Execution Chart

We display below the execution chart for this examination (boot time has been removed).

Trace from the execution

Waiting for the VM to be ready (probing ssh)
................................................................
/home/mcc/execution
total 200K
-rw-r--r-- 1 mcc users 3.5K May 15 18:54 CTLCardinality.txt
-rw-r--r-- 1 mcc users 19K May 15 18:54 CTLCardinality.xml
-rw-r--r-- 1 mcc users 2.8K May 15 18:54 CTLFireability.txt
-rw-r--r-- 1 mcc users 14K May 15 18:54 CTLFireability.xml
-rw-r--r-- 1 mcc users 4.0K May 15 18:50 GenericPropertiesDefinition.xml
-rw-r--r-- 1 mcc users 5.7K May 15 18:50 GenericPropertiesVerdict.xml
-rw-r--r-- 1 mcc users 2.4K May 26 09:26 LTLCardinality.txt
-rw-r--r-- 1 mcc users 9.5K May 26 09:26 LTLCardinality.xml
-rw-r--r-- 1 mcc users 2.1K May 26 09:26 LTLFireability.txt
-rw-r--r-- 1 mcc users 7.9K May 26 09:26 LTLFireability.xml
-rw-r--r-- 1 mcc users 4.1K May 15 18:54 ReachabilityCardinality.txt
-rw-r--r-- 1 mcc users 22K May 15 18:54 ReachabilityCardinality.xml
-rw-r--r-- 1 mcc users 115 May 15 18:54 ReachabilityDeadlock.txt
-rw-r--r-- 1 mcc users 353 May 15 18:54 ReachabilityDeadlock.xml
-rw-r--r-- 1 mcc users 4.1K May 15 18:54 ReachabilityFireability.txt
-rw-r--r-- 1 mcc users 21K May 15 18:54 ReachabilityFireability.xml
-rw-r--r-- 1 mcc users 1.7K May 15 18:54 UpperBounds.txt
-rw-r--r-- 1 mcc users 3.8K May 15 18:54 UpperBounds.xml
-rw-r--r-- 1 mcc users 6 May 15 18:50 equiv_col
-rw-r--r-- 1 mcc users 17 May 15 18:50 instance
-rw-r--r-- 1 mcc users 6 May 15 18:50 iscolored
-rw-r--r-- 1 mcc users 21K May 15 18:50 model.pnml
=====================================================================
Generated by BenchKit 2-3637
Executing tool irma4mcc-structural
Input is GPPP-PT-C0100N0000010000, examination is LTLCardinality
Time confinement is 3600 seconds
Memory confinement is 16384 MBytes
Number of cores is 4
Run identifier is r247-blw7-152732549100093
=====================================================================

--------------------
content from stdout:

=== Data for post analysis generated by BenchKit (invocation template)

The expected result is a vector of booleans
BOOL_VECTOR

here is the order used to build the result vector(from text file)
FORMULA_NAME GPPP-PT-C0100N0000010000-LTLCardinality-00
FORMULA_NAME GPPP-PT-C0100N0000010000-LTLCardinality-01
FORMULA_NAME GPPP-PT-C0100N0000010000-LTLCardinality-02
FORMULA_NAME GPPP-PT-C0100N0000010000-LTLCardinality-03
FORMULA_NAME GPPP-PT-C0100N0000010000-LTLCardinality-04
FORMULA_NAME GPPP-PT-C0100N0000010000-LTLCardinality-05
FORMULA_NAME GPPP-PT-C0100N0000010000-LTLCardinality-06
FORMULA_NAME GPPP-PT-C0100N0000010000-LTLCardinality-07
FORMULA_NAME GPPP-PT-C0100N0000010000-LTLCardinality-08
FORMULA_NAME GPPP-PT-C0100N0000010000-LTLCardinality-09
FORMULA_NAME GPPP-PT-C0100N0000010000-LTLCardinality-10
FORMULA_NAME GPPP-PT-C0100N0000010000-LTLCardinality-11
FORMULA_NAME GPPP-PT-C0100N0000010000-LTLCardinality-12
FORMULA_NAME GPPP-PT-C0100N0000010000-LTLCardinality-13
FORMULA_NAME GPPP-PT-C0100N0000010000-LTLCardinality-14
FORMULA_NAME GPPP-PT-C0100N0000010000-LTLCardinality-15

=== Now, execution of the tool begins

BK_START 1527947580019


BK_STOP 1527947591037

--------------------
content from stderr:

