Execution Chart

We display below the execution chart for this examination (boot time has been removed).

Trace from the execution

Waiting for the VM to be ready (probing ssh)
................
/home/mcc/execution
total 8.2M
-rw-r--r-- 1 mcc users 152K May 15 18:54 CTLCardinality.txt
-rw-r--r-- 1 mcc users 437K May 15 18:54 CTLCardinality.xml
-rw-r--r-- 1 mcc users 205K May 15 18:54 CTLFireability.txt
-rw-r--r-- 1 mcc users 733K May 15 18:54 CTLFireability.xml
-rw-r--r-- 1 mcc users 4.0K May 15 18:50 GenericPropertiesDefinition.xml
-rw-r--r-- 1 mcc users 6.3K May 15 18:50 GenericPropertiesVerdict.xml
-rw-r--r-- 1 mcc users 108K May 15 18:54 LTLCardinality.txt
-rw-r--r-- 1 mcc users 309K May 15 18:54 LTLCardinality.xml
-rw-r--r-- 1 mcc users 102K May 15 18:54 LTLFireability.txt
-rw-r--r-- 1 mcc users 362K May 15 18:54 LTLFireability.xml
-rw-r--r-- 1 mcc users 116K May 15 18:54 ReachabilityCardinality.txt
-rw-r--r-- 1 mcc users 321K May 15 18:54 ReachabilityCardinality.xml
-rw-r--r-- 1 mcc users 114 May 15 18:54 ReachabilityDeadlock.txt
-rw-r--r-- 1 mcc users 352 May 15 18:54 ReachabilityDeadlock.xml
-rw-r--r-- 1 mcc users 259K May 15 18:54 ReachabilityFireability.txt
-rw-r--r-- 1 mcc users 913K May 15 18:54 ReachabilityFireability.xml
-rw-r--r-- 1 mcc users 50K May 15 18:54 UpperBounds.txt
-rw-r--r-- 1 mcc users 107K May 15 18:54 UpperBounds.xml
-rw-r--r-- 1 mcc users 5 May 15 18:50 equiv_col
-rw-r--r-- 1 mcc users 3 May 15 18:50 instance
-rw-r--r-- 1 mcc users 6 May 15 18:50 iscolored
-rw-r--r-- 1 mcc users 4.0M May 15 18:50 model.pnml
=====================================================================
Generated by BenchKit 2-3637
Executing tool itstoolsl
Input is DatabaseWithMutex-PT-20, examination is CTLFireability
Time confinement is 3600 seconds
Memory confinement is 16384 MBytes
Number of cores is 4
Run identifier is r081-blw3-152649948200060
=====================================================================

--------------------
content from stdout:

=== Data for post analysis generated by BenchKit (invocation template)

The expected result is a vector of booleans
BOOL_VECTOR

here is the order used to build the result vector(from text file)
FORMULA_NAME DatabaseWithMutex-PT-20-CTLFireability-00
FORMULA_NAME DatabaseWithMutex-PT-20-CTLFireability-01
FORMULA_NAME DatabaseWithMutex-PT-20-CTLFireability-02
FORMULA_NAME DatabaseWithMutex-PT-20-CTLFireability-03
FORMULA_NAME DatabaseWithMutex-PT-20-CTLFireability-04
FORMULA_NAME DatabaseWithMutex-PT-20-CTLFireability-05
FORMULA_NAME DatabaseWithMutex-PT-20-CTLFireability-06
FORMULA_NAME DatabaseWithMutex-PT-20-CTLFireability-07
FORMULA_NAME DatabaseWithMutex-PT-20-CTLFireability-08
FORMULA_NAME DatabaseWithMutex-PT-20-CTLFireability-09
FORMULA_NAME DatabaseWithMutex-PT-20-CTLFireability-10
FORMULA_NAME DatabaseWithMutex-PT-20-CTLFireability-11
FORMULA_NAME DatabaseWithMutex-PT-20-CTLFireability-12
FORMULA_NAME DatabaseWithMutex-PT-20-CTLFireability-13
FORMULA_NAME DatabaseWithMutex-PT-20-CTLFireability-14
FORMULA_NAME DatabaseWithMutex-PT-20-CTLFireability-15

=== Now, execution of the tool begins

BK_START 1527243836992

Converted graph to binary with : CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.louvain.binaries_1.0.0.201805241334/bin/convert-linux64, -i, /tmp/graph3680540982170568974.txt, -o, /tmp/graph3680540982170568974.bin, -w, /tmp/graph3680540982170568974.weights], workingDir=null]
Built communities with : CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.louvain.binaries_1.0.0.201805241334/bin/louvain-linux64, /tmp/graph3680540982170568974.bin, -l, -1, -v, -w, /tmp/graph3680540982170568974.weights, -q, 0, -e, 0.001], workingDir=null]
Invoking ITS tools like this :CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.201805241334/bin/its-ctl-linux64, --gc-threshold, 2000000, --quiet, -i, /home/mcc/execution/CTLFireability.pnml.gal, -t, CGAL, -ctl, /home/mcc/execution/CTLFireability.ctl], workingDir=/home/mcc/execution]

its-ctl command run as :

