Execution Chart

We display below the execution chart for this examination (boot time has been removed).

Trace from the execution

Waiting for the VM to be ready (probing ssh)
...................
/home/mcc/execution
total 4.1M
-rw-r--r-- 1 mcc users 9.9K May 15 18:54 CTLCardinality.txt
-rw-r--r-- 1 mcc users 34K May 15 18:54 CTLCardinality.xml
-rw-r--r-- 1 mcc users 54K May 15 18:54 CTLFireability.txt
-rw-r--r-- 1 mcc users 176K May 15 18:54 CTLFireability.xml
-rw-r--r-- 1 mcc users 4.0K May 15 18:50 GenericPropertiesDefinition.xml
-rw-r--r-- 1 mcc users 5.9K May 15 18:50 GenericPropertiesVerdict.xml
-rw-r--r-- 1 mcc users 4.2K May 15 18:54 LTLCardinality.txt
-rw-r--r-- 1 mcc users 14K May 15 18:54 LTLCardinality.xml
-rw-r--r-- 1 mcc users 4.5K May 15 18:54 LTLFireability.txt
-rw-r--r-- 1 mcc users 17K May 15 18:54 LTLFireability.xml
-rw-r--r-- 1 mcc users 8.9K May 15 18:54 ReachabilityCardinality.txt
-rw-r--r-- 1 mcc users 33K May 15 18:54 ReachabilityCardinality.xml
-rw-r--r-- 1 mcc users 113 May 15 18:54 ReachabilityDeadlock.txt
-rw-r--r-- 1 mcc users 351 May 15 18:54 ReachabilityDeadlock.xml
-rw-r--r-- 1 mcc users 9.0K May 15 18:54 ReachabilityFireability.txt
-rw-r--r-- 1 mcc users 36K May 15 18:54 ReachabilityFireability.xml
-rw-r--r-- 1 mcc users 2.9K May 15 18:54 UpperBounds.txt
-rw-r--r-- 1 mcc users 5.8K May 15 18:54 UpperBounds.xml
-rw-r--r-- 1 mcc users 5 May 15 18:50 equiv_col
-rw-r--r-- 1 mcc users 10 May 15 18:50 instance
-rw-r--r-- 1 mcc users 6 May 15 18:50 iscolored
-rw-r--r-- 1 mcc users 3.6M May 15 18:50 model.pnml
=====================================================================
Generated by BenchKit 2-3637
Executing tool itstoolsl
Input is PolyORBLF-PT-S04J04T06, examination is CTLFireability
Time confinement is 3600 seconds
Memory confinement is 16384 MBytes
Number of cores is 4
Run identifier is r129-smll-152673531500179
=====================================================================

--------------------
content from stdout:

=== Data for post analysis generated by BenchKit (invocation template)

The expected result is a vector of booleans
BOOL_VECTOR

here is the order used to build the result vector(from text file)
FORMULA_NAME PolyORBLF-PT-S04J04T06-CTLFireability-00
FORMULA_NAME PolyORBLF-PT-S04J04T06-CTLFireability-01
FORMULA_NAME PolyORBLF-PT-S04J04T06-CTLFireability-02
FORMULA_NAME PolyORBLF-PT-S04J04T06-CTLFireability-03
FORMULA_NAME PolyORBLF-PT-S04J04T06-CTLFireability-04
FORMULA_NAME PolyORBLF-PT-S04J04T06-CTLFireability-05
FORMULA_NAME PolyORBLF-PT-S04J04T06-CTLFireability-06
FORMULA_NAME PolyORBLF-PT-S04J04T06-CTLFireability-07
FORMULA_NAME PolyORBLF-PT-S04J04T06-CTLFireability-08
FORMULA_NAME PolyORBLF-PT-S04J04T06-CTLFireability-09
FORMULA_NAME PolyORBLF-PT-S04J04T06-CTLFireability-10
FORMULA_NAME PolyORBLF-PT-S04J04T06-CTLFireability-11
FORMULA_NAME PolyORBLF-PT-S04J04T06-CTLFireability-12
FORMULA_NAME PolyORBLF-PT-S04J04T06-CTLFireability-13
FORMULA_NAME PolyORBLF-PT-S04J04T06-CTLFireability-14
FORMULA_NAME PolyORBLF-PT-S04J04T06-CTLFireability-15

