Execution Chart

We display below the execution chart for this examination (boot time has been removed).

Trace from the execution

Waiting for the VM to be ready (probing ssh)
.................
/home/mcc/execution
total 3.1M
-rw-r--r-- 1 mcc users 3.4K May 15 18:54 CTLCardinality.txt
-rw-r--r-- 1 mcc users 16K May 15 18:54 CTLCardinality.xml
-rw-r--r-- 1 mcc users 4.2K May 15 18:54 CTLFireability.txt
-rw-r--r-- 1 mcc users 19K May 15 18:54 CTLFireability.xml
-rw-r--r-- 1 mcc users 4.0K May 15 18:50 GenericPropertiesDefinition.xml
-rw-r--r-- 1 mcc users 5.6K May 15 18:50 GenericPropertiesVerdict.xml
-rw-r--r-- 1 mcc users 2.7K May 15 18:54 LTLCardinality.txt
-rw-r--r-- 1 mcc users 11K May 15 18:54 LTLCardinality.xml
-rw-r--r-- 1 mcc users 2.5K May 15 18:54 LTLFireability.txt
-rw-r--r-- 1 mcc users 8.6K May 15 18:54 LTLFireability.xml
-rw-r--r-- 1 mcc users 4.2K May 15 18:54 ReachabilityCardinality.txt
-rw-r--r-- 1 mcc users 18K May 15 18:54 ReachabilityCardinality.xml
-rw-r--r-- 1 mcc users 117 May 15 18:54 ReachabilityDeadlock.txt
-rw-r--r-- 1 mcc users 355 May 15 18:54 ReachabilityDeadlock.xml
-rw-r--r-- 1 mcc users 4.4K May 15 18:54 ReachabilityFireability.txt
-rw-r--r-- 1 mcc users 18K May 15 18:54 ReachabilityFireability.xml
-rw-r--r-- 1 mcc users 1.9K May 15 18:54 UpperBounds.txt
-rw-r--r-- 1 mcc users 3.9K May 15 18:54 UpperBounds.xml
-rw-r--r-- 1 mcc users 6 May 15 18:50 equiv_col
-rw-r--r-- 1 mcc users 9 May 15 18:50 instance
-rw-r--r-- 1 mcc users 6 May 15 18:50 iscolored
-rw-r--r-- 1 mcc users 2.9M May 15 18:50 model.pnml
=====================================================================
Generated by BenchKit 2-3637
Executing tool itstoolsl
Input is PhaseVariation-PT-D10CS100, examination is UpperBounds
Time confinement is 3600 seconds
Memory confinement is 16384 MBytes
Number of cores is 4
Run identifier is r117-csrt-152666477200632
=====================================================================

--------------------
content from stdout:

=== Data for post analysis generated by BenchKit (invocation template)

The expected result is a vector of positive values
NUM_VECTOR

here is the order used to build the result vector(from text file)
FORMULA_NAME PhaseVariation-PT-D10CS100-UpperBounds-00
FORMULA_NAME PhaseVariation-PT-D10CS100-UpperBounds-01
FORMULA_NAME PhaseVariation-PT-D10CS100-UpperBounds-02
FORMULA_NAME PhaseVariation-PT-D10CS100-UpperBounds-03
FORMULA_NAME PhaseVariation-PT-D10CS100-UpperBounds-04
FORMULA_NAME PhaseVariation-PT-D10CS100-UpperBounds-05
FORMULA_NAME PhaseVariation-PT-D10CS100-UpperBounds-06
FORMULA_NAME PhaseVariation-PT-D10CS100-UpperBounds-07
FORMULA_NAME PhaseVariation-PT-D10CS100-UpperBounds-08
FORMULA_NAME PhaseVariation-PT-D10CS100-UpperBounds-09
FORMULA_NAME PhaseVariation-PT-D10CS100-UpperBounds-10
FORMULA_NAME PhaseVariation-PT-D10CS100-UpperBounds-11
FORMULA_NAME PhaseVariation-PT-D10CS100-UpperBounds-12
FORMULA_NAME PhaseVariation-PT-D10CS100-UpperBounds-13
FORMULA_NAME PhaseVariation-PT-D10CS100-UpperBounds-14
FORMULA_NAME PhaseVariation-PT-D10CS100-UpperBounds-15

