Execution Chart

We display below the execution chart for this examination (boot time has been removed).

Trace from the execution

Waiting for the VM to be ready (probing ssh)
..................
/home/mcc/execution
total 2.2M
-rw-r--r-- 1 mcc users 3.6K May 15 18:54 CTLCardinality.txt
-rw-r--r-- 1 mcc users 21K May 15 18:54 CTLCardinality.xml
-rw-r--r-- 1 mcc users 2.5K May 15 18:54 CTLFireability.txt
-rw-r--r-- 1 mcc users 17K May 15 18:54 CTLFireability.xml
-rw-r--r-- 1 mcc users 4.0K May 15 18:50 GenericPropertiesDefinition.xml
-rw-r--r-- 1 mcc users 5.6K May 15 18:50 GenericPropertiesVerdict.xml
-rw-r--r-- 1 mcc users 2.5K May 15 18:54 LTLCardinality.txt
-rw-r--r-- 1 mcc users 13K May 15 18:54 LTLCardinality.xml
-rw-r--r-- 1 mcc users 1.8K May 15 18:54 LTLFireability.txt
-rw-r--r-- 1 mcc users 7.6K May 15 18:54 LTLFireability.xml
-rw-r--r-- 1 mcc users 2.8K May 15 18:54 ReachabilityCardinality.txt
-rw-r--r-- 1 mcc users 13K May 15 18:54 ReachabilityCardinality.xml
-rw-r--r-- 1 mcc users 105 May 15 18:54 ReachabilityDeadlock.txt
-rw-r--r-- 1 mcc users 343 May 15 18:54 ReachabilityDeadlock.xml
-rw-r--r-- 1 mcc users 2.4K May 15 18:54 ReachabilityFireability.txt
-rw-r--r-- 1 mcc users 13K May 15 18:54 ReachabilityFireability.xml
-rw-r--r-- 1 mcc users 1.6K May 15 18:54 UpperBounds.txt
-rw-r--r-- 1 mcc users 3.6K May 15 18:54 UpperBounds.xml
-rw-r--r-- 1 mcc users 6 May 15 18:50 equiv_col
-rw-r--r-- 1 mcc users 7 May 15 18:50 instance
-rw-r--r-- 1 mcc users 6 May 15 18:50 iscolored
-rw-r--r-- 1 mcc users 2.0M May 15 18:50 model.pnml
=====================================================================
Generated by BenchKit 2-3637
Executing tool itstoolsl
Input is Echo-PT-d03r07, examination is UpperBounds
Time confinement is 3600 seconds
Memory confinement is 16384 MBytes
Number of cores is 4
Run identifier is r081-blw3-152649948700464
=====================================================================

--------------------
content from stdout:

=== Data for post analysis generated by BenchKit (invocation template)

The expected result is a vector of positive values
NUM_VECTOR

here is the order used to build the result vector(from text file)
FORMULA_NAME Echo-PT-d03r07-UpperBounds-00
FORMULA_NAME Echo-PT-d03r07-UpperBounds-01
FORMULA_NAME Echo-PT-d03r07-UpperBounds-02
FORMULA_NAME Echo-PT-d03r07-UpperBounds-03
FORMULA_NAME Echo-PT-d03r07-UpperBounds-04
FORMULA_NAME Echo-PT-d03r07-UpperBounds-05
FORMULA_NAME Echo-PT-d03r07-UpperBounds-06
FORMULA_NAME Echo-PT-d03r07-UpperBounds-07
FORMULA_NAME Echo-PT-d03r07-UpperBounds-08
FORMULA_NAME Echo-PT-d03r07-UpperBounds-09
FORMULA_NAME Echo-PT-d03r07-UpperBounds-10
FORMULA_NAME Echo-PT-d03r07-UpperBounds-11
FORMULA_NAME Echo-PT-d03r07-UpperBounds-12
FORMULA_NAME Echo-PT-d03r07-UpperBounds-13
FORMULA_NAME Echo-PT-d03r07-UpperBounds-14
FORMULA_NAME Echo-PT-d03r07-UpperBounds-15

