Execution Chart

We display below the execution chart for this examination (boot time has been removed).

Trace from the execution

Waiting for the VM to be ready (probing ssh)
.................
/home/mcc/execution
total 348K
-rw-r--r-- 1 mcc users 4.4K May 30 21:45 CTLCardinality.txt
-rw-r--r-- 1 mcc users 22K May 30 21:45 CTLCardinality.xml
-rw-r--r-- 1 mcc users 6.8K May 29 15:49 CTLFireability.txt
-rw-r--r-- 1 mcc users 23K May 29 15:49 CTLFireability.xml
-rw-r--r-- 1 mcc users 2.8K May 28 09:52 LTLCardinality.txt
-rw-r--r-- 1 mcc users 12K May 28 09:52 LTLCardinality.xml
-rw-r--r-- 1 mcc users 3.4K May 28 08:07 LTLFireability.txt
-rw-r--r-- 1 mcc users 11K May 28 08:07 LTLFireability.xml
-rw-r--r-- 1 mcc users 1 May 24 11:17 NewModel
-rw-r--r-- 1 mcc users 4.3K May 28 06:38 ReachabilityCardinality.txt
-rw-r--r-- 1 mcc users 20K May 28 06:38 ReachabilityCardinality.xml
-rw-r--r-- 1 mcc users 106 May 26 06:29 ReachabilityDeadlock.txt
-rw-r--r-- 1 mcc users 344 May 26 06:29 ReachabilityDeadlock.xml
-rw-r--r-- 1 mcc users 4.7K May 27 04:07 ReachabilityFireability.txt
-rw-r--r-- 1 mcc users 14K May 27 04:07 ReachabilityFireability.xml
-rw-r--r-- 1 mcc users 1.7K May 28 07:31 UpperBounds.txt
-rw-r--r-- 1 mcc users 3.8K May 28 07:31 UpperBounds.xml
-rw-r--r-- 1 mcc users 6 May 24 11:17 equiv_col
-rw-r--r-- 1 mcc users 5 May 24 11:17 instance
-rw-r--r-- 1 mcc users 6 May 24 11:17 iscolored
-rw-r--r-- 1 mcc users 166K May 24 11:17 model.pnml
=====================================================================
Generated by BenchKit 2-3637
Executing tool itstools
Input is MAPKbis-PT-5320, examination is ReachabilityFireability
Time confinement is 3600 seconds
Memory confinement is 16384 MBytes
Number of cores is 4
Run identifier is r284-csrt-152749174900306
=====================================================================

--------------------
content from stdout:

=== Data for post analysis generated by BenchKit (invocation template)

The expected result is a vector of booleans
BOOL_VECTOR

here is the order used to build the result vector(from text file)
FORMULA_NAME MAPKbis-PT-5320-ReachabilityFireability-00
FORMULA_NAME MAPKbis-PT-5320-ReachabilityFireability-01
FORMULA_NAME MAPKbis-PT-5320-ReachabilityFireability-02
FORMULA_NAME MAPKbis-PT-5320-ReachabilityFireability-03
FORMULA_NAME MAPKbis-PT-5320-ReachabilityFireability-04
FORMULA_NAME MAPKbis-PT-5320-ReachabilityFireability-05
FORMULA_NAME MAPKbis-PT-5320-ReachabilityFireability-06
FORMULA_NAME MAPKbis-PT-5320-ReachabilityFireability-07
FORMULA_NAME MAPKbis-PT-5320-ReachabilityFireability-08
FORMULA_NAME MAPKbis-PT-5320-ReachabilityFireability-09
FORMULA_NAME MAPKbis-PT-5320-ReachabilityFireability-10
FORMULA_NAME MAPKbis-PT-5320-ReachabilityFireability-11
FORMULA_NAME MAPKbis-PT-5320-ReachabilityFireability-12
FORMULA_NAME MAPKbis-PT-5320-ReachabilityFireability-13
FORMULA_NAME MAPKbis-PT-5320-ReachabilityFireability-14
FORMULA_NAME MAPKbis-PT-5320-ReachabilityFireability-15

