Execution Chart

We display below the execution chart for this examination (boot time has been removed).

Trace from the execution

Waiting for the VM to be ready (probing ssh)
......................................................................................................................................................
/home/mcc/execution
total 268K
-rw-r--r-- 1 mcc users 3.5K May 15 18:54 CTLCardinality.txt
-rw-r--r-- 1 mcc users 18K May 15 18:54 CTLCardinality.xml
-rw-r--r-- 1 mcc users 2.8K May 15 18:54 CTLFireability.txt
-rw-r--r-- 1 mcc users 17K May 15 18:54 CTLFireability.xml
-rw-r--r-- 1 mcc users 4.0K May 15 18:50 GenericPropertiesDefinition.xml
-rw-r--r-- 1 mcc users 6.4K May 15 18:50 GenericPropertiesVerdict.xml
-rw-r--r-- 1 mcc users 2.5K May 26 09:27 LTLCardinality.txt
-rw-r--r-- 1 mcc users 11K May 26 09:27 LTLCardinality.xml
-rw-r--r-- 1 mcc users 2.1K May 26 09:27 LTLFireability.txt
-rw-r--r-- 1 mcc users 9.5K May 26 09:27 LTLFireability.xml
-rw-r--r-- 1 mcc users 3.5K May 15 18:54 ReachabilityCardinality.txt
-rw-r--r-- 1 mcc users 17K May 15 18:54 ReachabilityCardinality.xml
-rw-r--r-- 1 mcc users 117 May 15 18:54 ReachabilityDeadlock.txt
-rw-r--r-- 1 mcc users 355 May 15 18:54 ReachabilityDeadlock.xml
-rw-r--r-- 1 mcc users 2.8K May 15 18:54 ReachabilityFireability.txt
-rw-r--r-- 1 mcc users 15K May 15 18:54 ReachabilityFireability.xml
-rw-r--r-- 1 mcc users 1.8K May 15 18:54 UpperBounds.txt
-rw-r--r-- 1 mcc users 3.8K May 15 18:54 UpperBounds.xml
-rw-r--r-- 1 mcc users 5 May 15 18:50 equiv_pt
-rw-r--r-- 1 mcc users 3 May 15 18:50 instance
-rw-r--r-- 1 mcc users 5 May 15 18:50 iscolored
-rw-r--r-- 1 mcc users 104K May 15 18:50 model.pnml
=====================================================================
Generated by BenchKit 2-3637
Executing tool itstools
Input is QuasiCertifProtocol-COL-22, examination is ReachabilityDeadlock
Time confinement is 3600 seconds
Memory confinement is 16384 MBytes
Number of cores is 4
Run identifier is r140-qhx2-152673581800041
=====================================================================

--------------------
content from stdout:

=== Data for post analysis generated by BenchKit (invocation template)

The expected result is a vector of booleans
BOOL_VECTOR

here is the order used to build the result vector(from text file)
FORMULA_NAME QuasiCertifProtocol-COL-22-ReachabilityDeadlock-0

=== Now, execution of the tool begins

BK_START 1527814821215

01:00:45.663 [main] ERROR PNML validation - The rng grammar file can't be accessed : www.pnml.org
01:00:45.668 [main] ERROR import - Grammar file errors have been raised, the validation can't be done, process will continue without Grammar validation
Flatten gal took : 3081 ms
Constant places removed 51 places and 1 transitions.
Iterating post reduction 0 with 51 rules applied. Total rules applied 51 place count 1915 transition count 355
Performed 2 Post agglomeration using F-continuation condition.
Constant places removed 2 places and 0 transitions.
Iterating post reduction 1 with 2 rules applied. Total rules applied 53 place count 1913 transition count 353
Applied a total of 53 rules in 750 ms. Remains 1913 /1966 variables (removed 53) and now considering 353/356 (removed 3) transitions.
// Phase 1: matrix 353 rows 1913 cols
Using solver Z3 to compute partial order matrices.
Built C files in :
/home/mcc/execution
Invoking ITS tools like this :CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.201805151631/bin/its-ctl-linux64, --gc-threshold, 2000000, --quiet, -i, /home/mcc/execution/ReachabilityDeadlock.pnml.gal, -t, CGAL, -ctl, DEADLOCK], workingDir=/home/mcc/execution]

its-ctl command run as :

