Execution Chart

We display below the execution chart for this examination (boot time has been removed).

Trace from the execution

Waiting for the VM to be ready (probing ssh)
..................
/home/mcc/execution
total 2.0M
-rw-r--r-- 1 mcc users 58K May 15 18:54 CTLCardinality.txt
-rw-r--r-- 1 mcc users 175K May 15 18:54 CTLCardinality.xml
-rw-r--r-- 1 mcc users 50K May 15 18:54 CTLFireability.txt
-rw-r--r-- 1 mcc users 188K May 15 18:54 CTLFireability.xml
-rw-r--r-- 1 mcc users 4.0K May 15 18:50 GenericPropertiesDefinition.xml
-rw-r--r-- 1 mcc users 6.3K May 15 18:50 GenericPropertiesVerdict.xml
-rw-r--r-- 1 mcc users 23K May 15 18:54 LTLCardinality.txt
-rw-r--r-- 1 mcc users 70K May 15 18:54 LTLCardinality.xml
-rw-r--r-- 1 mcc users 24K May 15 18:54 LTLFireability.txt
-rw-r--r-- 1 mcc users 89K May 15 18:54 LTLFireability.xml
-rw-r--r-- 1 mcc users 53K May 15 18:54 ReachabilityCardinality.txt
-rw-r--r-- 1 mcc users 158K May 15 18:54 ReachabilityCardinality.xml
-rw-r--r-- 1 mcc users 114 May 15 18:54 ReachabilityDeadlock.txt
-rw-r--r-- 1 mcc users 352 May 15 18:54 ReachabilityDeadlock.xml
-rw-r--r-- 1 mcc users 50K May 15 18:54 ReachabilityFireability.txt
-rw-r--r-- 1 mcc users 191K May 15 18:54 ReachabilityFireability.xml
-rw-r--r-- 1 mcc users 11K May 15 18:54 UpperBounds.txt
-rw-r--r-- 1 mcc users 23K May 15 18:54 UpperBounds.xml
-rw-r--r-- 1 mcc users 5 May 15 18:50 equiv_col
-rw-r--r-- 1 mcc users 3 May 15 18:50 instance
-rw-r--r-- 1 mcc users 6 May 15 18:50 iscolored
-rw-r--r-- 1 mcc users 816K May 15 18:50 model.pnml
=====================================================================
Generated by BenchKit 2-3637
Executing tool itstoolsl
Input is DatabaseWithMutex-PT-10, examination is CTLFireability
Time confinement is 3600 seconds
Memory confinement is 16384 MBytes
Number of cores is 4
Run identifier is r081-blw3-152649948200053
=====================================================================

--------------------
content from stdout:

=== Data for post analysis generated by BenchKit (invocation template)

The expected result is a vector of booleans
BOOL_VECTOR

here is the order used to build the result vector(from text file)
FORMULA_NAME DatabaseWithMutex-PT-10-CTLFireability-00
FORMULA_NAME DatabaseWithMutex-PT-10-CTLFireability-01
FORMULA_NAME DatabaseWithMutex-PT-10-CTLFireability-02
FORMULA_NAME DatabaseWithMutex-PT-10-CTLFireability-03
FORMULA_NAME DatabaseWithMutex-PT-10-CTLFireability-04
FORMULA_NAME DatabaseWithMutex-PT-10-CTLFireability-05
FORMULA_NAME DatabaseWithMutex-PT-10-CTLFireability-06
FORMULA_NAME DatabaseWithMutex-PT-10-CTLFireability-07
FORMULA_NAME DatabaseWithMutex-PT-10-CTLFireability-08
FORMULA_NAME DatabaseWithMutex-PT-10-CTLFireability-09
FORMULA_NAME DatabaseWithMutex-PT-10-CTLFireability-10
FORMULA_NAME DatabaseWithMutex-PT-10-CTLFireability-11
FORMULA_NAME DatabaseWithMutex-PT-10-CTLFireability-12
FORMULA_NAME DatabaseWithMutex-PT-10-CTLFireability-13
FORMULA_NAME DatabaseWithMutex-PT-10-CTLFireability-14
FORMULA_NAME DatabaseWithMutex-PT-10-CTLFireability-15

=== Now, execution of the tool begins

BK_START 1527240742235

Converted graph to binary with : CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.louvain.binaries_1.0.0.201805241334/bin/convert-linux64, -i, /tmp/graph3709932557027897364.txt, -o, /tmp/graph3709932557027897364.bin, -w, /tmp/graph3709932557027897364.weights], workingDir=null]
Built communities with : CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.louvain.binaries_1.0.0.201805241334/bin/louvain-linux64, /tmp/graph3709932557027897364.bin, -l, -1, -v, -w, /tmp/graph3709932557027897364.weights, -q, 0, -e, 0.001], workingDir=null]
Invoking ITS tools like this :CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.201805241334/bin/its-ctl-linux64, --gc-threshold, 2000000, --quiet, -i, /home/mcc/execution/CTLFireability.pnml.gal, -t, CGAL, -ctl, /home/mcc/execution/CTLFireability.ctl], workingDir=/home/mcc/execution]

its-ctl command run as :

