Execution Chart

We display below the execution chart for this examination (boot time has been removed).

Trace from the execution

Waiting for the VM to be ready (probing ssh)
...................
/home/mcc/execution
total 184K
-rw-r--r-- 1 mcc users 3.2K May 15 18:54 CTLCardinality.txt
-rw-r--r-- 1 mcc users 17K May 15 18:54 CTLCardinality.xml
-rw-r--r-- 1 mcc users 3.0K May 15 18:54 CTLFireability.txt
-rw-r--r-- 1 mcc users 19K May 15 18:54 CTLFireability.xml
-rw-r--r-- 1 mcc users 4.0K May 15 18:49 GenericPropertiesDefinition.xml
-rw-r--r-- 1 mcc users 6.2K May 15 18:49 GenericPropertiesVerdict.xml
-rw-r--r-- 1 mcc users 2.4K May 15 18:54 LTLCardinality.txt
-rw-r--r-- 1 mcc users 11K May 15 18:54 LTLCardinality.xml
-rw-r--r-- 1 mcc users 2.1K May 15 18:54 LTLFireability.txt
-rw-r--r-- 1 mcc users 9.3K May 15 18:54 LTLFireability.xml
-rw-r--r-- 1 mcc users 3.8K May 15 18:54 ReachabilityCardinality.txt
-rw-r--r-- 1 mcc users 19K May 15 18:54 ReachabilityCardinality.xml
-rw-r--r-- 1 mcc users 115 May 15 18:54 ReachabilityDeadlock.txt
-rw-r--r-- 1 mcc users 353 May 15 18:54 ReachabilityDeadlock.xml
-rw-r--r-- 1 mcc users 3.6K May 15 18:54 ReachabilityFireability.txt
-rw-r--r-- 1 mcc users 22K May 15 18:54 ReachabilityFireability.xml
-rw-r--r-- 1 mcc users 1.7K May 15 18:54 UpperBounds.txt
-rw-r--r-- 1 mcc users 3.8K May 15 18:54 UpperBounds.xml
-rw-r--r-- 1 mcc users 6 May 15 18:49 equiv_col
-rw-r--r-- 1 mcc users 7 May 15 18:49 instance
-rw-r--r-- 1 mcc users 6 May 15 18:49 iscolored
-rw-r--r-- 1 mcc users 11K May 15 18:49 model.pnml
=====================================================================
Generated by BenchKit 2-3637
Executing tool mcc4mcc-full
Input is CircadianClock-PT-100000, examination is CTLFireability
Time confinement is 3600 seconds
Memory confinement is 16384 MBytes
Number of cores is 4
Run identifier is r034-ebro-152646312700515
=====================================================================

--------------------
content from stdout:

=== Data for post analysis generated by BenchKit (invocation template)

The expected result is a vector of booleans
BOOL_VECTOR

here is the order used to build the result vector(from text file)
FORMULA_NAME CircadianClock-PT-100000-CTLFireability-00
FORMULA_NAME CircadianClock-PT-100000-CTLFireability-01
FORMULA_NAME CircadianClock-PT-100000-CTLFireability-02
FORMULA_NAME CircadianClock-PT-100000-CTLFireability-03
FORMULA_NAME CircadianClock-PT-100000-CTLFireability-04
FORMULA_NAME CircadianClock-PT-100000-CTLFireability-05
FORMULA_NAME CircadianClock-PT-100000-CTLFireability-06
FORMULA_NAME CircadianClock-PT-100000-CTLFireability-07
FORMULA_NAME CircadianClock-PT-100000-CTLFireability-08
FORMULA_NAME CircadianClock-PT-100000-CTLFireability-09
FORMULA_NAME CircadianClock-PT-100000-CTLFireability-10
FORMULA_NAME CircadianClock-PT-100000-CTLFireability-11
FORMULA_NAME CircadianClock-PT-100000-CTLFireability-12
FORMULA_NAME CircadianClock-PT-100000-CTLFireability-13
FORMULA_NAME CircadianClock-PT-100000-CTLFireability-14
FORMULA_NAME CircadianClock-PT-100000-CTLFireability-15

=== Now, execution of the tool begins

BK_START 1527054097487


BK_STOP 1527054293183

--------------------
content from stderr:

