Execution Chart

We display below the execution chart for this examination (boot time has been removed).

Trace from the execution

Waiting for the VM to be ready (probing ssh)
.................
/home/mcc/execution
total 432K
-rw-r--r-- 1 mcc users 3.6K May 15 18:54 CTLCardinality.txt
-rw-r--r-- 1 mcc users 21K May 15 18:54 CTLCardinality.xml
-rw-r--r-- 1 mcc users 2.3K May 15 18:54 CTLFireability.txt
-rw-r--r-- 1 mcc users 15K May 15 18:54 CTLFireability.xml
-rw-r--r-- 1 mcc users 4.0K May 15 18:50 GenericPropertiesDefinition.xml
-rw-r--r-- 1 mcc users 5.6K May 15 18:50 GenericPropertiesVerdict.xml
-rw-r--r-- 1 mcc users 2.4K May 15 18:54 LTLCardinality.txt
-rw-r--r-- 1 mcc users 12K May 15 18:54 LTLCardinality.xml
-rw-r--r-- 1 mcc users 1.7K May 15 18:54 LTLFireability.txt
-rw-r--r-- 1 mcc users 7.5K May 15 18:54 LTLFireability.xml
-rw-r--r-- 1 mcc users 3.4K May 15 18:54 ReachabilityCardinality.txt
-rw-r--r-- 1 mcc users 18K May 15 18:54 ReachabilityCardinality.xml
-rw-r--r-- 1 mcc users 105 May 15 18:54 ReachabilityDeadlock.txt
-rw-r--r-- 1 mcc users 343 May 15 18:54 ReachabilityDeadlock.xml
-rw-r--r-- 1 mcc users 2.8K May 15 18:54 ReachabilityFireability.txt
-rw-r--r-- 1 mcc users 17K May 15 18:54 ReachabilityFireability.xml
-rw-r--r-- 1 mcc users 1.6K May 15 18:54 UpperBounds.txt
-rw-r--r-- 1 mcc users 3.6K May 15 18:54 UpperBounds.xml
-rw-r--r-- 1 mcc users 6 May 15 18:50 equiv_col
-rw-r--r-- 1 mcc users 7 May 15 18:50 instance
-rw-r--r-- 1 mcc users 6 May 15 18:50 iscolored
-rw-r--r-- 1 mcc users 266K May 15 18:50 model.pnml
=====================================================================
Generated by BenchKit 2-3637
Executing tool itstoolsl
Input is Echo-PT-d02r09, examination is UpperBounds
Time confinement is 3600 seconds
Memory confinement is 16384 MBytes
Number of cores is 4
Run identifier is r081-blw3-152649948700422
=====================================================================

--------------------
content from stdout:

=== Data for post analysis generated by BenchKit (invocation template)

The expected result is a vector of positive values
NUM_VECTOR

here is the order used to build the result vector(from text file)
FORMULA_NAME Echo-PT-d02r09-UpperBounds-00
FORMULA_NAME Echo-PT-d02r09-UpperBounds-01
FORMULA_NAME Echo-PT-d02r09-UpperBounds-02
FORMULA_NAME Echo-PT-d02r09-UpperBounds-03
FORMULA_NAME Echo-PT-d02r09-UpperBounds-04
FORMULA_NAME Echo-PT-d02r09-UpperBounds-05
FORMULA_NAME Echo-PT-d02r09-UpperBounds-06
FORMULA_NAME Echo-PT-d02r09-UpperBounds-07
FORMULA_NAME Echo-PT-d02r09-UpperBounds-08
FORMULA_NAME Echo-PT-d02r09-UpperBounds-09
FORMULA_NAME Echo-PT-d02r09-UpperBounds-10
FORMULA_NAME Echo-PT-d02r09-UpperBounds-11
FORMULA_NAME Echo-PT-d02r09-UpperBounds-12
FORMULA_NAME Echo-PT-d02r09-UpperBounds-13
FORMULA_NAME Echo-PT-d02r09-UpperBounds-14
FORMULA_NAME Echo-PT-d02r09-UpperBounds-15

