Execution Chart

We display below the execution chart for this examination (boot time has been removed).

Trace from the execution

Waiting for the VM to be ready (probing ssh)
.....................................................................
/home/mcc/execution
total 868K
-rw-r--r-- 1 mcc users 5.0K May 15 18:54 CTLCardinality.txt
-rw-r--r-- 1 mcc users 25K May 15 18:54 CTLCardinality.xml
-rw-r--r-- 1 mcc users 24K May 15 18:54 CTLFireability.txt
-rw-r--r-- 1 mcc users 90K May 15 18:54 CTLFireability.xml
-rw-r--r-- 1 mcc users 4.0K May 15 18:50 GenericPropertiesDefinition.xml
-rw-r--r-- 1 mcc users 6.0K May 15 18:50 GenericPropertiesVerdict.xml
-rw-r--r-- 1 mcc users 3.0K May 15 18:54 LTLCardinality.txt
-rw-r--r-- 1 mcc users 12K May 15 18:54 LTLCardinality.xml
-rw-r--r-- 1 mcc users 12K May 15 18:54 LTLFireability.txt
-rw-r--r-- 1 mcc users 41K May 15 18:54 LTLFireability.xml
-rw-r--r-- 1 mcc users 6.6K May 15 18:54 ReachabilityCardinality.txt
-rw-r--r-- 1 mcc users 33K May 15 18:54 ReachabilityCardinality.xml
-rw-r--r-- 1 mcc users 114 May 15 18:54 ReachabilityDeadlock.txt
-rw-r--r-- 1 mcc users 352 May 15 18:54 ReachabilityDeadlock.xml
-rw-r--r-- 1 mcc users 15K May 15 18:54 ReachabilityFireability.txt
-rw-r--r-- 1 mcc users 55K May 15 18:54 ReachabilityFireability.xml
-rw-r--r-- 1 mcc users 2.1K May 15 18:54 UpperBounds.txt
-rw-r--r-- 1 mcc users 4.7K May 15 18:54 UpperBounds.xml
-rw-r--r-- 1 mcc users 5 May 15 18:50 equiv_col
-rw-r--r-- 1 mcc users 3 May 15 18:50 instance
-rw-r--r-- 1 mcc users 6 May 15 18:50 iscolored
-rw-r--r-- 1 mcc users 481K May 15 18:50 model.pnml
=====================================================================
Generated by BenchKit 2-3637
Executing tool itstoolsl
Input is PermAdmissibility-PT-20, examination is StateSpace
Time confinement is 3600 seconds
Memory confinement is 16384 MBytes
Number of cores is 4
Run identifier is r117-csrt-152666477000498
=====================================================================

--------------------
content from stdout:

=== Data for post analysis generated by BenchKit (invocation template)

no data necessary for post analysis


=== Now, execution of the tool begins

BK_START 1527259790840

Converted graph to binary with : CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.louvain.binaries_1.0.0.201805241334/bin/convert-linux64, -i, /tmp/graph5027234831469835538.txt, -o, /tmp/graph5027234831469835538.bin, -w, /tmp/graph5027234831469835538.weights], workingDir=null]
Built communities with : CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.louvain.binaries_1.0.0.201805241334/bin/louvain-linux64, /tmp/graph5027234831469835538.bin, -l, -1, -v, -w, /tmp/graph5027234831469835538.weights, -q, 0, -e, 0.001], workingDir=null]
Invoking ITS tools like this :CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.201805241334/bin/its-reach-linux64, --gc-threshold, 2000000, --quiet, -i, /home/mcc/execution/StateSpace.pnml.gal, -t, CGAL, --stats], workingDir=/home/mcc/execution]

its-reach command run as :

/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.201805241334/bin/its-reach-linux64 --gc-threshold 2000000 --quiet -i /home/mcc/execution/StateSpace.pnml.gal -t CGAL --stats
built 67 ordering constraints for composite.
built 70 ordering constraints for composite.
built 70 ordering constraints for composite.
built 70 ordering constraints for composite.
built 351 ordering constraints for composite.
built 70 ordering constraints for composite.
built 373 ordering constraints for composite.
built 295 ordering constraints for composite.