=== Now, execution of the tool begins

BK_START 1527387167063

Converted graph to binary with : CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.louvain.binaries_1.0.0.201805241334/bin/convert-linux64, -i, /tmp/graph1716528529387000322.txt, -o, /tmp/graph1716528529387000322.bin, -w, /tmp/graph1716528529387000322.weights], workingDir=null]
Built communities with : CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.louvain.binaries_1.0.0.201805241334/bin/louvain-linux64, /tmp/graph1716528529387000322.bin, -l, -1, -v, -w, /tmp/graph1716528529387000322.weights, -q, 0, -e, 0.001], workingDir=null]
Invoking ITS tools like this :CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.201805241334/bin/its-reach-linux64, --gc-threshold, 2000000, --quiet, -i, /home/mcc/execution/UpperBounds.pnml.gal, -t, CGAL, -reachable-file, UpperBounds.prop, --nowitness], workingDir=/home/mcc/execution]

its-reach command run as :

/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.201805241334/bin/its-reach-linux64 --gc-threshold 2000000 --quiet -i /home/mcc/execution/UpperBounds.pnml.gal -t CGAL -reachable-file UpperBounds.prop --nowitness
Loading property file UpperBounds.prop.
Read [bounds] property : Echo-PT-d03r07-UpperBounds-00 with value :i3.u76.p4084
Read [bounds] property : Echo-PT-d03r07-UpperBounds-01 with value :i7.u138.p3992
Read [bounds] property : Echo-PT-d03r07-UpperBounds-02 with value :i2.u13.p1172
Read [bounds] property : Echo-PT-d03r07-UpperBounds-03 with value :i11.u169.p1582
Read [bounds] property : Echo-PT-d03r07-UpperBounds-04 with value :i1.u187.p3680
Read [bounds] property : Echo-PT-d03r07-UpperBounds-05 with value :i4.u91.p2196
Read [bounds] property : Echo-PT-d03r07-UpperBounds-06 with value :i10.u86.p1754
Read [bounds] property : Echo-PT-d03r07-UpperBounds-07 with value :i5.u152.p3016
Read [bounds] property : Echo-PT-d03r07-UpperBounds-08 with value :i3.u76.p3234
Read [bounds] property : Echo-PT-d03r07-UpperBounds-09 with value :i2.u8.p2867
Read [bounds] property : Echo-PT-d03r07-UpperBounds-10 with value :i10.u110.p2102
Read [bounds] property : Echo-PT-d03r07-UpperBounds-11 with value :i3.u105.p3546
Read [bounds] property : Echo-PT-d03r07-UpperBounds-12 with value :i4.u117.p431
Read [bounds] property : Echo-PT-d03r07-UpperBounds-13 with value :i9.u186.p1675
Read [bounds] property : Echo-PT-d03r07-UpperBounds-14 with value :i4.u125.p2426
Read [bounds] property : Echo-PT-d03r07-UpperBounds-15 with value :i1.u82.p4120
built 77 ordering constraints for composite.
built 270 ordering constraints for composite.
built 360 ordering constraints for composite.
built 448 ordering constraints for composite.
built 236 ordering constraints for composite.
built 480 ordering constraints for composite.
built 359 ordering constraints for composite.
built 468 ordering constraints for composite.
built 376 ordering constraints for composite.
built 563 ordering constraints for composite.
built 481 ordering constraints for composite.
built 323 ordering constraints for composite.
built 288 ordering constraints for composite.