/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.201805151631/bin/its-ctl-linux64 --gc-threshold 2000000 --quiet -i /home/mcc/execution/ReachabilityDeadlock.pnml.gal -t CGAL -ctl DEADLOCK
No direction supplied, using forward translation only.
Presburger conditions satisfied. Using coverability to approximate state space in K-Induction.
// Phase 1: matrix 353 rows 1913 cols
Running compilation step : CommandLine [args=[gcc, -c, -I/home/mcc/BenchKit//lts_install_dir//include, -I., -std=c99, -fPIC, -O3, model.c], workingDir=/home/mcc/execution]
sparsehash FATAL ERROR: failed to allocate 43 groups
WARNING : LTS min runner thread failed on error :java.lang.RuntimeException: Could not compile executable .CommandLine [args=[gcc, -c, -I/home/mcc/BenchKit//lts_install_dir//include, -I., -std=c99, -fPIC, -O3, model.c], workingDir=/home/mcc/execution]

BK_STOP 1527816527652

--------------------
content from stderr:

+ export BINDIR=/home/mcc/BenchKit/
+ BINDIR=/home/mcc/BenchKit/
++ pwd
+ export MODEL=/home/mcc/execution
+ MODEL=/home/mcc/execution
+ /home/mcc/BenchKit//runeclipse.sh /home/mcc/execution ReachabilityDeadlock -its -ltsminpath /home/mcc/BenchKit//lts_install_dir/ -smt
+ ulimit -s 65536
+ [[ -z '' ]]
+ export LTSMIN_MEM_SIZE=8589934592
+ LTSMIN_MEM_SIZE=8589934592
+ /home/mcc/BenchKit//itstools/its-tools -consoleLog -data /home/mcc/execution/workspace -pnfolder /home/mcc/execution -examination ReachabilityDeadlock -z3path /home/mcc/BenchKit//z3/bin/z3 -yices2path /home/mcc/BenchKit//yices/bin/yices -its -ltsminpath /home/mcc/BenchKit//lts_install_dir/ -smt -vmargs -Dosgi.locking=none -Declipse.stateSaveDelayInterval=-1 -Dosgi.configuration.area=/tmp/.eclipse -Xss8m -Xms40m -Xmx8192m -Dfile.encoding=UTF-8 -Dosgi.requiredJavaVersion=1.6
Jun 01, 2018 1:00:24 AM fr.lip6.move.gal.application.Application start
INFO: Running its-tools with arguments : [-pnfolder, /home/mcc/execution, -examination, ReachabilityDeadlock, -z3path, /home/mcc/BenchKit//z3/bin/z3, -yices2path, /home/mcc/BenchKit//yices/bin/yices, -its, -ltsminpath, /home/mcc/BenchKit//lts_install_dir/, -smt]
Jun 01, 2018 1:00:24 AM fr.lip6.move.gal.application.MccTranslator transformPNML
INFO: Parsing pnml file : /home/mcc/execution/model.pnml
Jun 01, 2018 1:00:24 AM fr.lip6.move.gal.pnml.togal.PnmlToGalTransformer transform
INFO: Detected file is not PT type :http://www.pnml.org/version-2009/grammar/symmetricnet
Jun 01, 2018 1:00:46 AM fr.lip6.move.gal.pnml.togal.PnmlToGalTransformer transform
INFO: Load time of PNML (colored model parsed with PNMLFW) : 21732 ms
Jun 01, 2018 1:00:46 AM fr.lip6.move.gal.pnml.togal.HLGALTransformer handlePage
INFO: Transformed 30 places.
Jun 01, 2018 1:00:46 AM fr.lip6.move.gal.pnml.togal.HLGALTransformer handlePage
INFO: Computed order using colors.
Jun 01, 2018 1:00:46 AM fr.lip6.move.gal.pnml.togal.HLGALTransformer handlePage
INFO: sort/places :tsidxtsid->n9,n8,n7,
Dot->malicious_reservoir,CstopAbort,SstopAbort,AstopAbort,a5,a4,a3,a2,a1,Astart,AstopOK,
tsid->n6,n5,n4,n3,n2,n1,c1,Cstart,Sstart,s2,s3,s4,s5,s6,SstopOK,CstopOK,

