Execution Chart

We display below the execution chart for this examination (boot time has been removed).

Trace from the execution

Waiting for the VM to be ready (probing ssh)
...................
/home/mcc/execution
total 176K
-rw-r--r-- 1 mcc users 3.2K May 15 18:54 CTLCardinality.txt
-rw-r--r-- 1 mcc users 17K May 15 18:54 CTLCardinality.xml
-rw-r--r-- 1 mcc users 2.4K May 15 18:54 CTLFireability.txt
-rw-r--r-- 1 mcc users 13K May 15 18:54 CTLFireability.xml
-rw-r--r-- 1 mcc users 4.0K May 15 18:49 GenericPropertiesDefinition.xml
-rw-r--r-- 1 mcc users 6.2K May 15 18:49 GenericPropertiesVerdict.xml
-rw-r--r-- 1 mcc users 2.4K May 26 09:26 LTLCardinality.txt
-rw-r--r-- 1 mcc users 11K May 26 09:26 LTLCardinality.xml
-rw-r--r-- 1 mcc users 2.0K May 26 09:26 LTLFireability.txt
-rw-r--r-- 1 mcc users 8.8K May 26 09:26 LTLFireability.xml
-rw-r--r-- 1 mcc users 3.8K May 15 18:54 ReachabilityCardinality.txt
-rw-r--r-- 1 mcc users 19K May 15 18:54 ReachabilityCardinality.xml
-rw-r--r-- 1 mcc users 115 May 15 18:54 ReachabilityDeadlock.txt
-rw-r--r-- 1 mcc users 353 May 15 18:54 ReachabilityDeadlock.xml
-rw-r--r-- 1 mcc users 3.3K May 15 18:54 ReachabilityFireability.txt
-rw-r--r-- 1 mcc users 19K May 15 18:54 ReachabilityFireability.xml
-rw-r--r-- 1 mcc users 1.7K May 15 18:54 UpperBounds.txt
-rw-r--r-- 1 mcc users 3.7K May 15 18:54 UpperBounds.xml
-rw-r--r-- 1 mcc users 6 May 15 18:49 equiv_col
-rw-r--r-- 1 mcc users 7 May 15 18:49 instance
-rw-r--r-- 1 mcc users 6 May 15 18:49 iscolored
-rw-r--r-- 1 mcc users 11K May 15 18:49 model.pnml
=====================================================================
Generated by BenchKit 2-3637
Executing tool itstoolsl
Input is CircadianClock-PT-010000, examination is LTLCardinality
Time confinement is 3600 seconds
Memory confinement is 16384 MBytes
Number of cores is 4
Run identifier is r225-ebro-152732379700145
=====================================================================

--------------------
content from stdout:

=== Data for post analysis generated by BenchKit (invocation template)

The expected result is a vector of booleans
BOOL_VECTOR

here is the order used to build the result vector(from text file)
FORMULA_NAME CircadianClock-PT-010000-LTLCardinality-00
FORMULA_NAME CircadianClock-PT-010000-LTLCardinality-01
FORMULA_NAME CircadianClock-PT-010000-LTLCardinality-02
FORMULA_NAME CircadianClock-PT-010000-LTLCardinality-03
FORMULA_NAME CircadianClock-PT-010000-LTLCardinality-04
FORMULA_NAME CircadianClock-PT-010000-LTLCardinality-05
FORMULA_NAME CircadianClock-PT-010000-LTLCardinality-06
FORMULA_NAME CircadianClock-PT-010000-LTLCardinality-07
FORMULA_NAME CircadianClock-PT-010000-LTLCardinality-08
FORMULA_NAME CircadianClock-PT-010000-LTLCardinality-09
FORMULA_NAME CircadianClock-PT-010000-LTLCardinality-10
FORMULA_NAME CircadianClock-PT-010000-LTLCardinality-11
FORMULA_NAME CircadianClock-PT-010000-LTLCardinality-12
FORMULA_NAME CircadianClock-PT-010000-LTLCardinality-13
FORMULA_NAME CircadianClock-PT-010000-LTLCardinality-14
FORMULA_NAME CircadianClock-PT-010000-LTLCardinality-15