=== Now, execution of the tool begins

BK_START 1527267052675

Converted graph to binary with : CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.louvain.binaries_1.0.0.201805241334/bin/convert-linux64, -i, /tmp/graph7838774307650044696.txt, -o, /tmp/graph7838774307650044696.bin, -w, /tmp/graph7838774307650044696.weights], workingDir=null]
Built communities with : CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.louvain.binaries_1.0.0.201805241334/bin/louvain-linux64, /tmp/graph7838774307650044696.bin, -l, -1, -v, -w, /tmp/graph7838774307650044696.weights, -q, 0, -e, 0.001], workingDir=null]
Invoking ITS tools like this :CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.201805241334/bin/its-reach-linux64, --gc-threshold, 2000000, --quiet, -i, /home/mcc/execution/UpperBounds.pnml.gal, -t, CGAL, -reachable-file, UpperBounds.prop, --nowitness], workingDir=/home/mcc/execution]

its-reach command run as :

/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.201805241334/bin/its-reach-linux64 --gc-threshold 2000000 --quiet -i /home/mcc/execution/UpperBounds.pnml.gal -t CGAL -reachable-file UpperBounds.prop --nowitness
Loading property file UpperBounds.prop.
Read [bounds] property : PhaseVariation-PT-D10CS100-UpperBounds-00 with value :i6.u81.cell___8_4__A_
Read [bounds] property : PhaseVariation-PT-D10CS100-UpperBounds-01 with value :i2.u93.pool__4_4_
Read [bounds] property : PhaseVariation-PT-D10CS100-UpperBounds-02 with value :i9.u61.cell___4_10__B_
Read [bounds] property : PhaseVariation-PT-D10CS100-UpperBounds-03 with value :i8.u39.pool__1_1_
Read [bounds] property : PhaseVariation-PT-D10CS100-UpperBounds-04 with value :i3.u66.cell___5_6__A_
Read [bounds] property : PhaseVariation-PT-D10CS100-UpperBounds-05 with value :i0.u89.cell___9_7__A_
Read [bounds] property : PhaseVariation-PT-D10CS100-UpperBounds-06 with value :i1.u58.pool__3_6_
Read [bounds] property : PhaseVariation-PT-D10CS100-UpperBounds-07 with value :i4.u78.cell___7_7__A_
Read [bounds] property : PhaseVariation-PT-D10CS100-UpperBounds-08 with value :i2.u65.pool__5_1_
Read [bounds] property : PhaseVariation-PT-D10CS100-UpperBounds-09 with value :i2.u93.cell___8_10__A_
Read [bounds] property : PhaseVariation-PT-D10CS100-UpperBounds-10 with value :i2.u93.cell___5_3__B_
Read [bounds] property : PhaseVariation-PT-D10CS100-UpperBounds-11 with value :i8.u46.cell___2_1__A_
Read [bounds] property : PhaseVariation-PT-D10CS100-UpperBounds-12 with value :i3.u14.pool__5_5_
Read [bounds] property : PhaseVariation-PT-D10CS100-UpperBounds-13 with value :i4.u70.cell___6_4__B_
Read [bounds] property : PhaseVariation-PT-D10CS100-UpperBounds-14 with value :i2.u93.cell___5_3__B_
Read [bounds] property : PhaseVariation-PT-D10CS100-UpperBounds-15 with value :i2.u69.cell___6_2__B_
built 25 ordering constraints for composite.
built 492 ordering constraints for composite.
built 400 ordering constraints for composite.
built 416 ordering constraints for composite.
built 416 ordering constraints for composite.
built 3136 ordering constraints for composite.
built 336 ordering constraints for composite.
built 368 ordering constraints for composite.
built 348 ordering constraints for composite.
built 296 ordering constraints for composite.
built 408 ordering constraints for composite.

