Execution Chart

We display below the execution chart for this examination (boot time has been removed).

Trace from the execution

Waiting for the VM to be ready (probing ssh)
................
/home/mcc/execution
total 1.5M
-rw-r--r-- 1 mcc users 3.9K May 15 18:54 CTLCardinality.txt
-rw-r--r-- 1 mcc users 22K May 15 18:54 CTLCardinality.xml
-rw-r--r-- 1 mcc users 2.6K May 15 18:54 CTLFireability.txt
-rw-r--r-- 1 mcc users 19K May 15 18:54 CTLFireability.xml
-rw-r--r-- 1 mcc users 4.0K May 15 18:50 GenericPropertiesDefinition.xml
-rw-r--r-- 1 mcc users 5.6K May 15 18:50 GenericPropertiesVerdict.xml
-rw-r--r-- 1 mcc users 2.3K May 15 18:54 LTLCardinality.txt
-rw-r--r-- 1 mcc users 10K May 15 18:54 LTLCardinality.xml
-rw-r--r-- 1 mcc users 1.8K May 15 18:54 LTLFireability.txt
-rw-r--r-- 1 mcc users 9.1K May 15 18:54 LTLFireability.xml
-rw-r--r-- 1 mcc users 3.6K May 15 18:54 ReachabilityCardinality.txt
-rw-r--r-- 1 mcc users 18K May 15 18:54 ReachabilityCardinality.xml
-rw-r--r-- 1 mcc users 105 May 15 18:54 ReachabilityDeadlock.txt
-rw-r--r-- 1 mcc users 343 May 15 18:54 ReachabilityDeadlock.xml
-rw-r--r-- 1 mcc users 2.4K May 15 18:54 ReachabilityFireability.txt
-rw-r--r-- 1 mcc users 14K May 15 18:54 ReachabilityFireability.xml
-rw-r--r-- 1 mcc users 1.6K May 15 18:54 UpperBounds.txt
-rw-r--r-- 1 mcc users 3.6K May 15 18:54 UpperBounds.xml
-rw-r--r-- 1 mcc users 6 May 15 18:50 equiv_col
-rw-r--r-- 1 mcc users 7 May 15 18:50 instance
-rw-r--r-- 1 mcc users 6 May 15 18:50 iscolored
-rw-r--r-- 1 mcc users 1.4M May 15 18:50 model.pnml
=====================================================================
Generated by BenchKit 2-3637
Executing tool itstoolsl
Input is Echo-PT-d02r19, examination is CTLFireability
Time confinement is 3600 seconds
Memory confinement is 16384 MBytes
Number of cores is 4
Run identifier is r081-blw3-152649948700445
=====================================================================

--------------------
content from stdout:

=== Data for post analysis generated by BenchKit (invocation template)

The expected result is a vector of booleans
BOOL_VECTOR

here is the order used to build the result vector(from text file)
FORMULA_NAME Echo-PT-d02r19-CTLFireability-00
FORMULA_NAME Echo-PT-d02r19-CTLFireability-01
FORMULA_NAME Echo-PT-d02r19-CTLFireability-02
FORMULA_NAME Echo-PT-d02r19-CTLFireability-03
FORMULA_NAME Echo-PT-d02r19-CTLFireability-04
FORMULA_NAME Echo-PT-d02r19-CTLFireability-05
FORMULA_NAME Echo-PT-d02r19-CTLFireability-06
FORMULA_NAME Echo-PT-d02r19-CTLFireability-07
FORMULA_NAME Echo-PT-d02r19-CTLFireability-08
FORMULA_NAME Echo-PT-d02r19-CTLFireability-09
FORMULA_NAME Echo-PT-d02r19-CTLFireability-10
FORMULA_NAME Echo-PT-d02r19-CTLFireability-11
FORMULA_NAME Echo-PT-d02r19-CTLFireability-12
FORMULA_NAME Echo-PT-d02r19-CTLFireability-13
FORMULA_NAME Echo-PT-d02r19-CTLFireability-14
FORMULA_NAME Echo-PT-d02r19-CTLFireability-15

=== Now, execution of the tool begins

BK_START 1527379059061

Converted graph to binary with : CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.louvain.binaries_1.0.0.201805241334/bin/convert-linux64, -i, /tmp/graph8864455710158319915.txt, -o, /tmp/graph8864455710158319915.bin, -w, /tmp/graph8864455710158319915.weights], workingDir=null]
Built communities with : CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.louvain.binaries_1.0.0.201805241334/bin/louvain-linux64, /tmp/graph8864455710158319915.bin, -l, -1, -v, -w, /tmp/graph8864455710158319915.weights, -q, 0, -e, 0.001], workingDir=null]
Invoking ITS tools like this :CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.201805241334/bin/its-ctl-linux64, --gc-threshold, 2000000, --quiet, -i, /home/mcc/execution/CTLFireability.pnml.gal, -t, CGAL, -ctl, /home/mcc/execution/CTLFireability.ctl], workingDir=/home/mcc/execution]

its-ctl command run as :

