Execution Chart

We display below the execution chart for this examination (boot time has been removed).

Trace from the execution

Waiting for the VM to be ready (probing ssh)
......................
/home/mcc/execution
total 328K
-rw-r--r-- 1 mcc users 3.6K May 30 21:16 CTLCardinality.txt
-rw-r--r-- 1 mcc users 20K May 30 21:16 CTLCardinality.xml
-rw-r--r-- 1 mcc users 2.5K May 29 15:09 CTLFireability.txt
-rw-r--r-- 1 mcc users 16K May 29 15:09 CTLFireability.xml
-rw-r--r-- 1 mcc users 4.0K May 24 11:17 GenericPropertiesDefinition.xml
-rw-r--r-- 1 mcc users 5.8K May 24 11:17 GenericPropertiesVerdict.xml
-rw-r--r-- 1 mcc users 2.4K May 28 09:49 LTLCardinality.txt
-rw-r--r-- 1 mcc users 11K May 28 09:49 LTLCardinality.xml
-rw-r--r-- 1 mcc users 1.8K May 28 08:03 LTLFireability.txt
-rw-r--r-- 1 mcc users 7.5K May 28 08:03 LTLFireability.xml
-rw-r--r-- 1 mcc users 1 May 24 11:17 NewModel
-rw-r--r-- 1 mcc users 3.3K May 28 06:20 ReachabilityCardinality.txt
-rw-r--r-- 1 mcc users 16K May 28 06:20 ReachabilityCardinality.xml
-rw-r--r-- 1 mcc users 112 May 26 06:29 ReachabilityDeadlock.txt
-rw-r--r-- 1 mcc users 350 May 26 06:29 ReachabilityDeadlock.xml
-rw-r--r-- 1 mcc users 2.7K May 27 03:45 ReachabilityFireability.txt
-rw-r--r-- 1 mcc users 16K May 27 03:45 ReachabilityFireability.xml
-rw-r--r-- 1 mcc users 1.7K May 28 07:31 UpperBounds.txt
-rw-r--r-- 1 mcc users 3.7K May 28 07:31 UpperBounds.xml
-rw-r--r-- 1 mcc users 6 May 24 11:17 equiv_col
-rw-r--r-- 1 mcc users 4 May 24 11:17 instance
-rw-r--r-- 1 mcc users 6 May 24 11:17 iscolored
-rw-r--r-- 1 mcc users 169K May 24 11:17 model.pnml
=====================================================================
Generated by BenchKit 2-3637
Executing tool itstoolsl
Input is DoubleExponent-PT-010, examination is ReachabilityDeadlock
Time confinement is 3600 seconds
Memory confinement is 16384 MBytes
Number of cores is 4
Run identifier is r285-csrt-152749175900224
=====================================================================

--------------------
content from stdout:

=== Data for post analysis generated by BenchKit (invocation template)

The expected result is a vector of booleans
BOOL_VECTOR

here is the order used to build the result vector(from text file)
FORMULA_NAME DoubleExponent-PT-010-ReachabilityDeadlock-0

