Execution Chart

We display below the execution chart for this examination (boot time has been removed).

Trace from the execution

Waiting for the VM to be ready (probing ssh)
....................................
/home/mcc/execution
total 2.5M
-rw-r--r-- 1 mcc users 34K May 15 18:54 CTLCardinality.txt
-rw-r--r-- 1 mcc users 128K May 15 18:54 CTLCardinality.xml
-rw-r--r-- 1 mcc users 13K May 15 18:54 CTLFireability.txt
-rw-r--r-- 1 mcc users 59K May 15 18:54 CTLFireability.xml
-rw-r--r-- 1 mcc users 4.0K May 15 18:50 GenericPropertiesDefinition.xml
-rw-r--r-- 1 mcc users 6.4K May 15 18:50 GenericPropertiesVerdict.xml
-rw-r--r-- 1 mcc users 30K May 26 09:27 LTLCardinality.txt
-rw-r--r-- 1 mcc users 107K May 26 09:27 LTLCardinality.xml
-rw-r--r-- 1 mcc users 6.3K May 26 09:27 LTLFireability.txt
-rw-r--r-- 1 mcc users 27K May 26 09:27 LTLFireability.xml
-rw-r--r-- 1 mcc users 43K May 15 18:54 ReachabilityCardinality.txt
-rw-r--r-- 1 mcc users 166K May 15 18:54 ReachabilityCardinality.xml
-rw-r--r-- 1 mcc users 116 May 15 18:54 ReachabilityDeadlock.txt
-rw-r--r-- 1 mcc users 354 May 15 18:54 ReachabilityDeadlock.xml
-rw-r--r-- 1 mcc users 8.3K May 15 18:54 ReachabilityFireability.txt
-rw-r--r-- 1 mcc users 38K May 15 18:54 ReachabilityFireability.xml
-rw-r--r-- 1 mcc users 3.8K May 15 18:54 UpperBounds.txt
-rw-r--r-- 1 mcc users 11K May 15 18:54 UpperBounds.xml
-rw-r--r-- 1 mcc users 5 May 15 18:50 equiv_col
-rw-r--r-- 1 mcc users 3 May 15 18:50 instance
-rw-r--r-- 1 mcc users 6 May 15 18:50 iscolored
-rw-r--r-- 1 mcc users 1.8M May 15 18:50 model.pnml
=====================================================================
Generated by BenchKit 2-3637
Executing tool itstoolsl
Input is QuasiCertifProtocol-PT-32, examination is CTLFireability
Time confinement is 3600 seconds
Memory confinement is 16384 MBytes
Number of cores is 4
Run identifier is r141-qhx2-152673582700102
=====================================================================

--------------------
content from stdout:

=== Data for post analysis generated by BenchKit (invocation template)

The expected result is a vector of booleans
BOOL_VECTOR

here is the order used to build the result vector(from text file)
FORMULA_NAME QuasiCertifProtocol-PT-32-CTLFireability-00
FORMULA_NAME QuasiCertifProtocol-PT-32-CTLFireability-01
FORMULA_NAME QuasiCertifProtocol-PT-32-CTLFireability-02
FORMULA_NAME QuasiCertifProtocol-PT-32-CTLFireability-03
FORMULA_NAME QuasiCertifProtocol-PT-32-CTLFireability-04
FORMULA_NAME QuasiCertifProtocol-PT-32-CTLFireability-05
FORMULA_NAME QuasiCertifProtocol-PT-32-CTLFireability-06
FORMULA_NAME QuasiCertifProtocol-PT-32-CTLFireability-07
FORMULA_NAME QuasiCertifProtocol-PT-32-CTLFireability-08
FORMULA_NAME QuasiCertifProtocol-PT-32-CTLFireability-09
FORMULA_NAME QuasiCertifProtocol-PT-32-CTLFireability-10
FORMULA_NAME QuasiCertifProtocol-PT-32-CTLFireability-11
FORMULA_NAME QuasiCertifProtocol-PT-32-CTLFireability-12
FORMULA_NAME QuasiCertifProtocol-PT-32-CTLFireability-13
FORMULA_NAME QuasiCertifProtocol-PT-32-CTLFireability-14
FORMULA_NAME QuasiCertifProtocol-PT-32-CTLFireability-15

=== Now, execution of the tool begins

BK_START 1527908707888

Converted graph to binary with : CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.louvain.binaries_1.0.0.201805241334/bin/convert-linux64, -i, /tmp/graph6665629256826766798.txt, -o, /tmp/graph6665629256826766798.bin, -w, /tmp/graph6665629256826766798.weights], workingDir=null]
Built communities with : CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.louvain.binaries_1.0.0.201805241334/bin/louvain-linux64, /tmp/graph6665629256826766798.bin, -l, -1, -v, -w, /tmp/graph6665629256826766798.weights, -q, 0, -e, 0.001], workingDir=null]
Invoking ITS tools like this :CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.201805241334/bin/its-ctl-linux64, --gc-threshold, 2000000, --quiet, -i, /home/mcc/execution/CTLFireability.pnml.gal, -t, CGAL, -ctl, /home/mcc/execution/CTLFireability.ctl], workingDir=/home/mcc/execution]

its-ctl command run as :

