Execution Chart

We display below the execution chart for this examination (boot time has been removed).

Trace from the execution

Waiting for the VM to be ready (probing ssh)
...................................
/home/mcc/execution
total 240K
-rw-r--r-- 1 mcc users 4.4K May 15 18:54 CTLCardinality.txt
-rw-r--r-- 1 mcc users 23K May 15 18:54 CTLCardinality.xml
-rw-r--r-- 1 mcc users 2.6K May 15 18:54 CTLFireability.txt
-rw-r--r-- 1 mcc users 15K May 15 18:54 CTLFireability.xml
-rw-r--r-- 1 mcc users 4.0K May 15 18:50 GenericPropertiesDefinition.xml
-rw-r--r-- 1 mcc users 5.8K May 15 18:50 GenericPropertiesVerdict.xml
-rw-r--r-- 1 mcc users 3.0K May 15 18:54 LTLCardinality.txt
-rw-r--r-- 1 mcc users 14K May 15 18:54 LTLCardinality.xml
-rw-r--r-- 1 mcc users 2.1K May 15 18:54 LTLFireability.txt
-rw-r--r-- 1 mcc users 9.7K May 15 18:54 LTLFireability.xml
-rw-r--r-- 1 mcc users 4.1K May 15 18:54 ReachabilityCardinality.txt
-rw-r--r-- 1 mcc users 19K May 15 18:54 ReachabilityCardinality.xml
-rw-r--r-- 1 mcc users 113 May 15 18:54 ReachabilityDeadlock.txt
-rw-r--r-- 1 mcc users 351 May 15 18:54 ReachabilityDeadlock.xml
-rw-r--r-- 1 mcc users 3.8K May 15 18:54 ReachabilityFireability.txt
-rw-r--r-- 1 mcc users 22K May 15 18:54 ReachabilityFireability.xml
-rw-r--r-- 1 mcc users 1.8K May 15 18:54 UpperBounds.txt
-rw-r--r-- 1 mcc users 3.8K May 15 18:54 UpperBounds.xml
-rw-r--r-- 1 mcc users 6 May 15 18:50 equiv_col
-rw-r--r-- 1 mcc users 8 May 15 18:50 instance
-rw-r--r-- 1 mcc users 6 May 15 18:50 iscolored
-rw-r--r-- 1 mcc users 55K May 15 18:50 model.pnml
=====================================================================
Generated by BenchKit 2-3637
Executing tool mcc4mcc-full
Input is Diffusion2D-PT-D05N050, examination is UpperBounds
Time confinement is 3600 seconds
Memory confinement is 16384 MBytes
Number of cores is 4
Run identifier is r082-blw3-152649949400121
=====================================================================

--------------------
content from stdout:

=== Data for post analysis generated by BenchKit (invocation template)

The expected result is a vector of positive values
NUM_VECTOR

here is the order used to build the result vector(from text file)
FORMULA_NAME Diffusion2D-PT-D05N050-UpperBounds-00
FORMULA_NAME Diffusion2D-PT-D05N050-UpperBounds-01
FORMULA_NAME Diffusion2D-PT-D05N050-UpperBounds-02
FORMULA_NAME Diffusion2D-PT-D05N050-UpperBounds-03
FORMULA_NAME Diffusion2D-PT-D05N050-UpperBounds-04
FORMULA_NAME Diffusion2D-PT-D05N050-UpperBounds-05
FORMULA_NAME Diffusion2D-PT-D05N050-UpperBounds-06
FORMULA_NAME Diffusion2D-PT-D05N050-UpperBounds-07
FORMULA_NAME Diffusion2D-PT-D05N050-UpperBounds-08
FORMULA_NAME Diffusion2D-PT-D05N050-UpperBounds-09
FORMULA_NAME Diffusion2D-PT-D05N050-UpperBounds-10
FORMULA_NAME Diffusion2D-PT-D05N050-UpperBounds-11
FORMULA_NAME Diffusion2D-PT-D05N050-UpperBounds-12
FORMULA_NAME Diffusion2D-PT-D05N050-UpperBounds-13
FORMULA_NAME Diffusion2D-PT-D05N050-UpperBounds-14
FORMULA_NAME Diffusion2D-PT-D05N050-UpperBounds-15

=== Now, execution of the tool begins

BK_START 1527407209094


BK_STOP 1527407433260

--------------------
content from stderr:

Prefix is 65b80f64.
Reading known information in /usr/share/mcc4mcc/65b80f64-known.json.
Reading learned information in /usr/share/mcc4mcc/65b80f64-learned.json.
Reading value translations in /usr/share/mcc4mcc/65b80f64-values.json.
Using directory /home/mcc/execution for input, as it contains a model.pnml file.
Using Diffusion2D-PT-D05N050 as instance name.
Using Diffusion2D as model name.
Using algorithm or tool decision-tree.
Model characteristics are: {'Examination': 'UpperBounds', 'Place/Transition': True, 'Colored': False, 'Relative-Time': 1, 'Relative-Memory': 1, 'Ordinary': True, 'Simple Free Choice': True, 'Extended Free Choice': True, 'State Machine': True, 'Marked Graph': False, 'Connected': True, 'Strongly Connected': True, 'Source Place': False, 'Sink Place': False, 'Source Transition': False, 'Sink Transition': False, 'Loop Free': True, 'Conservative': True, 'Sub-Conservative': True, 'Nested Units': False, 'Safe': False, 'Deadlock': False, 'Reversible': True, 'Quasi Live': True, 'Live': True}.
Known tools are: [{'Time': 1966, 'Memory': 111.09, 'Tool': 'gspn'}, {'Time': 6281, 'Memory': 159.09, 'Tool': 'gspn'}, {'Time': 6298, 'Memory': 276.95, 'Tool': 'itstools'}, {'Time': 6478, 'Memory': 257.47, 'Tool': 'itstools'}, {'Time': 16755, 'Memory': 7482.5, 'Tool': 'marcie'}, {'Time': 19281, 'Memory': 7483.18, 'Tool': 'marcie'}, {'Time': 3540193, 'Memory': 8821.19, 'Tool': 'lola'}, {'Time': 3540378, 'Memory': 8780.74, 'Tool': 'lola'}].
Learned tools are: [{'Tool': 'lola'}].
Learned tool lola is 1800.7085452695828x far from the best tool gspn.
UpperBounds lola Diffusion2D-PT-D05N050...

Time: 3600 - MCC
----- Start make prepare stdout -----
----- Start make prepare stderr -----
===========================================================================================
Diffusion2D-PT-D05N050: translating PT Petri net model.pnml into LoLA format
===========================================================================================
translating PT Petri net complete