/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.201805241334/bin/its-ctl-linux64 --gc-threshold 2000000 --quiet -i /home/mcc/execution/CTLFireability.pnml.gal -t CGAL -ctl /home/mcc/execution/CTLFireability.ctl
No direction supplied, using forward translation only.
Parsed 16 CTL formulae.
built 64 ordering constraints for composite.
built 108 ordering constraints for composite.
built 141 ordering constraints for composite.
built 168 ordering constraints for composite.
built 191 ordering constraints for composite.
built 98 ordering constraints for composite.
built 208 ordering constraints for composite.
built 190 ordering constraints for composite.
built 150 ordering constraints for composite.
built 202 ordering constraints for composite.
built 200 ordering constraints for composite.
built 162 ordering constraints for composite.
built 151 ordering constraints for composite.
built 167 ordering constraints for composite.
built 180 ordering constraints for composite.
built 188 ordering constraints for composite.
terminate called after throwing an instance of 'std::bad_alloc'
what(): std::bad_alloc

BK_STOP 1527379564676

--------------------
content from stderr:

+ export BINDIR=/home/mcc/BenchKit/
+ BINDIR=/home/mcc/BenchKit/
++ pwd
+ export MODEL=/home/mcc/execution
+ MODEL=/home/mcc/execution
+ /home/mcc/BenchKit//runeclipse.sh /home/mcc/execution CTLFireability -its -ltsminpath /home/mcc/BenchKit//lts_install_dir/ -louvain -smt
+ ulimit -s 65536
+ [[ -z '' ]]
+ export LTSMIN_MEM_SIZE=8589934592
+ LTSMIN_MEM_SIZE=8589934592
+ /home/mcc/BenchKit//itstools/its-tools -consoleLog -data /home/mcc/execution/workspace -pnfolder /home/mcc/execution -examination CTLFireability -z3path /home/mcc/BenchKit//z3/bin/z3 -yices2path /home/mcc/BenchKit//yices/bin/yices -its -ltsminpath /home/mcc/BenchKit//lts_install_dir/ -louvain -smt -vmargs -Dosgi.locking=none -Declipse.stateSaveDelayInterval=-1 -Dosgi.configuration.area=/tmp/.eclipse -Xss8m -Xms40m -Xmx8192m -Dfile.encoding=UTF-8 -Dosgi.requiredJavaVersion=1.6
May 26, 2018 11:57:40 PM fr.lip6.move.gal.application.Application start
INFO: Running its-tools with arguments : [-pnfolder, /home/mcc/execution, -examination, CTLFireability, -z3path, /home/mcc/BenchKit//z3/bin/z3, -yices2path, /home/mcc/BenchKit//yices/bin/yices, -its, -ltsminpath, /home/mcc/BenchKit//lts_install_dir/, -louvain, -smt]
May 26, 2018 11:57:40 PM fr.lip6.move.gal.application.MccTranslator transformPNML
INFO: Parsing pnml file : /home/mcc/execution/model.pnml
May 26, 2018 11:57:40 PM fr.lip6.move.gal.nupn.PTNetReader loadFromXML
INFO: Load time of PNML (sax parser for PT used): 251 ms
May 26, 2018 11:57:40 PM fr.lip6.move.gal.pnml.togal.PTGALTransformer handlePage
INFO: Transformed 3455 places.
May 26, 2018 11:57:41 PM fr.lip6.move.gal.pnml.togal.PTGALTransformer handlePage
INFO: Transformed 2730 transitions.
May 26, 2018 11:57:41 PM fr.lip6.move.gal.application.MccTranslator applyOrder
INFO: Applying decomposition
May 26, 2018 11:57:41 PM fr.lip6.move.gal.instantiate.GALRewriter flatten
INFO: Flatten gal took : 749 ms
May 26, 2018 11:57:42 PM fr.lip6.move.gal.instantiate.GALRewriter flatten
INFO: Flatten gal took : 381 ms
Begin: Sat May 26 23:57:43 2018