Prefix is 65b80f64.
Reading known information in /usr/share/mcc4mcc/65b80f64-known.json.
Reading learned information in /usr/share/mcc4mcc/65b80f64-learned.json.
Reading value translations in /usr/share/mcc4mcc/65b80f64-values.json.
Using directory /home/mcc/execution for input, as it contains a model.pnml file.
Using CircadianClock-PT-100000 as instance name.
Using CircadianClock as model name.
Using algorithm or tool voting-classifier.
Model characteristics are: {'Examination': 'CTLFireability', 'Place/Transition': True, 'Colored': False, 'Relative-Time': 1, 'Relative-Memory': 1, 'Ordinary': True, 'Simple Free Choice': False, 'Extended Free Choice': False, 'State Machine': False, 'Marked Graph': False, 'Connected': True, 'Strongly Connected': True, 'Source Place': False, 'Sink Place': False, 'Source Transition': False, 'Sink Transition': False, 'Loop Free': False, 'Conservative': True, 'Sub-Conservative': True, 'Nested Units': False, 'Safe': None, 'Deadlock': False, 'Reversible': None, 'Quasi Live': True, 'Live': True}.
/usr/local/lib/python3.6/dist-packages/sklearn/preprocessing/label.py:151: DeprecationWarning: The truth value of an empty array is ambiguous. Returning False, but in future this will result in an error. Use `array.size > 0` to check that an array is not empty.
if diff:
Known tools are: [{'Time': 806397, 'Memory': 15942.09, 'Tool': 'lola'}, {'Time': 809335, 'Memory': 15944.04, 'Tool': 'lola'}].
Learned tools are: [{'Tool': 'lola'}].
Learned tool lola is 1.0x far from the best tool lola.
CTLFireability lola CircadianClock-PT-100000...

Time: 3600 - MCC
----- Start make prepare stdout -----
----- Start make prepare stderr -----
===========================================================================================
CircadianClock-PT-100000: translating PT Petri net model.pnml into LoLA format
===========================================================================================
translating PT Petri net complete