BK_STOP 1527260918831

--------------------
content from stderr:

+ export BINDIR=/home/mcc/BenchKit/
+ BINDIR=/home/mcc/BenchKit/
++ pwd
+ export MODEL=/home/mcc/execution
+ MODEL=/home/mcc/execution
+ /home/mcc/BenchKit//runeclipse.sh /home/mcc/execution StateSpace -its -ltsminpath /home/mcc/BenchKit//lts_install_dir/ -louvain -smt
+ ulimit -s 65536
+ [[ -z '' ]]
+ export LTSMIN_MEM_SIZE=8589934592
+ LTSMIN_MEM_SIZE=8589934592
+ /home/mcc/BenchKit//itstools/its-tools -consoleLog -data /home/mcc/execution/workspace -pnfolder /home/mcc/execution -examination StateSpace -z3path /home/mcc/BenchKit//z3/bin/z3 -yices2path /home/mcc/BenchKit//yices/bin/yices -its -ltsminpath /home/mcc/BenchKit//lts_install_dir/ -louvain -smt -vmargs -Dosgi.locking=none -Declipse.stateSaveDelayInterval=-1 -Dosgi.configuration.area=/tmp/.eclipse -Xss8m -Xms40m -Xmx8192m -Dfile.encoding=UTF-8 -Dosgi.requiredJavaVersion=1.6
May 25, 2018 2:49:52 PM fr.lip6.move.gal.application.Application start
INFO: Running its-tools with arguments : [-pnfolder, /home/mcc/execution, -examination, StateSpace, -z3path, /home/mcc/BenchKit//z3/bin/z3, -yices2path, /home/mcc/BenchKit//yices/bin/yices, -its, -ltsminpath, /home/mcc/BenchKit//lts_install_dir/, -louvain, -smt]
May 25, 2018 2:49:52 PM fr.lip6.move.gal.application.MccTranslator transformPNML
INFO: Parsing pnml file : /home/mcc/execution/model.pnml
May 25, 2018 2:49:52 PM fr.lip6.move.gal.nupn.PTNetReader loadFromXML
INFO: Load time of PNML (sax parser for PT used): 120 ms
May 25, 2018 2:49:52 PM fr.lip6.move.gal.pnml.togal.PTGALTransformer handlePage
INFO: Transformed 168 places.
May 25, 2018 2:49:53 PM fr.lip6.move.gal.pnml.togal.PTGALTransformer handlePage
INFO: Transformed 592 transitions.
May 25, 2018 2:49:53 PM fr.lip6.move.serialization.SerializationUtil systemToFile
INFO: Time to serialize gal into /home/mcc/execution/model.pnml.img.gal : 39 ms
May 25, 2018 2:49:53 PM fr.lip6.move.gal.application.MccTranslator applyOrder
INFO: Applying decomposition
May 25, 2018 2:49:53 PM fr.lip6.move.gal.instantiate.GALRewriter flatten
INFO: Flatten gal took : 276 ms
May 25, 2018 2:49:53 PM fr.lip6.move.gal.instantiate.GALRewriter flatten
INFO: Flatten gal took : 151 ms
Begin: Fri May 25 14:49:54 2018