=== Now, execution of the tool begins

BK_START 1527368573079

Converted graph to binary with : CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.louvain.binaries_1.0.0.201805241334/bin/convert-linux64, -i, /tmp/graph8845214906549820844.txt, -o, /tmp/graph8845214906549820844.bin, -w, /tmp/graph8845214906549820844.weights], workingDir=null]
Built communities with : CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.louvain.binaries_1.0.0.201805241334/bin/louvain-linux64, /tmp/graph8845214906549820844.bin, -l, -1, -v, -w, /tmp/graph8845214906549820844.weights, -q, 0, -e, 0.001], workingDir=null]
Invoking ITS tools like this :CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.201805241334/bin/its-reach-linux64, --gc-threshold, 2000000, --quiet, -i, /home/mcc/execution/UpperBounds.pnml.gal, -t, CGAL, -reachable-file, UpperBounds.prop, --nowitness], workingDir=/home/mcc/execution]

its-reach command run as :

/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.201805241334/bin/its-reach-linux64 --gc-threshold 2000000 --quiet -i /home/mcc/execution/UpperBounds.pnml.gal -t CGAL -reachable-file UpperBounds.prop --nowitness
Loading property file UpperBounds.prop.
Read [bounds] property : Echo-PT-d02r09-UpperBounds-00 with value :i0.u9.p314
Read [bounds] property : Echo-PT-d02r09-UpperBounds-01 with value :i8.u26.p489
Read [bounds] property : Echo-PT-d02r09-UpperBounds-02 with value :i6.u28.p41
Read [bounds] property : Echo-PT-d02r09-UpperBounds-03 with value :i2.u13.p608
Read [bounds] property : Echo-PT-d02r09-UpperBounds-04 with value :i6.u23.p32
Read [bounds] property : Echo-PT-d02r09-UpperBounds-05 with value :i2.u13.p357
Read [bounds] property : Echo-PT-d02r09-UpperBounds-06 with value :i0.u12.p597
Read [bounds] property : Echo-PT-d02r09-UpperBounds-07 with value :i0.u36.p728
Read [bounds] property : Echo-PT-d02r09-UpperBounds-08 with value :i1.u1.p430
Read [bounds] property : Echo-PT-d02r09-UpperBounds-09 with value :i4.u31.p292
Read [bounds] property : Echo-PT-d02r09-UpperBounds-10 with value :i6.u23.p157
Read [bounds] property : Echo-PT-d02r09-UpperBounds-11 with value :i2.u38.p731
Read [bounds] property : Echo-PT-d02r09-UpperBounds-12 with value :i6.u28.p508
Read [bounds] property : Echo-PT-d02r09-UpperBounds-13 with value :i1.u8.p212
Read [bounds] property : Echo-PT-d02r09-UpperBounds-14 with value :u5.p231
Read [bounds] property : Echo-PT-d02r09-UpperBounds-15 with value :i10.u39.p389
built 33 ordering constraints for composite.
built 98 ordering constraints for composite.
built 52 ordering constraints for composite.
built 66 ordering constraints for composite.
built 42 ordering constraints for composite.
built 66 ordering constraints for composite.
built 50 ordering constraints for composite.
built 42 ordering constraints for composite.
built 60 ordering constraints for composite.
built 42 ordering constraints for composite.
built 66 ordering constraints for composite.

