Execution Chart

We display below the execution chart for this examination (boot time has been removed).

Trace from the execution

Waiting for the VM to be ready (probing ssh)
..................
/home/mcc/execution
total 30M
-rw-r--r-- 1 mcc users 5.1K May 15 18:54 CTLCardinality.txt
-rw-r--r-- 1 mcc users 24K May 15 18:54 CTLCardinality.xml
-rw-r--r-- 1 mcc users 4.0K May 15 18:54 CTLFireability.txt
-rw-r--r-- 1 mcc users 18K May 15 18:54 CTLFireability.xml
-rw-r--r-- 1 mcc users 4.0K May 15 18:50 GenericPropertiesDefinition.xml
-rw-r--r-- 1 mcc users 5.6K May 15 18:50 GenericPropertiesVerdict.xml
-rw-r--r-- 1 mcc users 3.1K May 15 18:54 LTLCardinality.txt
-rw-r--r-- 1 mcc users 13K May 15 18:54 LTLCardinality.xml
-rw-r--r-- 1 mcc users 2.4K May 15 18:54 LTLFireability.txt
-rw-r--r-- 1 mcc users 7.6K May 15 18:54 LTLFireability.xml
-rw-r--r-- 1 mcc users 4.2K May 15 18:54 ReachabilityCardinality.txt
-rw-r--r-- 1 mcc users 18K May 15 18:54 ReachabilityCardinality.xml
-rw-r--r-- 1 mcc users 117 May 15 18:54 ReachabilityDeadlock.txt
-rw-r--r-- 1 mcc users 355 May 15 18:54 ReachabilityDeadlock.xml
-rw-r--r-- 1 mcc users 4.9K May 15 18:54 ReachabilityFireability.txt
-rw-r--r-- 1 mcc users 20K May 15 18:54 ReachabilityFireability.xml
-rw-r--r-- 1 mcc users 1.9K May 15 18:54 UpperBounds.txt
-rw-r--r-- 1 mcc users 4.0K May 15 18:54 UpperBounds.xml
-rw-r--r-- 1 mcc users 6 May 15 18:50 equiv_col
-rw-r--r-- 1 mcc users 9 May 15 18:50 instance
-rw-r--r-- 1 mcc users 6 May 15 18:50 iscolored
-rw-r--r-- 1 mcc users 30M May 15 18:50 model.pnml
=====================================================================
Generated by BenchKit 2-3637
Executing tool itstoolsl
Input is PhaseVariation-PT-D30CS100, examination is CTLFireability
Time confinement is 3600 seconds
Memory confinement is 16384 MBytes
Number of cores is 4
Run identifier is r117-csrt-152666477300662
=====================================================================

--------------------
content from stdout:

=== Data for post analysis generated by BenchKit (invocation template)

The expected result is a vector of booleans
BOOL_VECTOR

here is the order used to build the result vector(from text file)
FORMULA_NAME PhaseVariation-PT-D30CS100-CTLFireability-00
FORMULA_NAME PhaseVariation-PT-D30CS100-CTLFireability-01
FORMULA_NAME PhaseVariation-PT-D30CS100-CTLFireability-02
FORMULA_NAME PhaseVariation-PT-D30CS100-CTLFireability-03
FORMULA_NAME PhaseVariation-PT-D30CS100-CTLFireability-04
FORMULA_NAME PhaseVariation-PT-D30CS100-CTLFireability-05
FORMULA_NAME PhaseVariation-PT-D30CS100-CTLFireability-06
FORMULA_NAME PhaseVariation-PT-D30CS100-CTLFireability-07
FORMULA_NAME PhaseVariation-PT-D30CS100-CTLFireability-08
FORMULA_NAME PhaseVariation-PT-D30CS100-CTLFireability-09
FORMULA_NAME PhaseVariation-PT-D30CS100-CTLFireability-10
FORMULA_NAME PhaseVariation-PT-D30CS100-CTLFireability-11
FORMULA_NAME PhaseVariation-PT-D30CS100-CTLFireability-12
FORMULA_NAME PhaseVariation-PT-D30CS100-CTLFireability-13
FORMULA_NAME PhaseVariation-PT-D30CS100-CTLFireability-14
FORMULA_NAME PhaseVariation-PT-D30CS100-CTLFireability-15

=== Now, execution of the tool begins

BK_START 1527269896463

Converted graph to binary with : CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.louvain.binaries_1.0.0.201805241334/bin/convert-linux64, -i, /tmp/graph1282285368802080596.txt, -o, /tmp/graph1282285368802080596.bin, -w, /tmp/graph1282285368802080596.weights], workingDir=null]
Built communities with : CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.louvain.binaries_1.0.0.201805241334/bin/louvain-linux64, /tmp/graph1282285368802080596.bin, -l, -1, -v, -w, /tmp/graph1282285368802080596.weights, -q, 0, -e, 0.001], workingDir=null]
Invoking ITS tools like this :CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.201805241334/bin/its-ctl-linux64, --gc-threshold, 2000000, --quiet, -i, /home/mcc/execution/CTLFireability.pnml.gal, -t, CGAL, -ctl, /home/mcc/execution/CTLFireability.ctl], workingDir=/home/mcc/execution]

its-ctl command run as :