=== Now, execution of the tool begins

BK_START 1527926862019

Using solver Z3 to compute partial order matrices.
Built C files in :
/home/mcc/execution
Invoking ITS tools like this :CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.201805151631/bin/its-reach-linux64, --gc-threshold, 2000000, --quiet, -i, /home/mcc/execution/ReachabilityFireability.pnml.gal, -t, CGAL, -reachable-file, ReachabilityFireability.prop, --nowitness], workingDir=/home/mcc/execution]

its-reach command run as :

/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.201805151631/bin/its-reach-linux64 --gc-threshold 2000000 --quiet -i /home/mcc/execution/ReachabilityFireability.pnml.gal -t CGAL -reachable-file ReachabilityFireability.prop --nowitness
Loading property file ReachabilityFireability.prop.
Read [reachable] property : MAPKbis-PT-5320-ReachabilityFireability-00 with value :(((MAP3K1_3_equals_0>=1)&&(RAS_equals_1>=1))||((AP1_equals_1>=1)&&(MEK1_2_equals_1>=1)))
Read [reachable] property : MAPKbis-PT-5320-ReachabilityFireability-01 with value :((((ATM_equals_0>=1)&&(MDM2_equals_0>=1))&&(p38_equals_1>=1))&&(p53_equals_0>=1))
Read [invariant] property : MAPKbis-PT-5320-ReachabilityFireability-02 with value :((!((AKT_equals_1>=1)&&(RAF_equals_1>=1)))||((((((CREB_equals_0>=1)&&(ELK1_equals_1>=1))&&(ERK_equals_1>=1))&&(FOS_equals_0>=1))&&(RSK_equals_1>=1))||((((ERK_equals_0>=1)&&(SPRY_equals_1>=1))||((Apoptosis_equals_1>=1)&&(FOXO3_equals_0>=1)))&&(((((AKT_0>=1)&&(ERK_equals_0>=1))&&(RAF_equals_0>=1))&&(RAS_equals_1>=1))&&((EGFR_equals_1>=1)&&(GRB2_equals_0>=1))))))
Read [invariant] property : MAPKbis-PT-5320-ReachabilityFireability-03 with value :(!(((((((AKT_0>=1)&&(ERK_equals_0>=1))&&(PKC_equals_1>=1))&&(RAF_equals_0>=1))||((FOS_equals_1>=1)&&(RSK_equals_0>=1)))&&(((Proliferation_equals_1>=1)&&(p70_equals_0>=1))&&((RAS_equals_0>=1)&&(SOS_equals_1>=1))))||(((GAB1_equals_0>=1)&&(PI3K_equals_1>=1))&&(RAS_equals_0>=1))))
Read [reachable] property : MAPKbis-PT-5320-ReachabilityFireability-04 with value :(!((!(((FGFR3_equals_0>=1)&&(FRS2_equals_1>=1))||((PDK1_equals_0>=1)&&(p70_equals_1>=1))))||((((SMAD_equals_1>=1)&&(TGFBR_equals_0>=1))&&((FOS_equals_1>=1)&&(RSK_equals_0>=1)))&&((((((Apoptosis_equals_0>=1)&&(BCL2_equals_0>=1))&&(ERK_equals_0>=1))&&(FOXO3_equals_1>=1))&&(p53_equals_1>=1))||((MSK_equals_0>=1)&&(p38_equals_1>=1))))))
Read [reachable] property : MAPKbis-PT-5320-ReachabilityFireability-05 with value :((ERK_equals_0>=1)&&(MEK1_2_equals_1>=1))
Read [reachable] property : MAPKbis-PT-5320-ReachabilityFireability-06 with value :(((((DUSP1_equals_1>=1)&&(MAP3K1_3_equals_1>=1))&&(TAOK_equals_1>=1))&&(p38_equals_0>=1))||((Apoptosis_equals_1>=1)&&(FOXO3_equals_0>=1)))
Read [reachable] property : MAPKbis-PT-5320-ReachabilityFireability-07 with value :((!((!((GADD45_equals_0>=1)&&(MTK1_equals_1>=1)))&&((ATF2_equals_0>=1)&&(JNK_equals_1>=1))))&&(((MSK_equals_0>=1)&&(p38_equals_1>=1))&&(((((DUSP1_equals_0>=1)&&(TAOK_equals_1>=1))&&(p38_equals_0>=1))&&(((AKT_0>=1)&&(FOXO3_equals_0>=1))&&(JNK_equals_1>=1)))||((AKT_equals_1>=1)&&(PTEN_equals_1>=1)))))
Read [invariant] property : MAPKbis-PT-5320-ReachabilityFireability-08 with value :(!(((((DUSP1_equals_1>=1)&&(MAP3K1_3_equals_0>=1))&&(MTK1_equals_0>=1))&&(TAOK_equals_0>=1))&&(p38_equals_1>=1)))
Read [reachable] property : MAPKbis-PT-5320-ReachabilityFireability-09 with value :(((((DUSP1_equals_1>=1)&&(MAP3K1_3_equals_0>=1))&&(MTK1_equals_1>=1))&&(TAK1_equals_1>=1))&&(p38_equals_0>=1))
Read [reachable] property : MAPKbis-PT-5320-ReachabilityFireability-10 with value :(!((!(((AKT_0>=1)&&(PDK1_equals_1>=1))&&(PTEN_equals_0>=1)))&&(!(((MAP3K1_3_equals_0>=1)&&(RAS_equals_1>=1))&&(((DUSP1_equals_0>=1)&&(JNK_equals_0>=1))&&(TAOK_equals_1>=1))))))
Read [invariant] property : MAPKbis-PT-5320-ReachabilityFireability-11 with value :((!((BCL2_equals_1>=1)&&(CREB_equals_0>=1)))&&(!((Apoptosis_equals_1>=1)&&(FOXO3_equals_0>=1))))
Read [reachable] property : MAPKbis-PT-5320-ReachabilityFireability-12 with value :((FRS2_equals_1>=1)&&(GRB2_equals_0>=1))
Read [reachable] property : MAPKbis-PT-5320-ReachabilityFireability-13 with value :(((RAS_equals_0>=1)&&(SOS_equals_1>=1))||((((DUSP1_equals_0>=1)&&(TAOK_equals_1>=1))&&(p38_equals_0>=1))&&((MAX_equals_0>=1)&&(p38_equals_1>=1))))
Read [reachable] property : MAPKbis-PT-5320-ReachabilityFireability-14 with value :(((((DUSP1_equals_1>=1)&&(MAP3K1_3_equals_0>=1))&&(MTK1_equals_1>=1))&&(TAOK_equals_1>=1))&&(p38_equals_0>=1))
Read [reachable] property : MAPKbis-PT-5320-ReachabilityFireability-15 with value :(((PDK1_equals_1>=1)&&(PI3K_equals_0>=1))&&(!((((((DUSP1_equals_1>=1)&&(MAP3K1_3_equals_0>=1))&&(MTK1_equals_0>=1))&&(TAK1_equals_1>=1))&&(TAOK_equals_1>=1))&&(p38_equals_0>=1))))
Model ,|S| ,Time ,Mem(kb) ,fin. SDD ,fin. DDD ,peak SDD ,peak DDD ,SDD Hom ,SDD cache peak ,DDD Hom ,DDD cachepeak ,SHom cache
MAPKbis\_PT\_5320\_flat\_flat,8.12646e+06,0.216875,7124,2,247,5,15136,6,0,555,11428,0
Total reachable state count : 8126465