BK_STOP 1527269850636

--------------------
content from stderr:

+ export BINDIR=/home/mcc/BenchKit/
+ BINDIR=/home/mcc/BenchKit/
++ pwd
+ export MODEL=/home/mcc/execution
+ MODEL=/home/mcc/execution
+ /home/mcc/BenchKit//runeclipse.sh /home/mcc/execution UpperBounds -its -ltsminpath /home/mcc/BenchKit//lts_install_dir/ -louvain -smt
+ ulimit -s 65536
+ [[ -z '' ]]
+ export LTSMIN_MEM_SIZE=8589934592
+ LTSMIN_MEM_SIZE=8589934592
+ /home/mcc/BenchKit//itstools/its-tools -consoleLog -data /home/mcc/execution/workspace -pnfolder /home/mcc/execution -examination UpperBounds -z3path /home/mcc/BenchKit//z3/bin/z3 -yices2path /home/mcc/BenchKit//yices/bin/yices -its -ltsminpath /home/mcc/BenchKit//lts_install_dir/ -louvain -smt -vmargs -Dosgi.locking=none -Declipse.stateSaveDelayInterval=-1 -Dosgi.configuration.area=/tmp/.eclipse -Xss8m -Xms40m -Xmx8192m -Dfile.encoding=UTF-8 -Dosgi.requiredJavaVersion=1.6
May 25, 2018 4:50:54 PM fr.lip6.move.gal.application.Application start
INFO: Running its-tools with arguments : [-pnfolder, /home/mcc/execution, -examination, UpperBounds, -z3path, /home/mcc/BenchKit//z3/bin/z3, -yices2path, /home/mcc/BenchKit//yices/bin/yices, -its, -ltsminpath, /home/mcc/BenchKit//lts_install_dir/, -louvain, -smt]
May 25, 2018 4:50:54 PM fr.lip6.move.gal.application.MccTranslator transformPNML
INFO: Parsing pnml file : /home/mcc/execution/model.pnml
May 25, 2018 4:50:54 PM fr.lip6.move.gal.nupn.PTNetReader loadFromXML
INFO: Load time of PNML (sax parser for PT used): 252 ms
May 25, 2018 4:50:54 PM fr.lip6.move.gal.pnml.togal.PTGALTransformer handlePage
INFO: Transformed 302 places.
May 25, 2018 4:50:54 PM fr.lip6.move.gal.pnml.togal.PTGALTransformer handlePage
INFO: Transformed 3137 transitions.
May 25, 2018 4:50:54 PM fr.lip6.move.gal.application.MccTranslator applyOrder
INFO: Applying decomposition
May 25, 2018 4:50:55 PM fr.lip6.move.gal.instantiate.GALRewriter flatten
INFO: Flatten gal took : 795 ms
May 25, 2018 4:50:56 PM fr.lip6.move.gal.instantiate.GALRewriter flatten
INFO: Flatten gal took : 339 ms
Begin: Fri May 25 16:50:56 2018

Computation of communities with the Newman-Girvan Modularity quality function

level 0:
start computation: Fri May 25 16:50:56 2018
network size: 302 nodes, 4338 links, 6272 weight
quality increased from -0.0996318 to 0.152666
end computation: Fri May 25 16:50:56 2018
level 1:
start computation: Fri May 25 16:50:56 2018
network size: 94 nodes, 948 links, 6272 weight
quality increased from 0.152666 to 0.210073
end computation: Fri May 25 16:50:56 2018
level 2:
start computation: Fri May 25 16:50:56 2018
network size: 18 nodes, 124 links, 6272 weight
quality increased from 0.210073 to 0.21532
end computation: Fri May 25 16:50:56 2018
level 3:
start computation: Fri May 25 16:50:56 2018
network size: 10 nodes, 58 links, 6272 weight
quality increased from 0.21532 to 0.21532
end computation: Fri May 25 16:50:56 2018
End: Fri May 25 16:50:56 2018
Total duration: 0 sec
0.21532
May 25, 2018 4:50:56 PM fr.lip6.move.gal.instantiate.CompositeBuilder decomposeWithOrder
INFO: Decomposing Gal with order
May 25, 2018 4:50:57 PM fr.lip6.move.gal.instantiate.GALRewriter flatten
INFO: Flatten gal took : 361 ms
May 25, 2018 4:50:57 PM fr.lip6.move.gal.instantiate.CompositeBuilder rewriteArraysToAllowPartition
INFO: Rewriting arrays to variables to allow decomposition.
May 25, 2018 4:51:02 PM fr.lip6.move.gal.instantiate.Instantiator fuseIsomorphicEffects
INFO: Removed a total of 8175 redundant transitions.
May 25, 2018 4:51:02 PM fr.lip6.move.serialization.SerializationUtil systemToFile
INFO: Time to serialize gal into /home/mcc/execution/UpperBounds.pnml.gal : 56 ms
May 25, 2018 4:51:02 PM fr.lip6.move.serialization.SerializationUtil serializePropertiesForITSTools
INFO: Time to serialize properties into /home/mcc/execution/UpperBounds.prop : 0 ms
ITS-tools command line returned an error code 137