Jun 01, 2018 1:00:46 AM fr.lip6.move.gal.pnml.togal.HLGALTransformer handlePage
INFO: Transformed 26 transitions.
Jun 01, 2018 1:00:46 AM fr.lip6.move.gal.pnml.togal.PnmlToGalTransformer transform
INFO: Computed order based on color domains.
Jun 01, 2018 1:00:46 AM fr.lip6.move.serialization.SerializationUtil systemToFile
INFO: Time to serialize gal into /home/mcc/execution/model.pnml.img.gal : 95 ms
Jun 01, 2018 1:00:49 AM fr.lip6.move.gal.instantiate.GALRewriter flatten
INFO: Flatten gal took : 2340 ms
Jun 01, 2018 1:00:50 AM fr.lip6.move.serialization.SerializationUtil systemToFile
INFO: Time to serialize gal into /home/mcc/execution/model.pnml.simple.gal : 110 ms
Jun 01, 2018 1:00:50 AM fr.lip6.move.gal.semantics.DeterministicNextBuilder getDeterministicNext
INFO: Input system was not deterministic with 202 transitions. Expanding to a total of 363 deterministic transitions.
Jun 01, 2018 1:00:50 AM fr.lip6.move.gal.semantics.DeterministicNextBuilder getDeterministicNext
INFO: Determinization took 17 ms.
Jun 01, 2018 1:00:52 AM fr.lip6.move.serialization.SerializationUtil systemToFile
INFO: Time to serialize gal into /home/mcc/execution/ReachabilityDeadlock.pnml.gal : 42 ms
Jun 01, 2018 1:00:53 AM fr.lip6.move.gal.semantics.DeterministicNextBuilder getDeterministicNext
INFO: Input system was already deterministic with 353 transitions.
Jun 01, 2018 1:00:53 AM fr.lip6.move.gal.gal2smt.bmc.KInductionSolver computeAndDeclareInvariants
INFO: Computed 0 place invariants in 103 ms
Jun 01, 2018 1:01:02 AM fr.lip6.move.gal.gal2smt.bmc.KInductionSolver init
INFO: Proved 1913 variables to be positive in 8747 ms
Jun 01, 2018 1:01:02 AM fr.lip6.move.gal.gal2smt.bmc.NecessaryEnablingsolver computeAblingMatrix
INFO: Computing symmetric may disable matrix : 353 transitions.
Jun 01, 2018 1:01:02 AM fr.lip6.move.gal.gal2smt.bmc.NecessaryEnablingsolver printStats
INFO: Computation of disable matrix completed :0/353 took 1 ms. Total solver calls (SAT/UNSAT): 0(0/0)
Jun 01, 2018 1:01:02 AM fr.lip6.move.gal.gal2smt.bmc.NecessaryEnablingsolver printStats
INFO: Computation of Complete disable matrix. took 110 ms. Total solver calls (SAT/UNSAT): 0(0/0)
Jun 01, 2018 1:01:02 AM fr.lip6.move.gal.gal2smt.bmc.NecessaryEnablingsolver computeAblingMatrix
INFO: Computing symmetric may enable matrix : 353 transitions.
Jun 01, 2018 1:01:02 AM fr.lip6.move.gal.gal2smt.bmc.NecessaryEnablingsolver printStats
INFO: Computation of Complete enable matrix. took 138 ms. Total solver calls (SAT/UNSAT): 0(0/0)
Jun 01, 2018 1:01:02 AM fr.lip6.move.gal.gal2smt.bmc.NecessaryEnablingsolver computeCoEnablingMatrix
