Execution Chart

We display below the execution chart for this examination (boot time has been removed).

Trace from the execution

Waiting for the VM to be ready (probing ssh)
.................................................................
/home/mcc/execution
total 7.5M
-rw-r--r-- 1 mcc users 4.1K May 15 18:54 CTLCardinality.txt
-rw-r--r-- 1 mcc users 20K May 15 18:54 CTLCardinality.xml
-rw-r--r-- 1 mcc users 3.2K May 15 18:54 CTLFireability.txt
-rw-r--r-- 1 mcc users 18K May 15 18:54 CTLFireability.xml
-rw-r--r-- 1 mcc users 4.0K May 15 18:50 GenericPropertiesDefinition.xml
-rw-r--r-- 1 mcc users 5.8K May 15 18:50 GenericPropertiesVerdict.xml
-rw-r--r-- 1 mcc users 2.8K May 15 18:54 LTLCardinality.txt
-rw-r--r-- 1 mcc users 12K May 15 18:54 LTLCardinality.xml
-rw-r--r-- 1 mcc users 2.1K May 15 18:54 LTLFireability.txt
-rw-r--r-- 1 mcc users 8.9K May 15 18:54 LTLFireability.xml
-rw-r--r-- 1 mcc users 4.4K May 15 18:54 ReachabilityCardinality.txt
-rw-r--r-- 1 mcc users 20K May 15 18:54 ReachabilityCardinality.xml
-rw-r--r-- 1 mcc users 113 May 15 18:54 ReachabilityDeadlock.txt
-rw-r--r-- 1 mcc users 351 May 15 18:54 ReachabilityDeadlock.xml
-rw-r--r-- 1 mcc users 3.2K May 15 18:54 ReachabilityFireability.txt
-rw-r--r-- 1 mcc users 15K May 15 18:54 ReachabilityFireability.xml
-rw-r--r-- 1 mcc users 1.8K May 15 18:54 UpperBounds.txt
-rw-r--r-- 1 mcc users 3.9K May 15 18:54 UpperBounds.xml
-rw-r--r-- 1 mcc users 6 May 15 18:50 equiv_col
-rw-r--r-- 1 mcc users 8 May 15 18:50 instance
-rw-r--r-- 1 mcc users 6 May 15 18:50 iscolored
-rw-r--r-- 1 mcc users 7.3M May 15 18:50 model.pnml
=====================================================================
Generated by BenchKit 2-3637
Executing tool mcc4mcc-full
Input is Diffusion2D-PT-D50N050, examination is UpperBounds
Time confinement is 3600 seconds
Memory confinement is 16384 MBytes
Number of cores is 4
Run identifier is r082-blw3-152649949600296
=====================================================================

--------------------
content from stdout:

=== Data for post analysis generated by BenchKit (invocation template)

The expected result is a vector of positive values
NUM_VECTOR

here is the order used to build the result vector(from text file)
FORMULA_NAME Diffusion2D-PT-D50N050-UpperBounds-00
FORMULA_NAME Diffusion2D-PT-D50N050-UpperBounds-01
FORMULA_NAME Diffusion2D-PT-D50N050-UpperBounds-02
FORMULA_NAME Diffusion2D-PT-D50N050-UpperBounds-03
FORMULA_NAME Diffusion2D-PT-D50N050-UpperBounds-04
FORMULA_NAME Diffusion2D-PT-D50N050-UpperBounds-05
FORMULA_NAME Diffusion2D-PT-D50N050-UpperBounds-06
FORMULA_NAME Diffusion2D-PT-D50N050-UpperBounds-07
FORMULA_NAME Diffusion2D-PT-D50N050-UpperBounds-08
FORMULA_NAME Diffusion2D-PT-D50N050-UpperBounds-09
FORMULA_NAME Diffusion2D-PT-D50N050-UpperBounds-10
FORMULA_NAME Diffusion2D-PT-D50N050-UpperBounds-11
FORMULA_NAME Diffusion2D-PT-D50N050-UpperBounds-12
FORMULA_NAME Diffusion2D-PT-D50N050-UpperBounds-13
FORMULA_NAME Diffusion2D-PT-D50N050-UpperBounds-14
FORMULA_NAME Diffusion2D-PT-D50N050-UpperBounds-15

=== Now, execution of the tool begins

BK_START 1527412344615


BK_STOP 1527412569007

--------------------
content from stderr:

Prefix is 65b80f64.
Reading known information in /usr/share/mcc4mcc/65b80f64-known.json.
Reading learned information in /usr/share/mcc4mcc/65b80f64-learned.json.
Reading value translations in /usr/share/mcc4mcc/65b80f64-values.json.
Using directory /home/mcc/execution for input, as it contains a model.pnml file.
Using Diffusion2D-PT-D50N050 as instance name.
Using Diffusion2D as model name.
Using algorithm or tool decision-tree.
Model characteristics are: {'Examination': 'UpperBounds', 'Place/Transition': True, 'Colored': False, 'Relative-Time': 1, 'Relative-Memory': 1, 'Ordinary': True, 'Simple Free Choice': True, 'Extended Free Choice': True, 'State Machine': True, 'Marked Graph': False, 'Connected': True, 'Strongly Connected': True, 'Source Place': False, 'Sink Place': False, 'Source Transition': False, 'Sink Transition': False, 'Loop Free': True, 'Conservative': True, 'Sub-Conservative': True, 'Nested Units': False, 'Safe': False, 'Deadlock': False, 'Reversible': True, 'Quasi Live': True, 'Live': True}.
Known tools are: [{'Time': 1611650, 'Memory': 5629.08, 'Tool': 'itstools'}, {'Time': 1860802, 'Memory': 5630.46, 'Tool': 'itstools'}, {'Time': 3539581, 'Memory': 535.16, 'Tool': 'lola'}, {'Time': 3540103, 'Memory': 535.4, 'Tool': 'lola'}].
Learned tools are: [{'Tool': 'lola'}].
Learned tool lola is 2.1962467036887663x far from the best tool itstools.
UpperBounds lola Diffusion2D-PT-D50N050...

Time: 3600 - MCC
----- Start make prepare stdout -----
----- Start make prepare stderr -----
===========================================================================================
Diffusion2D-PT-D50N050: translating PT Petri net model.pnml into LoLA format
===========================================================================================
translating PT Petri net complete


