Execution Chart

We display below the execution chart for this examination (boot time has been removed).

Trace from the execution

Waiting for the VM to be ready (probing ssh)
................
/home/mcc/execution
total 852K
-rw-r--r-- 1 mcc users 4.5K May 30 21:28 CTLCardinality.txt
-rw-r--r-- 1 mcc users 23K May 30 21:28 CTLCardinality.xml
-rw-r--r-- 1 mcc users 7.3K May 29 15:19 CTLFireability.txt
-rw-r--r-- 1 mcc users 19K May 29 15:19 CTLFireability.xml
-rw-r--r-- 1 mcc users 2.8K May 28 09:51 LTLCardinality.txt
-rw-r--r-- 1 mcc users 12K May 28 09:51 LTLCardinality.xml
-rw-r--r-- 1 mcc users 3.7K May 28 08:05 LTLFireability.txt
-rw-r--r-- 1 mcc users 11K May 28 08:05 LTLFireability.xml
-rw-r--r-- 1 mcc users 1 May 24 11:17 NewModel
-rw-r--r-- 1 mcc users 4.5K May 28 06:26 ReachabilityCardinality.txt
-rw-r--r-- 1 mcc users 20K May 28 06:26 ReachabilityCardinality.xml
-rw-r--r-- 1 mcc users 104 May 26 06:29 ReachabilityDeadlock.txt
-rw-r--r-- 1 mcc users 342 May 26 06:29 ReachabilityDeadlock.xml
-rw-r--r-- 1 mcc users 7.0K May 27 03:51 ReachabilityFireability.txt
-rw-r--r-- 1 mcc users 18K May 27 03:51 ReachabilityFireability.xml
-rw-r--r-- 1 mcc users 1.7K May 28 07:31 UpperBounds.txt
-rw-r--r-- 1 mcc users 3.7K May 28 07:31 UpperBounds.xml
-rw-r--r-- 1 mcc users 6 May 24 11:17 equiv_col
-rw-r--r-- 1 mcc users 6 May 24 11:17 instance
-rw-r--r-- 1 mcc users 6 May 24 11:17 iscolored
-rw------- 1 mcc users 672K May 24 11:17 model.pnml
=====================================================================
Generated by BenchKit 2-3637
Executing tool itstoolsl
Input is EGFr-PT-10420, examination is CTLCardinality
Time confinement is 3600 seconds
Memory confinement is 16384 MBytes
Number of cores is 4
Run identifier is r285-csrt-152749176000264
=====================================================================

--------------------
content from stdout:

=== Data for post analysis generated by BenchKit (invocation template)

The expected result is a vector of booleans
BOOL_VECTOR

here is the order used to build the result vector(from text file)
FORMULA_NAME EGFr-PT-10420-CTLCardinality-00
FORMULA_NAME EGFr-PT-10420-CTLCardinality-01
FORMULA_NAME EGFr-PT-10420-CTLCardinality-02
FORMULA_NAME EGFr-PT-10420-CTLCardinality-03
FORMULA_NAME EGFr-PT-10420-CTLCardinality-04
FORMULA_NAME EGFr-PT-10420-CTLCardinality-05
FORMULA_NAME EGFr-PT-10420-CTLCardinality-06
FORMULA_NAME EGFr-PT-10420-CTLCardinality-07
FORMULA_NAME EGFr-PT-10420-CTLCardinality-08
FORMULA_NAME EGFr-PT-10420-CTLCardinality-09
FORMULA_NAME EGFr-PT-10420-CTLCardinality-10
FORMULA_NAME EGFr-PT-10420-CTLCardinality-11
FORMULA_NAME EGFr-PT-10420-CTLCardinality-12
FORMULA_NAME EGFr-PT-10420-CTLCardinality-13
FORMULA_NAME EGFr-PT-10420-CTLCardinality-14
FORMULA_NAME EGFr-PT-10420-CTLCardinality-15

=== Now, execution of the tool begins

BK_START 1527990677684

Invoking ITS tools like this :CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.201805241334/bin/its-ctl-linux64, --gc-threshold, 2000000, --quiet, -i, /home/mcc/execution/CTLCardinality.pnml.gal, -t, CGAL, -ctl, /home/mcc/execution/CTLCardinality.ctl], workingDir=/home/mcc/execution]

its-ctl command run as :