INFO: Computing symmetric co enabling matrix : 353 transitions.
Jun 01, 2018 1:01:05 AM fr.lip6.move.gal.gal2smt.bmc.NecessaryEnablingsolver printStats
INFO: Computation of co-enabling matrix(9/353) took 3034 ms. Total solver calls (SAT/UNSAT): 1565(1565/0)
Jun 01, 2018 1:01:09 AM fr.lip6.move.gal.gal2smt.bmc.NecessaryEnablingsolver printStats
INFO: Computation of co-enabling matrix(23/353) took 6317 ms. Total solver calls (SAT/UNSAT): 3588(3588/0)
Jun 01, 2018 1:01:12 AM fr.lip6.move.gal.gal2smt.bmc.NecessaryEnablingsolver printStats
INFO: Computation of co-enabling matrix(36/353) took 9392 ms. Total solver calls (SAT/UNSAT): 5291(5291/0)
Jun 01, 2018 1:01:15 AM fr.lip6.move.gal.gal2smt.bmc.NecessaryEnablingsolver printStats
INFO: Computation of co-enabling matrix(55/353) took 12510 ms. Total solver calls (SAT/UNSAT): 7476(7476/0)
Jun 01, 2018 1:01:18 AM fr.lip6.move.gal.gal2smt.bmc.NecessaryEnablingsolver printStats
INFO: Computation of co-enabling matrix(76/353) took 15621 ms. Total solver calls (SAT/UNSAT): 9471(9471/0)
Jun 01, 2018 1:01:21 AM fr.lip6.move.gal.gal2smt.bmc.NecessaryEnablingsolver printStats
INFO: Computation of co-enabling matrix(96/353) took 18624 ms. Total solver calls (SAT/UNSAT): 10961(10961/0)
Jun 01, 2018 1:01:24 AM fr.lip6.move.gal.gal2smt.bmc.NecessaryEnablingsolver printStats
INFO: Computation of co-enabling matrix(117/353) took 21626 ms. Total solver calls (SAT/UNSAT): 12095(12095/0)
Jun 01, 2018 1:01:27 AM fr.lip6.move.gal.gal2smt.bmc.NecessaryEnablingsolver printStats
INFO: Computation of co-enabling matrix(150/353) took 24677 ms. Total solver calls (SAT/UNSAT): 12986(12986/0)
Jun 01, 2018 1:01:30 AM fr.lip6.move.gal.gal2smt.bmc.NecessaryEnablingsolver printStats
INFO: Computation of co-enabling matrix(195/353) took 27687 ms. Total solver calls (SAT/UNSAT): 13046(13046/0)
Jun 01, 2018 1:01:33 AM fr.lip6.move.gal.gal2smt.bmc.NecessaryEnablingsolver printStats
INFO: Computation of co-enabling matrix(278/353) took 30876 ms. Total solver calls (SAT/UNSAT): 13046(13046/0)
Jun 01, 2018 1:01:36 AM fr.lip6.move.gal.gal2smt.bmc.NecessaryEnablingsolver printStats
INFO: Computation of co-enabling matrix(340/353) took 33885 ms. Total solver calls (SAT/UNSAT): 13046(13046/0)
Jun 01, 2018 1:01:37 AM fr.lip6.move.gal.gal2smt.bmc.NecessaryEnablingsolver printStats
INFO: Computation of Finished co-enabling matrix. took 34394 ms. Total solver calls (SAT/UNSAT): 13048(13048/0)
Jun 01, 2018 1:01:37 AM fr.lip6.move.gal.gal2smt.bmc.NecessaryEnablingsolver computeDoNotAccord
INFO: Computing Do-Not-Accords matrix : 353 transitions.
Jun 01, 2018 1:01:41 AM fr.lip6.move.gal.gal2smt.bmc.NextBMCSolver checkSat