checking for too many tokens
===========================================================================================
CircadianClock-PT-100000: translating PT formula CTLFireability into LoLA format
===========================================================================================
translating formula complete
touch formulae;
----- Start make result stderr -----
----- Start make result stdout -----
CTLFireability @ CircadianClock-PT-100000 @ 3540 seconds
make: [verify] Error 134 (ignored)
Makefile:222: recipe for target 'verify' failed
----- Start make result stdout -----
----- Start make result stderr -----
lola: LoLA will run for 3540 seconds at most (--timelimit)
lola: NET
lola: reading net from model.pnml.lola
lola: finished parsing
lola: closed net file model.pnml.lola
lola: 30/65536 symbol table entries, 0 collisions
lola: preprocessing...
lola: finding significant places
lola: 14 places, 16 transitions, 7 significant places
lola: computing forward-conflicting sets
lola: computing back-conflicting sets
lola: 26 transition conflict sets
lola: TASK
lola: reading formula from CircadianClock-PT-100000-CTLFireability.task
lola: (A (G ((E (F (FIREABLE(deg_c))) OR (FIREABLE(transl_a) OR FIREABLE(deg_r) OR FIREABLE(transc_dr))))) AND NOT(A (((FIREABLE(rel_r) OR FIREABLE(bind_r)) U FIREABLE(deg_r))))) : A (G (E (F ((FIREABLE(deg_c) OR (FIREABLE(deg_mr) AND FIREABLE(transc_dr))))))) : ((FIREABLE(transc_da) OR NOT FIREABLE(rel_r)) AND NOT(E (F (A (G (FIREABLE(transc_da))))))) : E (X (E (F (A (G (FIREABLE(deg_mr))))))) : (A (G (E (X (FIREABLE(deg_mr))))) OR FIREABLE(deg_r)) : A (G ((E ((FIREABLE(rel_r) U FIREABLE(deg_mr))) OR A (X ((FIREABLE(transc_dr) OR FIREABLE(transc_dr_a))))))) : ((FIREABLE(transc_dr) OR NOT(A (G ((FIREABLE(transc_dr_a) AND FIREABLE(transc_da_a)))))) AND (E (F (A (G (FIREABLE(bind_a))))) OR ((A (G (FIREABLE(deg_c))) AND (FIREABLE(transc_dr_a) AND FIREABLE(rel_a) AND FIREABLE(deg_c))) AND A ((FIREABLE(transl_a) U FIREABLE(transc_dr_a)))))) : (((E ((FIREABLE(rel_r) U FIREABLE(transl_r))) OR (E (X (FIREABLE(deg_mr))) OR E (X (FIREABLE(deg_r))))) OR ((FIREABLE(transl_r) AND FIREABLE(deg_mr) AND FIREABLE(transc_da)) OR FIREABLE(transc_dr) OR FIREABLE(rel_r))) AND FIREABLE(bind_r)) : ((NOT FIREABLE(transc_dr_a)) AND NOT(NOT(A (X ((FIREABLE(deg_mr) AND FIREABLE(deactive))))))) : E ((FIREABLE(rel_a) U ((FIREABLE(transc_dr_a) AND FIREABLE(rel_r) AND FIREABLE(transc_dr) AND FIREABLE(transc_dr_a)) OR E (X (FIREABLE(transl_r)))))) : E ((A (G (NOT FIREABLE(rel_a))) U (FIREABLE(deg_ma) OR FIREABLE(transc_dr) OR FIREABLE(deactive) OR NOT FIREABLE(transc_da_a)))) : FIREABLE(rel_r) : (NOT((A (X (NOT FIREABLE(rel_a))) AND FIREABLE(transc_dr_a))) AND A (X (NOT(E (F (FIREABLE(transc_da))))))) : E ((A (X (NOT FIREABLE(transc_da_a))) U A ((FIREABLE(transl_a) U FIREABLE(bind_a))))) : ((((() AND E (G (FIREABLE(transc_da)))) AND (FIREABLE(transl_r) OR A (G (FIREABLE(bind_a))))) AND E (X (FIREABLE(transl_a)))) OR FIREABLE(deg_ma)) : FIREABLE(deg_a)
lola: computing a collection of formulas
lola: RUNNING
lola: subprocess 0 will run for 221 seconds at most (--localtimelimit=-1)
lola: ========================================
lola: ...considering subproblem: (A (G ((E (F (FIREABLE(deg_c))) OR (FIREABLE(transl_a) OR FIREABLE(deg_r) OR FIREABLE(transc_dr))))) AND NOT(A (((FIREABLE(rel_r) OR FIREABLE(bind_r)) U FIREABLE(deg_r)))))
lola: ========================================
lola: SUBTASK
lola: checking a Boolean combination of formulas
lola: RUNNING
lola: subprocess 0 will run for 221 seconds at most (--localtimelimit=-1)
lola: ========================================
lola: ...considering subproblem: A (G ((E (F (FIREABLE(deg_c))) OR (FIREABLE(transl_a) OR FIREABLE(deg_r) OR FIREABLE(transc_dr)))))
lola: ========================================
lola: SUBTASK
lola: checking CTL
lola: processed formula: NOT(E(TRUE U (NOT(E(TRUE U FIREABLE(deg_c))) AND (NOT FIREABLE(transl_a) AND NOT FIREABLE(deg_r) AND NOT FIREABLE(transc_dr)))))
lola: processed formula length: 128
lola: 8 rewrites
lola: formula mentions 0 of 14 places; total mentions: 0
lola: closed formula file CircadianClock-PT-100000-CTLFireability.task
lola: STORE
lola: using a bit-perfect encoder (--encoder=bit)
lola: using 28 bytes per marking, with 0 unused bits
lola: using a prefix tree store (--store=prefix)
lola: Using CTL preserving stubborn sets
lola: RUNNING
lola: CTL formula contains 2 significant temporal operators and needs 9 bytes of payload
lola: Ignoring fairness constraints (--fair).
lola: 2880362 markings, 4280377 edges, 3092882503346683904 markings/sec, 0 secs
lola: 5640831 markings, 8440860 edges, 552094 markings/sec, 5 secs
lola: 8374463 markings, 12548882 edges, 546726 markings/sec, 10 secs
lola: 10986582 markings, 16473109 edges, 522424 markings/sec, 15 secs
lola: 13595561 markings, 20391053 edges, 521796 markings/sec, 20 secs
lola: 16278468 markings, 24378549 edges, 536581 markings/sec, 25 secs
lola: 18817981 markings, 28218076 edges, 507903 markings/sec, 30 secs