checking for too many tokens
===========================================================================================
Diffusion2D-PT-D50N050: translating PT formula UpperBounds into LoLA format
===========================================================================================
translating formula complete
touch formulae;
----- Start make result stderr -----
----- Start make result stdout -----
UpperBounds @ Diffusion2D-PT-D50N050 @ 3539 seconds
Makefile:222: recipe for target 'verify' failed
make: [verify] Error 134 (ignored)
----- Start make result stdout -----
----- Start make result stderr -----
lola: LoLA will run for 3539 seconds at most (--timelimit)
lola: NET
lola: reading net from model.pnml.lola
lola: finished parsing
lola: closed net file model.pnml.lola
lola: 21904/65536 symbol table entries, 8280 collisions
lola: preprocessing...
lola: finding significant places
lola: 2500 places, 19404 transitions, 2499 significant places
lola: computing forward-conflicting sets
lola: computing back-conflicting sets
lola: 2500 transition conflict sets
lola: TASK
lola: reading formula from Diffusion2D-PT-D50N050-UpperBounds.task
lola: MAX(cAMP__41_49_) : MAX(cAMP__28_2_) : MAX(cAMP__40_6_) : MAX(cAMP__5_3_) : MAX(cAMP__19_45_) : MAX(cAMP__50_42_) : MAX(cAMP__15_25_) : MAX(cAMP__24_14_) : MAX(cAMP__40_44_) : MAX(cAMP__20_4_) : MAX(cAMP__46_18_) : MAX(cAMP__18_34_) : MAX(cAMP__12_31_) : MAX(cAMP__16_11_) : MAX(cAMP__6_3_) : MAX(cAMP__40_12_)
lola: computing a collection of formulas
lola: RUNNING
lola: subprocess 0 will run for 221 seconds at most (--localtimelimit=-1)
lola: ========================================
lola: ...considering subproblem: MAX(cAMP__41_49_)
lola: ========================================
lola: SUBTASK
lola: computing bound of an expression
lola: STORE
lola: using a bit-perfect encoder (--encoder=bit)
lola: using 9996 bytes per marking, with 0 unused bits
lola: using a prefix tree store (--store=prefix)
lola: SEARCH
lola: using bound preserving stubborn set method with insertion algorithm(--stubborn=tarjan)
lola: RUNNING
lola: 5626 markings, 20406 edges, 1125 markings/sec, 0 secs
lola: 11294 markings, 39542 edges, 1134 markings/sec, 5 secs
lola: 17144 markings, 59072 edges, 1170 markings/sec, 10 secs
lola: 22997 markings, 78768 edges, 1171 markings/sec, 15 secs
lola: 28846 markings, 98789 edges, 1170 markings/sec, 20 secs
lola: 34682 markings, 118388 edges, 1167 markings/sec, 25 secs
lola: 40357 markings, 137193 edges, 1135 markings/sec, 30 secs
lola: 46169 markings, 156754 edges, 1162 markings/sec, 35 secs
lola: 52011 markings, 176592 edges, 1168 markings/sec, 40 secs
lola: 57848 markings, 195913 edges, 1167 markings/sec, 45 secs
lola: 63670 markings, 215492 edges, 1164 markings/sec, 50 secs
lola: 69475 markings, 235222 edges, 1161 markings/sec, 55 secs
lola: 75275 markings, 254424 edges, 1160 markings/sec, 60 secs
lola: 80989 markings, 273686 edges, 1143 markings/sec, 65 secs
lola: 86627 markings, 293870 edges, 1128 markings/sec, 70 secs
lola: 92215 markings, 313555 edges, 1118 markings/sec, 75 secs
lola: 98067 markings, 333975 edges, 1170 markings/sec, 80 secs
lola: 103932 markings, 353803 edges, 1173 markings/sec, 85 secs
lola: 109518 markings, 372847 edges, 1117 markings/sec, 90 secs
lola: 114720 markings, 390537 edges, 1040 markings/sec, 95 secs
lola: 119969 markings, 408560 edges, 1050 markings/sec, 100 secs
lola: 125665 markings, 427672 edges, 1139 markings/sec, 105 secs
lola: 131349 markings, 446506 edges, 1137 markings/sec, 110 secs
lola: 137083 markings, 467062 edges, 1147 markings/sec, 115 secs
lola: 143022 markings, 488178 edges, 1188 markings/sec, 120 secs
lola: 148880 markings, 508241 edges, 1172 markings/sec, 125 secs
lola: 154670 markings, 528922 edges, 1158 markings/sec, 130 secs
lola: 160509 markings, 548773 edges, 1168 markings/sec, 135 secs
lola: 166341 markings, 568628 edges, 1166 markings/sec, 140 secs
lola: 172157 markings, 588429 edges, 1163 markings/sec, 145 secs
lola: 177978 markings, 609262 edges, 1164 markings/sec, 150 secs
lola: 183764 markings, 629805 edges, 1157 markings/sec, 155 secs
lola: 189562 markings, 650722 edges, 1160 markings/sec, 160 secs
lola: 195384 markings, 670419 edges, 1164 markings/sec, 165 secs
lola: 201202 markings, 689764 edges, 1164 markings/sec, 170 secs
lola: 207044 markings, 709323 edges, 1168 markings/sec, 175 secs
lola: 212896 markings, 729118 edges, 1170 markings/sec, 180 secs
lola: 218716 markings, 749240 edges, 1164 markings/sec, 185 secs
lola: 224519 markings, 770332 edges, 1161 markings/sec, 190 secs
lola: 230332 markings, 790446 edges, 1163 markings/sec, 195 secs
lola: 236170 markings, 810008 edges, 1168 markings/sec, 200 secs
lola: 241978 markings, 830456 edges, 1162 markings/sec, 205 secs
lola: 247818 markings, 850576 edges, 1168 markings/sec, 210 secs
lola: 253631 markings, 870130 edges, 1163 markings/sec, 215 secs
lola: local time limit reached - aborting
lola: Child process aborted or communication problem between parent and child process
terminate called after throwing an instance of 'std::runtime_error'
what(): parse error at position 0: unexpected character, last read: '
'
Aborted (core dumped)
FORMULA Diffusion2D-PT-D50N050-UpperBounds-0 CANNOT_COMPUTE TECHNIQUES SEQUENTIAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS USE_NUPN
FORMULA Diffusion2D-PT-D50N050-UpperBounds-1 CANNOT_COMPUTE TECHNIQUES SEQUENTIAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS USE_NUPN
FORMULA Diffusion2D-PT-D50N050-UpperBounds-2 CANNOT_COMPUTE TECHNIQUES SEQUENTIAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS USE_NUPN
FORMULA Diffusion2D-PT-D50N050-UpperBounds-3 CANNOT_COMPUTE TECHNIQUES SEQUENTIAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS USE_NUPN
FORMULA Diffusion2D-PT-D50N050-UpperBounds-4 CANNOT_COMPUTE TECHNIQUES SEQUENTIAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS USE_NUPN
FORMULA Diffusion2D-PT-D50N050-UpperBounds-5 CANNOT_COMPUTE TECHNIQUES SEQUENTIAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS USE_NUPN
FORMULA Diffusion2D-PT-D50N050-UpperBounds-6 CANNOT_COMPUTE TECHNIQUES SEQUENTIAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS USE_NUPN
FORMULA Diffusion2D-PT-D50N050-UpperBounds-7 CANNOT_COMPUTE TECHNIQUES SEQUENTIAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS USE_NUPN
FORMULA Diffusion2D-PT-D50N050-UpperBounds-8 CANNOT_COMPUTE TECHNIQUES SEQUENTIAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS USE_NUPN
FORMULA Diffusion2D-PT-D50N050-UpperBounds-9 CANNOT_COMPUTE TECHNIQUES SEQUENTIAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS USE_NUPN
FORMULA Diffusion2D-PT-D50N050-UpperBounds-10 CANNOT_COMPUTE TECHNIQUES SEQUENTIAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS USE_NUPN
FORMULA Diffusion2D-PT-D50N050-UpperBounds-11 CANNOT_COMPUTE TECHNIQUES SEQUENTIAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS USE_NUPN
FORMULA Diffusion2D-PT-D50N050-UpperBounds-12 CANNOT_COMPUTE TECHNIQUES SEQUENTIAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS USE_NUPN
FORMULA Diffusion2D-PT-D50N050-UpperBounds-13 CANNOT_COMPUTE TECHNIQUES SEQUENTIAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS USE_NUPN
FORMULA Diffusion2D-PT-D50N050-UpperBounds-14 CANNOT_COMPUTE TECHNIQUES SEQUENTIAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS USE_NUPN
FORMULA Diffusion2D-PT-D50N050-UpperBounds-15 CANNOT_COMPUTE TECHNIQUES SEQUENTIAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS USE_NUPN
----- Kill lola and sara stderr -----
----- Kill lola and sara stdout -----
----- Finished stderr -----
----- Finished stdout -----