Verifying 16 reachability properties.
Reachability property MAPKbis-PT-5320-ReachabilityFireability-00 does not hold.
FORMULA MAPKbis-PT-5320-ReachabilityFireability-00 FALSE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL COLLATERAL_PROCESSING
No reachable states exhibit your property : MAPKbis-PT-5320-ReachabilityFireability-00

Model ,|S| ,Time ,Mem(kb) ,fin. SDD ,fin. DDD ,peak SDD ,peak DDD ,SDD Hom ,SDD cache peak ,DDD Hom ,DDD cachepeak ,SHom cache
MAPKbis-PT-5320-ReachabilityFireability-00,0,0.217663,7160,1,0,5,15136,7,0,559,11428,0
Reachability property MAPKbis-PT-5320-ReachabilityFireability-01 does not hold.
FORMULA MAPKbis-PT-5320-ReachabilityFireability-01 FALSE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL COLLATERAL_PROCESSING
No reachable states exhibit your property : MAPKbis-PT-5320-ReachabilityFireability-01

Model ,|S| ,Time ,Mem(kb) ,fin. SDD ,fin. DDD ,peak SDD ,peak DDD ,SDD Hom ,SDD cache peak ,DDD Hom ,DDD cachepeak ,SHom cache
MAPKbis-PT-5320-ReachabilityFireability-01,0,0.218182,7336,1,0,5,15136,8,0,566,11428,0
Invariant property MAPKbis-PT-5320-ReachabilityFireability-02 is true.
FORMULA MAPKbis-PT-5320-ReachabilityFireability-02 TRUE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL COLLATERAL_PROCESSING

Model ,|S| ,Time ,Mem(kb) ,fin. SDD ,fin. DDD ,peak SDD ,peak DDD ,SDD Hom ,SDD cache peak ,DDD Hom ,DDD cachepeak ,SHom cache
MAPKbis-PT-5320-ReachabilityFireability-02,0,0.219889,7464,1,0,5,15136,9,0,595,11428,0
Invariant property MAPKbis-PT-5320-ReachabilityFireability-03 is true.
FORMULA MAPKbis-PT-5320-ReachabilityFireability-03 TRUE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL COLLATERAL_PROCESSING

Model ,|S| ,Time ,Mem(kb) ,fin. SDD ,fin. DDD ,peak SDD ,peak DDD ,SDD Hom ,SDD cache peak ,DDD Hom ,DDD cachepeak ,SHom cache
MAPKbis-PT-5320-ReachabilityFireability-03,0,0.221224,7528,1,0,5,15136,10,0,604,11428,0
Reachability property MAPKbis-PT-5320-ReachabilityFireability-04 does not hold.
FORMULA MAPKbis-PT-5320-ReachabilityFireability-04 FALSE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL COLLATERAL_PROCESSING
No reachable states exhibit your property : MAPKbis-PT-5320-ReachabilityFireability-04

Model ,|S| ,Time ,Mem(kb) ,fin. SDD ,fin. DDD ,peak SDD ,peak DDD ,SDD Hom ,SDD cache peak ,DDD Hom ,DDD cachepeak ,SHom cache
MAPKbis-PT-5320-ReachabilityFireability-04,0,0.238981,7528,1,0,5,15136,11,0,628,11428,0
Reachability property MAPKbis-PT-5320-ReachabilityFireability-05 does not hold.
FORMULA MAPKbis-PT-5320-ReachabilityFireability-05 FALSE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL COLLATERAL_PROCESSING
No reachable states exhibit your property : MAPKbis-PT-5320-ReachabilityFireability-05

Model ,|S| ,Time ,Mem(kb) ,fin. SDD ,fin. DDD ,peak SDD ,peak DDD ,SDD Hom ,SDD cache peak ,DDD Hom ,DDD cachepeak ,SHom cache
MAPKbis-PT-5320-ReachabilityFireability-05,0,0.239372,7528,1,0,5,15136,12,0,629,11428,0
Reachability property MAPKbis-PT-5320-ReachabilityFireability-06 is true.
FORMULA MAPKbis-PT-5320-ReachabilityFireability-06 TRUE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL COLLATERAL_PROCESSING

Model ,|S| ,Time ,Mem(kb) ,fin. SDD ,fin. DDD ,peak SDD ,peak DDD ,SDD Hom ,SDD cache peak ,DDD Hom ,DDD cachepeak ,SHom cache
MAPKbis-PT-5320-ReachabilityFireability-06,64,0.239927,7528,2,116,6,15136,13,0,635,11428,0
Reachability property MAPKbis-PT-5320-ReachabilityFireability-07 does not hold.
FORMULA MAPKbis-PT-5320-ReachabilityFireability-07 FALSE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL COLLATERAL_PROCESSING
No reachable states exhibit your property : MAPKbis-PT-5320-ReachabilityFireability-07

Model ,|S| ,Time ,Mem(kb) ,fin. SDD ,fin. DDD ,peak SDD ,peak DDD ,SDD Hom ,SDD cache peak ,DDD Hom ,DDD cachepeak ,SHom cache
MAPKbis-PT-5320-ReachabilityFireability-07,0,0.241321,7528,1,0,6,15136,14,0,658,11428,0
Invariant property MAPKbis-PT-5320-ReachabilityFireability-08 does not hold.
FORMULA MAPKbis-PT-5320-ReachabilityFireability-08 FALSE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL COLLATERAL_PROCESSING