=== Now, execution of the tool begins

BK_START 1527987178943

Flatten gal took : 118 ms
Constant places removed 5 places and 1 transitions.
Performed 193 Post agglomeration using F-continuation condition.
Iterating post reduction 0 with 198 rules applied. Total rules applied 198 place count 529 transition count 304
Constant places removed 194 places and 1 transitions.
Iterating post reduction 1 with 194 rules applied. Total rules applied 392 place count 335 transition count 303
Performed 18 Pre agglomeration using Quasi-Persistent + HF-interchangeable + Divergent Free condition.
Pre-agglomeration after 2 with 18 Pre rules applied. Total rules applied 392 place count 335 transition count 285
Constant places removed 18 places and 0 transitions.
Iterating post reduction 2 with 18 rules applied. Total rules applied 410 place count 317 transition count 285
Performed 22 Post agglomeration using F-continuation condition.
Constant places removed 22 places and 0 transitions.
Iterating post reduction 3 with 22 rules applied. Total rules applied 432 place count 295 transition count 263
Performed 18 Post agglomeration using F-continuation condition.
Constant places removed 18 places and 0 transitions.
Iterating post reduction 4 with 18 rules applied. Total rules applied 450 place count 277 transition count 263
Applied a total of 450 rules in 223 ms. Remains 277 /534 variables (removed 257) and now considering 263/498 (removed 235) transitions.
// Phase 1: matrix 263 rows 277 cols
Using solver Z3 to compute partial order matrices.
Built C files in :
/home/mcc/execution
Presburger conditions satisfied. Using coverability to approximate state space in K-Induction.
// Phase 1: matrix 263 rows 277 cols
Converted graph to binary with : CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.louvain.binaries_1.0.0.201805241334/bin/convert-linux64, -i, /tmp/graph8362985383313289293.txt, -o, /tmp/graph8362985383313289293.bin, -w, /tmp/graph8362985383313289293.weights], workingDir=null]
Built communities with : CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.louvain.binaries_1.0.0.201805241334/bin/louvain-linux64, /tmp/graph8362985383313289293.bin, -l, -1, -v, -w, /tmp/graph8362985383313289293.weights, -q, 0, -e, 0.001], workingDir=null]
invariant :p426 + -1'p427 + p429 + -1'p430 = 0
invariant :-1'p427 + p428 + -1'p430 + p431 + -1'p452 + -1'p464 = 0
invariant :-1'p479 + p481 + -1'p482 + p484 + -1'p505 + -1'p517 = 0
invariant :p214 + -1'p215 + p217 + -1'p218 = 0
invariant :p12 + p13 + -1'p34 + -1'p46 = 2
invariant :-1'p215 + p216 + -1'p218 + p219 + -1'p240 + -1'p252 = 0
invariant :-1'p162 + p163 + -1'p165 + p166 + -1'p187 + -1'p199 = 0
invariant :-1'p321 + p322 + -1'p324 + p325 + -1'p346 + -1'p358 = 0
invariant :p55 + -1'p56 + p58 + -1'p59 = 0
invariant :p104 + p22 + -1'p28 + -1'p30 + -1'p31 + -1'p34 + -1'p36 + -1'p37 = 0
invariant :-1'p493 + p499 + p501 + p502 + p505 + p507 + p508 = 0
invariant :-1'p109 + p110 + -1'p112 + p113 + -1'p134 + -1'p146 = 0
invariant :p267 + -1'p268 + p270 + -1'p271 = 0
invariant :p373 + -1'p374 + p376 + -1'p377 = 0
invariant :-1'p479 + p480 + -1'p482 + p483 = 0
invariant :-1'p175 + p181 + p183 + p184 + p187 + p189 + p190 + -1'p263 = 0
invariant :-1'p56 + p57 + -1'p59 + p60 + -1'p81 + -1'p93 = 0
invariant :-1'p268 + p269 + -1'p271 + p272 + -1'p293 + -1'p305 = 0
invariant :p108 + -1'p109 + p111 + -1'p112 = 0
invariant :p161 + -1'p162 + p164 + -1'p165 = 0
invariant :-1'p387 + p393 + p395 + p396 + p399 + p401 + p402 + -1'p475 = 0
invariant :-1'p374 + p375 + -1'p377 + p378 + -1'p399 + -1'p411 = 0
invariant :p320 + -1'p321 + p323 + -1'p324 = 0
invariant :p10 + p11 = 2
invariant :p122 + -1'p128 + -1'p130 + -1'p131 + -1'p134 + -1'p136 + -1'p137 + p210 = 0
invariant :p157 + p69 + -1'p75 + -1'p77 + -1'p78 + -1'p81 + -1'p83 + -1'p84 = 0
invariant :-1'p334 + p340 + p342 + p343 + p346 + p348 + p349 + -1'p422 = 0
invariant :p8 + p9 = 2
invariant :p281 + -1'p287 + -1'p289 + -1'p290 + -1'p293 + -1'p295 + -1'p296 + p369 = 0
Invoking ITS tools like this :CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.201805241334/bin/its-ctl-linux64, --gc-threshold, 2000000, --quiet, -i, /home/mcc/execution/ReachabilityDeadlock.pnml.gal, -t, CGAL, -ctl, DEADLOCK], workingDir=/home/mcc/execution]

its-ctl command run as :