Sequence of Actions to be Executed by the VM

This is useful if one wants to reexecute the tool in the VM from the submitted image disk.

set -x
# this is for BenchKit: configuration of major elements for the test
export BK_INPUT="PhaseVariation-PT-D10CS100"
export BK_EXAMINATION="UpperBounds"
export BK_TOOL="itstoolsl"
export BK_RESULT_DIR="/tmp/BK_RESULTS/OUTPUTS"
export BK_TIME_CONFINEMENT="3600"
export BK_MEMORY_CONFINEMENT="16384"

# this is specific to your benchmark or test

export BIN_DIR="$HOME/BenchKit/bin"

# remove the execution directoty if it exists (to avoid increse of .vmdk images)
if [ -d execution ] ; then
rm -rf execution
fi

tar xzf /home/mcc/BenchKit/INPUTS/PhaseVariation-PT-D10CS100.tgz
mv PhaseVariation-PT-D10CS100 execution
cd execution
pwd
ls -lh

# this is for BenchKit: explicit launching of the test
echo "====================================================================="
echo " Generated by BenchKit 2-3637"
echo " Executing tool itstoolsl"
echo " Input is PhaseVariation-PT-D10CS100, examination is UpperBounds"
echo " Time confinement is $BK_TIME_CONFINEMENT seconds"
echo " Memory confinement is 16384 MBytes"
echo " Number of cores is 4"
echo " Run identifier is r117-csrt-152666477200632"
echo "====================================================================="
echo
echo "--------------------"
echo "content from stdout:"
echo
echo "=== Data for post analysis generated by BenchKit (invocation template)"
echo
if [ "UpperBounds" = "UpperBounds" ] ; then
echo "The expected result is a vector of positive values"
echo NUM_VECTOR
elif [ "UpperBounds" != "StateSpace" ] ; then
echo "The expected result is a vector of booleans"
echo BOOL_VECTOR
else
echo "no data necessary for post analysis"
fi
echo
if [ -f "UpperBounds.txt" ] ; then
echo "here is the order used to build the result vector(from text file)"
for x in $(grep Property UpperBounds.txt | cut -d ' ' -f 2 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ -f "UpperBounds.xml" ] ; then # for cunf (txt files deleted;-)
echo echo "here is the order used to build the result vector(from xml file)"
for x in $(grep '' UpperBounds.xml | cut -d '>' -f 2 | cut -d '<' -f 1 | sort -u) ; do
echo "FORMULA_NAME $x"
done
fi
echo
echo "=== Now, execution of the tool begins"
echo
echo -n "BK_START "
date -u +%s%3N
echo
timeout -s 9 $BK_TIME_CONFINEMENT bash -c "/home/mcc/BenchKit/BenchKit_head.sh 2> STDERR ; echo ; echo -n \"BK_STOP \" ; date -u +%s%3N"
if [ $? -eq 137 ] ; then
echo
echo "BK_TIME_CONFINEMENT_REACHED"
fi
echo
echo "--------------------"
echo "content from stderr:"
echo
cat STDERR ;