Execution Chart

We display below the execution chart for this examination (boot time has been removed).

Trace from the execution

Waiting for the VM to be ready (probing ssh)
......................
/home/mcc/execution
total 200K
-rw-r--r-- 1 mcc users 3.4K May 30 20:37 CTLCardinality.txt
-rw-r--r-- 1 mcc users 20K May 30 20:37 CTLCardinality.xml
-rw-r--r-- 1 mcc users 2.6K May 29 14:12 CTLFireability.txt
-rw-r--r-- 1 mcc users 19K May 29 14:12 CTLFireability.xml
-rw-r--r-- 1 mcc users 4.0K May 24 11:17 GenericPropertiesDefinition.xml
-rw-r--r-- 1 mcc users 6.3K May 24 11:17 GenericPropertiesVerdict.xml
-rw-r--r-- 1 mcc users 2.2K May 28 09:43 LTLCardinality.txt
-rw-r--r-- 1 mcc users 9.2K May 28 09:43 LTLCardinality.xml
-rw-r--r-- 1 mcc users 1.9K May 28 07:54 LTLFireability.txt
-rw-r--r-- 1 mcc users 9.9K May 28 07:54 LTLFireability.xml
-rw-r--r-- 1 mcc users 1 May 24 11:17 NewModel
-rw-r--r-- 1 mcc users 3.0K May 28 06:10 ReachabilityCardinality.txt
-rw-r--r-- 1 mcc users 15K May 28 06:10 ReachabilityCardinality.xml
-rw-r--r-- 1 mcc users 110 May 26 06:29 ReachabilityDeadlock.txt
-rw-r--r-- 1 mcc users 348 May 26 06:29 ReachabilityDeadlock.xml
-rw-r--r-- 1 mcc users 2.7K May 27 03:35 ReachabilityFireability.txt
-rw-r--r-- 1 mcc users 17K May 27 03:35 ReachabilityFireability.xml
-rw-r--r-- 1 mcc users 1.6K May 28 07:31 UpperBounds.txt
-rw-r--r-- 1 mcc users 3.7K May 28 07:31 UpperBounds.xml
-rw-r--r-- 1 mcc users 6 May 24 11:17 equiv_col
-rw-r--r-- 1 mcc users 4 May 24 11:17 instance
-rw-r--r-- 1 mcc users 6 May 24 11:17 iscolored
-rw-r--r-- 1 mcc users 32K May 24 11:17 model.pnml
=====================================================================
Generated by BenchKit 2-3637
Executing tool itstoolsl
Input is DiscoveryGPU-PT-09a, examination is ReachabilityDeadlock
Time confinement is 3600 seconds
Memory confinement is 16384 MBytes
Number of cores is 4
Run identifier is r285-csrt-152749175700062
=====================================================================

--------------------
content from stdout:

=== Data for post analysis generated by BenchKit (invocation template)

The expected result is a vector of booleans
BOOL_VECTOR

here is the order used to build the result vector(from text file)
FORMULA_NAME DiscoveryGPU-PT-09a-ReachabilityDeadlock-0

=== Now, execution of the tool begins

BK_START 1527986047016

Flatten gal took : 105 ms
Constant places removed 1 places and 1 transitions.
Performed 9 Post agglomeration using F-continuation condition.
Iterating post reduction 0 with 10 rules applied. Total rules applied 10 place count 92 transition count 117
Constant places removed 11 places and 0 transitions.
Reduce isomorphic transitions removed 9 transitions.
Performed 27 Post agglomeration using F-continuation condition.
Iterating post reduction 1 with 47 rules applied. Total rules applied 57 place count 81 transition count 81
Constant places removed 36 places and 9 transitions.
Iterating post reduction 2 with 36 rules applied. Total rules applied 93 place count 45 transition count 72
Performed 18 Pre agglomeration using Quasi-Persistent + HF-interchangeable + Divergent Free condition.
Pre-agglomeration after 3 with 18 Pre rules applied. Total rules applied 93 place count 45 transition count 54
Constant places removed 18 places and 0 transitions.
Iterating post reduction 3 with 18 rules applied. Total rules applied 111 place count 27 transition count 54
Symmetric choice reduction at 4 with 9 rule applications. Total rules 120 place count 27 transition count 54
Constant places removed 9 places and 18 transitions.
Iterating post reduction 4 with 9 rules applied. Total rules applied 129 place count 18 transition count 36
Applied a total of 129 rules in 12 ms. Remains 18 /93 variables (removed 75) and now considering 36/127 (removed 91) transitions.
Normalized transition count is 19
// Phase 1: matrix 19 rows 18 cols
Using solver Z3 to compute partial order matrices.
Built C files in :
/home/mcc/execution
Invoking ITS tools like this :CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.201805241334/bin/its-ctl-linux64, --gc-threshold, 2000000, --quiet, -i, /home/mcc/execution/ReachabilityDeadlock.pnml.gal, -t, CGAL, -ctl, DEADLOCK], workingDir=/home/mcc/execution]