Model ,|S| ,Time ,Mem(kb) ,fin. SDD ,fin. DDD ,peak SDD ,peak DDD ,SDD Hom ,SDD cache peak ,DDD Hom ,DDD cachepeak ,SHom cache
MAPKbis-PT-5320-ReachabilityFireability-08,1024,0.241858,7528,2,128,7,15136,15,0,666,11428,0
Reachability property MAPKbis-PT-5320-ReachabilityFireability-09 does not hold.
FORMULA MAPKbis-PT-5320-ReachabilityFireability-09 FALSE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL COLLATERAL_PROCESSING
No reachable states exhibit your property : MAPKbis-PT-5320-ReachabilityFireability-09

Model ,|S| ,Time ,Mem(kb) ,fin. SDD ,fin. DDD ,peak SDD ,peak DDD ,SDD Hom ,SDD cache peak ,DDD Hom ,DDD cachepeak ,SHom cache
MAPKbis-PT-5320-ReachabilityFireability-09,0,0.242299,7528,1,0,7,15136,16,0,667,11428,0
Reachability property MAPKbis-PT-5320-ReachabilityFireability-10 does not hold.
FORMULA MAPKbis-PT-5320-ReachabilityFireability-10 FALSE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL COLLATERAL_PROCESSING
No reachable states exhibit your property : MAPKbis-PT-5320-ReachabilityFireability-10

Model ,|S| ,Time ,Mem(kb) ,fin. SDD ,fin. DDD ,peak SDD ,peak DDD ,SDD Hom ,SDD cache peak ,DDD Hom ,DDD cachepeak ,SHom cache
MAPKbis-PT-5320-ReachabilityFireability-10,0,0.243016,7528,1,0,7,15136,17,0,670,11428,0
Invariant property MAPKbis-PT-5320-ReachabilityFireability-11 does not hold.
FORMULA MAPKbis-PT-5320-ReachabilityFireability-11 FALSE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL COLLATERAL_PROCESSING

Model ,|S| ,Time ,Mem(kb) ,fin. SDD ,fin. DDD ,peak SDD ,peak DDD ,SDD Hom ,SDD cache peak ,DDD Hom ,DDD cachepeak ,SHom cache
MAPKbis-PT-5320-ReachabilityFireability-11,64,0.243805,7528,2,116,7,15136,18,0,672,11428,0
Reachability property MAPKbis-PT-5320-ReachabilityFireability-12 does not hold.
FORMULA MAPKbis-PT-5320-ReachabilityFireability-12 FALSE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL COLLATERAL_PROCESSING
No reachable states exhibit your property : MAPKbis-PT-5320-ReachabilityFireability-12

Model ,|S| ,Time ,Mem(kb) ,fin. SDD ,fin. DDD ,peak SDD ,peak DDD ,SDD Hom ,SDD cache peak ,DDD Hom ,DDD cachepeak ,SHom cache
MAPKbis-PT-5320-ReachabilityFireability-12,0,0.244073,7528,1,0,7,15136,19,0,673,11428,0
Reachability property MAPKbis-PT-5320-ReachabilityFireability-13 does not hold.
FORMULA MAPKbis-PT-5320-ReachabilityFireability-13 FALSE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL COLLATERAL_PROCESSING
No reachable states exhibit your property : MAPKbis-PT-5320-ReachabilityFireability-13

Model ,|S| ,Time ,Mem(kb) ,fin. SDD ,fin. DDD ,peak SDD ,peak DDD ,SDD Hom ,SDD cache peak ,DDD Hom ,DDD cachepeak ,SHom cache
MAPKbis-PT-5320-ReachabilityFireability-13,0,0.244707,7528,1,0,7,15136,20,0,680,11428,0
Reachability property MAPKbis-PT-5320-ReachabilityFireability-14 is true.
FORMULA MAPKbis-PT-5320-ReachabilityFireability-14 TRUE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL COLLATERAL_PROCESSING