WARNING: SMT solver unexpectedly returned 'unknown' answer, retrying.
Jun 01, 2018 1:05:40 AM fr.lip6.move.gal.gal2smt.bmc.NextBMCSolver checkSat
WARNING: SMT solver unexpectedly returned 'unknown' answer, retrying.
Jun 01, 2018 1:07:16 AM fr.lip6.move.gal.gal2smt.bmc.NextBMCSolver checkSat
WARNING: SMT solver unexpectedly returned 'unknown' answer, retrying.
Jun 01, 2018 1:13:16 AM fr.lip6.move.gal.gal2smt.bmc.NextBMCSolver checkSat
WARNING: SMT solver unexpectedly returned 'unknown' answer, retrying.
Jun 01, 2018 1:16:25 AM fr.lip6.move.gal.gal2smt.bmc.NextBMCSolver checkSat
WARNING: SMT solver unexpectedly returned 'unknown' answer, retrying.
Jun 01, 2018 1:18:18 AM fr.lip6.move.gal.gal2smt.bmc.NextBMCSolver checkSat
WARNING: SMT solver unexpectedly returned 'unknown' answer, retrying.
Jun 01, 2018 1:20:11 AM fr.lip6.move.gal.gal2smt.bmc.NextBMCSolver checkSat
WARNING: SMT solver unexpectedly returned 'unknown' answer, retrying.
Jun 01, 2018 1:22:02 AM fr.lip6.move.gal.gal2smt.bmc.NextBMCSolver checkSat
WARNING: SMT solver unexpectedly returned 'unknown' answer, retrying.
Jun 01, 2018 1:23:37 AM fr.lip6.move.gal.gal2smt.bmc.NextBMCSolver checkSat
WARNING: SMT solver unexpectedly returned 'unknown' answer, retrying.
Jun 01, 2018 1:25:15 AM fr.lip6.move.gal.gal2smt.bmc.NextBMCSolver checkSat
WARNING: SMT solver unexpectedly returned 'unknown' answer, retrying.
Jun 01, 2018 1:26:54 AM fr.lip6.move.gal.gal2smt.bmc.NextBMCSolver checkSat
WARNING: SMT solver unexpectedly returned 'unknown' answer, retrying.
Skipping mayMatrices nes/nds SMT solver raised an exception or timeout :(error "Solver has unexpectedly terminated")
java.lang.RuntimeException: SMT solver raised an exception or timeout :(error "Solver has unexpectedly terminated")
at fr.lip6.move.gal.gal2smt.bmc.NextBMCSolver.checkSat(NextBMCSolver.java:297)
at fr.lip6.move.gal.gal2smt.bmc.NecessaryEnablingsolver.computeDoNotAccord(NecessaryEnablingsolver.java:628)
at fr.lip6.move.gal.gal2pins.Gal2PinsTransformerNext.printLabels(Gal2PinsTransformerNext.java:538)
at fr.lip6.move.gal.gal2pins.Gal2PinsTransformerNext.printDependencyMatrix(Gal2PinsTransformerNext.java:209)
at fr.lip6.move.gal.gal2pins.Gal2PinsTransformerNext.buildBodyFile(Gal2PinsTransformerNext.java:85)
at fr.lip6.move.gal.gal2pins.Gal2PinsTransformerNext.transform(Gal2PinsTransformerNext.java:830)
at fr.lip6.move.gal.application.LTSminRunner$1.run(LTSminRunner.java:71)
at java.lang.Thread.run(Thread.java:748)
Jun 01, 2018 1:28:14 AM fr.lip6.move.gal.gal2pins.Gal2PinsTransformerNext transform
INFO: Built C files in 1641474ms conformant to PINS in folder :/home/mcc/execution