BK_STOP 1527369147609

--------------------
content from stderr:

+ export BINDIR=/home/mcc/BenchKit/
+ BINDIR=/home/mcc/BenchKit/
++ pwd
+ export MODEL=/home/mcc/execution
+ MODEL=/home/mcc/execution
+ /home/mcc/BenchKit//runeclipse.sh /home/mcc/execution UpperBounds -its -ltsminpath /home/mcc/BenchKit//lts_install_dir/ -louvain -smt
+ ulimit -s 65536
+ [[ -z '' ]]
+ export LTSMIN_MEM_SIZE=8589934592
+ LTSMIN_MEM_SIZE=8589934592
+ /home/mcc/BenchKit//itstools/its-tools -consoleLog -data /home/mcc/execution/workspace -pnfolder /home/mcc/execution -examination UpperBounds -z3path /home/mcc/BenchKit//z3/bin/z3 -yices2path /home/mcc/BenchKit//yices/bin/yices -its -ltsminpath /home/mcc/BenchKit//lts_install_dir/ -louvain -smt -vmargs -Dosgi.locking=none -Declipse.stateSaveDelayInterval=-1 -Dosgi.configuration.area=/tmp/.eclipse -Xss8m -Xms40m -Xmx8192m -Dfile.encoding=UTF-8 -Dosgi.requiredJavaVersion=1.6
May 26, 2018 9:02:54 PM fr.lip6.move.gal.application.Application start
INFO: Running its-tools with arguments : [-pnfolder, /home/mcc/execution, -examination, UpperBounds, -z3path, /home/mcc/BenchKit//z3/bin/z3, -yices2path, /home/mcc/BenchKit//yices/bin/yices, -its, -ltsminpath, /home/mcc/BenchKit//lts_install_dir/, -louvain, -smt]
May 26, 2018 9:02:54 PM fr.lip6.move.gal.application.MccTranslator transformPNML
INFO: Parsing pnml file : /home/mcc/execution/model.pnml
May 26, 2018 9:02:54 PM fr.lip6.move.gal.nupn.PTNetReader loadFromXML
INFO: Load time of PNML (sax parser for PT used): 119 ms
May 26, 2018 9:02:54 PM fr.lip6.move.gal.pnml.togal.PTGALTransformer handlePage
INFO: Transformed 735 places.
May 26, 2018 9:02:54 PM fr.lip6.move.gal.pnml.togal.PTGALTransformer handlePage
INFO: Transformed 570 transitions.
May 26, 2018 9:02:55 PM fr.lip6.move.serialization.SerializationUtil systemToFile
INFO: Time to serialize gal into /home/mcc/execution/model.pnml.img.gal : 30 ms
May 26, 2018 9:02:55 PM fr.lip6.move.gal.application.MccTranslator applyOrder
INFO: Applying decomposition
May 26, 2018 9:02:55 PM fr.lip6.move.gal.instantiate.GALRewriter flatten
INFO: Flatten gal took : 229 ms
May 26, 2018 9:02:55 PM fr.lip6.move.gal.instantiate.GALRewriter flatten
INFO: Flatten gal took : 143 ms
Begin: Sat May 26 21:02:55 2018

Computation of communities with the Newman-Girvan Modularity quality function

level 0:
start computation: Sat May 26 21:02:55 2018
network size: 735 nodes, 4932 links, 1140 weight
quality increased from -0.00176501 to 0.635948
end computation: Sat May 26 21:02:55 2018
level 1:
start computation: Sat May 26 21:02:55 2018
network size: 40 nodes, 282 links, 1140 weight
quality increased from 0.635948 to 0.724673
end computation: Sat May 26 21:02:55 2018
level 2:
start computation: Sat May 26 21:02:55 2018
network size: 13 nodes, 67 links, 1140 weight
quality increased from 0.724673 to 0.727643
end computation: Sat May 26 21:02:55 2018
level 3:
start computation: Sat May 26 21:02:55 2018
network size: 11 nodes, 57 links, 1140 weight
quality increased from 0.727643 to 0.727643
end computation: Sat May 26 21:02:55 2018
End: Sat May 26 21:02:55 2018
Total duration: 0 sec
0.727643
May 26, 2018 9:02:55 PM fr.lip6.move.gal.instantiate.CompositeBuilder decomposeWithOrder
INFO: Decomposing Gal with order
May 26, 2018 9:02:55 PM fr.lip6.move.gal.instantiate.GALRewriter flatten
INFO: Flatten gal took : 97 ms
May 26, 2018 9:02:55 PM fr.lip6.move.gal.instantiate.CompositeBuilder rewriteArraysToAllowPartition
INFO: Rewriting arrays to variables to allow decomposition.
May 26, 2018 9:02:56 PM fr.lip6.move.gal.instantiate.Instantiator fuseIsomorphicEffects
INFO: Removed a total of 421 redundant transitions.
May 26, 2018 9:02:56 PM fr.lip6.move.serialization.SerializationUtil systemToFile
INFO: Time to serialize gal into /home/mcc/execution/UpperBounds.pnml.gal : 16 ms
May 26, 2018 9:02:56 PM fr.lip6.move.serialization.SerializationUtil serializePropertiesForITSTools
INFO: Time to serialize properties into /home/mcc/execution/UpperBounds.prop : 1 ms
ITS-tools command line returned an error code 137