/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.201805241334/bin/its-ctl-linux64 --gc-threshold 2000000 --quiet -i /home/mcc/execution/CTLFireability.pnml.gal -t CGAL -ctl /home/mcc/execution/CTLFireability.ctl
No direction supplied, using forward translation only.
Parsed 16 CTL formulae.
built 70 ordering constraints for composite.
built 165 ordering constraints for composite.
built 46 ordering constraints for composite.
built 46 ordering constraints for composite.
built 46 ordering constraints for composite.
built 46 ordering constraints for composite.
built 46 ordering constraints for composite.
built 46 ordering constraints for composite.
built 46 ordering constraints for composite.
built 46 ordering constraints for composite.
built 46 ordering constraints for composite.
built 46 ordering constraints for composite.
built 46 ordering constraints for composite.
built 46 ordering constraints for composite.
built 46 ordering constraints for composite.
built 47 ordering constraints for composite.
built 46 ordering constraints for composite.
built 46 ordering constraints for composite.
built 46 ordering constraints for composite.
built 46 ordering constraints for composite.
built 46 ordering constraints for composite.
built 46 ordering constraints for composite.
built 46 ordering constraints for composite.
built 46 ordering constraints for composite.
built 46 ordering constraints for composite.
built 47 ordering constraints for composite.
built 45 ordering constraints for composite.
built 46 ordering constraints for composite.
built 46 ordering constraints for composite.
built 46 ordering constraints for composite.
built 46 ordering constraints for composite.
built 45 ordering constraints for composite.
built 45 ordering constraints for composite.
built 46 ordering constraints for composite.
built 46 ordering constraints for composite.
sparsehash FATAL ERROR: failed to allocate 33 groups

BK_STOP 1527910410208

--------------------
content from stderr:

+ export BINDIR=/home/mcc/BenchKit/
+ BINDIR=/home/mcc/BenchKit/
++ pwd
+ export MODEL=/home/mcc/execution
+ MODEL=/home/mcc/execution
+ /home/mcc/BenchKit//runeclipse.sh /home/mcc/execution CTLFireability -its -ltsminpath /home/mcc/BenchKit//lts_install_dir/ -louvain -smt
+ ulimit -s 65536
+ [[ -z '' ]]
+ export LTSMIN_MEM_SIZE=8589934592
+ LTSMIN_MEM_SIZE=8589934592
+ /home/mcc/BenchKit//itstools/its-tools -consoleLog -data /home/mcc/execution/workspace -pnfolder /home/mcc/execution -examination CTLFireability -z3path /home/mcc/BenchKit//z3/bin/z3 -yices2path /home/mcc/BenchKit//yices/bin/yices -its -ltsminpath /home/mcc/BenchKit//lts_install_dir/ -louvain -smt -vmargs -Dosgi.locking=none -Declipse.stateSaveDelayInterval=-1 -Dosgi.configuration.area=/tmp/.eclipse -Xss8m -Xms40m -Xmx8192m -Dfile.encoding=UTF-8 -Dosgi.requiredJavaVersion=1.6
Jun 02, 2018 3:05:21 AM fr.lip6.move.gal.application.Application start
INFO: Running its-tools with arguments : [-pnfolder, /home/mcc/execution, -examination, CTLFireability, -z3path, /home/mcc/BenchKit//z3/bin/z3, -yices2path, /home/mcc/BenchKit//yices/bin/yices, -its, -ltsminpath, /home/mcc/BenchKit//lts_install_dir/, -louvain, -smt]
Jun 02, 2018 3:05:21 AM fr.lip6.move.gal.application.MccTranslator transformPNML
INFO: Parsing pnml file : /home/mcc/execution/model.pnml
Jun 02, 2018 3:05:21 AM fr.lip6.move.gal.nupn.PTNetReader loadFromXML
INFO: Load time of PNML (sax parser for PT used): 511 ms
Jun 02, 2018 3:05:21 AM fr.lip6.move.gal.pnml.togal.PTGALTransformer handlePage
INFO: Transformed 3806 places.
Jun 02, 2018 3:05:22 AM fr.lip6.move.gal.pnml.togal.PTGALTransformer handlePage
INFO: Transformed 506 transitions.
Jun 02, 2018 3:05:22 AM fr.lip6.move.gal.application.MccTranslator applyOrder
INFO: Applying decomposition
Jun 02, 2018 3:05:23 AM fr.lip6.move.gal.instantiate.GALRewriter flatten
INFO: Flatten gal took : 782 ms
Jun 02, 2018 3:05:24 AM fr.lip6.move.gal.instantiate.GALRewriter flatten
INFO: Flatten gal took : 544 ms
Begin: Sat Jun 2 03:05:25 2018