cc1: out of memory allocating 2548800 bytes after a total of 22540288 bytes
java.lang.RuntimeException: Could not compile executable .CommandLine [args=[gcc, -c, -I/home/mcc/BenchKit//lts_install_dir//include, -I., -std=c99, -fPIC, -O3, model.c], workingDir=/home/mcc/execution]
at fr.lip6.move.gal.application.LTSminRunner.compilePINS(LTSminRunner.java:241)
at fr.lip6.move.gal.application.LTSminRunner.access$6(LTSminRunner.java:224)
at fr.lip6.move.gal.application.LTSminRunner$1.run(LTSminRunner.java:75)
at java.lang.Thread.run(Thread.java:748)
ITS-tools command line returned an error code 1

Sequence of Actions to be Executed by the VM

This is useful if one wants to reexecute the tool in the VM from the submitted image disk.

set -x
# this is for BenchKit: configuration of major elements for the test
export BK_INPUT="QuasiCertifProtocol-COL-22"
export BK_EXAMINATION="ReachabilityDeadlock"
export BK_TOOL="itstools"
export BK_RESULT_DIR="/tmp/BK_RESULTS/OUTPUTS"
export BK_TIME_CONFINEMENT="3600"
export BK_MEMORY_CONFINEMENT="16384"

# this is specific to your benchmark or test

export BIN_DIR="$HOME/BenchKit/bin"

# remove the execution directoty if it exists (to avoid increse of .vmdk images)
if [ -d execution ] ; then
rm -rf execution
fi

tar xzf /home/mcc/BenchKit/INPUTS/QuasiCertifProtocol-COL-22.tgz
mv QuasiCertifProtocol-COL-22 execution
cd execution
pwd
ls -lh

# this is for BenchKit: explicit launching of the test
echo "====================================================================="
echo " Generated by BenchKit 2-3637"
echo " Executing tool itstools"
echo " Input is QuasiCertifProtocol-COL-22, examination is ReachabilityDeadlock"
echo " Time confinement is $BK_TIME_CONFINEMENT seconds"
echo " Memory confinement is 16384 MBytes"
echo " Number of cores is 4"
echo " Run identifier is r140-qhx2-152673581800041"
echo "====================================================================="
echo
echo "--------------------"
echo "content from stdout:"
echo
echo "=== Data for post analysis generated by BenchKit (invocation template)"
echo
if [ "ReachabilityDeadlock" = "UpperBounds" ] ; then
echo "The expected result is a vector of positive values"
echo NUM_VECTOR
elif [ "ReachabilityDeadlock" != "StateSpace" ] ; then
echo "The expected result is a vector of booleans"
echo BOOL_VECTOR
else
echo "no data necessary for post analysis"
fi
echo
if [ -f "ReachabilityDeadlock.txt" ] ; then
echo "here is the order used to build the result vector(from text file)"
for x in $(grep Property ReachabilityDeadlock.txt | cut -d ' ' -f 2 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ -f "ReachabilityDeadlock.xml" ] ; then # for cunf (txt files deleted;-)
echo echo "here is the order used to build the result vector(from xml file)"
for x in $(grep '' ReachabilityDeadlock.xml | cut -d '>' -f 2 | cut -d '<' -f 1 | sort -u) ; do
echo "FORMULA_NAME $x"
done
fi
echo
echo "=== Now, execution of the tool begins"
echo
echo -n "BK_START "
date -u +%s%3N
echo
timeout -s 9 $BK_TIME_CONFINEMENT bash -c "/home/mcc/BenchKit/BenchKit_head.sh 2> STDERR ; echo ; echo -n \"BK_STOP \" ; date -u +%s%3N"
if [ $? -eq 137 ] ; then
echo
echo "BK_TIME_CONFINEMENT_REACHED"
fi
echo
echo "--------------------"
echo "content from stderr:"
echo
cat STDERR ;