Model ,|S| ,Time ,Mem(kb) ,fin. SDD ,fin. DDD ,peak SDD ,peak DDD ,SDD Hom ,SDD cache peak ,DDD Hom ,DDD cachepeak ,SHom cache
MAPKbis-PT-5320-ReachabilityFireability-14,1024,0.245145,7528,2,128,8,15136,21,0,683,11428,0
Reachability property MAPKbis-PT-5320-ReachabilityFireability-15 does not hold.
FORMULA MAPKbis-PT-5320-ReachabilityFireability-15 FALSE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL COLLATERAL_PROCESSING
No reachable states exhibit your property : MAPKbis-PT-5320-ReachabilityFireability-15

Model ,|S| ,Time ,Mem(kb) ,fin. SDD ,fin. DDD ,peak SDD ,peak DDD ,SDD Hom ,SDD cache peak ,DDD Hom ,DDD cachepeak ,SHom cache
MAPKbis-PT-5320-ReachabilityFireability-15,0,0.24587,7528,1,0,8,15136,22,0,696,11428,0
Running compilation step : CommandLine [args=[gcc, -c, -I/home/mcc/BenchKit//lts_install_dir//include, -I., -std=c99, -fPIC, -O3, model.c], workingDir=/home/mcc/execution]
WARNING : LTS min runner thread was asked to interrupt. Dying gracefully.

BK_STOP 1527926866783

--------------------
content from stderr:

+ export BINDIR=/home/mcc/BenchKit/
+ BINDIR=/home/mcc/BenchKit/
++ pwd
+ export MODEL=/home/mcc/execution
+ MODEL=/home/mcc/execution
+ /home/mcc/BenchKit//runeclipse.sh /home/mcc/execution ReachabilityFireability -its -ltsminpath /home/mcc/BenchKit//lts_install_dir/ -smt
+ ulimit -s 65536
+ [[ -z '' ]]
+ export LTSMIN_MEM_SIZE=8589934592
+ LTSMIN_MEM_SIZE=8589934592
+ /home/mcc/BenchKit//itstools/its-tools -consoleLog -data /home/mcc/execution/workspace -pnfolder /home/mcc/execution -examination ReachabilityFireability -z3path /home/mcc/BenchKit//z3/bin/z3 -yices2path /home/mcc/BenchKit//yices/bin/yices -its -ltsminpath /home/mcc/BenchKit//lts_install_dir/ -smt -vmargs -Dosgi.locking=none -Declipse.stateSaveDelayInterval=-1 -Dosgi.configuration.area=/tmp/.eclipse -Xss8m -Xms40m -Xmx8192m -Dfile.encoding=UTF-8 -Dosgi.requiredJavaVersion=1.6
Jun 02, 2018 8:07:44 AM fr.lip6.move.gal.application.Application start
INFO: Running its-tools with arguments : [-pnfolder, /home/mcc/execution, -examination, ReachabilityFireability, -z3path, /home/mcc/BenchKit//z3/bin/z3, -yices2path, /home/mcc/BenchKit//yices/bin/yices, -its, -ltsminpath, /home/mcc/BenchKit//lts_install_dir/, -smt]
Jun 02, 2018 8:07:44 AM fr.lip6.move.gal.application.MccTranslator transformPNML
INFO: Parsing pnml file : /home/mcc/execution/model.pnml
Jun 02, 2018 8:07:44 AM fr.lip6.move.gal.nupn.PTNetReader loadFromXML
INFO: Load time of PNML (sax parser for PT used): 65 ms
Jun 02, 2018 8:07:44 AM fr.lip6.move.gal.pnml.togal.PTGALTransformer handlePage
INFO: Transformed 106 places.
Jun 02, 2018 8:07:44 AM fr.lip6.move.gal.pnml.togal.PTGALTransformer handlePage
INFO: Transformed 173 transitions.
Jun 02, 2018 8:07:44 AM fr.lip6.move.serialization.SerializationUtil systemToFile
INFO: Time to serialize gal into /home/mcc/execution/model.pnml.img.gal : 19 ms
Jun 02, 2018 8:07:44 AM fr.lip6.move.gal.instantiate.DomainAnalyzer computeVariableDomains
INFO: Found a total of 8 fixed domain variables (out of 106 variables) in GAL type MAPKbis_PT_5320
Jun 02, 2018 8:07:44 AM fr.lip6.move.gal.instantiate.Simplifier printConstantVars
INFO: Found a total of 8 constant array cells/variables (out of 106 variables) in type MAPKbis_PT_5320
Jun 02, 2018 8:07:44 AM fr.lip6.move.gal.instantiate.Simplifier printConstantVars
INFO: DNA_damage_equals_0,DNA_damage_equals_1,EGFR_stimulus_equals_0,FGFR3_stimulus_equals_1,TGFBR_stimulus_equals_1,FGFR3_stimulus_equals_0,TGFBR_stimulus_equals_0,EGFR_stimulus_equals_1,
Jun 02, 2018 8:07:44 AM fr.lip6.move.gal.instantiate.Simplifier simplifyConstantVariables
INFO: Removed 8 constant variables :DNA_damage_equals_0=0, DNA_damage_equals_1=1, EGFR_stimulus_equals_0=1, FGFR3_stimulus_equals_1=0, TGFBR_stimulus_equals_1=0, FGFR3_stimulus_equals_0=1, TGFBR_stimulus_equals_0=1, EGFR_stimulus_equals_1=0
Jun 02, 2018 8:07:44 AM fr.lip6.move.gal.instantiate.Simplifier simplifyConstantVariables
INFO: Simplified 9 expressions due to constant valuations.