/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.201805241334/bin/its-ctl-linux64 --gc-threshold 2000000 --quiet -i /home/mcc/execution/CTLFireability.pnml.gal -t CGAL -ctl /home/mcc/execution/CTLFireability.ctl
No direction supplied, using forward translation only.
Parsed 16 CTL formulae.
built 320 ordering constraints for composite.
built 40 ordering constraints for composite.
built 40 ordering constraints for composite.
built 40 ordering constraints for composite.
built 110 ordering constraints for composite.
built 110 ordering constraints for composite.
built 110 ordering constraints for composite.
built 110 ordering constraints for composite.
built 40 ordering constraints for composite.
built 110 ordering constraints for composite.
built 110 ordering constraints for composite.
built 110 ordering constraints for composite.
built 110 ordering constraints for composite.
built 110 ordering constraints for composite.
built 110 ordering constraints for composite.
built 40 ordering constraints for composite.
built 40 ordering constraints for composite.
built 40 ordering constraints for composite.
built 40 ordering constraints for composite.
built 40 ordering constraints for composite.
built 40 ordering constraints for composite.
terminate called after throwing an instance of 'std::bad_alloc'
what(): std::bad_alloc

BK_STOP 1527242790046

--------------------
content from stderr:

+ export BINDIR=/home/mcc/BenchKit/
+ BINDIR=/home/mcc/BenchKit/
++ pwd
+ export MODEL=/home/mcc/execution
+ MODEL=/home/mcc/execution
+ /home/mcc/BenchKit//runeclipse.sh /home/mcc/execution CTLFireability -its -ltsminpath /home/mcc/BenchKit//lts_install_dir/ -louvain -smt
+ ulimit -s 65536
+ [[ -z '' ]]
+ export LTSMIN_MEM_SIZE=8589934592
+ LTSMIN_MEM_SIZE=8589934592
+ /home/mcc/BenchKit//itstools/its-tools -consoleLog -data /home/mcc/execution/workspace -pnfolder /home/mcc/execution -examination CTLFireability -z3path /home/mcc/BenchKit//z3/bin/z3 -yices2path /home/mcc/BenchKit//yices/bin/yices -its -ltsminpath /home/mcc/BenchKit//lts_install_dir/ -louvain -smt -vmargs -Dosgi.locking=none -Declipse.stateSaveDelayInterval=-1 -Dosgi.configuration.area=/tmp/.eclipse -Xss8m -Xms40m -Xmx8192m -Dfile.encoding=UTF-8 -Dosgi.requiredJavaVersion=1.6
May 25, 2018 9:32:23 AM fr.lip6.move.gal.application.Application start
INFO: Running its-tools with arguments : [-pnfolder, /home/mcc/execution, -examination, CTLFireability, -z3path, /home/mcc/BenchKit//z3/bin/z3, -yices2path, /home/mcc/BenchKit//yices/bin/yices, -its, -ltsminpath, /home/mcc/BenchKit//lts_install_dir/, -louvain, -smt]
May 25, 2018 9:32:23 AM fr.lip6.move.gal.application.MccTranslator transformPNML
INFO: Parsing pnml file : /home/mcc/execution/model.pnml
May 25, 2018 9:32:23 AM fr.lip6.move.gal.nupn.PTNetReader loadFromXML
INFO: Load time of PNML (sax parser for PT used): 128 ms
May 25, 2018 9:32:23 AM fr.lip6.move.gal.pnml.togal.PTGALTransformer handlePage
INFO: Transformed 830 places.
May 25, 2018 9:32:24 AM fr.lip6.move.gal.pnml.togal.PTGALTransformer handlePage
INFO: Transformed 800 transitions.
May 25, 2018 9:32:24 AM fr.lip6.move.serialization.SerializationUtil systemToFile
INFO: Time to serialize gal into /home/mcc/execution/model.pnml.img.gal : 34 ms
May 25, 2018 9:32:24 AM fr.lip6.move.gal.application.MccTranslator applyOrder
INFO: Applying decomposition
May 25, 2018 9:32:24 AM fr.lip6.move.gal.instantiate.GALRewriter flatten
INFO: Flatten gal took : 202 ms
May 25, 2018 9:32:24 AM fr.lip6.move.gal.instantiate.GALRewriter flatten
INFO: Flatten gal took : 136 ms
Begin: Fri May 25 09:32:25 2018