Sequence of Actions to be Executed by the VM

This is useful if one wants to reexecute the tool in the VM from the submitted image disk.

set -x
# this is for BenchKit: configuration of major elements for the test
export BK_INPUT="Echo-PT-d02r09"
export BK_EXAMINATION="UpperBounds"
export BK_TOOL="itstoolsl"
export BK_RESULT_DIR="/tmp/BK_RESULTS/OUTPUTS"
export BK_TIME_CONFINEMENT="3600"
export BK_MEMORY_CONFINEMENT="16384"

# this is specific to your benchmark or test

export BIN_DIR="$HOME/BenchKit/bin"

# remove the execution directoty if it exists (to avoid increse of .vmdk images)
if [ -d execution ] ; then
rm -rf execution
fi

tar xzf /home/mcc/BenchKit/INPUTS/Echo-PT-d02r09.tgz
mv Echo-PT-d02r09 execution
cd execution
pwd
ls -lh

# this is for BenchKit: explicit launching of the test
echo "====================================================================="
echo " Generated by BenchKit 2-3637"
echo " Executing tool itstoolsl"
echo " Input is Echo-PT-d02r09, examination is UpperBounds"
echo " Time confinement is $BK_TIME_CONFINEMENT seconds"
echo " Memory confinement is 16384 MBytes"
echo " Number of cores is 4"
echo " Run identifier is r081-blw3-152649948700422"
echo "====================================================================="
echo
echo "--------------------"
echo "content from stdout:"
echo
echo "=== Data for post analysis generated by BenchKit (invocation template)"
echo
if [ "UpperBounds" = "UpperBounds" ] ; then
echo "The expected result is a vector of positive values"
echo NUM_VECTOR
elif [ "UpperBounds" != "StateSpace" ] ; then
echo "The expected result is a vector of booleans"
echo BOOL_VECTOR
else
echo "no data necessary for post analysis"
fi
echo
if [ -f "UpperBounds.txt" ] ; then
echo "here is the order used to build the result vector(from text file)"
for x in $(grep Property UpperBounds.txt | cut -d ' ' -f 2 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ -f "UpperBounds.xml" ] ; then # for cunf (txt files deleted;-)
echo echo "here is the order used to build the result vector(from xml file)"
for x in $(grep '' UpperBounds.xml | cut -d '>' -f 2 | cut -d '<' -f 1 | sort -u) ; do
echo "FORMULA_NAME $x"
done
fi
echo
echo "=== Now, execution of the tool begins"
echo
echo -n "BK_START "
date -u +%s%3N
echo
timeout -s 9 $BK_TIME_CONFINEMENT bash -c "/home/mcc/BenchKit/BenchKit_head.sh 2> STDERR ; echo ; echo -n \"BK_STOP \" ; date -u +%s%3N"
if [ $? -eq 137 ] ; then
echo
echo "BK_TIME_CONFINEMENT_REACHED"
fi
echo
echo "--------------------"
echo "content from stderr:"
echo
cat STDERR ;