=== Now, execution of the tool begins

BK_START 1527625917239

Using solver Z3 to compute partial order matrices.
Built C files in :
/home/mcc/execution
Invoking ITS tools like this :CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.201805241334/bin/its-ltl-linux64, --gc-threshold, 2000000, -i, /home/mcc/execution/LTLCardinality.pnml.gal, -t, CGAL, -LTL, /home/mcc/execution/LTLCardinality.ltl, -c, -stutter-deadlock], workingDir=/home/mcc/execution]

its-ltl command run as :

/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.201805241334/bin/its-ltl-linux64 --gc-threshold 2000000 -i /home/mcc/execution/LTLCardinality.pnml.gal -t CGAL -LTL /home/mcc/execution/LTLCardinality.ltl -c -stutter-deadlock
Read 16 LTL properties
Checking formula 0 : !((F(F(X(F("(c_cap<=mr_cap)"))))))
Formula 0 simplified : !FXF"(c_cap<=mr_cap)"
Presburger conditions satisfied. Using coverability to approximate state space in K-Induction.
Normalized transition count is 14
// Phase 1: matrix 14 rows 14 cols
invariant :da + da_a = 1
invariant :mr + mr_cap = 10000
invariant :a + a_cap = 10000
invariant :dr + dr_a = 1
invariant :ma + ma_cap = 10000
invariant :c + c_cap = 10000
invariant :r + r_cap = 10000
Running compilation step : CommandLine [args=[gcc, -c, -I/home/mcc/BenchKit//lts_install_dir//include, -I., -std=c99, -fPIC, -O3, model.c], workingDir=/home/mcc/execution]
Compilation finished in 895 ms.
Running link step : CommandLine [args=[gcc, -shared, -o, gal.so, model.o], workingDir=/home/mcc/execution]
Link finished in 88 ms.
Running LTSmin : CommandLine [args=[/home/mcc/BenchKit//lts_install_dir//bin/pins2lts-mc, ./gal.so, --threads=1, --when, --ltl, <>(<>(X(<>((LTLAP0==true))))), --buchi-type=spotba], workingDir=/home/mcc/execution]
LTSmin run took 47 ms.
FORMULA CircadianClock-PT-010000-LTLCardinality-00 FALSE TECHNIQUES PARTIAL_ORDER EXPLICIT LTSMIN SAT_SMT
Running LTSmin : CommandLine [args=[/home/mcc/BenchKit//lts_install_dir//bin/pins2lts-mc, ./gal.so, --threads=1, -p, --pins-guards, --when, --ltl, (LTLAP1==true), --buchi-type=spotba], workingDir=/home/mcc/execution]
LTSmin run took 27 ms.
FORMULA CircadianClock-PT-010000-LTLCardinality-01 FALSE TECHNIQUES PARTIAL_ORDER EXPLICIT LTSMIN SAT_SMT
Running LTSmin : CommandLine [args=[/home/mcc/BenchKit//lts_install_dir//bin/pins2lts-mc, ./gal.so, --threads=1, -p, --pins-guards, --when, --ltl, [](<>((LTLAP2==true))), --buchi-type=spotba], workingDir=/home/mcc/execution]
WARNING : LTSmin timed out (>225 s) on command CommandLine [args=[/home/mcc/BenchKit//lts_install_dir//bin/pins2lts-mc, ./gal.so, --threads=1, -p, --pins-guards, --when, --ltl, [](<>((LTLAP2==true))), --buchi-type=spotba], workingDir=/home/mcc/execution]
Running LTSmin : CommandLine [args=[/home/mcc/BenchKit//lts_install_dir//bin/pins2lts-mc, ./gal.so, --threads=1, --when, --ltl, X([](((LTLAP3==true))U((LTLAP4==true)))), --buchi-type=spotba], workingDir=/home/mcc/execution]
LTSmin run took 85 ms.
FORMULA CircadianClock-PT-010000-LTLCardinality-03 FALSE TECHNIQUES PARTIAL_ORDER EXPLICIT LTSMIN SAT_SMT
Running LTSmin : CommandLine [args=[/home/mcc/BenchKit//lts_install_dir//bin/pins2lts-mc, ./gal.so, --threads=1, -p, --pins-guards, --when, --ltl, []([]((LTLAP5==true))), --buchi-type=spotba], workingDir=/home/mcc/execution]
LTSmin run took 10279 ms.
FORMULA CircadianClock-PT-010000-LTLCardinality-04 FALSE TECHNIQUES PARTIAL_ORDER EXPLICIT LTSMIN SAT_SMT
Running LTSmin : CommandLine [args=[/home/mcc/BenchKit//lts_install_dir//bin/pins2lts-mc, ./gal.so, --threads=1, -p, --pins-guards, --when, --ltl, []((LTLAP6==true)), --buchi-type=spotba], workingDir=/home/mcc/execution]
WARNING : LTS min runner thread failed on error :java.lang.RuntimeException: Unexpected exception when executing ltsmin :CommandLine [args=[/home/mcc/BenchKit//lts_install_dir//bin/pins2lts-mc, ./gal.so, --threads=1, -p, --pins-guards, --when, --ltl, []((LTLAP6==true)), --buchi-type=spotba], workingDir=/home/mcc/execution]
255