/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.201805241334/bin/its-ctl-linux64 --gc-threshold 2000000 --quiet -i /home/mcc/execution/CTLCardinality.pnml.gal -t CGAL -ctl /home/mcc/execution/CTLCardinality.ctl
No direction supplied, using forward translation only.
Parsed 16 CTL formulae.
Model ,|S| ,Time ,Mem(kb) ,fin. SDD ,fin. DDD ,peak SDD ,peak DDD ,SDD Hom ,SDD cache peak ,DDD Hom ,DDD cachepeak ,SHom cache
reachable,2.70216e+16,1.41929,45596,2,405,5,248526,6,0,766,201279,0


Converting to forward existential form...Done !
original formula: EF((AX((mkk4_equals_1>=1)) * (((mekk4_equals_1<=mkk3_equals_1)&&(dag_equals_0<=shp1d_equals_0))&&(!(ccbl_equals_0>=0)))))
=> equivalent forward existential formula: [((FwdU(Init,TRUE) * (((mekk4_equals_1<=mkk3_equals_1)&&(dag_equals_0<=shp1d_equals_0))&&(!(ccbl_equals_0>=0)))) * !(EX(!((mkk4_equals_1>=1)))))] != FALSE
Reverse transition relation is NOT exact ! Due to transitions erbb11_equals_0_to_erbb11_equals_1_when_erbb1_equals_1_and_hbegf_equals_1_and_shp1d_equals_0, erbb11_equals_1_to_erbb11_equals_0_when_shp1d_equals_1, shp1_equals_0_to_shp1_equals_1_when_erbb11_equals_1, shp1_equals_1_to_shp1_equals_0_when_erbb11_equals_0, shp1d_equals_0_to_shp1d_equals_1_when_shp1_equals_1, shp1d_equals_1_to_shp1d_equals_0_when_shp1_equals_0, Intersection with reachable at each step enabled. (destroyed/reverse/intersect/total) :65/133/6/204
(forward)formula 0,0,1.59907,45596,1,0,292,248526,360,143,4227,201279,350
FORMULA EGFr-PT-10420-CTLCardinality-00 FALSE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL USE_NUPN
Formula is FALSE !

***************************************

original formula: (TRUE * EG(((rac_cdc42_equals_0>=2)||(ip3_equals_1<=stat5_equals_1))))
=> equivalent forward existential formula: [FwdG((Init * TRUE),((rac_cdc42_equals_0>=2)||(ip3_equals_1<=stat5_equals_1)))] != FALSE
Hit Full ! (commute/partial/dont) 191/0/12
(forward)formula 1,1,2.99951,71280,1,0,294,412255,370,145,4575,359093,356
FORMULA EGFr-PT-10420-CTLCardinality-01 TRUE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL USE_NUPN
Formula is TRUE !

***************************************

original formula: AG(!(EX((mekk4_equals_0>=3))))
=> equivalent forward existential formula: [(EY(FwdU(Init,TRUE)) * (mekk4_equals_0>=3))] = FALSE
(forward)formula 2,1,2.99977,71280,1,0,294,412255,371,145,4576,359093,356
FORMULA EGFr-PT-10420-CTLCardinality-02 TRUE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL USE_NUPN
Formula is TRUE !

***************************************

original formula: (FALSE * FALSE)
=> equivalent forward existential formula: [(Init * (FALSE * FALSE))] != FALSE
(forward)formula 3,0,2.99981,71280,1,0,294,412255,371,145,4576,359093,356
FORMULA EGFr-PT-10420-CTLCardinality-03 FALSE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL USE_NUPN
Formula is FALSE !

***************************************

original formula: AX(!(EF((raf1_equals_1>=3))))
=> equivalent forward existential formula: [(FwdU(EY(Init),TRUE) * (raf1_equals_1>=3))] = FALSE
(forward)formula 4,1,3.00011,71544,1,0,294,412255,372,145,4577,359093,356
FORMULA EGFr-PT-10420-CTLCardinality-04 TRUE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL USE_NUPN
Formula is TRUE !

