Execution Chart

We display below the execution chart for this examination (boot time has been removed).

Trace from the execution

Waiting for the VM to be ready (probing ssh)
.............................................................
/home/mcc/execution
total 196K
-rw-r--r-- 1 mcc users 3.3K May 30 20:18 CTLCardinality.txt
-rw-r--r-- 1 mcc users 19K May 30 20:18 CTLCardinality.xml
-rw-r--r-- 1 mcc users 2.3K May 29 13:51 CTLFireability.txt
-rw-r--r-- 1 mcc users 15K May 29 13:51 CTLFireability.xml
-rw-r--r-- 1 mcc users 4.0K May 24 11:17 GenericPropertiesDefinition.xml
-rw-r--r-- 1 mcc users 6.3K May 24 11:17 GenericPropertiesVerdict.xml
-rw-r--r-- 1 mcc users 2.5K May 28 09:40 LTLCardinality.txt
-rw-r--r-- 1 mcc users 12K May 28 09:40 LTLCardinality.xml
-rw-r--r-- 1 mcc users 1.8K May 28 07:50 LTLFireability.txt
-rw-r--r-- 1 mcc users 8.8K May 28 07:50 LTLFireability.xml
-rw-r--r-- 1 mcc users 1 May 24 11:17 NewModel
-rw-r--r-- 1 mcc users 4.0K May 28 06:08 ReachabilityCardinality.txt
-rw-r--r-- 1 mcc users 22K May 28 06:08 ReachabilityCardinality.xml
-rw-r--r-- 1 mcc users 110 May 26 06:29 ReachabilityDeadlock.txt
-rw-r--r-- 1 mcc users 348 May 26 06:29 ReachabilityDeadlock.xml
-rw-r--r-- 1 mcc users 2.8K May 27 03:32 ReachabilityFireability.txt
-rw-r--r-- 1 mcc users 18K May 27 03:32 ReachabilityFireability.xml
-rw-r--r-- 1 mcc users 1.6K May 28 07:31 UpperBounds.txt
-rw-r--r-- 1 mcc users 3.7K May 28 07:31 UpperBounds.xml
-rw-r--r-- 1 mcc users 6 May 24 11:17 equiv_col
-rw-r--r-- 1 mcc users 4 May 24 11:17 instance
-rw-r--r-- 1 mcc users 6 May 24 11:17 iscolored
-rw-r--r-- 1 mcc users 22K May 24 11:17 model.pnml
=====================================================================
Generated by BenchKit 2-3637
Executing tool itstoolsl
Input is DiscoveryGPU-PT-06a, examination is ReachabilityDeadlock
Time confinement is 3600 seconds
Memory confinement is 16384 MBytes
Number of cores is 4
Run identifier is r285-csrt-152749175700008
=====================================================================

--------------------
content from stdout:

=== Data for post analysis generated by BenchKit (invocation template)

The expected result is a vector of booleans
BOOL_VECTOR

here is the order used to build the result vector(from text file)
FORMULA_NAME DiscoveryGPU-PT-06a-ReachabilityDeadlock-0

=== Now, execution of the tool begins

BK_START 1527985986066

Flatten gal took : 87 ms
Constant places removed 1 places and 1 transitions.
Performed 6 Post agglomeration using F-continuation condition.
Iterating post reduction 0 with 7 rules applied. Total rules applied 7 place count 62 transition count 78
Constant places removed 8 places and 0 transitions.
Reduce isomorphic transitions removed 6 transitions.
Performed 18 Post agglomeration using F-continuation condition.
Iterating post reduction 1 with 32 rules applied. Total rules applied 39 place count 54 transition count 54
Constant places removed 24 places and 6 transitions.
Iterating post reduction 2 with 24 rules applied. Total rules applied 63 place count 30 transition count 48
Performed 12 Pre agglomeration using Quasi-Persistent + HF-interchangeable + Divergent Free condition.
Pre-agglomeration after 3 with 12 Pre rules applied. Total rules applied 63 place count 30 transition count 36
Constant places removed 12 places and 0 transitions.
Iterating post reduction 3 with 12 rules applied. Total rules applied 75 place count 18 transition count 36
Symmetric choice reduction at 4 with 6 rule applications. Total rules 81 place count 18 transition count 36
Constant places removed 6 places and 12 transitions.
Iterating post reduction 4 with 6 rules applied. Total rules applied 87 place count 12 transition count 24
Applied a total of 87 rules in 15 ms. Remains 12 /63 variables (removed 51) and now considering 24/85 (removed 61) transitions.
Normalized transition count is 13
// Phase 1: matrix 13 rows 12 cols
Using solver Z3 to compute partial order matrices.
Built C files in :
/home/mcc/execution
Invoking ITS tools like this :CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.201805241334/bin/its-ctl-linux64, --gc-threshold, 2000000, --quiet, -i, /home/mcc/execution/ReachabilityDeadlock.pnml.gal, -t, CGAL, -ctl, DEADLOCK], workingDir=/home/mcc/execution]
Presburger conditions satisfied. Using coverability to approximate state space in K-Induction.
Normalized transition count is 13
// Phase 1: matrix 13 rows 12 cols

its-ctl command run as :