Sequence of Actions to be Executed by the VM

This is useful if one wants to reexecute the tool in the VM from the submitted image disk.

set -x
# this is for BenchKit: configuration of major elements for the test
export BK_INPUT="Diffusion2D-PT-D50N050"
export BK_EXAMINATION="UpperBounds"
export BK_TOOL="mcc4mcc-full"
export BK_RESULT_DIR="/tmp/BK_RESULTS/OUTPUTS"
export BK_TIME_CONFINEMENT="3600"
export BK_MEMORY_CONFINEMENT="16384"

# this is specific to your benchmark or test

export BIN_DIR="$HOME/BenchKit/bin"

# remove the execution directoty if it exists (to avoid increse of .vmdk images)
if [ -d execution ] ; then
rm -rf execution
fi

tar xzf /home/mcc/BenchKit/INPUTS/Diffusion2D-PT-D50N050.tgz
mv Diffusion2D-PT-D50N050 execution
cd execution
pwd
ls -lh

# this is for BenchKit: explicit launching of the test
echo "====================================================================="
echo " Generated by BenchKit 2-3637"
echo " Executing tool mcc4mcc-full"
echo " Input is Diffusion2D-PT-D50N050, examination is UpperBounds"
echo " Time confinement is $BK_TIME_CONFINEMENT seconds"
echo " Memory confinement is 16384 MBytes"
echo " Number of cores is 4"
echo " Run identifier is r082-blw3-152649949600296"
echo "====================================================================="
echo
echo "--------------------"
echo "content from stdout:"
echo
echo "=== Data for post analysis generated by BenchKit (invocation template)"
echo
if [ "UpperBounds" = "UpperBounds" ] ; then
echo "The expected result is a vector of positive values"
echo NUM_VECTOR
elif [ "UpperBounds" != "StateSpace" ] ; then
echo "The expected result is a vector of booleans"
echo BOOL_VECTOR
else
echo "no data necessary for post analysis"
fi
echo
if [ -f "UpperBounds.txt" ] ; then
echo "here is the order used to build the result vector(from text file)"
for x in $(grep Property UpperBounds.txt | cut -d ' ' -f 2 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ -f "UpperBounds.xml" ] ; then # for cunf (txt files deleted;-)
echo echo "here is the order used to build the result vector(from xml file)"
for x in $(grep '' UpperBounds.xml | cut -d '>' -f 2 | cut -d '<' -f 1 | sort -u) ; do
echo "FORMULA_NAME $x"
done
fi
echo
echo "=== Now, execution of the tool begins"
echo
echo -n "BK_START "
date -u +%s%3N
echo
timeout -s 9 $BK_TIME_CONFINEMENT bash -c "/home/mcc/BenchKit/BenchKit_head.sh 2> STDERR ; echo ; echo -n \"BK_STOP \" ; date -u +%s%3N"
if [ $? -eq 137 ] ; then
echo
echo "BK_TIME_CONFINEMENT_REACHED"
fi
echo
echo "--------------------"
echo "content from stderr:"
echo
cat STDERR ;