Computation of communities with the Newman-Girvan Modularity quality function

level 0:
start computation: Sat Jun 2 03:05:25 2018
network size: 3806 nodes, 86948 links, 1012 weight
quality increased from -0.0530412 to 0.465823
end computation: Sat Jun 2 03:05:25 2018
level 1:
start computation: Sat Jun 2 03:05:25 2018
network size: 197 nodes, 6515 links, 1012 weight
quality increased from 0.465823 to 0.522356
end computation: Sat Jun 2 03:05:25 2018
level 2:
start computation: Sat Jun 2 03:05:25 2018
network size: 90 nodes, 3720 links, 1012 weight
quality increased from 0.522356 to 0.549674
end computation: Sat Jun 2 03:05:25 2018
level 3:
start computation: Sat Jun 2 03:05:25 2018
network size: 35 nodes, 295 links, 1012 weight
quality increased from 0.549674 to 0.549674
end computation: Sat Jun 2 03:05:25 2018
End: Sat Jun 2 03:05:25 2018
Total duration: 0 sec
0.549674
Jun 02, 2018 3:05:25 AM fr.lip6.move.gal.instantiate.CompositeBuilder decomposeWithOrder
INFO: Decomposing Gal with order
Jun 02, 2018 3:05:26 AM fr.lip6.move.gal.instantiate.GALRewriter flatten
INFO: Flatten gal took : 356 ms
Jun 02, 2018 3:05:26 AM fr.lip6.move.gal.instantiate.CompositeBuilder rewriteArraysToAllowPartition
INFO: Rewriting arrays to variables to allow decomposition.
Jun 02, 2018 3:05:28 AM fr.lip6.move.gal.instantiate.Instantiator fuseIsomorphicEffects
INFO: Removed a total of 205 redundant transitions.
Jun 02, 2018 3:05:28 AM fr.lip6.move.serialization.SerializationUtil systemToFile
INFO: Time to serialize gal into /home/mcc/execution/CTLFireability.pnml.gal : 120 ms
Jun 02, 2018 3:05:28 AM fr.lip6.move.serialization.SerializationUtil serializePropertiesForITSCTLTools
INFO: Time to serialize properties into /home/mcc/execution/CTLFireability.ctl : 44 ms
ITS-tools command line returned an error code 1

Sequence of Actions to be Executed by the VM

This is useful if one wants to reexecute the tool in the VM from the submitted image disk.

set -x
# this is for BenchKit: configuration of major elements for the test
export BK_INPUT="QuasiCertifProtocol-PT-32"
export BK_EXAMINATION="CTLFireability"
export BK_TOOL="itstoolsl"
export BK_RESULT_DIR="/tmp/BK_RESULTS/OUTPUTS"
export BK_TIME_CONFINEMENT="3600"
export BK_MEMORY_CONFINEMENT="16384"

# this is specific to your benchmark or test

export BIN_DIR="$HOME/BenchKit/bin"

# remove the execution directoty if it exists (to avoid increse of .vmdk images)
if [ -d execution ] ; then
rm -rf execution
fi

tar xzf /home/mcc/BenchKit/INPUTS/QuasiCertifProtocol-PT-32.tgz
mv QuasiCertifProtocol-PT-32 execution
cd execution
pwd
ls -lh

# this is for BenchKit: explicit launching of the test
echo "====================================================================="
echo " Generated by BenchKit 2-3637"
echo " Executing tool itstoolsl"
echo " Input is QuasiCertifProtocol-PT-32, examination is CTLFireability"
echo " Time confinement is $BK_TIME_CONFINEMENT seconds"
echo " Memory confinement is 16384 MBytes"
echo " Number of cores is 4"
echo " Run identifier is r141-qhx2-152673582700102"
echo "====================================================================="
echo
echo "--------------------"
echo "content from stdout:"
echo
echo "=== Data for post analysis generated by BenchKit (invocation template)"
echo
if [ "CTLFireability" = "UpperBounds" ] ; then
echo "The expected result is a vector of positive values"
echo NUM_VECTOR
elif [ "CTLFireability" != "StateSpace" ] ; then
echo "The expected result is a vector of booleans"
echo BOOL_VECTOR
else
echo "no data necessary for post analysis"
fi
echo
if [ -f "CTLFireability.txt" ] ; then
echo "here is the order used to build the result vector(from text file)"
for x in $(grep Property CTLFireability.txt | cut -d ' ' -f 2 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ -f "CTLFireability.xml" ] ; then # for cunf (txt files deleted;-)
echo echo "here is the order used to build the result vector(from xml file)"
for x in $(grep '' CTLFireability.xml | cut -d '>' -f 2 | cut -d '<' -f 1 | sort -u) ; do
echo "FORMULA_NAME $x"
done
fi
echo
echo "=== Now, execution of the tool begins"
echo
echo -n "BK_START "
date -u +%s%3N
echo
timeout -s 9 $BK_TIME_CONFINEMENT bash -c "/home/mcc/BenchKit/BenchKit_head.sh 2> STDERR ; echo ; echo -n \"BK_STOP \" ; date -u +%s%3N"
if [ $? -eq 137 ] ; then
echo
echo "BK_TIME_CONFINEMENT_REACHED"
fi
echo
echo "--------------------"
echo "content from stderr:"
echo
cat STDERR ;