/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.201805241334/bin/its-ctl-linux64 --gc-threshold 2000000 --quiet -i /home/mcc/execution/ReachabilityDeadlock.pnml.gal -t CGAL -ctl DEADLOCK
No direction supplied, using forward translation only.
built 0 ordering constraints for composite.
Model ,|S| ,Time ,Mem(kb) ,fin. SDD ,fin. DDD ,peak SDD ,peak DDD ,SDD Hom ,SDD cache peak ,DDD Hom ,DDD cachepeak ,SHom cache
reachable,729,0.015068,4228,8,4,22,13,20,0,11,9,0


Model ,|S| ,Time ,Mem(kb) ,fin. SDD ,fin. DDD ,peak SDD ,peak DDD ,SDD Hom ,SDD cache peak ,DDD Hom ,DDD cachepeak ,SHom cache
dead,1,0.015455,4228,8,3,54,21,39,38,36,32,39

System contains 1 deadlocks (shown below if less than --print-limit option) !
FORMULA DiscoveryGPU-PT-06a-ReachabilityDeadlock-0 TRUE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL USE_NUPN
[ u6={[ ]
} u5={[ ]
} u4={[ ]
} u3={[ ]
} u2={[ ]
} u1={[ ]
} ]
Running compilation step : CommandLine [args=[gcc, -c, -I/home/mcc/BenchKit//lts_install_dir//include, -I., -std=c99, -fPIC, -O3, model.c], workingDir=/home/mcc/execution]
WARNING : LTS min runner thread was asked to interrupt. Dying gracefully.

BK_STOP 1527985989183

--------------------
content from stderr:

+ export BINDIR=/home/mcc/BenchKit/
+ BINDIR=/home/mcc/BenchKit/
++ pwd
+ export MODEL=/home/mcc/execution
+ MODEL=/home/mcc/execution
+ /home/mcc/BenchKit//runeclipse.sh /home/mcc/execution ReachabilityDeadlock -its -ltsminpath /home/mcc/BenchKit//lts_install_dir/ -louvain -smt
+ ulimit -s 65536
+ [[ -z '' ]]
+ export LTSMIN_MEM_SIZE=8589934592
+ LTSMIN_MEM_SIZE=8589934592
+ /home/mcc/BenchKit//itstools/its-tools -consoleLog -data /home/mcc/execution/workspace -pnfolder /home/mcc/execution -examination ReachabilityDeadlock -z3path /home/mcc/BenchKit//z3/bin/z3 -yices2path /home/mcc/BenchKit//yices/bin/yices -its -ltsminpath /home/mcc/BenchKit//lts_install_dir/ -louvain -smt -vmargs -Dosgi.locking=none -Declipse.stateSaveDelayInterval=-1 -Dosgi.configuration.area=/tmp/.eclipse -Xss8m -Xms40m -Xmx8192m -Dfile.encoding=UTF-8 -Dosgi.requiredJavaVersion=1.6
Jun 03, 2018 12:33:08 AM fr.lip6.move.gal.application.Application start
INFO: Running its-tools with arguments : [-pnfolder, /home/mcc/execution, -examination, ReachabilityDeadlock, -z3path, /home/mcc/BenchKit//z3/bin/z3, -yices2path, /home/mcc/BenchKit//yices/bin/yices, -its, -ltsminpath, /home/mcc/BenchKit//lts_install_dir/, -louvain, -smt]
Jun 03, 2018 12:33:08 AM fr.lip6.move.gal.application.MccTranslator transformPNML
INFO: Parsing pnml file : /home/mcc/execution/model.pnml
Jun 03, 2018 12:33:08 AM fr.lip6.move.gal.nupn.PTNetReader loadFromXML
INFO: Load time of PNML (sax parser for PT used): 59 ms
Jun 03, 2018 12:33:08 AM fr.lip6.move.gal.pnml.togal.PTGALTransformer handlePage
INFO: Transformed 63 places.
Jun 03, 2018 12:33:08 AM fr.lip6.move.gal.pnml.togal.PTGALTransformer handlePage
INFO: Transformed 85 transitions.
Jun 03, 2018 12:33:08 AM fr.lip6.move.gal.pnml.togal.PnmlToGalTransformer transform
INFO: Found NUPN structural information;
Jun 03, 2018 12:33:08 AM fr.lip6.move.serialization.SerializationUtil systemToFile
INFO: Time to serialize gal into /home/mcc/execution/model.pnml.img.gal : 15 ms
Jun 03, 2018 12:33:08 AM fr.lip6.move.gal.instantiate.GALRewriter flatten
INFO: Flatten gal took : 81 ms
Jun 03, 2018 12:33:08 AM fr.lip6.move.serialization.SerializationUtil systemToFile
INFO: Time to serialize gal into /home/mcc/execution/model.pnml.simple.gal : 3 ms
Jun 03, 2018 12:33:08 AM fr.lip6.move.gal.semantics.DeterministicNextBuilder getDeterministicNext
INFO: Input system was already deterministic with 85 transitions.
Jun 03, 2018 12:33:08 AM fr.lip6.move.gal.application.MccTranslator applyOrder
INFO: Applying decomposition
Jun 03, 2018 12:33:08 AM fr.lip6.move.gal.instantiate.GALRewriter flatten
INFO: Flatten gal took : 3 ms
Jun 03, 2018 12:33:08 AM fr.lip6.move.gal.instantiate.GALRewriter flatten
INFO: Flatten gal took : 2 ms
Jun 03, 2018 12:33:08 AM fr.lip6.move.gal.instantiate.CompositeBuilder decomposeWithOrder
INFO: Decomposing Gal with order
Jun 03, 2018 12:33:08 AM fr.lip6.move.gal.instantiate.GALRewriter flatten
INFO: Flatten gal took : 2 ms
Jun 03, 2018 12:33:08 AM fr.lip6.move.gal.instantiate.CompositeBuilder rewriteArraysToAllowPartition
INFO: Rewriting arrays to variables to allow decomposition.
Jun 03, 2018 12:33:08 AM fr.lip6.move.serialization.SerializationUtil systemToFile
INFO: Time to serialize gal into /home/mcc/execution/ReachabilityDeadlock.pnml.gal : 1 ms
Jun 03, 2018 12:33:08 AM fr.lip6.move.gal.semantics.DeterministicNextBuilder getDeterministicNext
INFO: Input system was already deterministic with 24 transitions.
Jun 03, 2018 12:33:08 AM fr.lip6.move.gal.gal2smt.bmc.KInductionSolver computeAndDeclareInvariants
INFO: Computed 0 place invariants in 1 ms
Jun 03, 2018 12:33:08 AM fr.lip6.move.gal.gal2smt.bmc.KInductionSolver init
INFO: Proved 12 variables to be positive in 22 ms
Jun 03, 2018 12:33:08 AM fr.lip6.move.gal.gal2smt.bmc.NecessaryEnablingsolver computeAblingMatrix
INFO: Computing symmetric may disable matrix : 24 transitions.
Jun 03, 2018 12:33:08 AM fr.lip6.move.gal.gal2smt.bmc.NecessaryEnablingsolver printStats
INFO: Computation of disable matrix completed :0/24 took 0 ms. Total solver calls (SAT/UNSAT): 0(0/0)
Jun 03, 2018 12:33:08 AM fr.lip6.move.gal.gal2smt.bmc.NecessaryEnablingsolver printStats
INFO: Computation of Complete disable matrix. took 1 ms. Total solver calls (SAT/UNSAT): 0(0/0)
Jun 03, 2018 12:33:08 AM fr.lip6.move.gal.gal2smt.bmc.NecessaryEnablingsolver computeAblingMatrix
INFO: Computing symmetric may enable matrix : 24 transitions.
Jun 03, 2018 12:33:08 AM fr.lip6.move.gal.gal2smt.bmc.NecessaryEnablingsolver printStats
INFO: Computation of Complete enable matrix. took 0 ms. Total solver calls (SAT/UNSAT): 0(0/0)
Jun 03, 2018 12:33:08 AM fr.lip6.move.gal.gal2smt.bmc.NecessaryEnablingsolver computeCoEnablingMatrix
INFO: Computing symmetric co enabling matrix : 24 transitions.
Jun 03, 2018 12:33:08 AM org.smtlib.impl.Script execute
WARNING: Script execution failed on command (declare-fun s0 () (Array Int Int)) with error
Jun 03, 2018 12:33:08 AM org.smtlib.impl.Script execute
WARNING: Script execution failed on command (assert (>= (select s0 0) 1)) with error (error "Failed to assert expression: java.io.IOException: Stream closed (>= (select s0 0) 1)")
[(declare-fun s0 () (Array Int Int)), (assert (>= (select s0 0) 1)), (assert (>= (select s0 0) 0))]
Skipping mayMatrices nes/nds SMT solver raised an exception or timeout when executing script :
org.smtlib.impl.Script@50ca658
java.lang.RuntimeException: SMT solver raised an exception or timeout when executing script :
org.smtlib.impl.Script@50ca658
at fr.lip6.move.gal.gal2smt.bmc.NecessaryEnablingsolver.computeCoEnablingMatrix(NecessaryEnablingsolver.java:448)
at fr.lip6.move.gal.gal2pins.Gal2PinsTransformerNext.printLabels(Gal2PinsTransformerNext.java:530)
at fr.lip6.move.gal.gal2pins.Gal2PinsTransformerNext.printDependencyMatrix(Gal2PinsTransformerNext.java:209)
at fr.lip6.move.gal.gal2pins.Gal2PinsTransformerNext.buildBodyFile(Gal2PinsTransformerNext.java:85)
at fr.lip6.move.gal.gal2pins.Gal2PinsTransformerNext.transform(Gal2PinsTransformerNext.java:830)
at fr.lip6.move.gal.application.LTSminRunner$1.run(LTSminRunner.java:71)
at java.lang.Thread.run(Thread.java:748)
Jun 03, 2018 12:33:08 AM fr.lip6.move.gal.gal2pins.Gal2PinsTransformerNext transform
INFO: Built C files in 105ms conformant to PINS in folder :/home/mcc/execution