/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.201805241334/bin/its-ctl-linux64 --gc-threshold 2000000 --quiet -i /home/mcc/execution/ReachabilityDeadlock.pnml.gal -t CGAL -ctl DEADLOCK
No direction supplied, using forward translation only.
built 14 ordering constraints for composite.
built 44 ordering constraints for composite.
built 46 ordering constraints for composite.
built 47 ordering constraints for composite.
built 51 ordering constraints for composite.
built 47 ordering constraints for composite.
built 37 ordering constraints for composite.
built 42 ordering constraints for composite.
Running compilation step : CommandLine [args=[gcc, -c, -I/home/mcc/BenchKit//lts_install_dir//include, -I., -std=c99, -fPIC, -O3, model.c], workingDir=/home/mcc/execution]
Compilation finished in 4620 ms.
Running link step : CommandLine [args=[gcc, -shared, -o, gal.so, model.o], workingDir=/home/mcc/execution]
Link finished in 139 ms.
Running LTSmin : CommandLine [args=[/home/mcc/BenchKit//lts_install_dir//bin/pins2lts-mc, ./gal.so, --threads=1, -p, --pins-guards, --when, -d], workingDir=/home/mcc/execution]
LTSmin run took 160 ms.
FORMULA DoubleExponent-PT-010-ReachabilityDeadlock-0 TRUE TECHNIQUES PARTIAL_ORDER EXPLICIT LTSMIN SAT_SMT
ITS tools runner thread asked to quit. Dying gracefully.

BK_STOP 1527987256539

--------------------
content from stderr:

+ export BINDIR=/home/mcc/BenchKit/
+ BINDIR=/home/mcc/BenchKit/
++ pwd
+ export MODEL=/home/mcc/execution
+ MODEL=/home/mcc/execution
+ /home/mcc/BenchKit//runeclipse.sh /home/mcc/execution ReachabilityDeadlock -its -ltsminpath /home/mcc/BenchKit//lts_install_dir/ -louvain -smt
+ ulimit -s 65536
+ [[ -z '' ]]
+ export LTSMIN_MEM_SIZE=8589934592
+ LTSMIN_MEM_SIZE=8589934592
+ /home/mcc/BenchKit//itstools/its-tools -consoleLog -data /home/mcc/execution/workspace -pnfolder /home/mcc/execution -examination ReachabilityDeadlock -z3path /home/mcc/BenchKit//z3/bin/z3 -yices2path /home/mcc/BenchKit//yices/bin/yices -its -ltsminpath /home/mcc/BenchKit//lts_install_dir/ -louvain -smt -vmargs -Dosgi.locking=none -Declipse.stateSaveDelayInterval=-1 -Dosgi.configuration.area=/tmp/.eclipse -Xss8m -Xms40m -Xmx8192m -Dfile.encoding=UTF-8 -Dosgi.requiredJavaVersion=1.6
Jun 03, 2018 12:53:00 AM fr.lip6.move.gal.application.Application start
INFO: Running its-tools with arguments : [-pnfolder, /home/mcc/execution, -examination, ReachabilityDeadlock, -z3path, /home/mcc/BenchKit//z3/bin/z3, -yices2path, /home/mcc/BenchKit//yices/bin/yices, -its, -ltsminpath, /home/mcc/BenchKit//lts_install_dir/, -louvain, -smt]
Jun 03, 2018 12:53:00 AM fr.lip6.move.gal.application.MccTranslator transformPNML
INFO: Parsing pnml file : /home/mcc/execution/model.pnml
Jun 03, 2018 12:53:01 AM fr.lip6.move.gal.nupn.PTNetReader loadFromXML
INFO: Load time of PNML (sax parser for PT used): 99 ms
Jun 03, 2018 12:53:01 AM fr.lip6.move.gal.pnml.togal.PTGALTransformer handlePage
INFO: Transformed 534 places.
Jun 03, 2018 12:53:01 AM fr.lip6.move.gal.pnml.togal.PTGALTransformer handlePage
INFO: Transformed 498 transitions.
Jun 03, 2018 12:53:01 AM fr.lip6.move.serialization.SerializationUtil systemToFile
INFO: Time to serialize gal into /home/mcc/execution/model.pnml.img.gal : 25 ms
Jun 03, 2018 12:53:01 AM fr.lip6.move.gal.instantiate.GALRewriter flatten
INFO: Flatten gal took : 115 ms
Jun 03, 2018 12:53:01 AM fr.lip6.move.serialization.SerializationUtil systemToFile
INFO: Time to serialize gal into /home/mcc/execution/model.pnml.simple.gal : 13 ms
Jun 03, 2018 12:53:01 AM fr.lip6.move.gal.semantics.DeterministicNextBuilder getDeterministicNext
INFO: Input system was already deterministic with 498 transitions.
Jun 03, 2018 12:53:02 AM fr.lip6.move.gal.application.MccTranslator applyOrder
INFO: Applying decomposition
Jun 03, 2018 12:53:02 AM fr.lip6.move.gal.instantiate.GALRewriter flatten
INFO: Flatten gal took : 60 ms
Jun 03, 2018 12:53:02 AM fr.lip6.move.gal.semantics.DeterministicNextBuilder getDeterministicNext
INFO: Input system was already deterministic with 263 transitions.
Jun 03, 2018 12:53:02 AM fr.lip6.move.gal.instantiate.GALRewriter flatten
INFO: Flatten gal took : 35 ms
Begin: Sun Jun 3 00:53:02 2018