***************************************

original formula: (E((rheb_equals_1>=2) U ((ccbl_equals_1>=1)&&(rab5a_equals_1<=1))) + EX(AF((sos1_equals_1>=2))))
=> equivalent forward existential formula: ([(FwdU(Init,(rheb_equals_1>=2)) * ((ccbl_equals_1>=1)&&(rab5a_equals_1<=1)))] != FALSE + [(EY(Init) * !(EG(!((sos1_equals_1>=2)))))] != FALSE)
Hit Full ! (commute/partial/dont) 201/0/2
(forward)formula 5,0,3.01803,72072,1,0,297,413976,386,148,4596,364512,366
FORMULA EGFr-PT-10420-CTLCardinality-05 FALSE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL USE_NUPN
Formula is FALSE !

***************************************

original formula: EF(!(((!(rac_cdc42_equals_1>=1))||((erk12_equals_0>=2)||(jnk_equals_0<=1)))))
=> equivalent forward existential formula: [(FwdU(Init,TRUE) * !(((!(rac_cdc42_equals_1>=1))||((erk12_equals_0>=2)||(jnk_equals_0<=1)))))] != FALSE
(forward)formula 6,0,3.01858,72072,1,0,297,413976,388,148,4602,364512,366
FORMULA EGFr-PT-10420-CTLCardinality-06 FALSE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL USE_NUPN
Formula is FALSE !

***************************************

original formula: ((erk12_equals_1<=mtor_rap_equals_1) * ((EX((pi34p2_equals_0<=mekk1_equals_0)) + AX((rasgap_equals_0>=2))) * EF(((raf1_equals_1<=0)&&(p90rsk_equals_0>=2)))))
=> equivalent forward existential formula: ([(Init * !((erk12_equals_1<=mtor_rap_equals_1)))] = FALSE * ([(EY((Init * !(EX((pi34p2_equals_0<=mekk1_equals_0))))) * !((rasgap_equals_0>=2)))] = FALSE * [(Init * !(E(TRUE U ((raf1_equals_1<=0)&&(p90rsk_equals_0>=2)))))] = FALSE))
(forward)formula 7,0,3.01988,72336,1,0,297,413976,389,149,4605,364645,367
FORMULA EGFr-PT-10420-CTLCardinality-07 FALSE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL USE_NUPN
Formula is FALSE !

BK_TIME_CONFINEMENT_REACHED

--------------------
content from stderr:

+ export BINDIR=/home/mcc/BenchKit/
+ BINDIR=/home/mcc/BenchKit/
++ pwd
+ export MODEL=/home/mcc/execution
+ MODEL=/home/mcc/execution
+ /home/mcc/BenchKit//runeclipse.sh /home/mcc/execution CTLCardinality -its -ltsminpath /home/mcc/BenchKit//lts_install_dir/ -louvain -smt
+ ulimit -s 65536
+ [[ -z '' ]]
+ export LTSMIN_MEM_SIZE=8589934592
+ LTSMIN_MEM_SIZE=8589934592
+ /home/mcc/BenchKit//itstools/its-tools -consoleLog -data /home/mcc/execution/workspace -pnfolder /home/mcc/execution -examination CTLCardinality -z3path /home/mcc/BenchKit//z3/bin/z3 -yices2path /home/mcc/BenchKit//yices/bin/yices -its -ltsminpath /home/mcc/BenchKit//lts_install_dir/ -louvain -smt -vmargs -Dosgi.locking=none -Declipse.stateSaveDelayInterval=-1 -Dosgi.configuration.area=/tmp/.eclipse -Xss8m -Xms40m -Xmx8192m -Dfile.encoding=UTF-8 -Dosgi.requiredJavaVersion=1.6
Jun 03, 2018 1:51:19 AM fr.lip6.move.gal.application.Application start
INFO: Running its-tools with arguments : [-pnfolder, /home/mcc/execution, -examination, CTLCardinality, -z3path, /home/mcc/BenchKit//z3/bin/z3, -yices2path, /home/mcc/BenchKit//yices/bin/yices, -its, -ltsminpath, /home/mcc/BenchKit//lts_install_dir/, -louvain, -smt]
Jun 03, 2018 1:51:19 AM fr.lip6.move.gal.application.MccTranslator transformPNML
INFO: Parsing pnml file : /home/mcc/execution/model.pnml
Jun 03, 2018 1:51:20 AM fr.lip6.move.gal.nupn.PTNetReader loadFromXML
INFO: Load time of PNML (sax parser for PT used): 131 ms
Jun 03, 2018 1:51:20 AM fr.lip6.move.gal.pnml.togal.PTGALTransformer handlePage
INFO: Transformed 208 places.
Jun 03, 2018 1:51:20 AM fr.lip6.move.gal.pnml.togal.PTGALTransformer handlePage
INFO: Transformed 378 transitions.
Jun 03, 2018 1:51:20 AM fr.lip6.move.serialization.SerializationUtil systemToFile
INFO: Time to serialize gal into /home/mcc/execution/model.pnml.img.gal : 33 ms
Jun 03, 2018 1:51:20 AM fr.lip6.move.gal.instantiate.DomainAnalyzer computeVariableDomains
INFO: Found a total of 56 fixed domain variables (out of 208 variables) in GAL type EGFr_PT_10420
Jun 03, 2018 1:51:20 AM fr.lip6.move.gal.instantiate.Simplifier printConstantVars
INFO: Found a total of 56 constant array cells/variables (out of 208 variables) in type EGFr_PT_10420
Jun 03, 2018 1:51:20 AM fr.lip6.move.gal.instantiate.Simplifier printConstantVars
INFO: erbb3_equals_0,ship2_equals_0,pp2a_equals_1,mtorr_equals_1,csrc_equals_1,hbegf_equals_1,mkp_equals_1,erbb4_equals_0,nrg2a_equals_0,nrg1b_equals_1,epr_equals_0,epr_equals_1,erbb3_equals_1,eps8r_equals_0,erbb1_equals_0,ship2_equals_1,pi3kr_equals_1,hbegf_equals_0,btc_equals_0,pdk1_equals_1,csrc_equals_0,bir_equals_0,nrg2b_equals_0,nrg2a_equals_1,pten_equals_1,erbb2_equals_1,nrg3_equals_0,pp2b_equals_0,pdk1_equals_0,pp2a_equals_0,bir_equals_1,nrg3_equals_1,tgfa_equals_1,nrg1b_equals_0,nrg1a_equals_0,pp2b_equals_1,nrg1a_equals_1,sos1r_equals_0,egf_equals_1,erbb4_equals_1,egf_equals_0,pten_equals_0,nrg4_equals_1,erbb1_equals_1,sos1r_equals_1,erbb2_equals_0,btc_equals_1,eps8r_equals_1,mkp_equals_0,ar_equals_0,pi3kr_equals_0,mtorr_equals_0,nrg4_equals_0,nrg2b_equals_1,tgfa_equals_0,ar_equals_1,
Jun 03, 2018 1:51:20 AM fr.lip6.move.gal.instantiate.Simplifier simplifyConstantVariables
INFO: Removed 56 constant variables :erbb3_equals_0=0, ship2_equals_0=1, pp2a_equals_1=0, mtorr_equals_1=0, csrc_equals_1=0, hbegf_equals_1=1, mkp_equals_1=0, erbb4_equals_0=0, nrg2a_equals_0=0, nrg1b_equals_1=1, epr_equals_0=0, epr_equals_1=1, erbb3_equals_1=1, eps8r_equals_0=1, erbb1_equals_0=0, ship2_equals_1=0, pi3kr_equals_1=1, hbegf_equals_0=0, btc_equals_0=0, pdk1_equals_1=1, csrc_equals_0=1, bir_equals_0=0, nrg2b_equals_0=0, nrg2a_equals_1=1, pten_equals_1=0, erbb2_equals_1=1, nrg3_equals_0=0, pp2b_equals_0=1, pdk1_equals_0=0, pp2a_equals_0=1, bir_equals_1=1, nrg3_equals_1=1, tgfa_equals_1=1, nrg1b_equals_0=0, nrg1a_equals_0=0, pp2b_equals_1=0, nrg1a_equals_1=1, sos1r_equals_0=1, egf_equals_1=1, erbb4_equals_1=1, egf_equals_0=0, pten_equals_0=1, nrg4_equals_1=1, erbb1_equals_1=1, sos1r_equals_1=0, erbb2_equals_0=0, btc_equals_1=1, eps8r_equals_1=0, mkp_equals_0=1, ar_equals_0=0, pi3kr_equals_0=0, mtorr_equals_0=1, nrg4_equals_0=0, nrg2b_equals_1=1, tgfa_equals_0=0, ar_equals_1=1
Jun 03, 2018 1:51:20 AM fr.lip6.move.gal.instantiate.Simplifier simplifyConstantVariables
INFO: Simplified 942 expressions due to constant valuations.
Jun 03, 2018 1:51:20 AM fr.lip6.move.gal.instantiate.Simplifier simplifyFalseTransitions
INFO: Removed 174 false transitions.
Jun 03, 2018 1:51:20 AM fr.lip6.move.gal.instantiate.GALRewriter flatten
INFO: Flatten gal took : 222 ms
Jun 03, 2018 1:51:20 AM fr.lip6.move.serialization.SerializationUtil systemToFile
INFO: Time to serialize gal into /home/mcc/execution/CTLCardinality.pnml.gal : 8 ms
Jun 03, 2018 1:51:20 AM fr.lip6.move.serialization.SerializationUtil serializePropertiesForITSCTLTools
INFO: Time to serialize properties into /home/mcc/execution/CTLCardinality.ctl : 2 ms

