Execution Chart

We display below the execution chart for this examination (boot time has been removed).

Trace from the execution

Waiting for the VM to be ready (probing ssh)
............................................................................................................
/home/mcc/execution
total 1.9M
-rw-r--r-- 1 mcc users 2.8K May 30 21:16 CTLCardinality.txt
-rw-r--r-- 1 mcc users 14K May 30 21:16 CTLCardinality.xml
-rw-r--r-- 1 mcc users 2.4K May 29 15:09 CTLFireability.txt
-rw-r--r-- 1 mcc users 15K May 29 15:09 CTLFireability.xml
-rw-r--r-- 1 mcc users 4.0K May 24 11:17 GenericPropertiesDefinition.xml
-rw-r--r-- 1 mcc users 5.8K May 24 11:17 GenericPropertiesVerdict.xml
-rw-r--r-- 1 mcc users 2.5K May 28 09:49 LTLCardinality.txt
-rw-r--r-- 1 mcc users 11K May 28 09:49 LTLCardinality.xml
-rw-r--r-- 1 mcc users 2.0K May 28 08:04 LTLFireability.txt
-rw-r--r-- 1 mcc users 9.1K May 28 08:04 LTLFireability.xml
-rw-r--r-- 1 mcc users 1 May 24 11:17 NewModel
-rw-r--r-- 1 mcc users 3.7K May 28 06:20 ReachabilityCardinality.txt
-rw-r--r-- 1 mcc users 18K May 28 06:20 ReachabilityCardinality.xml
-rw-r--r-- 1 mcc users 112 May 26 06:29 ReachabilityDeadlock.txt
-rw-r--r-- 1 mcc users 350 May 26 06:29 ReachabilityDeadlock.xml
-rw-r--r-- 1 mcc users 2.7K May 27 03:45 ReachabilityFireability.txt
-rw-r--r-- 1 mcc users 15K May 27 03:45 ReachabilityFireability.xml
-rw-r--r-- 1 mcc users 1.7K May 28 07:31 UpperBounds.txt
-rw-r--r-- 1 mcc users 3.7K May 28 07:31 UpperBounds.xml
-rw-r--r-- 1 mcc users 6 May 24 11:17 equiv_col
-rw-r--r-- 1 mcc users 4 May 24 11:17 instance
-rw-r--r-- 1 mcc users 6 May 24 11:17 iscolored
-rw-r--r-- 1 mcc users 1.8M May 24 11:17 model.pnml
=====================================================================
Generated by BenchKit 2-3637
Executing tool itstoolsl
Input is DoubleExponent-PT-100, examination is UpperBounds
Time confinement is 3600 seconds
Memory confinement is 16384 MBytes
Number of cores is 4
Run identifier is r285-csrt-152749176000236
=====================================================================

--------------------
content from stdout:

=== Data for post analysis generated by BenchKit (invocation template)

The expected result is a vector of positive values
NUM_VECTOR

here is the order used to build the result vector(from text file)
FORMULA_NAME DoubleExponent-PT-100-UpperBounds-00
FORMULA_NAME DoubleExponent-PT-100-UpperBounds-01
FORMULA_NAME DoubleExponent-PT-100-UpperBounds-02
FORMULA_NAME DoubleExponent-PT-100-UpperBounds-03
FORMULA_NAME DoubleExponent-PT-100-UpperBounds-04
FORMULA_NAME DoubleExponent-PT-100-UpperBounds-05
FORMULA_NAME DoubleExponent-PT-100-UpperBounds-06
FORMULA_NAME DoubleExponent-PT-100-UpperBounds-07
FORMULA_NAME DoubleExponent-PT-100-UpperBounds-08
FORMULA_NAME DoubleExponent-PT-100-UpperBounds-09
FORMULA_NAME DoubleExponent-PT-100-UpperBounds-10
FORMULA_NAME DoubleExponent-PT-100-UpperBounds-11
FORMULA_NAME DoubleExponent-PT-100-UpperBounds-12
FORMULA_NAME DoubleExponent-PT-100-UpperBounds-13
FORMULA_NAME DoubleExponent-PT-100-UpperBounds-14
FORMULA_NAME DoubleExponent-PT-100-UpperBounds-15