Computation of communities with the Newman-Girvan Modularity quality function

level 0:
start computation: Sun Jun 3 00:53:02 2018
network size: 277 nodes, 1528 links, 524 weight
quality increased from -0.00392666 to 0.389368
end computation: Sun Jun 3 00:53:02 2018
level 1:
start computation: Sun Jun 3 00:53:02 2018
network size: 99 nodes, 845 links, 524 weight
quality increased from 0.389368 to 0.682741
end computation: Sun Jun 3 00:53:02 2018
level 2:
start computation: Sun Jun 3 00:53:02 2018
network size: 15 nodes, 71 links, 524 weight
quality increased from 0.682741 to 0.720516
end computation: Sun Jun 3 00:53:02 2018
level 3:
start computation: Sun Jun 3 00:53:02 2018
network size: 7 nodes, 21 links, 524 weight
quality increased from 0.720516 to 0.720516
end computation: Sun Jun 3 00:53:02 2018
End: Sun Jun 3 00:53:02 2018
Total duration: 0 sec
0.720516
Jun 03, 2018 12:53:02 AM fr.lip6.move.gal.instantiate.CompositeBuilder decomposeWithOrder
INFO: Decomposing Gal with order
Jun 03, 2018 12:53:02 AM fr.lip6.move.gal.gal2smt.bmc.KInductionSolver computeAndDeclareInvariants
INFO: Computed 29 place invariants in 56 ms
Jun 03, 2018 12:53:02 AM fr.lip6.move.gal.instantiate.GALRewriter flatten
INFO: Flatten gal took : 34 ms
Jun 03, 2018 12:53:02 AM fr.lip6.move.gal.instantiate.CompositeBuilder rewriteArraysToAllowPartition
INFO: Rewriting arrays to variables to allow decomposition.
Jun 03, 2018 12:53:02 AM fr.lip6.move.gal.instantiate.Instantiator fuseIsomorphicEffects
INFO: Removed a total of 191 redundant transitions.
Jun 03, 2018 12:53:02 AM fr.lip6.move.serialization.SerializationUtil systemToFile
INFO: Time to serialize gal into /home/mcc/execution/ReachabilityDeadlock.pnml.gal : 7 ms
Jun 03, 2018 12:53:03 AM fr.lip6.move.gal.gal2smt.bmc.KInductionSolver init
INFO: Proved 277 variables to be positive in 918 ms
Jun 03, 2018 12:53:03 AM fr.lip6.move.gal.gal2smt.bmc.NecessaryEnablingsolver computeAblingMatrix
INFO: Computing symmetric may disable matrix : 263 transitions.
Jun 03, 2018 12:53:03 AM fr.lip6.move.gal.gal2smt.bmc.NecessaryEnablingsolver printStats
INFO: Computation of disable matrix completed :0/263 took 0 ms. Total solver calls (SAT/UNSAT): 0(0/0)
Jun 03, 2018 12:53:03 AM fr.lip6.move.gal.gal2smt.bmc.NecessaryEnablingsolver printStats
INFO: Computation of Complete disable matrix. took 23 ms. Total solver calls (SAT/UNSAT): 0(0/0)
Jun 03, 2018 12:53:03 AM fr.lip6.move.gal.gal2smt.bmc.NecessaryEnablingsolver computeAblingMatrix
INFO: Computing symmetric may enable matrix : 263 transitions.
Jun 03, 2018 12:53:03 AM fr.lip6.move.gal.gal2smt.bmc.NecessaryEnablingsolver printStats
INFO: Computation of Complete enable matrix. took 24 ms. Total solver calls (SAT/UNSAT): 0(0/0)
Jun 03, 2018 12:53:03 AM fr.lip6.move.gal.gal2smt.bmc.NecessaryEnablingsolver computeCoEnablingMatrix
INFO: Computing symmetric co enabling matrix : 263 transitions.
Jun 03, 2018 12:53:06 AM fr.lip6.move.gal.gal2smt.bmc.NecessaryEnablingsolver printStats
INFO: Computation of co-enabling matrix(171/263) took 2998 ms. Total solver calls (SAT/UNSAT): 994(994/0)
Jun 03, 2018 12:53:07 AM fr.lip6.move.gal.gal2smt.bmc.NecessaryEnablingsolver printStats
INFO: Computation of Finished co-enabling matrix. took 4295 ms. Total solver calls (SAT/UNSAT): 1175(1175/0)
Jun 03, 2018 12:53:07 AM fr.lip6.move.gal.gal2smt.bmc.NecessaryEnablingsolver computeDoNotAccord
INFO: Computing Do-Not-Accords matrix : 263 transitions.
Jun 03, 2018 12:54:11 AM fr.lip6.move.gal.gal2smt.bmc.NecessaryEnablingsolver printStats
INFO: Computation of Completed DNA matrix. took 63449 ms. Total solver calls (SAT/UNSAT): 1071(0/1071)
Jun 03, 2018 12:54:11 AM fr.lip6.move.gal.gal2pins.Gal2PinsTransformerNext transform
INFO: Built C files in 69026ms conformant to PINS in folder :/home/mcc/execution