BK_TIME_CONFINEMENT_REACHED

--------------------
content from stderr:

+ export BINDIR=/home/mcc/BenchKit/
+ BINDIR=/home/mcc/BenchKit/
++ pwd
+ export MODEL=/home/mcc/execution
+ MODEL=/home/mcc/execution
+ /home/mcc/BenchKit//runeclipse.sh /home/mcc/execution LTLCardinality -its -ltsminpath /home/mcc/BenchKit//lts_install_dir/ -louvain -smt
+ ulimit -s 65536
+ [[ -z '' ]]
+ export LTSMIN_MEM_SIZE=8589934592
+ LTSMIN_MEM_SIZE=8589934592
+ /home/mcc/BenchKit//itstools/its-tools -consoleLog -data /home/mcc/execution/workspace -pnfolder /home/mcc/execution -examination LTLCardinality -z3path /home/mcc/BenchKit//z3/bin/z3 -yices2path /home/mcc/BenchKit//yices/bin/yices -its -ltsminpath /home/mcc/BenchKit//lts_install_dir/ -louvain -smt -vmargs -Dosgi.locking=none -Declipse.stateSaveDelayInterval=-1 -Dosgi.configuration.area=/tmp/.eclipse -Xss8m -Xms40m -Xmx8192m -Dfile.encoding=UTF-8 -Dosgi.requiredJavaVersion=1.6
May 29, 2018 8:32:00 PM fr.lip6.move.gal.application.Application start
INFO: Running its-tools with arguments : [-pnfolder, /home/mcc/execution, -examination, LTLCardinality, -z3path, /home/mcc/BenchKit//z3/bin/z3, -yices2path, /home/mcc/BenchKit//yices/bin/yices, -its, -ltsminpath, /home/mcc/BenchKit//lts_install_dir/, -louvain, -smt]
May 29, 2018 8:32:00 PM fr.lip6.move.gal.application.MccTranslator transformPNML
INFO: Parsing pnml file : /home/mcc/execution/model.pnml
May 29, 2018 8:32:00 PM fr.lip6.move.gal.nupn.PTNetReader loadFromXML
INFO: Load time of PNML (sax parser for PT used): 64 ms
May 29, 2018 8:32:00 PM fr.lip6.move.gal.pnml.togal.PTGALTransformer handlePage
INFO: Transformed 14 places.
May 29, 2018 8:32:00 PM fr.lip6.move.gal.pnml.togal.PTGALTransformer handlePage
INFO: Transformed 16 transitions.
May 29, 2018 8:32:00 PM fr.lip6.move.serialization.SerializationUtil systemToFile
INFO: Time to serialize gal into /home/mcc/execution/model.pnml.img.gal : 20 ms
May 29, 2018 8:32:00 PM fr.lip6.move.gal.instantiate.GALRewriter flatten
INFO: Flatten gal took : 57 ms
May 29, 2018 8:32:00 PM fr.lip6.move.serialization.SerializationUtil systemToFile
INFO: Time to serialize gal into /home/mcc/execution/LTLCardinality.pnml.gal : 3 ms
May 29, 2018 8:32:00 PM fr.lip6.move.serialization.SerializationUtil serializePropertiesForITSLTLTools
INFO: Time to serialize properties into /home/mcc/execution/LTLCardinality.ltl : 2 ms
May 29, 2018 8:32:01 PM fr.lip6.move.gal.semantics.DeterministicNextBuilder getDeterministicNext
INFO: Input system was already deterministic with 16 transitions.
May 29, 2018 8:32:01 PM fr.lip6.move.gal.gal2smt.bmc.KInductionSolver computeAndDeclareInvariants
INFO: Computed 7 place invariants in 11 ms
May 29, 2018 8:32:01 PM fr.lip6.move.gal.gal2smt.bmc.KInductionSolver init
INFO: Proved 14 variables to be positive in 173 ms
