Execution Chart

We display below the execution chart for this examination (boot time has been removed).

Trace from the execution

Waiting for the VM to be ready (probing ssh)
....................
/home/mcc/execution
total 312K
-rw-r--r-- 1 mcc users 4.3K May 15 18:54 CTLCardinality.txt
-rw-r--r-- 1 mcc users 16K May 15 18:54 CTLCardinality.xml
-rw-r--r-- 1 mcc users 4.5K May 15 18:54 CTLFireability.txt
-rw-r--r-- 1 mcc users 18K May 15 18:54 CTLFireability.xml
-rw-r--r-- 1 mcc users 4.0K May 15 18:50 GenericPropertiesDefinition.xml
-rw-r--r-- 1 mcc users 6.0K May 15 18:50 GenericPropertiesVerdict.xml
-rw-r--r-- 1 mcc users 3.6K May 15 18:54 LTLCardinality.txt
-rw-r--r-- 1 mcc users 13K May 15 18:54 LTLCardinality.xml
-rw-r--r-- 1 mcc users 2.8K May 15 18:54 LTLFireability.txt
-rw-r--r-- 1 mcc users 11K May 15 18:54 LTLFireability.xml
-rw-r--r-- 1 mcc users 4.4K May 15 18:54 ReachabilityCardinality.txt
-rw-r--r-- 1 mcc users 15K May 15 18:54 ReachabilityCardinality.xml
-rw-r--r-- 1 mcc users 113 May 15 18:54 ReachabilityDeadlock.txt
-rw-r--r-- 1 mcc users 351 May 15 18:54 ReachabilityDeadlock.xml
-rw-r--r-- 1 mcc users 5.2K May 15 18:54 ReachabilityFireability.txt
-rw-r--r-- 1 mcc users 19K May 15 18:54 ReachabilityFireability.xml
-rw-r--r-- 1 mcc users 2.2K May 15 18:54 UpperBounds.txt
-rw-r--r-- 1 mcc users 4.2K May 15 18:54 UpperBounds.xml
-rw-r--r-- 1 mcc users 6 May 15 18:50 equiv_col
-rw-r--r-- 1 mcc users 5 May 15 18:50 instance
-rw-r--r-- 1 mcc users 6 May 15 18:50 iscolored
-rw-r--r-- 1 mcc users 127K May 15 18:50 model.pnml
=====================================================================
Generated by BenchKit 2-3637
Executing tool itstoolsl
Input is IBMB2S565S3960-PT-none, examination is ReachabilityDeadlock
Time confinement is 3600 seconds
Memory confinement is 16384 MBytes
Number of cores is 4
Run identifier is r105-smll-152658635400195
=====================================================================

--------------------
content from stdout:

=== Data for post analysis generated by BenchKit (invocation template)

The expected result is a vector of booleans
BOOL_VECTOR

here is the order used to build the result vector(from text file)
FORMULA_NAME IBMB2S565S3960-PT-none-ReachabilityDeadlock-0