=== Now, execution of the tool begins

BK_START 1527414561636

Converted graph to binary with : CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.louvain.binaries_1.0.0.201805241334/bin/convert-linux64, -i, /tmp/graph8973401601328313342.txt, -o, /tmp/graph8973401601328313342.bin, -w, /tmp/graph8973401601328313342.weights], workingDir=null]
Built communities with : CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.louvain.binaries_1.0.0.201805241334/bin/louvain-linux64, /tmp/graph8973401601328313342.bin, -l, -1, -v, -w, /tmp/graph8973401601328313342.weights, -q, 0, -e, 0.001], workingDir=null]
Invoking ITS tools like this :CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.201805241334/bin/its-ctl-linux64, --gc-threshold, 2000000, --quiet, -i, /home/mcc/execution/CTLFireability.pnml.gal, -t, CGAL, -ctl, /home/mcc/execution/CTLFireability.ctl], workingDir=/home/mcc/execution]

its-ctl command run as :

/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.201805241334/bin/its-ctl-linux64 --gc-threshold 2000000 --quiet -i /home/mcc/execution/CTLFireability.pnml.gal -t CGAL -ctl /home/mcc/execution/CTLFireability.ctl
No direction supplied, using forward translation only.
Parsed 16 CTL formulae.
built 17 ordering constraints for composite.
built 308 ordering constraints for composite.
built 300 ordering constraints for composite.
built 80 ordering constraints for composite.
built 374 ordering constraints for composite.
built 2191 ordering constraints for composite.
terminate called after throwing an instance of 'std::bad_alloc'
what(): std::bad_alloc

BK_STOP 1527415213637

--------------------
content from stderr:

+ export BINDIR=/home/mcc/BenchKit/
+ BINDIR=/home/mcc/BenchKit/
++ pwd
+ export MODEL=/home/mcc/execution
+ MODEL=/home/mcc/execution
+ /home/mcc/BenchKit//runeclipse.sh /home/mcc/execution CTLFireability -its -ltsminpath /home/mcc/BenchKit//lts_install_dir/ -louvain -smt
+ ulimit -s 65536
+ [[ -z '' ]]
+ export LTSMIN_MEM_SIZE=8589934592
+ LTSMIN_MEM_SIZE=8589934592
+ /home/mcc/BenchKit//itstools/its-tools -consoleLog -data /home/mcc/execution/workspace -pnfolder /home/mcc/execution -examination CTLFireability -z3path /home/mcc/BenchKit//z3/bin/z3 -yices2path /home/mcc/BenchKit//yices/bin/yices -its -ltsminpath /home/mcc/BenchKit//lts_install_dir/ -louvain -smt -vmargs -Dosgi.locking=none -Declipse.stateSaveDelayInterval=-1 -Dosgi.configuration.area=/tmp/.eclipse -Xss8m -Xms40m -Xmx8192m -Dfile.encoding=UTF-8 -Dosgi.requiredJavaVersion=1.6
May 27, 2018 9:49:23 AM fr.lip6.move.gal.application.Application start
INFO: Running its-tools with arguments : [-pnfolder, /home/mcc/execution, -examination, CTLFireability, -z3path, /home/mcc/BenchKit//z3/bin/z3, -yices2path, /home/mcc/BenchKit//yices/bin/yices, -its, -ltsminpath, /home/mcc/BenchKit//lts_install_dir/, -louvain, -smt]
May 27, 2018 9:49:23 AM fr.lip6.move.gal.application.MccTranslator transformPNML
INFO: Parsing pnml file : /home/mcc/execution/model.pnml
May 27, 2018 9:49:23 AM fr.lip6.move.gal.nupn.PTNetReader loadFromXML
INFO: Load time of PNML (sax parser for PT used): 365 ms
May 27, 2018 9:49:23 AM fr.lip6.move.gal.pnml.togal.PTGALTransformer handlePage
INFO: Transformed 554 places.
May 27, 2018 9:49:24 AM fr.lip6.move.gal.pnml.togal.PTGALTransformer handlePage
INFO: Transformed 2998 transitions.
May 27, 2018 9:49:25 AM fr.lip6.move.gal.application.MccTranslator applyOrder
INFO: Applying decomposition
May 27, 2018 9:49:25 AM fr.lip6.move.gal.instantiate.GALRewriter flatten
INFO: Flatten gal took : 841 ms
May 27, 2018 9:49:26 AM fr.lip6.move.gal.instantiate.GALRewriter flatten
INFO: Flatten gal took : 565 ms
Begin: Sun May 27 09:49:27 2018