checking for too many tokens
===========================================================================================
Diffusion2D-PT-D05N050: translating PT formula UpperBounds into LoLA format
===========================================================================================
translating formula complete
touch formulae;
----- Start make result stdout -----
----- Start make result stderr -----
UpperBounds @ Diffusion2D-PT-D05N050 @ 3540 seconds
make: [verify] Error 134 (ignored)
----- Start make result stderr -----
Makefile:222: recipe for target 'verify' failed
----- Start make result stdout -----
lola: LoLA will run for 3540 seconds at most (--timelimit)
lola: NET
lola: reading net from model.pnml.lola
lola: finished parsing
lola: closed net file model.pnml.lola
lola: 169/65536 symbol table entries, 4 collisions
lola: preprocessing...
lola: finding significant places
lola: 25 places, 144 transitions, 24 significant places
lola: computing forward-conflicting sets
lola: computing back-conflicting sets
lola: 25 transition conflict sets
lola: TASK
lola: reading formula from Diffusion2D-PT-D05N050-UpperBounds.task
lola: MAX(cAMP__4_4_) : MAX(cAMP__1_3_) : MAX(cAMP__4_2_) : MAX(cAMP__5_1_) : MAX(cAMP__5_5_) : MAX(cAMP__1_5_) : MAX(cAMP__2_3_) : MAX(cAMP__2_1_) : MAX(cAMP__4_3_) : MAX(cAMP__3_3_) : MAX(cAMP__1_2_) : MAX(cAMP__3_4_) : MAX(cAMP__5_5_) : MAX(cAMP__4_1_) : MAX(cAMP__2_5_) : MAX(cAMP__1_2_)
lola: computing a collection of formulas
lola: RUNNING
lola: subprocess 0 will run for 221 seconds at most (--localtimelimit=-1)
lola: ========================================
lola: ...considering subproblem: MAX(cAMP__4_4_)
lola: ========================================
lola: SUBTASK
lola: computing bound of an expression
lola: STORE
lola: using a bit-perfect encoder (--encoder=bit)
lola: using 96 bytes per marking, with 0 unused bits
lola: using a prefix tree store (--store=prefix)
lola: SEARCH
lola: using bound preserving stubborn set method with insertion algorithm(--stubborn=tarjan)
lola: RUNNING
lola: 1215870 markings, 4494912 edges, 243174 markings/sec, 0 secs
lola: 2370528 markings, 8808706 edges, 230932 markings/sec, 5 secs
lola: 3501150 markings, 12998650 edges, 226124 markings/sec, 10 secs
lola: 4667435 markings, 17339426 edges, 233257 markings/sec, 15 secs
lola: 5844273 markings, 21786972 edges, 235368 markings/sec, 20 secs
lola: 7026623 markings, 26343682 edges, 236470 markings/sec, 25 secs
lola: 8233220 markings, 30937737 edges, 241319 markings/sec, 30 secs
lola: 9394053 markings, 35366119 edges, 232167 markings/sec, 35 secs
lola: 10569460 markings, 39727300 edges, 235081 markings/sec, 40 secs
lola: 11744120 markings, 44050058 edges, 234932 markings/sec, 45 secs
lola: 12934800 markings, 48525207 edges, 238136 markings/sec, 50 secs
lola: 14109628 markings, 52923515 edges, 234966 markings/sec, 55 secs
lola: 15286282 markings, 57384011 edges, 235331 markings/sec, 60 secs
lola: 16410315 markings, 61530247 edges, 224807 markings/sec, 65 secs
lola: 17569623 markings, 65949913 edges, 231862 markings/sec, 70 secs
lola: 18724833 markings, 70319365 edges, 231042 markings/sec, 75 secs
lola: 19863425 markings, 74706602 edges, 227718 markings/sec, 80 secs
lola: 20998103 markings, 79006370 edges, 226936 markings/sec, 85 secs
lola: 22111422 markings, 83229995 edges, 222664 markings/sec, 90 secs
lola: 23314423 markings, 87705917 edges, 240600 markings/sec, 95 secs
lola: 24528844 markings, 92245162 edges, 242884 markings/sec, 100 secs
lola: 25683991 markings, 96625906 edges, 231029 markings/sec, 105 secs
lola: 26828233 markings, 101017015 edges, 228848 markings/sec, 110 secs
lola: 27984282 markings, 105383164 edges, 231210 markings/sec, 115 secs
lola: 29184821 markings, 110031163 edges, 240108 markings/sec, 120 secs
lola: 30311038 markings, 114291607 edges, 225243 markings/sec, 125 secs
lola: 31452537 markings, 118594500 edges, 228300 markings/sec, 130 secs
lola: 32569292 markings, 122819122 edges, 223351 markings/sec, 135 secs
lola: 33701743 markings, 127061143 edges, 226490 markings/sec, 140 secs
lola: 34832495 markings, 131465392 edges, 226150 markings/sec, 145 secs
lola: 35981149 markings, 135810397 edges, 229731 markings/sec, 150 secs
lola: 37206363 markings, 140420668 edges, 245043 markings/sec, 155 secs
lola: 38356634 markings, 144737156 edges, 230054 markings/sec, 160 secs
lola: 39444510 markings, 148818073 edges, 217575 markings/sec, 165 secs
lola: 40584860 markings, 153228842 edges, 228070 markings/sec, 170 secs
lola: 41767667 markings, 157748996 edges, 236561 markings/sec, 175 secs
lola: 42866603 markings, 161869576 edges, 219787 markings/sec, 180 secs
lola: 43993336 markings, 166247942 edges, 225347 markings/sec, 185 secs
lola: 45105397 markings, 170401477 edges, 222412 markings/sec, 190 secs
lola: 46208873 markings, 174602819 edges, 220695 markings/sec, 195 secs
lola: 47320882 markings, 178828838 edges, 222402 markings/sec, 200 secs
lola: 48420046 markings, 183004302 edges, 219833 markings/sec, 205 secs
lola: 49550454 markings, 187331959 edges, 226082 markings/sec, 210 secs
lola: 50633246 markings, 191446283 edges, 216558 markings/sec, 215 secs
lola: local time limit reached - aborting
lola: Child process aborted or communication problem between parent and child process
terminate called after throwing an instance of 'std::runtime_error'
what(): parse error at position 0: unexpected character, last read: '\ufffd'
Aborted (core dumped)
FORMULA Diffusion2D-PT-D05N050-UpperBounds-0 CANNOT_COMPUTE TECHNIQUES SEQUENTIAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS USE_NUPN
FORMULA Diffusion2D-PT-D05N050-UpperBounds-1 CANNOT_COMPUTE TECHNIQUES SEQUENTIAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS USE_NUPN
FORMULA Diffusion2D-PT-D05N050-UpperBounds-2 CANNOT_COMPUTE TECHNIQUES SEQUENTIAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS USE_NUPN
FORMULA Diffusion2D-PT-D05N050-UpperBounds-3 CANNOT_COMPUTE TECHNIQUES SEQUENTIAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS USE_NUPN
FORMULA Diffusion2D-PT-D05N050-UpperBounds-4 CANNOT_COMPUTE TECHNIQUES SEQUENTIAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS USE_NUPN
FORMULA Diffusion2D-PT-D05N050-UpperBounds-5 CANNOT_COMPUTE TECHNIQUES SEQUENTIAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS USE_NUPN
FORMULA Diffusion2D-PT-D05N050-UpperBounds-6 CANNOT_COMPUTE TECHNIQUES SEQUENTIAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS USE_NUPN
FORMULA Diffusion2D-PT-D05N050-UpperBounds-7 CANNOT_COMPUTE TECHNIQUES SEQUENTIAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS USE_NUPN
FORMULA Diffusion2D-PT-D05N050-UpperBounds-8 CANNOT_COMPUTE TECHNIQUES SEQUENTIAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS USE_NUPN
FORMULA Diffusion2D-PT-D05N050-UpperBounds-9 CANNOT_COMPUTE TECHNIQUES SEQUENTIAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS USE_NUPN
FORMULA Diffusion2D-PT-D05N050-UpperBounds-10 CANNOT_COMPUTE TECHNIQUES SEQUENTIAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS USE_NUPN
FORMULA Diffusion2D-PT-D05N050-UpperBounds-11 CANNOT_COMPUTE TECHNIQUES SEQUENTIAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS USE_NUPN
FORMULA Diffusion2D-PT-D05N050-UpperBounds-12 CANNOT_COMPUTE TECHNIQUES SEQUENTIAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS USE_NUPN
FORMULA Diffusion2D-PT-D05N050-UpperBounds-13 CANNOT_COMPUTE TECHNIQUES SEQUENTIAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS USE_NUPN
FORMULA Diffusion2D-PT-D05N050-UpperBounds-14 CANNOT_COMPUTE TECHNIQUES SEQUENTIAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS USE_NUPN
FORMULA Diffusion2D-PT-D05N050-UpperBounds-15 CANNOT_COMPUTE TECHNIQUES SEQUENTIAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS USE_NUPN
----- Kill lola and sara stdout -----
----- Kill lola and sara stderr -----
----- Finished stdout -----
----- Finished stderr -----