Computation of communities with the Newman-Girvan Modularity quality function

level 0:
start computation: Fri May 25 09:32:25 2018
network size: 830 nodes, 6000 links, 1600 weight
quality increased from -0.00251992 to 0.569316
end computation: Fri May 25 09:32:25 2018
level 1:
start computation: Fri May 25 09:32:25 2018
network size: 230 nodes, 3030 links, 1600 weight
quality increased from 0.569316 to 0.719719
end computation: Fri May 25 09:32:25 2018
level 2:
start computation: Fri May 25 09:32:25 2018
network size: 30 nodes, 610 links, 1600 weight
quality increased from 0.719719 to 0.719719
end computation: Fri May 25 09:32:25 2018
End: Fri May 25 09:32:25 2018
Total duration: 0 sec
0.719719
May 25, 2018 9:32:25 AM fr.lip6.move.gal.instantiate.CompositeBuilder decomposeWithOrder
INFO: Decomposing Gal with order
May 25, 2018 9:32:25 AM fr.lip6.move.gal.instantiate.GALRewriter flatten
INFO: Flatten gal took : 107 ms
May 25, 2018 9:32:25 AM fr.lip6.move.gal.instantiate.CompositeBuilder rewriteArraysToAllowPartition
INFO: Rewriting arrays to variables to allow decomposition.
May 25, 2018 9:32:25 AM fr.lip6.move.gal.instantiate.Instantiator fuseIsomorphicEffects
INFO: Removed a total of 1690 redundant transitions.
May 25, 2018 9:32:26 AM fr.lip6.move.serialization.SerializationUtil systemToFile
INFO: Time to serialize gal into /home/mcc/execution/CTLFireability.pnml.gal : 20 ms
May 25, 2018 9:32:26 AM fr.lip6.move.serialization.SerializationUtil serializePropertiesForITSCTLTools
INFO: Time to serialize properties into /home/mcc/execution/CTLFireability.ctl : 24 ms
ITS-tools command line returned an error code 134

Sequence of Actions to be Executed by the VM

This is useful if one wants to reexecute the tool in the VM from the submitted image disk.

set -x
# this is for BenchKit: configuration of major elements for the test
export BK_INPUT="DatabaseWithMutex-PT-10"
export BK_EXAMINATION="CTLFireability"
export BK_TOOL="itstoolsl"
export BK_RESULT_DIR="/tmp/BK_RESULTS/OUTPUTS"
export BK_TIME_CONFINEMENT="3600"
export BK_MEMORY_CONFINEMENT="16384"

# this is specific to your benchmark or test

export BIN_DIR="$HOME/BenchKit/bin"

# remove the execution directoty if it exists (to avoid increse of .vmdk images)
if [ -d execution ] ; then
rm -rf execution
fi

tar xzf /home/mcc/BenchKit/INPUTS/DatabaseWithMutex-PT-10.tgz
mv DatabaseWithMutex-PT-10 execution
cd execution
pwd
ls -lh

# this is for BenchKit: explicit launching of the test
echo "====================================================================="
echo " Generated by BenchKit 2-3637"
echo " Executing tool itstoolsl"
echo " Input is DatabaseWithMutex-PT-10, examination is CTLFireability"
echo " Time confinement is $BK_TIME_CONFINEMENT seconds"
echo " Memory confinement is 16384 MBytes"
echo " Number of cores is 4"
echo " Run identifier is r081-blw3-152649948200053"
echo "====================================================================="
echo
echo "--------------------"
echo "content from stdout:"
echo
echo "=== Data for post analysis generated by BenchKit (invocation template)"
echo
if [ "CTLFireability" = "UpperBounds" ] ; then
echo "The expected result is a vector of positive values"
echo NUM_VECTOR
elif [ "CTLFireability" != "StateSpace" ] ; then
echo "The expected result is a vector of booleans"
echo BOOL_VECTOR
else
echo "no data necessary for post analysis"
fi
echo
if [ -f "CTLFireability.txt" ] ; then
echo "here is the order used to build the result vector(from text file)"
for x in $(grep Property CTLFireability.txt | cut -d ' ' -f 2 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ -f "CTLFireability.xml" ] ; then # for cunf (txt files deleted;-)
echo echo "here is the order used to build the result vector(from xml file)"
for x in $(grep '' CTLFireability.xml | cut -d '>' -f 2 | cut -d '<' -f 1 | sort -u) ; do
echo "FORMULA_NAME $x"
done
fi
echo
echo "=== Now, execution of the tool begins"
echo
echo -n "BK_START "
date -u +%s%3N
echo
timeout -s 9 $BK_TIME_CONFINEMENT bash -c "/home/mcc/BenchKit/BenchKit_head.sh 2> STDERR ; echo ; echo -n \"BK_STOP \" ; date -u +%s%3N"
if [ $? -eq 137 ] ; then
echo
echo "BK_TIME_CONFINEMENT_REACHED"
fi
echo
echo "--------------------"
echo "content from stderr:"
echo
cat STDERR ;