=== Now, execution of the tool begins

BK_START 1527402155729

Flatten gal took : 169 ms
Constant places removed 102 places and 1 transitions.
Reduce isomorphic transitions removed 1 transitions.
Performed 119 Post agglomeration using F-continuation condition.
Iterating post reduction 0 with 222 rules applied. Total rules applied 222 place count 171 transition count 58
Constant places removed 130 places and 9 transitions.
Reduce isomorphic transitions removed 2 transitions.
Implicit places reduction removed 1 places :[join.s00001163.activated.s00001064]
Performed 3 Post agglomeration using F-continuation condition.
Iterating post reduction 1 with 136 rules applied. Total rules applied 358 place count 40 transition count 44
Constant places removed 5 places and 0 transitions.
Iterating post reduction 2 with 5 rules applied. Total rules applied 363 place count 35 transition count 44
Constant places removed 2 places and 2 transitions.
Iterating post reduction 3 with 2 rules applied. Total rules applied 365 place count 33 transition count 42
Constant places removed 1 places and 0 transitions.
Iterating post reduction 4 with 1 rules applied. Total rules applied 366 place count 32 transition count 42
Constant places removed 1 places and 1 transitions.
Iterating post reduction 5 with 1 rules applied. Total rules applied 367 place count 31 transition count 41
Constant places removed 1 places and 1 transitions.
Iterating post reduction 6 with 1 rules applied. Total rules applied 368 place count 30 transition count 40
Performed 6 Pre agglomeration using Quasi-Persistent + HF-interchangeable + Divergent Free condition.
Pre-agglomeration after 7 with 6 Pre rules applied. Total rules applied 368 place count 30 transition count 34
Constant places removed 6 places and 0 transitions.
Iterating post reduction 7 with 6 rules applied. Total rules applied 374 place count 24 transition count 34
Performed 9 Post agglomeration using F-continuation condition.
Constant places removed 9 places and 0 transitions.
Reduce isomorphic transitions removed 2 transitions.
Iterating post reduction 8 with 11 rules applied. Total rules applied 385 place count 15 transition count 21
Performed 1 Post agglomeration using F-continuation condition.
Constant places removed 1 places and 0 transitions.
Reduce isomorphic transitions removed 1 transitions.
Iterating post reduction 9 with 2 rules applied. Total rules applied 387 place count 14 transition count 19
Performed 2 Post agglomeration using F-continuation condition.
Constant places removed 2 places and 0 transitions.
Reduce isomorphic transitions removed 1 transitions.
Iterating post reduction 10 with 3 rules applied. Total rules applied 390 place count 12 transition count 19
Applied a total of 390 rules in 57 ms. Remains 12 /273 variables (removed 261) and now considering 19/179 (removed 160) transitions.
// Phase 1: matrix 19 rows 12 cols
Using solver Z3 to compute partial order matrices.
Built C files in :
/home/mcc/execution
Converted graph to binary with : CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.louvain.binaries_1.0.0.201805241334/bin/convert-linux64, -i, /tmp/graph8967441707251785490.txt, -o, /tmp/graph8967441707251785490.bin, -w, /tmp/graph8967441707251785490.weights], workingDir=null]
Built communities with : CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.louvain.binaries_1.0.0.201805241334/bin/louvain-linux64, /tmp/graph8967441707251785490.bin, -l, -1, -v, -w, /tmp/graph8967441707251785490.weights, -q, 0, -e, 0.001], workingDir=null]
Presburger conditions satisfied. Using coverability to approximate state space in K-Induction.
// Phase 1: matrix 19 rows 12 cols
Invoking ITS tools like this :CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.201805241334/bin/its-ctl-linux64, --gc-threshold, 2000000, --quiet, -i, /home/mcc/execution/ReachabilityDeadlock.pnml.gal, -t, CGAL, -ctl, DEADLOCK], workingDir=/home/mcc/execution]

its-ctl command run as :

/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.201805241334/bin/its-ctl-linux64 --gc-threshold 2000000 --quiet -i /home/mcc/execution/ReachabilityDeadlock.pnml.gal -t CGAL -ctl DEADLOCK
No direction supplied, using forward translation only.
built 1 ordering constraints for composite.
Model ,|S| ,Time ,Mem(kb) ,fin. SDD ,fin. DDD ,peak SDD ,peak DDD ,SDD Hom ,SDD cache peak ,DDD Hom ,DDD cachepeak ,SHom cache
reachable,171972,0.327105,11300,170,388,3841,19311,25,15667,44,68842,0


Model ,|S| ,Time ,Mem(kb) ,fin. SDD ,fin. DDD ,peak SDD ,peak DDD ,SDD Hom ,SDD cache peak ,DDD Hom ,DDD cachepeak ,SHom cache
dead,3746,0.558658,13792,86,302,3841,19311,45,33659,216,108284,571

System contains 3746 deadlocks (shown below if less than --print-limit option) !
FORMULA IBMB2S565S3960-PT-none-ReachabilityDeadlock-0 TRUE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL USE_NUPN
[ 3746 states ] showing 10 first states
[ u1={[ merge.s00002241.activated=1 join.s00002243.activated.s00001065=2 ]
[ merge.s00002241.activated=1 join.s00002243.activated.s00001065=2 join.s00002243.activated.s00001064=1 ]
[ merge.s00002241.activated=1 join.s00002243.activated.s00001065=2 join.s00002243.activated.s00001064=2 ]
[ merge.s00002241.activated=1 join.s00002243.activated.s00001065=3 ]
[ merge.s00002241.activated=1 join.s00002243.activated.s00001065=3 join.s00002243.activated.s00001064=1 ]
[ merge.s00002241.activated=1 join.s00002243.activated.s00001065=3 join.s00002243.activated.s00001064=2 ]
[ merge.s00002241.activated=1 join.s00002243.activated.s00001065=3 join.s00002243.activated.s00001064=3 ]
[ merge.s00002241.activated=2 join.s00002243.activated.s00001065=1 join.s00002243.activated.s00001064=2 ]
[ merge.s00002241.activated=2 join.s00002243.activated.s00001065=2 join.s00002243.activated.s00001064=3 ]
[ merge.s00002241.activated=3 join.s00002243.activated.s00001064=2 ]
} u0={[ ]
[ callToProcess.s00003876.input.s00001066=1 ]
[ callToProcess.s00003957.input.s00001066=1 ]
[ callToProcess.s00003957.input.s00001066=1 callToProcess.s00003876.input.s00001066=1 ]
[ callToProcess.s00003957.input.s00001066=1 callToProcess.s00003876.input.s00001066=2 ]
[ callToProcess.s00003957.input.s00001066=2 ]
[ callToProcess.s00003957.input.s00001066=2 callToProcess.s00003876.input.s00001066=1 ]
[ callToProcess.s00003957.input.s00001066=2 callToProcess.s00003876.input.s00001066=2 ]
[ callToProcess.s00003957.input.s00001066=3 ]
[ callToProcess.s00003957.input.s00001066=3 callToProcess.s00003876.input.s00001066=1 ]
} ]
Running compilation step : CommandLine [args=[gcc, -c, -I/home/mcc/BenchKit//lts_install_dir//include, -I., -std=c99, -fPIC, -O3, model.c], workingDir=/home/mcc/execution]
WARNING : LTS min runner thread was asked to interrupt. Dying gracefully.