May 29, 2018 8:32:01 PM fr.lip6.move.gal.gal2smt.bmc.NecessaryEnablingsolver computeAblingMatrix
INFO: Computing symmetric may disable matrix : 16 transitions.
May 29, 2018 8:32:01 PM fr.lip6.move.gal.gal2smt.bmc.NecessaryEnablingsolver printStats
INFO: Computation of disable matrix completed :0/16 took 0 ms. Total solver calls (SAT/UNSAT): 0(0/0)
May 29, 2018 8:32:01 PM fr.lip6.move.gal.gal2smt.bmc.NecessaryEnablingsolver printStats
INFO: Computation of Complete disable matrix. took 2 ms. Total solver calls (SAT/UNSAT): 0(0/0)
May 29, 2018 8:32:01 PM fr.lip6.move.gal.gal2smt.bmc.NecessaryEnablingsolver computeAblingMatrix
INFO: Computing symmetric may enable matrix : 16 transitions.
May 29, 2018 8:32:01 PM fr.lip6.move.gal.gal2smt.bmc.NecessaryEnablingsolver printStats
INFO: Computation of Complete enable matrix. took 1 ms. Total solver calls (SAT/UNSAT): 0(0/0)
May 29, 2018 8:32:02 PM fr.lip6.move.gal.gal2smt.bmc.NecessaryEnablingsolver computeCoEnablingMatrix
INFO: Computing symmetric co enabling matrix : 16 transitions.
May 29, 2018 8:32:02 PM fr.lip6.move.gal.gal2smt.bmc.NecessaryEnablingsolver printStats
INFO: Computation of Finished co-enabling matrix. took 321 ms. Total solver calls (SAT/UNSAT): 47(39/8)
May 29, 2018 8:32:02 PM fr.lip6.move.gal.gal2smt.bmc.NecessaryEnablingsolver computeDoNotAccord
INFO: Computing Do-Not-Accords matrix : 16 transitions.
May 29, 2018 8:32:03 PM fr.lip6.move.gal.gal2smt.bmc.NecessaryEnablingsolver printStats
INFO: Computation of Completed DNA matrix. took 110 ms. Total solver calls (SAT/UNSAT): 22(0/22)
May 29, 2018 8:32:03 PM fr.lip6.move.gal.gal2pins.Gal2PinsTransformerNext transform
INFO: Built C files in 2062ms conformant to PINS in folder :/home/mcc/execution
pins2lts-mc, 0.000: Registering PINS so language module
pins2lts-mc, 0.000: Loading model from ./gal.so
pins2lts-mc, 0.000: library has no initializer
pins2lts-mc, 0.000: loading model GAL
pins2lts-mc, 0.000: completed loading model GAL
pins2lts-mc, 0.000: Initializing POR dependencies: labels 37, guards 16
pins2lts-mc, 0.000: LTL layer: formula: []((LTLAP6==true))
pins2lts-mc, 0.001: "[]((LTLAP6==true))" is not a file, parsing as formula...
pins2lts-mc, 0.001: Using Spin LTL semantics
pins2lts-mc, 0.013: buchi has 2 states
pins2lts-mc, 0.013: Weak Buchi automaton detected, adding non-accepting as progress label.
pins2lts-mc, 0.013: Forcing use of the an ignoring proviso (cndfs)
pins2lts-mc, 0.014: There are 39 state labels and 1 edge labels
pins2lts-mc, 0.014: State length is 15, there are 19 groups
pins2lts-mc, 0.014: Running cndfs using 1 core (sequential)
pins2lts-mc, 0.014: Using a tree table with 2^27 elements
pins2lts-mc, 0.014: Successor permutation: dynamic
pins2lts-mc, 0.014: Visible groups: 0 / 19, labels: 1 / 39
pins2lts-mc, 0.014: POR cycle proviso: cndfs (ltl)