Jun 02, 2018 8:07:44 AM fr.lip6.move.gal.instantiate.Simplifier simplifyFalseTransitions
INFO: Removed 4 false transitions.
Jun 02, 2018 8:07:44 AM fr.lip6.move.gal.instantiate.GALRewriter flatten
INFO: Flatten gal took : 112 ms
Jun 02, 2018 8:07:44 AM fr.lip6.move.gal.instantiate.GALRewriter flatten
INFO: Flatten gal took : 32 ms
Jun 02, 2018 8:07:44 AM fr.lip6.move.serialization.SerializationUtil systemToFile
INFO: Time to serialize gal into /home/mcc/execution/ReachabilityFireability.pnml.gal : 3 ms
Jun 02, 2018 8:07:44 AM fr.lip6.move.serialization.SerializationUtil serializePropertiesForITSTools
INFO: Time to serialize properties into /home/mcc/execution/ReachabilityFireability.prop : 3 ms
Jun 02, 2018 8:07:44 AM fr.lip6.move.gal.instantiate.GALRewriter flatten
INFO: Flatten gal took : 45 ms
Jun 02, 2018 8:07:45 AM fr.lip6.move.gal.semantics.DeterministicNextBuilder getDeterministicNext
INFO: Input system was already deterministic with 169 transitions.
Jun 02, 2018 8:07:45 AM fr.lip6.move.gal.semantics.DeterministicNextBuilder getDeterministicNext
INFO: Input system was already deterministic with 169 transitions.
Jun 02, 2018 8:07:45 AM org.smtlib.impl.Script execute
WARNING: Script execution failed on command (declare-fun s () (Array Int (Array Int Int))) with error (error "Error writing to Z3 solver: java.io.IOException: Stream closed")
Skipping mayMatrices nes/nds Error when declaring system variables to SMT solver.(error "Error writing to Z3 solver: java.io.IOException: Stream closed")
java.lang.RuntimeException: Error when declaring system variables to SMT solver.(error "Error writing to Z3 solver: java.io.IOException: Stream closed")
at fr.lip6.move.gal.gal2smt.bmc.NextBMCSolver.init(NextBMCSolver.java:93)
at fr.lip6.move.gal.gal2smt.bmc.KInductionSolver.init(KInductionSolver.java:59)
at fr.lip6.move.gal.gal2smt.bmc.NecessaryEnablingsolver.init(NecessaryEnablingsolver.java:71)
at fr.lip6.move.gal.gal2pins.Gal2PinsTransformerNext.printLabels(Gal2PinsTransformerNext.java:471)
at fr.lip6.move.gal.gal2pins.Gal2PinsTransformerNext.printDependencyMatrix(Gal2PinsTransformerNext.java:209)
at fr.lip6.move.gal.gal2pins.Gal2PinsTransformerNext.buildBodyFile(Gal2PinsTransformerNext.java:85)
at fr.lip6.move.gal.gal2pins.Gal2PinsTransformerNext.transform(Gal2PinsTransformerNext.java:830)
at fr.lip6.move.gal.application.LTSminRunner$1.run(LTSminRunner.java:71)
at java.lang.Thread.run(Thread.java:748)
Jun 02, 2018 8:07:45 AM fr.lip6.move.gal.gal2pins.Gal2PinsTransformerNext transform
INFO: Built C files in 417ms conformant to PINS in folder :/home/mcc/execution
Jun 02, 2018 8:07:46 AM fr.lip6.move.gal.gal2smt.Gal2SMTFrontEnd checkProperties
INFO: Ran tautology test, simplified 0 / 0 in 1023 ms.
Jun 02, 2018 8:07:46 AM fr.lip6.move.gal.gal2smt.Gal2SMTFrontEnd checkProperties
WARNING: Interrupting SMT solver.
Jun 02, 2018 8:07:46 AM fr.lip6.move.gal.application.SMTRunner$2 run
INFO: SMT solved 0/ 16 properties. Interrupting other analysis methods.