Prefix is 75f5f979.
Reading known information in /usr/share/mcc4mcc/75f5f979-known.json.
Reading learned information in /usr/share/mcc4mcc/75f5f979-learned.json.
Reading value translations in /usr/share/mcc4mcc/75f5f979-values.json.
Using directory /home/mcc/execution for input, as it contains a model.pnml file.
Using GPPP-PT-C0100N0000010000 as instance name.
Using GPPP as model name.
Using algorithm or tool bmdt.
Model characteristics are: {'Examination': 'LTLCardinality', 'Place/Transition': True, 'Colored': False, 'Relative-Time': 1, 'Relative-Memory': 1, 'Ordinary': False, 'Simple Free Choice': False, 'Extended Free Choice': False, 'State Machine': False, 'Marked Graph': False, 'Connected': True, 'Strongly Connected': True, 'Source Place': False, 'Sink Place': False, 'Source Transition': False, 'Sink Transition': False, 'Loop Free': True, 'Conservative': False, 'Sub-Conservative': False, 'Nested Units': False, 'Safe': False, 'Deadlock': None, 'Reversible': None, 'Quasi Live': True, 'Live': None}.
Known tools are: [{'Time': 455273, 'Memory': 1103.43, 'Tool': 'itstools'}, {'Time': 455571, 'Memory': 1134.53, 'Tool': 'itstools'}, {'Time': 727134, 'Memory': 15950.97, 'Tool': 'lola'}, {'Time': 731209, 'Memory': 15951.76, 'Tool': 'lola'}].
Learned tools are: [{'Tool': 'lola'}].
Learned tool lola is 1.5971384202445567x far from the best tool itstools.
LTLCardinality itstools GPPP-PT-C0100N0000010000...
Jun 02, 2018 1:53:05 PM fr.lip6.move.gal.application.Application start
INFO: Running its-tools with arguments : [-z3path, /usr/bin/z3, -yices2path, /usr/bin/yices, -ltsminpath, /usr/bin, -smt, -its, -pnfolder, /mcc-data, -examination, LTLCardinality]
Jun 02, 2018 1:53:05 PM fr.lip6.move.gal.application.MccTranslator transformPNML
INFO: Parsing pnml file : /mcc-data/model.pnml
Jun 02, 2018 1:53:05 PM fr.lip6.move.gal.nupn.PTNetReader loadFromXML
INFO: Load time of PNML (sax parser for PT used): 19 ms
Jun 02, 2018 1:53:05 PM fr.lip6.move.gal.pnml.togal.PTGALTransformer handlePage
INFO: Transformed 33 places.
Jun 02, 2018 1:53:06 PM fr.lip6.move.gal.pnml.togal.PTGALTransformer handlePage
INFO: Transformed 22 transitions.
Jun 02, 2018 1:53:06 PM fr.lip6.move.serialization.SerializationUtil systemToFile
INFO: Time to serialize gal into /mcc-data/model.pnml.img.gal : 3 ms
Jun 02, 2018 1:53:06 PM fr.lip6.move.gal.instantiate.GALRewriter flatten
INFO: Flatten gal took : 33 ms
Using solver Z3 to compute partial order matrices.
Jun 02, 2018 1:53:06 PM fr.lip6.move.serialization.SerializationUtil systemToFile
INFO: Time to serialize gal into /mcc-data/LTLCardinality.pnml.gal : 1 ms
Jun 02, 2018 1:53:06 PM fr.lip6.move.serialization.SerializationUtil serializePropertiesForITSLTLTools
INFO: Time to serialize properties into /mcc-data/LTLCardinality.ltl : 2 ms
Built C files in :
/mcc-data
Jun 02, 2018 1:53:06 PM fr.lip6.move.gal.semantics.DeterministicNextBuilder getDeterministicNext
INFO: Input system was already deterministic with 22 transitions.
Invoking ITS tools like this :CommandLine [args=[/usr/share/itscl/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.201804131302/bin/its-ltl-linux64, --gc-threshold, 2000000, -i, /mcc-data/LTLCardinality.pnml.gal, -t, CGAL, -LTL, /mcc-data/LTLCardinality.ltl, -c, -stutter-deadlock], workingDir=/mcc-data]

its-ltl command run as :