/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.201805241334/bin/its-ctl-linux64 --gc-threshold 2000000 --quiet -i /home/mcc/execution/CTLFireability.pnml.gal -t CGAL -ctl /home/mcc/execution/CTLFireability.ctl
No direction supplied, using forward translation only.
Parsed 16 CTL formulae.
built 1240 ordering constraints for composite.
built 80 ordering constraints for composite.
built 80 ordering constraints for composite.
built 80 ordering constraints for composite.
built 80 ordering constraints for composite.
built 80 ordering constraints for composite.
built 80 ordering constraints for composite.
built 80 ordering constraints for composite.
built 80 ordering constraints for composite.
built 80 ordering constraints for composite.
built 420 ordering constraints for composite.
built 420 ordering constraints for composite.
built 420 ordering constraints for composite.
built 420 ordering constraints for composite.
built 420 ordering constraints for composite.
built 420 ordering constraints for composite.
built 420 ordering constraints for composite.
built 420 ordering constraints for composite.
built 420 ordering constraints for composite.
built 420 ordering constraints for composite.
built 420 ordering constraints for composite.
built 420 ordering constraints for composite.
built 420 ordering constraints for composite.
built 420 ordering constraints for composite.
built 420 ordering constraints for composite.
built 80 ordering constraints for composite.
built 420 ordering constraints for composite.
built 420 ordering constraints for composite.
built 420 ordering constraints for composite.
built 420 ordering constraints for composite.
built 420 ordering constraints for composite.
built 80 ordering constraints for composite.
built 80 ordering constraints for composite.
built 80 ordering constraints for composite.
built 80 ordering constraints for composite.
built 80 ordering constraints for composite.
built 80 ordering constraints for composite.
built 80 ordering constraints for composite.
built 80 ordering constraints for composite.
built 80 ordering constraints for composite.
built 80 ordering constraints for composite.
sparsehash FATAL ERROR: failed to allocate 44 groups

BK_STOP 1527244239510

--------------------
content from stderr:

+ export BINDIR=/home/mcc/BenchKit/
+ BINDIR=/home/mcc/BenchKit/
++ pwd
+ export MODEL=/home/mcc/execution
+ MODEL=/home/mcc/execution
+ /home/mcc/BenchKit//runeclipse.sh /home/mcc/execution CTLFireability -its -ltsminpath /home/mcc/BenchKit//lts_install_dir/ -louvain -smt
+ ulimit -s 65536
+ [[ -z '' ]]
+ export LTSMIN_MEM_SIZE=8589934592
+ LTSMIN_MEM_SIZE=8589934592
+ /home/mcc/BenchKit//itstools/its-tools -consoleLog -data /home/mcc/execution/workspace -pnfolder /home/mcc/execution -examination CTLFireability -z3path /home/mcc/BenchKit//z3/bin/z3 -yices2path /home/mcc/BenchKit//yices/bin/yices -its -ltsminpath /home/mcc/BenchKit//lts_install_dir/ -louvain -smt -vmargs -Dosgi.locking=none -Declipse.stateSaveDelayInterval=-1 -Dosgi.configuration.area=/tmp/.eclipse -Xss8m -Xms40m -Xmx8192m -Dfile.encoding=UTF-8 -Dosgi.requiredJavaVersion=1.6
May 25, 2018 10:23:58 AM fr.lip6.move.gal.application.Application start
INFO: Running its-tools with arguments : [-pnfolder, /home/mcc/execution, -examination, CTLFireability, -z3path, /home/mcc/BenchKit//z3/bin/z3, -yices2path, /home/mcc/BenchKit//yices/bin/yices, -its, -ltsminpath, /home/mcc/BenchKit//lts_install_dir/, -louvain, -smt]
May 25, 2018 10:23:58 AM fr.lip6.move.gal.application.MccTranslator transformPNML
INFO: Parsing pnml file : /home/mcc/execution/model.pnml
May 25, 2018 10:23:58 AM fr.lip6.move.gal.nupn.PTNetReader loadFromXML
INFO: Load time of PNML (sax parser for PT used): 320 ms
May 25, 2018 10:23:59 AM fr.lip6.move.gal.pnml.togal.PTGALTransformer handlePage
INFO: Transformed 3260 places.
May 25, 2018 10:23:59 AM fr.lip6.move.gal.pnml.togal.PTGALTransformer handlePage
INFO: Transformed 3200 transitions.
May 25, 2018 10:24:00 AM fr.lip6.move.gal.application.MccTranslator applyOrder
INFO: Applying decomposition
May 25, 2018 10:24:01 AM fr.lip6.move.gal.instantiate.GALRewriter flatten
INFO: Flatten gal took : 788 ms
May 25, 2018 10:24:01 AM fr.lip6.move.gal.instantiate.GALRewriter flatten
INFO: Flatten gal took : 533 ms
Begin: Fri May 25 10:24:03 2018