Sequence of Actions to be Executed by the VM

This is useful if one wants to reexecute the tool in the VM from the submitted image disk.

set -x
# this is for BenchKit: configuration of major elements for the test
export BK_INPUT="MAPKbis-PT-5320"
export BK_EXAMINATION="ReachabilityFireability"
export BK_TOOL="itstools"
export BK_RESULT_DIR="/tmp/BK_RESULTS/OUTPUTS"
export BK_TIME_CONFINEMENT="3600"
export BK_MEMORY_CONFINEMENT="16384"

# this is specific to your benchmark or test

export BIN_DIR="$HOME/BenchKit/bin"

# remove the execution directoty if it exists (to avoid increse of .vmdk images)
if [ -d execution ] ; then
rm -rf execution
fi

tar xzf /home/mcc/BenchKit/INPUTS/MAPKbis-PT-5320.tgz
mv MAPKbis-PT-5320 execution
cd execution
pwd
ls -lh

# this is for BenchKit: explicit launching of the test
echo "====================================================================="
echo " Generated by BenchKit 2-3637"
echo " Executing tool itstools"
echo " Input is MAPKbis-PT-5320, examination is ReachabilityFireability"
echo " Time confinement is $BK_TIME_CONFINEMENT seconds"
echo " Memory confinement is 16384 MBytes"
echo " Number of cores is 4"
echo " Run identifier is r284-csrt-152749174900306"
echo "====================================================================="
echo
echo "--------------------"
echo "content from stdout:"
echo
echo "=== Data for post analysis generated by BenchKit (invocation template)"
echo
if [ "ReachabilityFireability" = "UpperBounds" ] ; then
echo "The expected result is a vector of positive values"
echo NUM_VECTOR
elif [ "ReachabilityFireability" != "StateSpace" ] ; then
echo "The expected result is a vector of booleans"
echo BOOL_VECTOR
else
echo "no data necessary for post analysis"
fi
echo
if [ -f "ReachabilityFireability.txt" ] ; then
echo "here is the order used to build the result vector(from text file)"
for x in $(grep Property ReachabilityFireability.txt | cut -d ' ' -f 2 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ -f "ReachabilityFireability.xml" ] ; then # for cunf (txt files deleted;-)
echo echo "here is the order used to build the result vector(from xml file)"
for x in $(grep '' ReachabilityFireability.xml | cut -d '>' -f 2 | cut -d '<' -f 1 | sort -u) ; do
echo "FORMULA_NAME $x"
done
fi
echo
echo "=== Now, execution of the tool begins"
echo
echo -n "BK_START "
date -u +%s%3N
echo
timeout -s 9 $BK_TIME_CONFINEMENT bash -c "/home/mcc/BenchKit/BenchKit_head.sh 2> STDERR ; echo ; echo -n \"BK_STOP \" ; date -u +%s%3N"
if [ $? -eq 137 ] ; then
echo
echo "BK_TIME_CONFINEMENT_REACHED"
fi
echo
echo "--------------------"
echo "content from stderr:"
echo
cat STDERR ;