Computation of communities with the Newman-Girvan Modularity quality function

level 0:
start computation: Sun May 27 09:49:27 2018
network size: 554 nodes, 4982 links, 5996 weight
quality increased from -0.0248134 to 0.305679
end computation: Sun May 27 09:49:27 2018
level 1:
start computation: Sun May 27 09:49:27 2018
network size: 69 nodes, 563 links, 5996 weight
quality increased from 0.305679 to 0.396764
end computation: Sun May 27 09:49:27 2018
level 2:
start computation: Sun May 27 09:49:27 2018
network size: 10 nodes, 56 links, 5996 weight
quality increased from 0.396764 to 0.397861
end computation: Sun May 27 09:49:27 2018
level 3:
start computation: Sun May 27 09:49:27 2018
network size: 5 nodes, 23 links, 5996 weight
quality increased from 0.397861 to 0.397861
end computation: Sun May 27 09:49:27 2018
End: Sun May 27 09:49:27 2018
Total duration: 0 sec
0.397861
May 27, 2018 9:49:28 AM fr.lip6.move.gal.instantiate.CompositeBuilder decomposeWithOrder
INFO: Decomposing Gal with order
May 27, 2018 9:49:28 AM fr.lip6.move.gal.instantiate.GALRewriter flatten
INFO: Flatten gal took : 602 ms
May 27, 2018 9:49:28 AM fr.lip6.move.gal.instantiate.CompositeBuilder rewriteArraysToAllowPartition
INFO: Rewriting arrays to variables to allow decomposition.
May 27, 2018 9:49:33 AM fr.lip6.move.gal.instantiate.Instantiator fuseIsomorphicEffects
INFO: Removed a total of 8266 redundant transitions.
May 27, 2018 9:49:33 AM fr.lip6.move.serialization.SerializationUtil systemToFile
INFO: Time to serialize gal into /home/mcc/execution/CTLFireability.pnml.gal : 52 ms
May 27, 2018 9:49:33 AM fr.lip6.move.serialization.SerializationUtil serializePropertiesForITSCTLTools
INFO: Time to serialize properties into /home/mcc/execution/CTLFireability.ctl : 57 ms
ITS-tools command line returned an error code 134

Sequence of Actions to be Executed by the VM

This is useful if one wants to reexecute the tool in the VM from the submitted image disk.

set -x
# this is for BenchKit: configuration of major elements for the test
export BK_INPUT="PolyORBLF-PT-S04J04T06"
export BK_EXAMINATION="CTLFireability"
export BK_TOOL="itstoolsl"
export BK_RESULT_DIR="/tmp/BK_RESULTS/OUTPUTS"
export BK_TIME_CONFINEMENT="3600"
export BK_MEMORY_CONFINEMENT="16384"

# this is specific to your benchmark or test

export BIN_DIR="$HOME/BenchKit/bin"

# remove the execution directoty if it exists (to avoid increse of .vmdk images)
if [ -d execution ] ; then
rm -rf execution
fi

tar xzf /home/mcc/BenchKit/INPUTS/PolyORBLF-PT-S04J04T06.tgz
mv PolyORBLF-PT-S04J04T06 execution
cd execution
pwd
ls -lh

# this is for BenchKit: explicit launching of the test
echo "====================================================================="
echo " Generated by BenchKit 2-3637"
echo " Executing tool itstoolsl"
echo " Input is PolyORBLF-PT-S04J04T06, examination is CTLFireability"
echo " Time confinement is $BK_TIME_CONFINEMENT seconds"
echo " Memory confinement is 16384 MBytes"
echo " Number of cores is 4"
echo " Run identifier is r129-smll-152673531500179"
echo "====================================================================="
echo
echo "--------------------"
echo "content from stdout:"
echo
echo "=== Data for post analysis generated by BenchKit (invocation template)"
echo
if [ "CTLFireability" = "UpperBounds" ] ; then
echo "The expected result is a vector of positive values"
echo NUM_VECTOR
elif [ "CTLFireability" != "StateSpace" ] ; then
echo "The expected result is a vector of booleans"
echo BOOL_VECTOR
else
echo "no data necessary for post analysis"
fi
echo
if [ -f "CTLFireability.txt" ] ; then
echo "here is the order used to build the result vector(from text file)"
for x in $(grep Property CTLFireability.txt | cut -d ' ' -f 2 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ -f "CTLFireability.xml" ] ; then # for cunf (txt files deleted;-)
echo echo "here is the order used to build the result vector(from xml file)"
for x in $(grep '' CTLFireability.xml | cut -d '>' -f 2 | cut -d '<' -f 1 | sort -u) ; do
echo "FORMULA_NAME $x"
done
fi
echo
echo "=== Now, execution of the tool begins"
echo
echo -n "BK_START "
date -u +%s%3N
echo
timeout -s 9 $BK_TIME_CONFINEMENT bash -c "/home/mcc/BenchKit/BenchKit_head.sh 2> STDERR ; echo ; echo -n \"BK_STOP \" ; date -u +%s%3N"
if [ $? -eq 137 ] ; then
echo
echo "BK_TIME_CONFINEMENT_REACHED"
fi
echo
echo "--------------------"
echo "content from stderr:"
echo
cat STDERR ;