Computation of communities with the Newman-Girvan Modularity quality function

level 0:
start computation: Sat May 26 23:57:43 2018
network size: 3455 nodes, 24132 links, 5460 weight
quality increased from -0.000380386 to 0.614775
end computation: Sat May 26 23:57:43 2018
level 1:
start computation: Sat May 26 23:57:43 2018
network size: 222 nodes, 1966 links, 5460 weight
quality increased from 0.614775 to 0.800655
end computation: Sat May 26 23:57:43 2018
level 2:
start computation: Sat May 26 23:57:43 2018
network size: 36 nodes, 208 links, 5460 weight
quality increased from 0.800655 to 0.826381
end computation: Sat May 26 23:57:43 2018
level 3:
start computation: Sat May 26 23:57:43 2018
network size: 15 nodes, 79 links, 5460 weight
quality increased from 0.826381 to 0.826381
end computation: Sat May 26 23:57:43 2018
End: Sat May 26 23:57:43 2018
Total duration: 0 sec
0.826381
May 26, 2018 11:57:43 PM fr.lip6.move.gal.instantiate.CompositeBuilder decomposeWithOrder
INFO: Decomposing Gal with order
May 26, 2018 11:57:43 PM fr.lip6.move.gal.instantiate.GALRewriter flatten
INFO: Flatten gal took : 361 ms
May 26, 2018 11:57:43 PM fr.lip6.move.gal.instantiate.CompositeBuilder rewriteArraysToAllowPartition
INFO: Rewriting arrays to variables to allow decomposition.
May 26, 2018 11:57:44 PM fr.lip6.move.gal.instantiate.Instantiator fuseIsomorphicEffects
INFO: Removed a total of 2576 redundant transitions.
May 26, 2018 11:57:45 PM fr.lip6.move.serialization.SerializationUtil systemToFile
INFO: Time to serialize gal into /home/mcc/execution/CTLFireability.pnml.gal : 58 ms
May 26, 2018 11:57:45 PM fr.lip6.move.serialization.SerializationUtil serializePropertiesForITSCTLTools
INFO: Time to serialize properties into /home/mcc/execution/CTLFireability.ctl : 2 ms
ITS-tools command line returned an error code 134

Sequence of Actions to be Executed by the VM

This is useful if one wants to reexecute the tool in the VM from the submitted image disk.

set -x
# this is for BenchKit: configuration of major elements for the test
export BK_INPUT="Echo-PT-d02r19"
export BK_EXAMINATION="CTLFireability"
export BK_TOOL="itstoolsl"
export BK_RESULT_DIR="/tmp/BK_RESULTS/OUTPUTS"
export BK_TIME_CONFINEMENT="3600"
export BK_MEMORY_CONFINEMENT="16384"

# this is specific to your benchmark or test

export BIN_DIR="$HOME/BenchKit/bin"

# remove the execution directoty if it exists (to avoid increse of .vmdk images)
if [ -d execution ] ; then
rm -rf execution
fi

tar xzf /home/mcc/BenchKit/INPUTS/Echo-PT-d02r19.tgz
mv Echo-PT-d02r19 execution
cd execution
pwd
ls -lh

# this is for BenchKit: explicit launching of the test
echo "====================================================================="
echo " Generated by BenchKit 2-3637"
echo " Executing tool itstoolsl"
echo " Input is Echo-PT-d02r19, examination is CTLFireability"
echo " Time confinement is $BK_TIME_CONFINEMENT seconds"
echo " Memory confinement is 16384 MBytes"
echo " Number of cores is 4"
echo " Run identifier is r081-blw3-152649948700445"
echo "====================================================================="
echo
echo "--------------------"
echo "content from stdout:"
echo
echo "=== Data for post analysis generated by BenchKit (invocation template)"
echo
if [ "CTLFireability" = "UpperBounds" ] ; then
echo "The expected result is a vector of positive values"
echo NUM_VECTOR
elif [ "CTLFireability" != "StateSpace" ] ; then
echo "The expected result is a vector of booleans"
echo BOOL_VECTOR
else
echo "no data necessary for post analysis"
fi
echo
if [ -f "CTLFireability.txt" ] ; then
echo "here is the order used to build the result vector(from text file)"
for x in $(grep Property CTLFireability.txt | cut -d ' ' -f 2 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ -f "CTLFireability.xml" ] ; then # for cunf (txt files deleted;-)
echo echo "here is the order used to build the result vector(from xml file)"
for x in $(grep '' CTLFireability.xml | cut -d '>' -f 2 | cut -d '<' -f 1 | sort -u) ; do
echo "FORMULA_NAME $x"
done
fi
echo
echo "=== Now, execution of the tool begins"
echo
echo -n "BK_START "
date -u +%s%3N
echo
timeout -s 9 $BK_TIME_CONFINEMENT bash -c "/home/mcc/BenchKit/BenchKit_head.sh 2> STDERR ; echo ; echo -n \"BK_STOP \" ; date -u +%s%3N"
if [ $? -eq 137 ] ; then
echo
echo "BK_TIME_CONFINEMENT_REACHED"
fi
echo
echo "--------------------"
echo "content from stderr:"
echo
cat STDERR ;