lola: 21392855 markings, 32085601 edges, 514975 markings/sec, 35 secs
lola: 23887559 markings, 35787678 edges, 498941 markings/sec, 40 secs
lola: 26405948 markings, 39606081 edges, 503678 markings/sec, 45 secs
lola: 29050272 markings, 43550418 edges, 528865 markings/sec, 50 secs
lola: 31559209 markings, 47318260 edges, 501787 markings/sec, 55 secs
lola: 34091079 markings, 51091250 edges, 506374 markings/sec, 60 secs
lola: 36514755 markings, 54729326 edges, 484735 markings/sec, 65 secs
lola: 38921163 markings, 58342130 edges, 481282 markings/sec, 70 secs
lola: 41381301 markings, 62062394 edges, 492028 markings/sec, 75 secs
lola: 43783663 markings, 65667107 edges, 480472 markings/sec, 80 secs
lola: 46171083 markings, 69241934 edges, 477484 markings/sec, 85 secs
lola: 48524052 markings, 72747859 edges, 470594 markings/sec, 90 secs
lola: 50778469 markings, 76156684 edges, 450883 markings/sec, 95 secs
lola: 53450873 markings, 80151140 edges, 534481 markings/sec, 100 secs
lola: 56036421 markings, 84036702 edges, 517110 markings/sec, 105 secs
lola: 58564841 markings, 87829387 edges, 505684 markings/sec, 110 secs
lola: 61030131 markings, 91530436 edges, 493058 markings/sec, 115 secs
lola: 63396018 markings, 95091718 edges, 473177 markings/sec, 120 secs
lola: 65922591 markings, 98844852 edges, 505315 markings/sec, 125 secs
lola: 68341016 markings, 102481690 edges, 483685 markings/sec, 130 secs
lola: 70697287 markings, 105997641 edges, 471254 markings/sec, 135 secs
lola: 73072312 markings, 109572678 edges, 475005 markings/sec, 140 secs
lola: 75374365 markings, 113048353 edges, 460411 markings/sec, 145 secs
lola: 77755812 markings, 116611235 edges, 476289 markings/sec, 150 secs
lola: 80203314 markings, 120303716 edges, 489500 markings/sec, 155 secs
lola: 82567317 markings, 123834221 edges, 472801 markings/sec, 160 secs
lola: 84933178 markings, 127365931 edges, 473172 markings/sec, 165 secs
lola: 87195478 markings, 130790520 edges, 452460 markings/sec, 170 secs
lola: 89387717 markings, 134074987 edges, 438448 markings/sec, 175 secs
lola: 91781900 markings, 137663341 edges, 478837 markings/sec, 180 secs
lola: Child process aborted or communication problem between parent and child process
terminate called after throwing an instance of 'std::runtime_error'
what(): parse error at position 1: unexpected character, last read: '\ufffd'
lola: Child process aborted or communication problem between parent and child process
terminate called after throwing an instance of 'std::runtime_error'
what(): parse error at position 1: unexpected character, last read: '\ufffd'
Aborted (core dumped)
FORMULA CircadianClock-PT-100000-CTLFireability-0 CANNOT_COMPUTE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS TOPOLOGICAL USE_NUPN
FORMULA CircadianClock-PT-100000-CTLFireability-1 CANNOT_COMPUTE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS TOPOLOGICAL USE_NUPN
FORMULA CircadianClock-PT-100000-CTLFireability-2 CANNOT_COMPUTE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS TOPOLOGICAL USE_NUPN
FORMULA CircadianClock-PT-100000-CTLFireability-3 CANNOT_COMPUTE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS TOPOLOGICAL USE_NUPN
FORMULA CircadianClock-PT-100000-CTLFireability-4 CANNOT_COMPUTE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS TOPOLOGICAL USE_NUPN
FORMULA CircadianClock-PT-100000-CTLFireability-5 CANNOT_COMPUTE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS TOPOLOGICAL USE_NUPN
FORMULA CircadianClock-PT-100000-CTLFireability-6 CANNOT_COMPUTE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS TOPOLOGICAL USE_NUPN
FORMULA CircadianClock-PT-100000-CTLFireability-7 CANNOT_COMPUTE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS TOPOLOGICAL USE_NUPN
FORMULA CircadianClock-PT-100000-CTLFireability-8 CANNOT_COMPUTE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS TOPOLOGICAL USE_NUPN
FORMULA CircadianClock-PT-100000-CTLFireability-9 CANNOT_COMPUTE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS TOPOLOGICAL USE_NUPN
FORMULA CircadianClock-PT-100000-CTLFireability-10 CANNOT_COMPUTE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS TOPOLOGICAL USE_NUPN
FORMULA CircadianClock-PT-100000-CTLFireability-11 CANNOT_COMPUTE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS TOPOLOGICAL USE_NUPN
FORMULA CircadianClock-PT-100000-CTLFireability-12 CANNOT_COMPUTE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS TOPOLOGICAL USE_NUPN
FORMULA CircadianClock-PT-100000-CTLFireability-13 CANNOT_COMPUTE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS TOPOLOGICAL USE_NUPN
FORMULA CircadianClock-PT-100000-CTLFireability-14 CANNOT_COMPUTE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS TOPOLOGICAL USE_NUPN
FORMULA CircadianClock-PT-100000-CTLFireability-15 CANNOT_COMPUTE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS TOPOLOGICAL USE_NUPN
----- Kill lola and sara stderr -----
----- Kill lola and sara stdout -----
----- Finished stdout -----
----- Finished stderr -----