Sequence of Actions to be Executed by the VM

This is useful if one wants to reexecute the tool in the VM from the submitted image disk.

set -x
# this is for BenchKit: configuration of major elements for the test
export BK_INPUT="DoubleExponent-PT-010"
export BK_EXAMINATION="ReachabilityDeadlock"
export BK_TOOL="itstoolsl"
export BK_RESULT_DIR="/tmp/BK_RESULTS/OUTPUTS"
export BK_TIME_CONFINEMENT="3600"
export BK_MEMORY_CONFINEMENT="16384"

# this is specific to your benchmark or test

export BIN_DIR="$HOME/BenchKit/bin"

# remove the execution directoty if it exists (to avoid increse of .vmdk images)
if [ -d execution ] ; then
rm -rf execution
fi

tar xzf /home/mcc/BenchKit/INPUTS/DoubleExponent-PT-010.tgz
mv DoubleExponent-PT-010 execution
cd execution
pwd
ls -lh

# this is for BenchKit: explicit launching of the test
echo "====================================================================="
echo " Generated by BenchKit 2-3637"
echo " Executing tool itstoolsl"
echo " Input is DoubleExponent-PT-010, examination is ReachabilityDeadlock"
echo " Time confinement is $BK_TIME_CONFINEMENT seconds"
echo " Memory confinement is 16384 MBytes"
echo " Number of cores is 4"
echo " Run identifier is r285-csrt-152749175900224"
echo "====================================================================="
echo
echo "--------------------"
echo "content from stdout:"
echo
echo "=== Data for post analysis generated by BenchKit (invocation template)"
echo
if [ "ReachabilityDeadlock" = "UpperBounds" ] ; then
echo "The expected result is a vector of positive values"
echo NUM_VECTOR
elif [ "ReachabilityDeadlock" != "StateSpace" ] ; then
echo "The expected result is a vector of booleans"
echo BOOL_VECTOR
else
echo "no data necessary for post analysis"
fi
echo
if [ -f "ReachabilityDeadlock.txt" ] ; then
echo "here is the order used to build the result vector(from text file)"
for x in $(grep Property ReachabilityDeadlock.txt | cut -d ' ' -f 2 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ -f "ReachabilityDeadlock.xml" ] ; then # for cunf (txt files deleted;-)
echo echo "here is the order used to build the result vector(from xml file)"
for x in $(grep '' ReachabilityDeadlock.xml | cut -d '>' -f 2 | cut -d '<' -f 1 | sort -u) ; do
echo "FORMULA_NAME $x"
done
fi
echo
echo "=== Now, execution of the tool begins"
echo
echo -n "BK_START "
date -u +%s%3N
echo
timeout -s 9 $BK_TIME_CONFINEMENT bash -c "/home/mcc/BenchKit/BenchKit_head.sh 2> STDERR ; echo ; echo -n \"BK_STOP \" ; date -u +%s%3N"
if [ $? -eq 137 ] ; then
echo
echo "BK_TIME_CONFINEMENT_REACHED"
fi
echo
echo "--------------------"
echo "content from stderr:"
echo
cat STDERR ;