BK_STOP 1527402161490

--------------------
content from stderr:

+ export BINDIR=/home/mcc/BenchKit/
+ BINDIR=/home/mcc/BenchKit/
++ pwd
+ export MODEL=/home/mcc/execution
+ MODEL=/home/mcc/execution
+ /home/mcc/BenchKit//runeclipse.sh /home/mcc/execution ReachabilityDeadlock -its -ltsminpath /home/mcc/BenchKit//lts_install_dir/ -louvain -smt
+ ulimit -s 65536
+ [[ -z '' ]]
+ export LTSMIN_MEM_SIZE=8589934592
+ LTSMIN_MEM_SIZE=8589934592
+ /home/mcc/BenchKit//itstools/its-tools -consoleLog -data /home/mcc/execution/workspace -pnfolder /home/mcc/execution -examination ReachabilityDeadlock -z3path /home/mcc/BenchKit//z3/bin/z3 -yices2path /home/mcc/BenchKit//yices/bin/yices -its -ltsminpath /home/mcc/BenchKit//lts_install_dir/ -louvain -smt -vmargs -Dosgi.locking=none -Declipse.stateSaveDelayInterval=-1 -Dosgi.configuration.area=/tmp/.eclipse -Xss8m -Xms40m -Xmx8192m -Dfile.encoding=UTF-8 -Dosgi.requiredJavaVersion=1.6
May 27, 2018 6:22:38 AM fr.lip6.move.gal.application.Application start
INFO: Running its-tools with arguments : [-pnfolder, /home/mcc/execution, -examination, ReachabilityDeadlock, -z3path, /home/mcc/BenchKit//z3/bin/z3, -yices2path, /home/mcc/BenchKit//yices/bin/yices, -its, -ltsminpath, /home/mcc/BenchKit//lts_install_dir/, -louvain, -smt]
May 27, 2018 6:22:38 AM fr.lip6.move.gal.application.MccTranslator transformPNML
INFO: Parsing pnml file : /home/mcc/execution/model.pnml
May 27, 2018 6:22:38 AM fr.lip6.move.gal.nupn.PTNetReader loadFromXML
INFO: Load time of PNML (sax parser for PT used): 116 ms
May 27, 2018 6:22:38 AM fr.lip6.move.gal.pnml.togal.PTGALTransformer handlePage
INFO: Transformed 273 places.
May 27, 2018 6:22:39 AM fr.lip6.move.gal.pnml.togal.PTGALTransformer handlePage
INFO: Transformed 179 transitions.
May 27, 2018 6:22:39 AM fr.lip6.move.serialization.SerializationUtil systemToFile
INFO: Time to serialize gal into /home/mcc/execution/model.pnml.img.gal : 29 ms
May 27, 2018 6:22:39 AM fr.lip6.move.gal.instantiate.GALRewriter flatten
INFO: Flatten gal took : 162 ms
May 27, 2018 6:22:39 AM fr.lip6.move.serialization.SerializationUtil systemToFile
INFO: Time to serialize gal into /home/mcc/execution/model.pnml.simple.gal : 12 ms
May 27, 2018 6:22:39 AM fr.lip6.move.gal.semantics.DeterministicNextBuilder getDeterministicNext
INFO: Input system was already deterministic with 179 transitions.
May 27, 2018 6:22:39 AM fr.lip6.move.gal.application.MccTranslator applyOrder
INFO: Applying decomposition
May 27, 2018 6:22:39 AM fr.lip6.move.gal.instantiate.GALRewriter flatten
INFO: Flatten gal took : 8 ms
May 27, 2018 6:22:39 AM fr.lip6.move.gal.instantiate.GALRewriter flatten
INFO: Flatten gal took : 24 ms
May 27, 2018 6:22:39 AM fr.lip6.move.gal.semantics.DeterministicNextBuilder getDeterministicNext
INFO: Input system was already deterministic with 19 transitions.
Begin: Sun May 27 06:22:39 2018