Computation of communities with the Newman-Girvan Modularity quality function

level 0:
start computation: Fri May 25 10:24:03 2018
network size: 3260 nodes, 40000 links, 6400 weight
quality increased from -0.00104849 to 0.56625
end computation: Fri May 25 10:24:03 2018
level 1:
start computation: Fri May 25 10:24:03 2018
network size: 860 nodes, 20060 links, 6400 weight
quality increased from 0.56625 to 0.734862
end computation: Fri May 25 10:24:03 2018
level 2:
start computation: Fri May 25 10:24:03 2018
network size: 60 nodes, 2420 links, 6400 weight
quality increased from 0.734862 to 0.734862
end computation: Fri May 25 10:24:03 2018
End: Fri May 25 10:24:03 2018
Total duration: 0 sec
0.734862
May 25, 2018 10:24:03 AM fr.lip6.move.gal.instantiate.CompositeBuilder decomposeWithOrder
INFO: Decomposing Gal with order
May 25, 2018 10:24:03 AM fr.lip6.move.gal.instantiate.GALRewriter flatten
INFO: Flatten gal took : 580 ms
May 25, 2018 10:24:03 AM fr.lip6.move.gal.instantiate.CompositeBuilder rewriteArraysToAllowPartition
INFO: Rewriting arrays to variables to allow decomposition.
May 25, 2018 10:24:08 AM fr.lip6.move.gal.instantiate.Instantiator fuseIsomorphicEffects
INFO: Removed a total of 14780 redundant transitions.
May 25, 2018 10:24:08 AM fr.lip6.move.serialization.SerializationUtil systemToFile
INFO: Time to serialize gal into /home/mcc/execution/CTLFireability.pnml.gal : 77 ms
May 25, 2018 10:24:09 AM fr.lip6.move.serialization.SerializationUtil serializePropertiesForITSCTLTools
INFO: Time to serialize properties into /home/mcc/execution/CTLFireability.ctl : 109 ms
ITS-tools command line returned an error code 1

Sequence of Actions to be Executed by the VM

This is useful if one wants to reexecute the tool in the VM from the submitted image disk.

set -x
# this is for BenchKit: configuration of major elements for the test
export BK_INPUT="DatabaseWithMutex-PT-20"
export BK_EXAMINATION="CTLFireability"
export BK_TOOL="itstoolsl"
export BK_RESULT_DIR="/tmp/BK_RESULTS/OUTPUTS"
export BK_TIME_CONFINEMENT="3600"
export BK_MEMORY_CONFINEMENT="16384"

# this is specific to your benchmark or test

export BIN_DIR="$HOME/BenchKit/bin"

# remove the execution directoty if it exists (to avoid increse of .vmdk images)
if [ -d execution ] ; then
rm -rf execution
fi

tar xzf /home/mcc/BenchKit/INPUTS/DatabaseWithMutex-PT-20.tgz
mv DatabaseWithMutex-PT-20 execution
cd execution
pwd
ls -lh

# this is for BenchKit: explicit launching of the test
echo "====================================================================="
echo " Generated by BenchKit 2-3637"
echo " Executing tool itstoolsl"
echo " Input is DatabaseWithMutex-PT-20, examination is CTLFireability"
echo " Time confinement is $BK_TIME_CONFINEMENT seconds"
echo " Memory confinement is 16384 MBytes"
echo " Number of cores is 4"
echo " Run identifier is r081-blw3-152649948200060"
echo "====================================================================="
echo
echo "--------------------"
echo "content from stdout:"
echo
echo "=== Data for post analysis generated by BenchKit (invocation template)"
echo
if [ "CTLFireability" = "UpperBounds" ] ; then
echo "The expected result is a vector of positive values"
echo NUM_VECTOR
elif [ "CTLFireability" != "StateSpace" ] ; then
echo "The expected result is a vector of booleans"
echo BOOL_VECTOR
else
echo "no data necessary for post analysis"
fi
echo
if [ -f "CTLFireability.txt" ] ; then
echo "here is the order used to build the result vector(from text file)"
for x in $(grep Property CTLFireability.txt | cut -d ' ' -f 2 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ -f "CTLFireability.xml" ] ; then # for cunf (txt files deleted;-)
echo echo "here is the order used to build the result vector(from xml file)"
for x in $(grep '' CTLFireability.xml | cut -d '>' -f 2 | cut -d '<' -f 1 | sort -u) ; do
echo "FORMULA_NAME $x"
done
fi
echo
echo "=== Now, execution of the tool begins"
echo
echo -n "BK_START "
date -u +%s%3N
echo
timeout -s 9 $BK_TIME_CONFINEMENT bash -c "/home/mcc/BenchKit/BenchKit_head.sh 2> STDERR ; echo ; echo -n \"BK_STOP \" ; date -u +%s%3N"
if [ $? -eq 137 ] ; then
echo
echo "BK_TIME_CONFINEMENT_REACHED"
fi
echo
echo "--------------------"
echo "content from stderr:"
echo
cat STDERR ;