Computation of communities with the Newman-Girvan Modularity quality function

level 0:
start computation: Fri May 25 14:49:54 2018
network size: 168 nodes, 3230 links, 1184 weight
quality increased from -0.0143131 to 0.240106
end computation: Fri May 25 14:49:54 2018
level 1:
start computation: Fri May 25 14:49:54 2018
network size: 29 nodes, 679 links, 1184 weight
quality increased from 0.240106 to 0.297459
end computation: Fri May 25 14:49:54 2018
level 2:
start computation: Fri May 25 14:49:54 2018
network size: 8 nodes, 64 links, 1184 weight
quality increased from 0.297459 to 0.297459
end computation: Fri May 25 14:49:54 2018
End: Fri May 25 14:49:54 2018
Total duration: 0 sec
0.297459
May 25, 2018 2:49:54 PM fr.lip6.move.gal.instantiate.CompositeBuilder decomposeWithOrder
INFO: Decomposing Gal with order
May 25, 2018 2:49:54 PM fr.lip6.move.gal.instantiate.GALRewriter flatten
INFO: Flatten gal took : 102 ms
May 25, 2018 2:49:54 PM fr.lip6.move.gal.instantiate.CompositeBuilder rewriteArraysToAllowPartition
INFO: Rewriting arrays to variables to allow decomposition.
May 25, 2018 2:49:54 PM fr.lip6.move.gal.instantiate.Instantiator fuseIsomorphicEffects
INFO: Removed a total of 1677 redundant transitions.
May 25, 2018 2:49:54 PM fr.lip6.move.serialization.SerializationUtil systemToFile
INFO: Time to serialize gal into /home/mcc/execution/StateSpace.pnml.gal : 22 ms
ITS-tools command line returned an error code 137

Sequence of Actions to be Executed by the VM

This is useful if one wants to reexecute the tool in the VM from the submitted image disk.

set -x
# this is for BenchKit: configuration of major elements for the test
export BK_INPUT="PermAdmissibility-PT-20"
export BK_EXAMINATION="StateSpace"
export BK_TOOL="itstoolsl"
export BK_RESULT_DIR="/tmp/BK_RESULTS/OUTPUTS"
export BK_TIME_CONFINEMENT="3600"
export BK_MEMORY_CONFINEMENT="16384"

# this is specific to your benchmark or test

export BIN_DIR="$HOME/BenchKit/bin"

# remove the execution directoty if it exists (to avoid increse of .vmdk images)
if [ -d execution ] ; then
rm -rf execution
fi

tar xzf /home/mcc/BenchKit/INPUTS/PermAdmissibility-PT-20.tgz
mv PermAdmissibility-PT-20 execution
cd execution
pwd
ls -lh

# this is for BenchKit: explicit launching of the test
echo "====================================================================="
echo " Generated by BenchKit 2-3637"
echo " Executing tool itstoolsl"
echo " Input is PermAdmissibility-PT-20, examination is StateSpace"
echo " Time confinement is $BK_TIME_CONFINEMENT seconds"
echo " Memory confinement is 16384 MBytes"
echo " Number of cores is 4"
echo " Run identifier is r117-csrt-152666477000498"
echo "====================================================================="
echo
echo "--------------------"
echo "content from stdout:"
echo
echo "=== Data for post analysis generated by BenchKit (invocation template)"
echo
if [ "StateSpace" = "UpperBounds" ] ; then
echo "The expected result is a vector of positive values"
echo NUM_VECTOR
elif [ "StateSpace" != "StateSpace" ] ; then
echo "The expected result is a vector of booleans"
echo BOOL_VECTOR
else
echo "no data necessary for post analysis"
fi
echo
if [ -f "StateSpace.txt" ] ; then
echo "here is the order used to build the result vector(from text file)"
for x in $(grep Property StateSpace.txt | cut -d ' ' -f 2 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ -f "StateSpace.xml" ] ; then # for cunf (txt files deleted;-)
echo echo "here is the order used to build the result vector(from xml file)"
for x in $(grep '' StateSpace.xml | cut -d '>' -f 2 | cut -d '<' -f 1 | sort -u) ; do
echo "FORMULA_NAME $x"
done
fi
echo
echo "=== Now, execution of the tool begins"
echo
echo -n "BK_START "
date -u +%s%3N
echo
timeout -s 9 $BK_TIME_CONFINEMENT bash -c "/home/mcc/BenchKit/BenchKit_head.sh 2> STDERR ; echo ; echo -n \"BK_STOP \" ; date -u +%s%3N"
if [ $? -eq 137 ] ; then
echo
echo "BK_TIME_CONFINEMENT_REACHED"
fi
echo
echo "--------------------"
echo "content from stderr:"
echo
cat STDERR ;