BK_STOP 1527387618013

--------------------
content from stderr:

+ export BINDIR=/home/mcc/BenchKit/
+ BINDIR=/home/mcc/BenchKit/
++ pwd
+ export MODEL=/home/mcc/execution
+ MODEL=/home/mcc/execution
+ /home/mcc/BenchKit//runeclipse.sh /home/mcc/execution UpperBounds -its -ltsminpath /home/mcc/BenchKit//lts_install_dir/ -louvain -smt
+ ulimit -s 65536
+ [[ -z '' ]]
+ export LTSMIN_MEM_SIZE=8589934592
+ LTSMIN_MEM_SIZE=8589934592
+ /home/mcc/BenchKit//itstools/its-tools -consoleLog -data /home/mcc/execution/workspace -pnfolder /home/mcc/execution -examination UpperBounds -z3path /home/mcc/BenchKit//z3/bin/z3 -yices2path /home/mcc/BenchKit//yices/bin/yices -its -ltsminpath /home/mcc/BenchKit//lts_install_dir/ -louvain -smt -vmargs -Dosgi.locking=none -Declipse.stateSaveDelayInterval=-1 -Dosgi.configuration.area=/tmp/.eclipse -Xss8m -Xms40m -Xmx8192m -Dfile.encoding=UTF-8 -Dosgi.requiredJavaVersion=1.6
May 27, 2018 2:12:48 AM fr.lip6.move.gal.application.Application start
INFO: Running its-tools with arguments : [-pnfolder, /home/mcc/execution, -examination, UpperBounds, -z3path, /home/mcc/BenchKit//z3/bin/z3, -yices2path, /home/mcc/BenchKit//yices/bin/yices, -its, -ltsminpath, /home/mcc/BenchKit//lts_install_dir/, -louvain, -smt]
May 27, 2018 2:12:48 AM fr.lip6.move.gal.application.MccTranslator transformPNML
INFO: Parsing pnml file : /home/mcc/execution/model.pnml
May 27, 2018 2:12:49 AM fr.lip6.move.gal.nupn.PTNetReader loadFromXML
INFO: Load time of PNML (sax parser for PT used): 378 ms
May 27, 2018 2:12:49 AM fr.lip6.move.gal.pnml.togal.PTGALTransformer handlePage
INFO: Transformed 4209 places.
May 27, 2018 2:12:49 AM fr.lip6.move.gal.pnml.togal.PTGALTransformer handlePage
INFO: Transformed 3518 transitions.
May 27, 2018 2:12:49 AM fr.lip6.move.gal.application.MccTranslator applyOrder
INFO: Applying decomposition
May 27, 2018 2:12:50 AM fr.lip6.move.gal.instantiate.GALRewriter flatten
INFO: Flatten gal took : 1025 ms
May 27, 2018 2:12:51 AM fr.lip6.move.gal.instantiate.GALRewriter flatten
INFO: Flatten gal took : 553 ms
Begin: Sun May 27 02:12:51 2018

Computation of communities with the Newman-Girvan Modularity quality function

level 0:
start computation: Sun May 27 02:12:51 2018
network size: 4209 nodes, 36100 links, 7036 weight
quality increased from -0.000340811 to 0.554862
end computation: Sun May 27 02:12:51 2018
level 1:
start computation: Sun May 27 02:12:51 2018
network size: 225 nodes, 3267 links, 7036 weight
quality increased from 0.554862 to 0.732166
end computation: Sun May 27 02:12:51 2018
level 2:
start computation: Sun May 27 02:12:51 2018
network size: 27 nodes, 261 links, 7036 weight
quality increased from 0.732166 to 0.74001
end computation: Sun May 27 02:12:51 2018
level 3:
start computation: Sun May 27 02:12:51 2018
network size: 12 nodes, 90 links, 7036 weight
quality increased from 0.74001 to 0.749343
end computation: Sun May 27 02:12:51 2018
End: Sun May 27 02:12:51 2018
Total duration: 0 sec
0.749343
May 27, 2018 2:12:52 AM fr.lip6.move.gal.instantiate.CompositeBuilder decomposeWithOrder
INFO: Decomposing Gal with order
May 27, 2018 2:12:52 AM fr.lip6.move.gal.instantiate.GALRewriter flatten
INFO: Flatten gal took : 479 ms
May 27, 2018 2:12:52 AM fr.lip6.move.gal.instantiate.CompositeBuilder rewriteArraysToAllowPartition
INFO: Rewriting arrays to variables to allow decomposition.
May 27, 2018 2:12:55 AM fr.lip6.move.gal.instantiate.Instantiator fuseIsomorphicEffects
INFO: Removed a total of 5880 redundant transitions.
May 27, 2018 2:12:55 AM fr.lip6.move.serialization.SerializationUtil systemToFile
INFO: Time to serialize gal into /home/mcc/execution/UpperBounds.pnml.gal : 64 ms
May 27, 2018 2:12:55 AM fr.lip6.move.serialization.SerializationUtil serializePropertiesForITSTools
INFO: Time to serialize properties into /home/mcc/execution/UpperBounds.prop : 0 ms
ITS-tools command line returned an error code 137