=== Now, execution of the tool begins

BK_START 1527988732162

Converted graph to binary with : CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.louvain.binaries_1.0.0.201805241334/bin/convert-linux64, -i, /tmp/graph4697664755187376039.txt, -o, /tmp/graph4697664755187376039.bin, -w, /tmp/graph4697664755187376039.weights], workingDir=null]
Built communities with : CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.louvain.binaries_1.0.0.201805241334/bin/louvain-linux64, /tmp/graph4697664755187376039.bin, -l, -1, -v, -w, /tmp/graph4697664755187376039.weights, -q, 0, -e, 0.001], workingDir=null]
Invoking ITS tools like this :CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.201805241334/bin/its-reach-linux64, --gc-threshold, 2000000, --quiet, -i, /home/mcc/execution/UpperBounds.pnml.gal, -t, CGAL, -reachable-file, UpperBounds.prop, --nowitness], workingDir=/home/mcc/execution]

its-reach command run as :

/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.201805241334/bin/its-reach-linux64 --gc-threshold 2000000 --quiet -i /home/mcc/execution/UpperBounds.pnml.gal -t CGAL -reachable-file UpperBounds.prop --nowitness
Loading property file UpperBounds.prop.
Read [bounds] property : DoubleExponent-PT-100-UpperBounds-00 with value :i7.u578.p2202
Read [bounds] property : DoubleExponent-PT-100-UpperBounds-01 with value :i9.u764.p2596
Read [bounds] property : DoubleExponent-PT-100-UpperBounds-02 with value :i0.u421.p186
Read [bounds] property : DoubleExponent-PT-100-UpperBounds-03 with value :i27.u2239.p908
Read [bounds] property : DoubleExponent-PT-100-UpperBounds-04 with value :i1.u131.p1270
Read [bounds] property : DoubleExponent-PT-100-UpperBounds-05 with value :i9.u756.p2581
Read [bounds] property : DoubleExponent-PT-100-UpperBounds-06 with value :i20.u1660.p4482
Read [bounds] property : DoubleExponent-PT-100-UpperBounds-07 with value :i27.u2189.p826
Read [bounds] property : DoubleExponent-PT-100-UpperBounds-08 with value :i7.u592.p2235
Read [bounds] property : DoubleExponent-PT-100-UpperBounds-09 with value :i22.u1750.p4699
Read [bounds] property : DoubleExponent-PT-100-UpperBounds-10 with value :i22.u1840.p4928
Read [bounds] property : DoubleExponent-PT-100-UpperBounds-11 with value :i27.u2221.p894
Read [bounds] property : DoubleExponent-PT-100-UpperBounds-12 with value :i9.u766.p2600
Read [bounds] property : DoubleExponent-PT-100-UpperBounds-13 with value :i0.u105.p121
Read [bounds] property : DoubleExponent-PT-100-UpperBounds-14 with value :i18.u1496.p4131
Read [bounds] property : DoubleExponent-PT-100-UpperBounds-15 with value :i10.u874.p2831
built 55 ordering constraints for composite.
built 135 ordering constraints for composite.
built 134 ordering constraints for composite.
built 218 ordering constraints for composite.
built 138 ordering constraints for composite.
built 135 ordering constraints for composite.
built 180 ordering constraints for composite.
built 126 ordering constraints for composite.
built 140 ordering constraints for composite.
built 133 ordering constraints for composite.
built 177 ordering constraints for composite.
built 186 ordering constraints for composite.
built 182 ordering constraints for composite.
built 131 ordering constraints for composite.
built 180 ordering constraints for composite.
built 179 ordering constraints for composite.
built 140 ordering constraints for composite.
built 133 ordering constraints for composite.
built 221 ordering constraints for composite.
built 136 ordering constraints for composite.
built 184 ordering constraints for composite.
built 133 ordering constraints for composite.
built 179 ordering constraints for composite.
built 137 ordering constraints for composite.
built 178 ordering constraints for composite.
built 133 ordering constraints for composite.
built 223 ordering constraints for composite.
built 173 ordering constraints for composite.
built 118 ordering constraints for composite.