Sequence of Actions to be Executed by the VM

This is useful if one wants to reexecute the tool in the VM from the submitted image disk.

set -x
# this is for BenchKit: configuration of major elements for the test
export BK_INPUT="DiscoveryGPU-PT-06a"
export BK_EXAMINATION="ReachabilityDeadlock"
export BK_TOOL="itstoolsl"
export BK_RESULT_DIR="/tmp/BK_RESULTS/OUTPUTS"
export BK_TIME_CONFINEMENT="3600"
export BK_MEMORY_CONFINEMENT="16384"

# this is specific to your benchmark or test

export BIN_DIR="$HOME/BenchKit/bin"

# remove the execution directoty if it exists (to avoid increse of .vmdk images)
if [ -d execution ] ; then
rm -rf execution
fi

tar xzf /home/mcc/BenchKit/INPUTS/DiscoveryGPU-PT-06a.tgz
mv DiscoveryGPU-PT-06a execution
cd execution
pwd
ls -lh

# this is for BenchKit: explicit launching of the test
echo "====================================================================="
echo " Generated by BenchKit 2-3637"
echo " Executing tool itstoolsl"
echo " Input is DiscoveryGPU-PT-06a, examination is ReachabilityDeadlock"
echo " Time confinement is $BK_TIME_CONFINEMENT seconds"
echo " Memory confinement is 16384 MBytes"
echo " Number of cores is 4"
echo " Run identifier is r285-csrt-152749175700008"
echo "====================================================================="
echo
echo "--------------------"
echo "content from stdout:"
echo
echo "=== Data for post analysis generated by BenchKit (invocation template)"
echo
if [ "ReachabilityDeadlock" = "UpperBounds" ] ; then
echo "The expected result is a vector of positive values"
echo NUM_VECTOR
elif [ "ReachabilityDeadlock" != "StateSpace" ] ; then
echo "The expected result is a vector of booleans"
echo BOOL_VECTOR
else
echo "no data necessary for post analysis"
fi
echo
if [ -f "ReachabilityDeadlock.txt" ] ; then
echo "here is the order used to build the result vector(from text file)"
for x in $(grep Property ReachabilityDeadlock.txt | cut -d ' ' -f 2 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ -f "ReachabilityDeadlock.xml" ] ; then # for cunf (txt files deleted;-)
echo echo "here is the order used to build the result vector(from xml file)"
for x in $(grep '' ReachabilityDeadlock.xml | cut -d '>' -f 2 | cut -d '<' -f 1 | sort -u) ; do
echo "FORMULA_NAME $x"
done
fi
echo
echo "=== Now, execution of the tool begins"
echo
echo -n "BK_START "
date -u +%s%3N
echo
timeout -s 9 $BK_TIME_CONFINEMENT bash -c "/home/mcc/BenchKit/BenchKit_head.sh 2> STDERR ; echo ; echo -n \"BK_STOP \" ; date -u +%s%3N"
if [ $? -eq 137 ] ; then
echo
echo "BK_TIME_CONFINEMENT_REACHED"
fi
echo
echo "--------------------"
echo "content from stderr:"
echo
cat STDERR ;