its-ctl command run as :

/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.201805241334/bin/its-ctl-linux64 --gc-threshold 2000000 --quiet -i /home/mcc/execution/ReachabilityDeadlock.pnml.gal -t CGAL -ctl DEADLOCK
No direction supplied, using forward translation only.
built 0 ordering constraints for composite.
Model ,|S| ,Time ,Mem(kb) ,fin. SDD ,fin. DDD ,peak SDD ,peak DDD ,SDD Hom ,SDD cache peak ,DDD Hom ,DDD cachepeak ,SHom cache
reachable,19683,0.009119,4528,11,4,31,13,26,0,11,9,0


Model ,|S| ,Time ,Mem(kb) ,fin. SDD ,fin. DDD ,peak SDD ,peak DDD ,SDD Hom ,SDD cache peak ,DDD Hom ,DDD cachepeak ,SHom cache
dead,1,0.009776,4528,11,3,78,21,54,53,36,32,72

System contains 1 deadlocks (shown below if less than --print-limit option) !
FORMULA DiscoveryGPU-PT-09a-ReachabilityDeadlock-0 TRUE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL USE_NUPN
[ u9={[ ]
} u8={[ ]
} u7={[ ]
} u6={[ ]
} u5={[ ]
} u4={[ ]
} u3={[ ]
} u2={[ ]
} u1={[ ]
} ]
Presburger conditions satisfied. Using coverability to approximate state space in K-Induction.
Normalized transition count is 19
// Phase 1: matrix 19 rows 18 cols
Running compilation step : CommandLine [args=[gcc, -c, -I/home/mcc/BenchKit//lts_install_dir//include, -I., -std=c99, -fPIC, -O3, model.c], workingDir=/home/mcc/execution]
WARNING : LTS min runner thread was asked to interrupt. Dying gracefully.

BK_STOP 1527986050882

--------------------
content from stderr:

+ export BINDIR=/home/mcc/BenchKit/
+ BINDIR=/home/mcc/BenchKit/
++ pwd
+ export MODEL=/home/mcc/execution
+ MODEL=/home/mcc/execution
+ /home/mcc/BenchKit//runeclipse.sh /home/mcc/execution ReachabilityDeadlock -its -ltsminpath /home/mcc/BenchKit//lts_install_dir/ -louvain -smt
+ ulimit -s 65536
+ [[ -z '' ]]
+ export LTSMIN_MEM_SIZE=8589934592
+ LTSMIN_MEM_SIZE=8589934592
+ /home/mcc/BenchKit//itstools/its-tools -consoleLog -data /home/mcc/execution/workspace -pnfolder /home/mcc/execution -examination ReachabilityDeadlock -z3path /home/mcc/BenchKit//z3/bin/z3 -yices2path /home/mcc/BenchKit//yices/bin/yices -its -ltsminpath /home/mcc/BenchKit//lts_install_dir/ -louvain -smt -vmargs -Dosgi.locking=none -Declipse.stateSaveDelayInterval=-1 -Dosgi.configuration.area=/tmp/.eclipse -Xss8m -Xms40m -Xmx8192m -Dfile.encoding=UTF-8 -Dosgi.requiredJavaVersion=1.6
Jun 03, 2018 12:34:09 AM fr.lip6.move.gal.application.Application start
INFO: Running its-tools with arguments : [-pnfolder, /home/mcc/execution, -examination, ReachabilityDeadlock, -z3path, /home/mcc/BenchKit//z3/bin/z3, -yices2path, /home/mcc/BenchKit//yices/bin/yices, -its, -ltsminpath, /home/mcc/BenchKit//lts_install_dir/, -louvain, -smt]
Jun 03, 2018 12:34:09 AM fr.lip6.move.gal.application.MccTranslator transformPNML
INFO: Parsing pnml file : /home/mcc/execution/model.pnml
Jun 03, 2018 12:34:09 AM fr.lip6.move.gal.nupn.PTNetReader loadFromXML
INFO: Load time of PNML (sax parser for PT used): 52 ms
Jun 03, 2018 12:34:09 AM fr.lip6.move.gal.pnml.togal.PTGALTransformer handlePage
INFO: Transformed 93 places.
Jun 03, 2018 12:34:10 AM fr.lip6.move.gal.pnml.togal.PTGALTransformer handlePage
INFO: Transformed 127 transitions.
Jun 03, 2018 12:34:10 AM fr.lip6.move.gal.pnml.togal.PnmlToGalTransformer transform
INFO: Found NUPN structural information;
Jun 03, 2018 12:34:10 AM fr.lip6.move.serialization.SerializationUtil systemToFile
INFO: Time to serialize gal into /home/mcc/execution/model.pnml.img.gal : 21 ms
Jun 03, 2018 12:34:10 AM fr.lip6.move.gal.instantiate.GALRewriter flatten
INFO: Flatten gal took : 96 ms
Jun 03, 2018 12:34:10 AM fr.lip6.move.serialization.SerializationUtil systemToFile
INFO: Time to serialize gal into /home/mcc/execution/model.pnml.simple.gal : 3 ms
Jun 03, 2018 12:34:10 AM fr.lip6.move.gal.semantics.DeterministicNextBuilder getDeterministicNext
INFO: Input system was already deterministic with 127 transitions.
Jun 03, 2018 12:34:10 AM fr.lip6.move.gal.application.MccTranslator applyOrder
INFO: Applying decomposition
Jun 03, 2018 12:34:10 AM fr.lip6.move.gal.instantiate.GALRewriter flatten
INFO: Flatten gal took : 5 ms
Jun 03, 2018 12:34:10 AM fr.lip6.move.gal.instantiate.GALRewriter flatten
INFO: Flatten gal took : 5 ms
Jun 03, 2018 12:34:10 AM fr.lip6.move.gal.instantiate.CompositeBuilder decomposeWithOrder
INFO: Decomposing Gal with order
Jun 03, 2018 12:34:10 AM fr.lip6.move.gal.instantiate.GALRewriter flatten
INFO: Flatten gal took : 5 ms
Jun 03, 2018 12:34:10 AM fr.lip6.move.gal.instantiate.CompositeBuilder rewriteArraysToAllowPartition
INFO: Rewriting arrays to variables to allow decomposition.
Jun 03, 2018 12:34:10 AM fr.lip6.move.gal.semantics.DeterministicNextBuilder getDeterministicNext
INFO: Input system was already deterministic with 36 transitions.
Jun 03, 2018 12:34:10 AM fr.lip6.move.serialization.SerializationUtil systemToFile
INFO: Time to serialize gal into /home/mcc/execution/ReachabilityDeadlock.pnml.gal : 1 ms
Jun 03, 2018 12:34:10 AM fr.lip6.move.gal.gal2smt.bmc.KInductionSolver computeAndDeclareInvariants
INFO: Computed 0 place invariants in 1 ms
Skipping mayMatrices nes/nds SMT solver raised an exception :(error "Failed to assert expression: java.io.IOException: Stream closed (or (tr1 0) (tr3 0))")
java.lang.RuntimeException: SMT solver raised an exception :(error "Failed to assert expression: java.io.IOException: Stream closed (or (tr1 0) (tr3 0))")
at fr.lip6.move.gal.gal2smt.bmc.KInductionSolver.assertCouldModifyNext(KInductionSolver.java:212)
at fr.lip6.move.gal.gal2smt.bmc.KInductionSolver.init(KInductionSolver.java:90)
at fr.lip6.move.gal.gal2smt.bmc.NecessaryEnablingsolver.init(NecessaryEnablingsolver.java:71)
at fr.lip6.move.gal.gal2pins.Gal2PinsTransformerNext.printLabels(Gal2PinsTransformerNext.java:471)
at fr.lip6.move.gal.gal2pins.Gal2PinsTransformerNext.printDependencyMatrix(Gal2PinsTransformerNext.java:209)
at fr.lip6.move.gal.gal2pins.Gal2PinsTransformerNext.buildBodyFile(Gal2PinsTransformerNext.java:85)
at fr.lip6.move.gal.gal2pins.Gal2PinsTransformerNext.transform(Gal2PinsTransformerNext.java:830)
at fr.lip6.move.gal.application.LTSminRunner$1.run(LTSminRunner.java:71)
at java.lang.Thread.run(Thread.java:748)
Jun 03, 2018 12:34:10 AM fr.lip6.move.gal.gal2pins.Gal2PinsTransformerNext transform
INFO: Built C files in 92ms conformant to PINS in folder :/home/mcc/execution