Computation of communities with the Newman-Girvan Modularity quality function

level 0:
start computation: Sun May 27 06:22:39 2018
network size: 12 nodes, 34 links, 28 weight
quality increased from -0.131803 to 0.433036
end computation: Sun May 27 06:22:39 2018
level 1:
start computation: Sun May 27 06:22:39 2018
network size: 2 nodes, 4 links, 28 weight
quality increased from 0.433036 to 0.433036
end computation: Sun May 27 06:22:39 2018
End: Sun May 27 06:22:39 2018
Total duration: 0 sec
0.433036
May 27, 2018 6:22:39 AM fr.lip6.move.gal.gal2smt.bmc.KInductionSolver computeAndDeclareInvariants
INFO: Computed 0 place invariants in 2 ms
May 27, 2018 6:22:39 AM fr.lip6.move.gal.instantiate.CompositeBuilder decomposeWithOrder
INFO: Decomposing Gal with order
May 27, 2018 6:22:39 AM fr.lip6.move.gal.instantiate.GALRewriter flatten
INFO: Flatten gal took : 7 ms
May 27, 2018 6:22:39 AM fr.lip6.move.gal.instantiate.CompositeBuilder rewriteArraysToAllowPartition
INFO: Rewriting arrays to variables to allow decomposition.
May 27, 2018 6:22:39 AM fr.lip6.move.serialization.SerializationUtil systemToFile
INFO: Time to serialize gal into /home/mcc/execution/ReachabilityDeadlock.pnml.gal : 3 ms
May 27, 2018 6:22:39 AM fr.lip6.move.gal.gal2smt.bmc.KInductionSolver init
INFO: Proved 12 variables to be positive in 116 ms
May 27, 2018 6:22:39 AM fr.lip6.move.gal.gal2smt.bmc.NecessaryEnablingsolver computeAblingMatrix
INFO: Computing symmetric may disable matrix : 19 transitions.
May 27, 2018 6:22:39 AM fr.lip6.move.gal.gal2smt.bmc.NecessaryEnablingsolver printStats
INFO: Computation of disable matrix completed :0/19 took 0 ms. Total solver calls (SAT/UNSAT): 0(0/0)
May 27, 2018 6:22:39 AM fr.lip6.move.gal.gal2smt.bmc.NecessaryEnablingsolver printStats
INFO: Computation of Complete disable matrix. took 2 ms. Total solver calls (SAT/UNSAT): 0(0/0)
May 27, 2018 6:22:39 AM fr.lip6.move.gal.gal2smt.bmc.NecessaryEnablingsolver computeAblingMatrix
INFO: Computing symmetric may enable matrix : 19 transitions.
May 27, 2018 6:22:39 AM fr.lip6.move.gal.gal2smt.bmc.NecessaryEnablingsolver printStats
INFO: Computation of Complete enable matrix. took 0 ms. Total solver calls (SAT/UNSAT): 0(0/0)
May 27, 2018 6:22:39 AM fr.lip6.move.gal.gal2smt.bmc.NecessaryEnablingsolver computeCoEnablingMatrix
INFO: Computing symmetric co enabling matrix : 19 transitions.
May 27, 2018 6:22:40 AM fr.lip6.move.gal.gal2smt.bmc.NecessaryEnablingsolver printStats
INFO: Computation of Finished co-enabling matrix. took 491 ms. Total solver calls (SAT/UNSAT): 26(26/0)
May 27, 2018 6:22:40 AM fr.lip6.move.gal.gal2smt.bmc.NecessaryEnablingsolver computeDoNotAccord
INFO: Computing Do-Not-Accords matrix : 19 transitions.
May 27, 2018 6:22:40 AM fr.lip6.move.gal.gal2smt.bmc.NextBMCSolver checkSat
WARNING: SMT solver unexpectedly returned 'unknown' answer, retrying.
Skipping mayMatrices nes/nds SMT solver raised an error :unknown
java.lang.RuntimeException: SMT solver raised an error :unknown
at fr.lip6.move.gal.gal2smt.bmc.NextBMCSolver.checkSat(NextBMCSolver.java:318)
at fr.lip6.move.gal.gal2smt.bmc.NextBMCSolver.checkSat(NextBMCSolver.java:305)
at fr.lip6.move.gal.gal2smt.bmc.NecessaryEnablingsolver.computeDoNotAccord(NecessaryEnablingsolver.java:628)
at fr.lip6.move.gal.gal2pins.Gal2PinsTransformerNext.printLabels(Gal2PinsTransformerNext.java:538)
at fr.lip6.move.gal.gal2pins.Gal2PinsTransformerNext.printDependencyMatrix(Gal2PinsTransformerNext.java:209)
at fr.lip6.move.gal.gal2pins.Gal2PinsTransformerNext.buildBodyFile(Gal2PinsTransformerNext.java:85)
at fr.lip6.move.gal.gal2pins.Gal2PinsTransformerNext.transform(Gal2PinsTransformerNext.java:830)
at fr.lip6.move.gal.application.LTSminRunner$1.run(LTSminRunner.java:71)
at java.lang.Thread.run(Thread.java:748)
May 27, 2018 6:22:40 AM fr.lip6.move.gal.gal2pins.Gal2PinsTransformerNext transform
INFO: Built C files in 758ms conformant to PINS in folder :/home/mcc/execution