/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.201805241334/bin/its-ctl-linux64 --gc-threshold 2000000 --quiet -i /home/mcc/execution/CTLFireability.pnml.gal -t CGAL -ctl /home/mcc/execution/CTLFireability.ctl
No direction supplied, using forward translation only.
Parsed 16 CTL formulae.
built 76 ordering constraints for composite.
built 1128 ordering constraints for composite.
built 1368 ordering constraints for composite.
built 972 ordering constraints for composite.
built 2204 ordering constraints for composite.
built 832 ordering constraints for composite.
built 1084 ordering constraints for composite.
built 1328 ordering constraints for composite.
built 1572 ordering constraints for composite.
built 1164 ordering constraints for composite.
built 1484 ordering constraints for composite.
built 30976 ordering constraints for composite.
built 864 ordering constraints for composite.
built 908 ordering constraints for composite.
built 1384 ordering constraints for composite.
built 1560 ordering constraints for composite.
built 2068 ordering constraints for composite.
built 744 ordering constraints for composite.
built 928 ordering constraints for composite.
built 1892 ordering constraints for composite.
built 1788 ordering constraints for composite.
built 1556 ordering constraints for composite.
built 660 ordering constraints for composite.
built 1708 ordering constraints for composite.
built 1508 ordering constraints for composite.
built 1312 ordering constraints for composite.
terminate called after throwing an instance of 'std::bad_alloc'
what(): std::bad_alloc

BK_STOP 1527271566719

--------------------
content from stderr:

+ export BINDIR=/home/mcc/BenchKit/
+ BINDIR=/home/mcc/BenchKit/
++ pwd
+ export MODEL=/home/mcc/execution
+ MODEL=/home/mcc/execution
+ /home/mcc/BenchKit//runeclipse.sh /home/mcc/execution CTLFireability -its -ltsminpath /home/mcc/BenchKit//lts_install_dir/ -louvain -smt
+ ulimit -s 65536
+ [[ -z '' ]]
+ export LTSMIN_MEM_SIZE=8589934592
+ LTSMIN_MEM_SIZE=8589934592
+ /home/mcc/BenchKit//itstools/its-tools -consoleLog -data /home/mcc/execution/workspace -pnfolder /home/mcc/execution -examination CTLFireability -z3path /home/mcc/BenchKit//z3/bin/z3 -yices2path /home/mcc/BenchKit//yices/bin/yices -its -ltsminpath /home/mcc/BenchKit//lts_install_dir/ -louvain -smt -vmargs -Dosgi.locking=none -Declipse.stateSaveDelayInterval=-1 -Dosgi.configuration.area=/tmp/.eclipse -Xss8m -Xms40m -Xmx8192m -Dfile.encoding=UTF-8 -Dosgi.requiredJavaVersion=1.6
May 25, 2018 5:38:18 PM fr.lip6.move.gal.application.Application start
INFO: Running its-tools with arguments : [-pnfolder, /home/mcc/execution, -examination, CTLFireability, -z3path, /home/mcc/BenchKit//z3/bin/z3, -yices2path, /home/mcc/BenchKit//yices/bin/yices, -its, -ltsminpath, /home/mcc/BenchKit//lts_install_dir/, -louvain, -smt]
May 25, 2018 5:38:18 PM fr.lip6.move.gal.application.MccTranslator transformPNML
INFO: Parsing pnml file : /home/mcc/execution/model.pnml
May 25, 2018 5:38:19 PM fr.lip6.move.gal.nupn.PTNetReader loadFromXML
INFO: Load time of PNML (sax parser for PT used): 1276 ms
May 25, 2018 5:38:19 PM fr.lip6.move.gal.pnml.togal.PTGALTransformer handlePage
INFO: Transformed 2702 places.
May 25, 2018 5:38:21 PM fr.lip6.move.gal.pnml.togal.PTGALTransformer handlePage
INFO: Transformed 30977 transitions.
May 25, 2018 5:38:21 PM fr.lip6.move.gal.application.MccTranslator applyOrder
INFO: Applying decomposition
May 25, 2018 5:38:26 PM fr.lip6.move.gal.instantiate.GALRewriter flatten
INFO: Flatten gal took : 5081 ms
May 25, 2018 5:38:30 PM fr.lip6.move.gal.instantiate.GALRewriter flatten
INFO: Flatten gal took : 3214 ms
Begin: Fri May 25 17:38:34 2018