Sequence of Actions to be Executed by the VM

This is useful if one wants to reexecute the tool in the VM from the submitted image disk.

set -x
# this is for BenchKit: configuration of major elements for the test
export BK_INPUT="Echo-PT-d03r07"
export BK_EXAMINATION="UpperBounds"
export BK_TOOL="itstoolsl"
export BK_RESULT_DIR="/tmp/BK_RESULTS/OUTPUTS"
export BK_TIME_CONFINEMENT="3600"
export BK_MEMORY_CONFINEMENT="16384"

# this is specific to your benchmark or test

export BIN_DIR="$HOME/BenchKit/bin"

# remove the execution directoty if it exists (to avoid increse of .vmdk images)
if [ -d execution ] ; then
rm -rf execution
fi

tar xzf /home/mcc/BenchKit/INPUTS/Echo-PT-d03r07.tgz
mv Echo-PT-d03r07 execution
cd execution
pwd
ls -lh

# this is for BenchKit: explicit launching of the test
echo "====================================================================="
echo " Generated by BenchKit 2-3637"
echo " Executing tool itstoolsl"
echo " Input is Echo-PT-d03r07, examination is UpperBounds"
echo " Time confinement is $BK_TIME_CONFINEMENT seconds"
echo " Memory confinement is 16384 MBytes"
echo " Number of cores is 4"
echo " Run identifier is r081-blw3-152649948700464"
echo "====================================================================="
echo
echo "--------------------"
echo "content from stdout:"
echo
echo "=== Data for post analysis generated by BenchKit (invocation template)"
echo
if [ "UpperBounds" = "UpperBounds" ] ; then
echo "The expected result is a vector of positive values"
echo NUM_VECTOR
elif [ "UpperBounds" != "StateSpace" ] ; then
echo "The expected result is a vector of booleans"
echo BOOL_VECTOR
else
echo "no data necessary for post analysis"
fi
echo
if [ -f "UpperBounds.txt" ] ; then
echo "here is the order used to build the result vector(from text file)"
for x in $(grep Property UpperBounds.txt | cut -d ' ' -f 2 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ -f "UpperBounds.xml" ] ; then # for cunf (txt files deleted;-)
echo echo "here is the order used to build the result vector(from xml file)"
for x in $(grep '' UpperBounds.xml | cut -d '>' -f 2 | cut -d '<' -f 1 | sort -u) ; do
echo "FORMULA_NAME $x"
done
fi
echo
echo "=== Now, execution of the tool begins"
echo
echo -n "BK_START "
date -u +%s%3N
echo
timeout -s 9 $BK_TIME_CONFINEMENT bash -c "/home/mcc/BenchKit/BenchKit_head.sh 2> STDERR ; echo ; echo -n \"BK_STOP \" ; date -u +%s%3N"
if [ $? -eq 137 ] ; then
echo
echo "BK_TIME_CONFINEMENT_REACHED"
fi
echo
echo "--------------------"
echo "content from stderr:"
echo
cat STDERR ;