BK_STOP 1527989415853

--------------------
content from stderr:

+ export BINDIR=/home/mcc/BenchKit/
+ BINDIR=/home/mcc/BenchKit/
++ pwd
+ export MODEL=/home/mcc/execution
+ MODEL=/home/mcc/execution
+ /home/mcc/BenchKit//runeclipse.sh /home/mcc/execution UpperBounds -its -ltsminpath /home/mcc/BenchKit//lts_install_dir/ -louvain -smt
+ ulimit -s 65536
+ [[ -z '' ]]
+ export LTSMIN_MEM_SIZE=8589934592
+ LTSMIN_MEM_SIZE=8589934592
+ /home/mcc/BenchKit//itstools/its-tools -consoleLog -data /home/mcc/execution/workspace -pnfolder /home/mcc/execution -examination UpperBounds -z3path /home/mcc/BenchKit//z3/bin/z3 -yices2path /home/mcc/BenchKit//yices/bin/yices -its -ltsminpath /home/mcc/BenchKit//lts_install_dir/ -louvain -smt -vmargs -Dosgi.locking=none -Declipse.stateSaveDelayInterval=-1 -Dosgi.configuration.area=/tmp/.eclipse -Xss8m -Xms40m -Xmx8192m -Dfile.encoding=UTF-8 -Dosgi.requiredJavaVersion=1.6
Jun 03, 2018 1:18:54 AM fr.lip6.move.gal.application.Application start
INFO: Running its-tools with arguments : [-pnfolder, /home/mcc/execution, -examination, UpperBounds, -z3path, /home/mcc/BenchKit//z3/bin/z3, -yices2path, /home/mcc/BenchKit//yices/bin/yices, -its, -ltsminpath, /home/mcc/BenchKit//lts_install_dir/, -louvain, -smt]
Jun 03, 2018 1:18:54 AM fr.lip6.move.gal.application.MccTranslator transformPNML
INFO: Parsing pnml file : /home/mcc/execution/model.pnml
Jun 03, 2018 1:18:54 AM fr.lip6.move.gal.nupn.PTNetReader loadFromXML
INFO: Load time of PNML (sax parser for PT used): 222 ms
Jun 03, 2018 1:18:54 AM fr.lip6.move.gal.pnml.togal.PTGALTransformer handlePage
INFO: Transformed 5304 places.
Jun 03, 2018 1:18:54 AM fr.lip6.move.gal.pnml.togal.PTGALTransformer handlePage
INFO: Transformed 4998 transitions.
Jun 03, 2018 1:18:55 AM fr.lip6.move.gal.application.MccTranslator applyOrder
INFO: Applying decomposition
Jun 03, 2018 1:18:55 AM fr.lip6.move.gal.instantiate.GALRewriter flatten
INFO: Flatten gal took : 716 ms
Jun 03, 2018 1:18:56 AM fr.lip6.move.gal.instantiate.GALRewriter flatten
INFO: Flatten gal took : 349 ms
Begin: Sun Jun 3 01:18:56 2018

Computation of communities with the Newman-Girvan Modularity quality function

level 0:
start computation: Sun Jun 3 01:18:56 2018
network size: 5304 nodes, 17792 links, 9996 weight
quality increased from -0.000204499 to 0.395279
end computation: Sun Jun 3 01:18:56 2018
level 1:
start computation: Sun Jun 3 01:18:56 2018
network size: 2273 nodes, 13625 links, 9996 weight
quality increased from 0.395279 to 0.662585
end computation: Sun Jun 3 01:18:56 2018
level 2:
start computation: Sun Jun 3 01:18:56 2018
network size: 672 nodes, 5508 links, 9996 weight
quality increased from 0.662585 to 0.863347
end computation: Sun Jun 3 01:18:56 2018
level 3:
start computation: Sun Jun 3 01:18:56 2018
network size: 123 nodes, 571 links, 9996 weight
quality increased from 0.863347 to 0.92621
end computation: Sun Jun 3 01:18:56 2018
level 4:
start computation: Sun Jun 3 01:18:56 2018
network size: 42 nodes, 128 links, 9996 weight
quality increased from 0.92621 to 0.931864
end computation: Sun Jun 3 01:18:56 2018
level 5:
start computation: Sun Jun 3 01:18:56 2018
network size: 28 nodes, 82 links, 9996 weight
quality increased from 0.931864 to 0.931864
end computation: Sun Jun 3 01:18:56 2018
End: Sun Jun 3 01:18:56 2018
Total duration: 0 sec
0.931864
Jun 03, 2018 1:18:56 AM fr.lip6.move.gal.instantiate.CompositeBuilder decomposeWithOrder
INFO: Decomposing Gal with order
Jun 03, 2018 1:18:57 AM fr.lip6.move.gal.instantiate.GALRewriter flatten
INFO: Flatten gal took : 405 ms
Jun 03, 2018 1:18:57 AM fr.lip6.move.gal.instantiate.CompositeBuilder rewriteArraysToAllowPartition
INFO: Rewriting arrays to variables to allow decomposition.
Jun 03, 2018 1:19:00 AM fr.lip6.move.gal.instantiate.Instantiator fuseIsomorphicEffects
INFO: Removed a total of 1422 redundant transitions.
Jun 03, 2018 1:19:00 AM fr.lip6.move.serialization.SerializationUtil systemToFile
INFO: Time to serialize gal into /home/mcc/execution/UpperBounds.pnml.gal : 113 ms
Jun 03, 2018 1:19:00 AM fr.lip6.move.serialization.SerializationUtil serializePropertiesForITSTools
INFO: Time to serialize properties into /home/mcc/execution/UpperBounds.prop : 1 ms
ITS-tools command line returned an error code 137