Sequence of Actions to be Executed by the VM

This is useful if one wants to reexecute the tool in the VM from the submitted image disk.

set -x
# this is for BenchKit: configuration of major elements for the test
export BK_INPUT="Diffusion2D-PT-D05N050"
export BK_EXAMINATION="UpperBounds"
export BK_TOOL="mcc4mcc-full"
export BK_RESULT_DIR="/tmp/BK_RESULTS/OUTPUTS"
export BK_TIME_CONFINEMENT="3600"
export BK_MEMORY_CONFINEMENT="16384"

# this is specific to your benchmark or test

export BIN_DIR="$HOME/BenchKit/bin"

# remove the execution directoty if it exists (to avoid increse of .vmdk images)
if [ -d execution ] ; then
rm -rf execution
fi

tar xzf /home/mcc/BenchKit/INPUTS/Diffusion2D-PT-D05N050.tgz
mv Diffusion2D-PT-D05N050 execution
cd execution
pwd
ls -lh

# this is for BenchKit: explicit launching of the test
echo "====================================================================="
echo " Generated by BenchKit 2-3637"
echo " Executing tool mcc4mcc-full"
echo " Input is Diffusion2D-PT-D05N050, examination is UpperBounds"
echo " Time confinement is $BK_TIME_CONFINEMENT seconds"
echo " Memory confinement is 16384 MBytes"
echo " Number of cores is 4"
echo " Run identifier is r082-blw3-152649949400121"
echo "====================================================================="
echo
echo "--------------------"
echo "content from stdout:"
echo
echo "=== Data for post analysis generated by BenchKit (invocation template)"
echo
if [ "UpperBounds" = "UpperBounds" ] ; then
echo "The expected result is a vector of positive values"
echo NUM_VECTOR
elif [ "UpperBounds" != "StateSpace" ] ; then
echo "The expected result is a vector of booleans"
echo BOOL_VECTOR
else
echo "no data necessary for post analysis"
fi
echo
if [ -f "UpperBounds.txt" ] ; then
echo "here is the order used to build the result vector(from text file)"
for x in $(grep Property UpperBounds.txt | cut -d ' ' -f 2 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ -f "UpperBounds.xml" ] ; then # for cunf (txt files deleted;-)
echo echo "here is the order used to build the result vector(from xml file)"
for x in $(grep '' UpperBounds.xml | cut -d '>' -f 2 | cut -d '<' -f 1 | sort -u) ; do
echo "FORMULA_NAME $x"
done
fi
echo
echo "=== Now, execution of the tool begins"
echo
echo -n "BK_START "
date -u +%s%3N
echo
timeout -s 9 $BK_TIME_CONFINEMENT bash -c "/home/mcc/BenchKit/BenchKit_head.sh 2> STDERR ; echo ; echo -n \"BK_STOP \" ; date -u +%s%3N"
if [ $? -eq 137 ] ; then
echo
echo "BK_TIME_CONFINEMENT_REACHED"
fi
echo
echo "--------------------"
echo "content from stderr:"
echo
cat STDERR ;