Sequence of Actions to be Executed by the VM

This is useful if one wants to reexecute the tool in the VM from the submitted image disk.

set -x
# this is for BenchKit: configuration of major elements for the test
export BK_INPUT="IBMB2S565S3960-PT-none"
export BK_EXAMINATION="ReachabilityDeadlock"
export BK_TOOL="itstoolsl"
export BK_RESULT_DIR="/tmp/BK_RESULTS/OUTPUTS"
export BK_TIME_CONFINEMENT="3600"
export BK_MEMORY_CONFINEMENT="16384"

# this is specific to your benchmark or test

export BIN_DIR="$HOME/BenchKit/bin"

# remove the execution directoty if it exists (to avoid increse of .vmdk images)
if [ -d execution ] ; then
rm -rf execution
fi

tar xzf /home/mcc/BenchKit/INPUTS/IBMB2S565S3960-PT-none.tgz
mv IBMB2S565S3960-PT-none execution
cd execution
pwd
ls -lh

# this is for BenchKit: explicit launching of the test
echo "====================================================================="
echo " Generated by BenchKit 2-3637"
echo " Executing tool itstoolsl"
echo " Input is IBMB2S565S3960-PT-none, examination is ReachabilityDeadlock"
echo " Time confinement is $BK_TIME_CONFINEMENT seconds"
echo " Memory confinement is 16384 MBytes"
echo " Number of cores is 4"
echo " Run identifier is r105-smll-152658635400195"
echo "====================================================================="
echo
echo "--------------------"
echo "content from stdout:"
echo
echo "=== Data for post analysis generated by BenchKit (invocation template)"
echo
if [ "ReachabilityDeadlock" = "UpperBounds" ] ; then
echo "The expected result is a vector of positive values"
echo NUM_VECTOR
elif [ "ReachabilityDeadlock" != "StateSpace" ] ; then
echo "The expected result is a vector of booleans"
echo BOOL_VECTOR
else
echo "no data necessary for post analysis"
fi
echo
if [ -f "ReachabilityDeadlock.txt" ] ; then
echo "here is the order used to build the result vector(from text file)"
for x in $(grep Property ReachabilityDeadlock.txt | cut -d ' ' -f 2 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ -f "ReachabilityDeadlock.xml" ] ; then # for cunf (txt files deleted;-)
echo echo "here is the order used to build the result vector(from xml file)"
for x in $(grep '' ReachabilityDeadlock.xml | cut -d '>' -f 2 | cut -d '<' -f 1 | sort -u) ; do
echo "FORMULA_NAME $x"
done
fi
echo
echo "=== Now, execution of the tool begins"
echo
echo -n "BK_START "
date -u +%s%3N
echo
timeout -s 9 $BK_TIME_CONFINEMENT bash -c "/home/mcc/BenchKit/BenchKit_head.sh 2> STDERR ; echo ; echo -n \"BK_STOP \" ; date -u +%s%3N"
if [ $? -eq 137 ] ; then
echo
echo "BK_TIME_CONFINEMENT_REACHED"
fi
echo
echo "--------------------"
echo "content from stderr:"
echo
cat STDERR ;