Sequence of Actions to be Executed by the VM

This is useful if one wants to reexecute the tool in the VM from the submitted image disk.

set -x
# this is for BenchKit: configuration of major elements for the test
export BK_INPUT="DoubleExponent-PT-100"
export BK_EXAMINATION="UpperBounds"
export BK_TOOL="itstoolsl"
export BK_RESULT_DIR="/tmp/BK_RESULTS/OUTPUTS"
export BK_TIME_CONFINEMENT="3600"
export BK_MEMORY_CONFINEMENT="16384"

# this is specific to your benchmark or test

export BIN_DIR="$HOME/BenchKit/bin"

# remove the execution directoty if it exists (to avoid increse of .vmdk images)
if [ -d execution ] ; then
rm -rf execution
fi

tar xzf /home/mcc/BenchKit/INPUTS/DoubleExponent-PT-100.tgz
mv DoubleExponent-PT-100 execution
cd execution
pwd
ls -lh

# this is for BenchKit: explicit launching of the test
echo "====================================================================="
echo " Generated by BenchKit 2-3637"
echo " Executing tool itstoolsl"
echo " Input is DoubleExponent-PT-100, examination is UpperBounds"
echo " Time confinement is $BK_TIME_CONFINEMENT seconds"
echo " Memory confinement is 16384 MBytes"
echo " Number of cores is 4"
echo " Run identifier is r285-csrt-152749176000236"
echo "====================================================================="
echo
echo "--------------------"
echo "content from stdout:"
echo
echo "=== Data for post analysis generated by BenchKit (invocation template)"
echo
if [ "UpperBounds" = "UpperBounds" ] ; then
echo "The expected result is a vector of positive values"
echo NUM_VECTOR
elif [ "UpperBounds" != "StateSpace" ] ; then
echo "The expected result is a vector of booleans"
echo BOOL_VECTOR
else
echo "no data necessary for post analysis"
fi
echo
if [ -f "UpperBounds.txt" ] ; then
echo "here is the order used to build the result vector(from text file)"
for x in $(grep Property UpperBounds.txt | cut -d ' ' -f 2 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ -f "UpperBounds.xml" ] ; then # for cunf (txt files deleted;-)
echo echo "here is the order used to build the result vector(from xml file)"
for x in $(grep '' UpperBounds.xml | cut -d '>' -f 2 | cut -d '<' -f 1 | sort -u) ; do
echo "FORMULA_NAME $x"
done
fi
echo
echo "=== Now, execution of the tool begins"
echo
echo -n "BK_START "
date -u +%s%3N
echo
timeout -s 9 $BK_TIME_CONFINEMENT bash -c "/home/mcc/BenchKit/BenchKit_head.sh 2> STDERR ; echo ; echo -n \"BK_STOP \" ; date -u +%s%3N"
if [ $? -eq 137 ] ; then
echo
echo "BK_TIME_CONFINEMENT_REACHED"
fi
echo
echo "--------------------"
echo "content from stderr:"
echo
cat STDERR ;