pins2lts-mc, 0.014: Global bits: 2, count bits: 2, local bits: 0
pins2lts-mc, 0.057: [Blue] 961 levels 1000 states 6051 transitions
pins2lts-mc, 0.094: [Blue] 1903 levels 2000 states 11818 transitions
pins2lts-mc, 0.169: [Blue] 3802 levels 4000 states 24480 transitions
pins2lts-mc, 0.315: [Blue] 7607 levels 8000 states 48745 transitions
pins2lts-mc, 0.575: [Blue] 15290 levels 16000 states 95877 transitions
pins2lts-mc, 1.047: [Blue] 30823 levels 32000 states 186783 transitions
pins2lts-mc, 1.885: [Blue] 62115 levels 64000 states 372744 transitions
pins2lts-mc, 4.404: [Blue] 126099 levels 128000 states 980623 transitions
pins2lts-mc, 7.716: [Blue] 254099 levels 256000 states 1999723 transitions
pins2lts-mc, 14.091: [Blue] 510099 levels 512000 states 4063697 transitions
pins2lts-mc, 27.143: [Blue] 1022099 levels 1024000 states 8151647 transitions
pins2lts-mc, 52.491: [Blue] 2046099 levels 2048000 states 16340431 transitions
pins2lts-mc, 103.430: [Blue] 4094099 levels 4096000 states 32719339 transitions
pins2lts-mc, 190.112: Error: tree leafs table full! Change -s/--ratio.
pins2lts-mc, 190.169:
pins2lts-mc, 190.169: Explored 6650964 states 53160719 transitions, fanout: 7.993
pins2lts-mc, 190.169: Total exploration time 190.150 sec (190.150 sec minimum, 190.150 sec on average)
pins2lts-mc, 190.169: States per second: 34977, Transitions per second: 279573
pins2lts-mc, 190.169:
pins2lts-mc, 190.169: State space has 33160531 states, 0 are accepting
pins2lts-mc, 190.169: cndfs_1 (permutation: dynamic) stats:
pins2lts-mc, 190.169: blue states: 6650964 (20.06%), transitions: 0 (per worker)
pins2lts-mc, 190.169: red states: 0 (0.00%), bogus: 0 (0.00%), transitions: 0, waits: 0 (0.00 sec)
pins2lts-mc, 190.169: all-red states: 0 (0.00%), bogus 0 (0.00%)
pins2lts-mc, 190.169:
pins2lts-mc, 190.169: Total memory used for local state coloring: 101.5MB
pins2lts-mc, 190.169:
pins2lts-mc, 190.169: Queue width: 8B, total height: 6649063, memory: 50.73MB
pins2lts-mc, 190.169: Tree memory: 509.0MB, 16.1 B/state, compr.: 26.0%
pins2lts-mc, 190.169: Tree fill ratio (roots/leafs): 24.0%/99.0%
pins2lts-mc, 190.169: Stored 16 string chucks using 0MB
pins2lts-mc, 190.169: Total memory used for chunk indexing: 0MB
pins2lts-mc, 190.169: Est. total memory use: 559.7MB (~1074.7MB paged-in)
java.lang.RuntimeException: Unexpected exception when executing ltsmin :CommandLine [args=[/home/mcc/BenchKit//lts_install_dir//bin/pins2lts-mc, ./gal.so, --threads=1, -p, --pins-guards, --when, --ltl, []((LTLAP6==true)), --buchi-type=spotba], workingDir=/home/mcc/execution]
255
at fr.lip6.move.gal.application.LTSminRunner.checkProperty(LTSminRunner.java:167)
at fr.lip6.move.gal.application.LTSminRunner.access$9(LTSminRunner.java:122)
at fr.lip6.move.gal.application.LTSminRunner$1.run(LTSminRunner.java:91)
at java.lang.Thread.run(Thread.java:748)