Sequence of Actions to be Executed by the VM

This is useful if one wants to reexecute the tool in the VM from the submitted image disk.

set -x
# this is for BenchKit: configuration of major elements for the test
export BK_INPUT="CircadianClock-PT-100000"
export BK_EXAMINATION="CTLFireability"
export BK_TOOL="mcc4mcc-full"
export BK_RESULT_DIR="/tmp/BK_RESULTS/OUTPUTS"
export BK_TIME_CONFINEMENT="3600"
export BK_MEMORY_CONFINEMENT="16384"

# this is specific to your benchmark or test

export BIN_DIR="$HOME/BenchKit/bin"

# remove the execution directoty if it exists (to avoid increse of .vmdk images)
if [ -d execution ] ; then
rm -rf execution
fi

tar xzf /home/mcc/BenchKit/INPUTS/CircadianClock-PT-100000.tgz
mv CircadianClock-PT-100000 execution
cd execution
pwd
ls -lh

# this is for BenchKit: explicit launching of the test
echo "====================================================================="
echo " Generated by BenchKit 2-3637"
echo " Executing tool mcc4mcc-full"
echo " Input is CircadianClock-PT-100000, examination is CTLFireability"
echo " Time confinement is $BK_TIME_CONFINEMENT seconds"
echo " Memory confinement is 16384 MBytes"
echo " Number of cores is 4"
echo " Run identifier is r034-ebro-152646312700515"
echo "====================================================================="
echo
echo "--------------------"
echo "content from stdout:"
echo
echo "=== Data for post analysis generated by BenchKit (invocation template)"
echo
if [ "CTLFireability" = "UpperBounds" ] ; then
echo "The expected result is a vector of positive values"
echo NUM_VECTOR
elif [ "CTLFireability" != "StateSpace" ] ; then
echo "The expected result is a vector of booleans"
echo BOOL_VECTOR
else
echo "no data necessary for post analysis"
fi
echo
if [ -f "CTLFireability.txt" ] ; then
echo "here is the order used to build the result vector(from text file)"
for x in $(grep Property CTLFireability.txt | cut -d ' ' -f 2 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ -f "CTLFireability.xml" ] ; then # for cunf (txt files deleted;-)
echo echo "here is the order used to build the result vector(from xml file)"
for x in $(grep '' CTLFireability.xml | cut -d '>' -f 2 | cut -d '<' -f 1 | sort -u) ; do
echo "FORMULA_NAME $x"
done
fi
echo
echo "=== Now, execution of the tool begins"
echo
echo -n "BK_START "
date -u +%s%3N
echo
timeout -s 9 $BK_TIME_CONFINEMENT bash -c "/home/mcc/BenchKit/BenchKit_head.sh 2> STDERR ; echo ; echo -n \"BK_STOP \" ; date -u +%s%3N"
if [ $? -eq 137 ] ; then
echo
echo "BK_TIME_CONFINEMENT_REACHED"
fi
echo
echo "--------------------"
echo "content from stderr:"
echo
cat STDERR ;