Sequence of Actions to be Executed by the VM

This is useful if one wants to reexecute the tool in the VM from the submitted image disk.

set -x
# this is for BenchKit: configuration of major elements for the test
export BK_INPUT="EGFr-PT-10420"
export BK_EXAMINATION="CTLCardinality"
export BK_TOOL="itstoolsl"
export BK_RESULT_DIR="/tmp/BK_RESULTS/OUTPUTS"
export BK_TIME_CONFINEMENT="3600"
export BK_MEMORY_CONFINEMENT="16384"

# this is specific to your benchmark or test

export BIN_DIR="$HOME/BenchKit/bin"

# remove the execution directoty if it exists (to avoid increse of .vmdk images)
if [ -d execution ] ; then
rm -rf execution
fi

tar xzf /home/mcc/BenchKit/INPUTS/EGFr-PT-10420.tgz
mv EGFr-PT-10420 execution
cd execution
pwd
ls -lh

# this is for BenchKit: explicit launching of the test
echo "====================================================================="
echo " Generated by BenchKit 2-3637"
echo " Executing tool itstoolsl"
echo " Input is EGFr-PT-10420, examination is CTLCardinality"
echo " Time confinement is $BK_TIME_CONFINEMENT seconds"
echo " Memory confinement is 16384 MBytes"
echo " Number of cores is 4"
echo " Run identifier is r285-csrt-152749176000264"
echo "====================================================================="
echo
echo "--------------------"
echo "content from stdout:"
echo
echo "=== Data for post analysis generated by BenchKit (invocation template)"
echo
if [ "CTLCardinality" = "UpperBounds" ] ; then
echo "The expected result is a vector of positive values"
echo NUM_VECTOR
elif [ "CTLCardinality" != "StateSpace" ] ; then
echo "The expected result is a vector of booleans"
echo BOOL_VECTOR
else
echo "no data necessary for post analysis"
fi
echo
if [ -f "CTLCardinality.txt" ] ; then
echo "here is the order used to build the result vector(from text file)"
for x in $(grep Property CTLCardinality.txt | cut -d ' ' -f 2 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ -f "CTLCardinality.xml" ] ; then # for cunf (txt files deleted;-)
echo echo "here is the order used to build the result vector(from xml file)"
for x in $(grep '' CTLCardinality.xml | cut -d '>' -f 2 | cut -d '<' -f 1 | sort -u) ; do
echo "FORMULA_NAME $x"
done
fi
echo
echo "=== Now, execution of the tool begins"
echo
echo -n "BK_START "
date -u +%s%3N
echo
timeout -s 9 $BK_TIME_CONFINEMENT bash -c "/home/mcc/BenchKit/BenchKit_head.sh 2> STDERR ; echo ; echo -n \"BK_STOP \" ; date -u +%s%3N"
if [ $? -eq 137 ] ; then
echo
echo "BK_TIME_CONFINEMENT_REACHED"
fi
echo
echo "--------------------"
echo "content from stderr:"
echo
cat STDERR ;