Sequence of Actions to be Executed by the VM

This is useful if one wants to reexecute the tool in the VM from the submitted image disk.

set -x
# this is for BenchKit: configuration of major elements for the test
export BK_INPUT="CircadianClock-PT-010000"
export BK_EXAMINATION="LTLCardinality"
export BK_TOOL="itstoolsl"
export BK_RESULT_DIR="/tmp/BK_RESULTS/OUTPUTS"
export BK_TIME_CONFINEMENT="3600"
export BK_MEMORY_CONFINEMENT="16384"

# this is specific to your benchmark or test

export BIN_DIR="$HOME/BenchKit/bin"

# remove the execution directoty if it exists (to avoid increse of .vmdk images)
if [ -d execution ] ; then
rm -rf execution
fi

tar xzf /home/mcc/BenchKit/INPUTS/CircadianClock-PT-010000.tgz
mv CircadianClock-PT-010000 execution
cd execution
pwd
ls -lh

# this is for BenchKit: explicit launching of the test
echo "====================================================================="
echo " Generated by BenchKit 2-3637"
echo " Executing tool itstoolsl"
echo " Input is CircadianClock-PT-010000, examination is LTLCardinality"
echo " Time confinement is $BK_TIME_CONFINEMENT seconds"
echo " Memory confinement is 16384 MBytes"
echo " Number of cores is 4"
echo " Run identifier is r225-ebro-152732379700145"
echo "====================================================================="
echo
echo "--------------------"
echo "content from stdout:"
echo
echo "=== Data for post analysis generated by BenchKit (invocation template)"
echo
if [ "LTLCardinality" = "UpperBounds" ] ; then
echo "The expected result is a vector of positive values"
echo NUM_VECTOR
elif [ "LTLCardinality" != "StateSpace" ] ; then
echo "The expected result is a vector of booleans"
echo BOOL_VECTOR
else
echo "no data necessary for post analysis"
fi
echo
if [ -f "LTLCardinality.txt" ] ; then
echo "here is the order used to build the result vector(from text file)"
for x in $(grep Property LTLCardinality.txt | cut -d ' ' -f 2 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ -f "LTLCardinality.xml" ] ; then # for cunf (txt files deleted;-)
echo echo "here is the order used to build the result vector(from xml file)"
for x in $(grep '' LTLCardinality.xml | cut -d '>' -f 2 | cut -d '<' -f 1 | sort -u) ; do
echo "FORMULA_NAME $x"
done
fi
echo
echo "=== Now, execution of the tool begins"
echo
echo -n "BK_START "
date -u +%s%3N
echo
timeout -s 9 $BK_TIME_CONFINEMENT bash -c "/home/mcc/BenchKit/BenchKit_head.sh 2> STDERR ; echo ; echo -n \"BK_STOP \" ; date -u +%s%3N"
if [ $? -eq 137 ] ; then
echo
echo "BK_TIME_CONFINEMENT_REACHED"
fi
echo
echo "--------------------"
echo "content from stderr:"
echo
cat STDERR ;