1037.018: all-red states: 0 (0.00%), bogus 0 (0.00%)
pins2lts-mc( 0/ 8), 1037.018:
pins2lts-mc( 0/ 8), 1037.018: Total memory used for local state coloring: 526.8MB
pins2lts-mc( 0/ 8), 1037.018:
pins2lts-mc( 0/ 8), 1037.018: Queue width: 8B, total height: 34521583, memory: 263.38MB
pins2lts-mc( 0/ 8), 1037.018: Tree memory: 927.6MB, 11.0 B/state, compr.: 6.8%
pins2lts-mc( 0/ 8), 1037.018: Tree fill ratio (roots/leafs): 65.0%/99.0%
pins2lts-mc( 0/ 8), 1037.018: Stored 64 string chucks using 0MB
pins2lts-mc( 0/ 8), 1037.018: Total memory used for chunk indexing: 0MB
pins2lts-mc( 0/ 8), 1037.018: Est. total memory use: 1190.9MB (~1287.4MB paged-in)
java.lang.RuntimeException: Unexpected exception when executing ltsmin :CommandLine [args=[/home/mcc/BenchKit//lts_install_dir//bin/pins2lts-mc, ./gal.so, --threads=8, -p, --pins-guards, --when, --ltl, <>(([]((LTLAP20==true)))U([]((LTLAP21==true)))), --buchi-type=spotba], workingDir=/home/mcc/execution]
255
at fr.lip6.move.gal.application.LTSminRunner.checkProperty(LTSminRunner.java:167)
at fr.lip6.move.gal.application.LTSminRunner.access$9(LTSminRunner.java:122)
at fr.lip6.move.gal.application.LTSminRunner$1.run(LTSminRunner.java:98)
at java.lang.Thread.run(Thread.java:748)

Sequence of Actions to be Executed by the VM

This is useful if one wants to reexecute the tool in the VM from the submitted image disk.

set -x
# this is for BenchKit: configuration of major elements for the test
export BK_INPUT="Angiogenesis-PT-15"
export BK_EXAMINATION="LTLCardinality"
export BK_TOOL="itstools"
export BK_RESULT_DIR="/tmp/BK_RESULTS/OUTPUTS"
export BK_TIME_CONFINEMENT="3600"
export BK_MEMORY_CONFINEMENT="16384"

# this is specific to your benchmark or test

export BIN_DIR="$HOME/BenchKit/bin"

# remove the execution directoty if it exists (to avoid increse of .vmdk images)
if [ -d execution ] ; then
rm -rf execution
fi

# this is for BenchKit: explicit launching of the test
echo "====================================================================="
echo " Generated by BenchKit 2-3954"
echo " Executing tool itstools"
echo " Input is Angiogenesis-PT-15, examination is LTLCardinality"
echo " Time confinement is $BK_TIME_CONFINEMENT seconds"
echo " Memory confinement is 16384 MBytes"
echo " Number of cores is 4"
echo " Run identifier is r019-csrt-155225079800033"
echo "====================================================================="
echo
echo "--------------------"
echo "preparation of the directory to be used:"

tar xzf /home/mcc/BenchKit/INPUTS/Angiogenesis-PT-15.tgz
mv Angiogenesis-PT-15 execution
cd execution
if [ "LTLCardinality" = "GlobalProperties" ] ; then
rm -f GenericPropertiesVerdict.xml
fi
if [ "LTLCardinality" = "UpperBounds" ] ; then
rm -f GenericPropertiesVerdict.xml
fi
pwd
ls -lh

echo
echo "--------------------"
echo "content from stdout:"
echo
echo "=== Data for post analysis generated by BenchKit (invocation template)"
echo
if [ "LTLCardinality" = "UpperBounds" ] ; then
echo "The expected result is a vector of positive values"
echo NUM_VECTOR
elif [ "LTLCardinality" != "StateSpace" ] ; then
echo "The expected result is a vector of booleans"
echo BOOL_VECTOR
else
echo "no data necessary for post analysis"
fi
echo
if [ -f "LTLCardinality.txt" ] ; then
echo "here is the order used to build the result vector(from text file)"
for x in $(grep Property LTLCardinality.txt | cut -d ' ' -f 2 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ -f "LTLCardinality.xml" ] ; then # for cunf (txt files deleted;-)
echo echo "here is the order used to build the result vector(from xml file)"
for x in $(grep '' LTLCardinality.xml | cut -d '>' -f 2 | cut -d '<' -f 1 | sort -u) ; do
echo "FORMULA_NAME $x"
done
fi
echo
echo "=== Now, execution of the tool begins"
echo
echo -n "BK_START "
date -u +%s%3N
echo
timeout -s 9 $BK_TIME_CONFINEMENT bash -c "/home/mcc/BenchKit/BenchKit_head.sh 2> STDERR ; echo ; echo -n \"BK_STOP \" ; date -u +%s%3N"
if [ $? -eq 137 ] ; then
echo
echo "BK_TIME_CONFINEMENT_REACHED"
fi
echo
echo "--------------------"
echo "content from stderr:"
echo
cat STDERR ;