Sequence of Actions to be Executed by the VM

This is useful if one wants to reexecute the tool in the VM from the submitted image disk.

set -x
# this is for BenchKit: configuration of major elements for the test
export BK_INPUT="DiscoveryGPU-PT-09a"
export BK_EXAMINATION="ReachabilityDeadlock"
export BK_TOOL="itstoolsl"
export BK_RESULT_DIR="/tmp/BK_RESULTS/OUTPUTS"
export BK_TIME_CONFINEMENT="3600"
export BK_MEMORY_CONFINEMENT="16384"

# this is specific to your benchmark or test

export BIN_DIR="$HOME/BenchKit/bin"

# remove the execution directoty if it exists (to avoid increse of .vmdk images)
if [ -d execution ] ; then
rm -rf execution
fi

tar xzf /home/mcc/BenchKit/INPUTS/DiscoveryGPU-PT-09a.tgz
mv DiscoveryGPU-PT-09a execution
cd execution
pwd
ls -lh

# this is for BenchKit: explicit launching of the test
echo "====================================================================="
echo " Generated by BenchKit 2-3637"
echo " Executing tool itstoolsl"
echo " Input is DiscoveryGPU-PT-09a, examination is ReachabilityDeadlock"
echo " Time confinement is $BK_TIME_CONFINEMENT seconds"
echo " Memory confinement is 16384 MBytes"
echo " Number of cores is 4"
echo " Run identifier is r285-csrt-152749175700062"
echo "====================================================================="
echo
echo "--------------------"
echo "content from stdout:"
echo
echo "=== Data for post analysis generated by BenchKit (invocation template)"
echo
if [ "ReachabilityDeadlock" = "UpperBounds" ] ; then
echo "The expected result is a vector of positive values"
echo NUM_VECTOR
elif [ "ReachabilityDeadlock" != "StateSpace" ] ; then
echo "The expected result is a vector of booleans"
echo BOOL_VECTOR
else
echo "no data necessary for post analysis"
fi
echo
if [ -f "ReachabilityDeadlock.txt" ] ; then
echo "here is the order used to build the result vector(from text file)"
for x in $(grep Property ReachabilityDeadlock.txt | cut -d ' ' -f 2 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ -f "ReachabilityDeadlock.xml" ] ; then # for cunf (txt files deleted;-)
echo echo "here is the order used to build the result vector(from xml file)"
for x in $(grep '' ReachabilityDeadlock.xml | cut -d '>' -f 2 | cut -d '<' -f 1 | sort -u) ; do
echo "FORMULA_NAME $x"
done
fi
echo
echo "=== Now, execution of the tool begins"
echo
echo -n "BK_START "
date -u +%s%3N
echo
timeout -s 9 $BK_TIME_CONFINEMENT bash -c "/home/mcc/BenchKit/BenchKit_head.sh 2> STDERR ; echo ; echo -n \"BK_STOP \" ; date -u +%s%3N"
if [ $? -eq 137 ] ; then
echo
echo "BK_TIME_CONFINEMENT_REACHED"
fi
echo
echo "--------------------"
echo "content from stderr:"
echo
cat STDERR ;