Computation of communities with the Newman-Girvan Modularity quality function

level 0:
start computation: Fri May 25 17:38:34 2018
network size: 2702 nodes, 41778 links, 61952 weight
quality increased from -0.0978751 to 0.153259
end computation: Fri May 25 17:38:34 2018
level 1:
start computation: Fri May 25 17:38:34 2018
network size: 783 nodes, 8547 links, 61952 weight
quality increased from 0.153259 to 0.222449
end computation: Fri May 25 17:38:34 2018
level 2:
start computation: Fri May 25 17:38:34 2018
network size: 105 nodes, 799 links, 61952 weight
quality increased from 0.222449 to 0.238202
end computation: Fri May 25 17:38:34 2018
level 3:
start computation: Fri May 25 17:38:34 2018
network size: 31 nodes, 221 links, 61952 weight
quality increased from 0.238202 to 0.238918
end computation: Fri May 25 17:38:34 2018
level 4:
start computation: Fri May 25 17:38:34 2018
network size: 25 nodes, 175 links, 61952 weight
quality increased from 0.238918 to 0.238918
end computation: Fri May 25 17:38:34 2018
End: Fri May 25 17:38:34 2018
Total duration: 0 sec
0.238918
May 25, 2018 5:38:35 PM fr.lip6.move.gal.instantiate.CompositeBuilder decomposeWithOrder
INFO: Decomposing Gal with order
May 25, 2018 5:38:39 PM fr.lip6.move.gal.instantiate.GALRewriter flatten
INFO: Flatten gal took : 4757 ms
May 25, 2018 5:38:39 PM fr.lip6.move.gal.instantiate.CompositeBuilder rewriteArraysToAllowPartition
INFO: Rewriting arrays to variables to allow decomposition.
May 25, 2018 5:45:23 PM fr.lip6.move.gal.instantiate.Instantiator fuseIsomorphicEffects
INFO: Removed a total of 81343 redundant transitions.
May 25, 2018 5:45:24 PM fr.lip6.move.serialization.SerializationUtil systemToFile
INFO: Time to serialize gal into /home/mcc/execution/CTLFireability.pnml.gal : 317 ms
May 25, 2018 5:45:24 PM fr.lip6.move.serialization.SerializationUtil serializePropertiesForITSCTLTools
INFO: Time to serialize properties into /home/mcc/execution/CTLFireability.ctl : 33 ms
ITS-tools command line returned an error code 134

Sequence of Actions to be Executed by the VM

This is useful if one wants to reexecute the tool in the VM from the submitted image disk.

set -x
# this is for BenchKit: configuration of major elements for the test
export BK_INPUT="PhaseVariation-PT-D30CS100"
export BK_EXAMINATION="CTLFireability"
export BK_TOOL="itstoolsl"
export BK_RESULT_DIR="/tmp/BK_RESULTS/OUTPUTS"
export BK_TIME_CONFINEMENT="3600"
export BK_MEMORY_CONFINEMENT="16384"

# this is specific to your benchmark or test

export BIN_DIR="$HOME/BenchKit/bin"

# remove the execution directoty if it exists (to avoid increse of .vmdk images)
if [ -d execution ] ; then
rm -rf execution
fi

tar xzf /home/mcc/BenchKit/INPUTS/PhaseVariation-PT-D30CS100.tgz
mv PhaseVariation-PT-D30CS100 execution
cd execution
pwd
ls -lh

# this is for BenchKit: explicit launching of the test
echo "====================================================================="
echo " Generated by BenchKit 2-3637"
echo " Executing tool itstoolsl"
echo " Input is PhaseVariation-PT-D30CS100, examination is CTLFireability"
echo " Time confinement is $BK_TIME_CONFINEMENT seconds"
echo " Memory confinement is 16384 MBytes"
echo " Number of cores is 4"
echo " Run identifier is r117-csrt-152666477300662"
echo "====================================================================="
echo
echo "--------------------"
echo "content from stdout:"
echo
echo "=== Data for post analysis generated by BenchKit (invocation template)"
echo
if [ "CTLFireability" = "UpperBounds" ] ; then
echo "The expected result is a vector of positive values"
echo NUM_VECTOR
elif [ "CTLFireability" != "StateSpace" ] ; then
echo "The expected result is a vector of booleans"
echo BOOL_VECTOR
else
echo "no data necessary for post analysis"
fi
echo
if [ -f "CTLFireability.txt" ] ; then
echo "here is the order used to build the result vector(from text file)"
for x in $(grep Property CTLFireability.txt | cut -d ' ' -f 2 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ -f "CTLFireability.xml" ] ; then # for cunf (txt files deleted;-)
echo echo "here is the order used to build the result vector(from xml file)"
for x in $(grep '' CTLFireability.xml | cut -d '>' -f 2 | cut -d '<' -f 1 | sort -u) ; do
echo "FORMULA_NAME $x"
done
fi
echo
echo "=== Now, execution of the tool begins"
echo
echo -n "BK_START "
date -u +%s%3N
echo
timeout -s 9 $BK_TIME_CONFINEMENT bash -c "/home/mcc/BenchKit/BenchKit_head.sh 2> STDERR ; echo ; echo -n \"BK_STOP \" ; date -u +%s%3N"
if [ $? -eq 137 ] ; then
echo
echo "BK_TIME_CONFINEMENT_REACHED"
fi
echo
echo "--------------------"
echo "content from stderr:"
echo
cat STDERR ;