/usr/share/itscl/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.201804131302/bin/its-ltl-linux64 --gc-threshold 2000000 -i /mcc-data/LTLCardinality.pnml.gal -t CGAL -LTL /mcc-data/LTLCardinality.ltl -c -stutter-deadlock
Read 16 LTL properties
Checking formula 0 : !(("(GAP>=3)"))
Formula 0 simplified : !"(GAP>=3)"
terminate called after throwing an instance of 'char const*'
ITS-tools command line returned an error code 134
Presburger conditions satisfied. Using coverability to approximate state space in K-Induction.
// Phase 1: matrix 22 rows 33 cols
invariant :c1 + c2 = 700
invariant :NADplus + _1_3_BPG + _3PG + _2PG + PEP + Pyr = 20000
invariant :Pi + _1_3_BPG + _3PG + _2PG + PEP + Pyr + 700'start + Lac = 700
invariant :-302'Ru5P + 751'Xu5P + -210902'R5P + -210151'S7P + -451'E4P + 300'F6P + -300'G6P + -300'_1_3_BPG + 300'ADP + 300'Pyr + 210000'start + 300'Lac + -2'b2 + 1053'a2 + -300'c2 = 210000
invariant :-2'Ru5P + 1051'Xu5P + -210602'R5P + -209851'S7P + 300'GAP + -151'E4P + 600'F6P + 600'FBP + 300'DHAP + -2'b2 + 1053'a2 + -300'c2 = 0
invariant :NADH + -1'_1_3_BPG + -1'_3PG + -1'_2PG + -1'PEP + -1'Pyr = 0
invariant :300'ATP + 302'Ru5P + -751'Xu5P + 210902'R5P + 210151'S7P + 451'E4P + -300'F6P + 300'G6P + 300'_1_3_BPG + -300'Pyr + -300'Lac + 2'b2 + -1053'a2 + 300'c2 = 12000000
invariant :4214'Ru5P + -4207'Xu5P + 1688414'R5P + 1684207'S7P + 4207'E4P + 4200'G6P + 2400'_1_3_BPG + 2400'_3PG + 2400'_2PG + 2400'PEP + 2400'Pyr + 1680000'start + 2400'Lac + 4200'Gluc + 14'b2 + -8421'a2 + 2400'c2 = 1680000
invariant :2'GSSG + GSH = 20000
invariant :b1 + b2 = 300
invariant :NADPplus + NADPH = 20000
invariant :a1 + a2 = 200
Jun 02, 2018 1:53:06 PM fr.lip6.move.gal.gal2smt.bmc.KInductionSolver computeAndDeclareInvariants
INFO: Computed 12 place invariants in 8 ms
Jun 02, 2018 1:53:06 PM fr.lip6.move.gal.gal2smt.bmc.KInductionSolver init
INFO: Proved 33 variables to be positive in 56 ms
Jun 02, 2018 1:53:06 PM fr.lip6.move.gal.gal2smt.bmc.NecessaryEnablingsolver computeAblingMatrix
INFO: Computing symmetric may disable matrix : 22 transitions.
Jun 02, 2018 1:53:06 PM fr.lip6.move.gal.gal2smt.bmc.NecessaryEnablingsolver printStats
INFO: Computation of disable matrix completed :0/22 took 0 ms. Total solver calls (SAT/UNSAT): 0(0/0)
Jun 02, 2018 1:53:06 PM fr.lip6.move.gal.gal2smt.bmc.NecessaryEnablingsolver printStats
INFO: Computation of Complete disable matrix. took 0 ms. Total solver calls (SAT/UNSAT): 0(0/0)
Jun 02, 2018 1:53:06 PM fr.lip6.move.gal.gal2smt.bmc.NecessaryEnablingsolver computeAblingMatrix
INFO: Computing symmetric may enable matrix : 22 transitions.
Jun 02, 2018 1:53:06 PM fr.lip6.move.gal.gal2smt.bmc.NecessaryEnablingsolver printStats
INFO: Computation of Complete enable matrix. took 0 ms. Total solver calls (SAT/UNSAT): 0(0/0)
Jun 02, 2018 1:53:06 PM fr.lip6.move.gal.gal2smt.bmc.NecessaryEnablingsolver computeCoEnablingMatrix
INFO: Computing symmetric co enabling matrix : 22 transitions.
Jun 02, 2018 1:53:07 PM fr.lip6.move.gal.gal2smt.bmc.NecessaryEnablingsolver printStats
INFO: Computation of Finished co-enabling matrix. took 892 ms. Total solver calls (SAT/UNSAT): 163(141/22)
Jun 02, 2018 1:53:07 PM fr.lip6.move.gal.gal2smt.bmc.NecessaryEnablingsolver computeDoNotAccord
INFO: Computing Do-Not-Accords matrix : 22 transitions.
Jun 02, 2018 1:53:09 PM fr.lip6.move.gal.gal2smt.bmc.NecessaryEnablingsolver printStats
INFO: Computation of Completed DNA matrix. took 1572 ms. Total solver calls (SAT/UNSAT): 44(0/44)
Jun 02, 2018 1:53:09 PM fr.lip6.move.gal.gal2pins.Gal2PinsTransformerNext transform
INFO: Built C files in 3111ms conformant to PINS in folder :/mcc-data
Running compilation step : CommandLine [args=[gcc, -c, -I/usr/bin/include, -I., -std=c99, -fPIC, -O3, model.c], workingDir=/mcc-data]
java.io.IOException: Cannot run program "gcc" (in directory "/mcc-data"): error=2, No such file or directory
at java.lang.ProcessBuilder.start(ProcessBuilder.java:1048)
at fr.lip6.move.gal.process.Runner.runTool(Runner.java:46)
at fr.lip6.move.gal.process.Runner.runTool(Runner.java:27)
at fr.lip6.move.gal.application.LTSminRunner.compilePINS(LTSminRunner.java:235)
at fr.lip6.move.gal.application.LTSminRunner.access$6(LTSminRunner.java:220)
at fr.lip6.move.gal.application.LTSminRunner$1.run(LTSminRunner.java:75)
at java.lang.Thread.run(Thread.java:748)
Caused by: java.io.IOException: error=2, No such file or directory
at java.lang.UNIXProcess.forkAndExec(Native Method)
at java.lang.UNIXProcess.(UNIXProcess.java:247)
at java.lang.ProcessImpl.start(ProcessImpl.java:134)
at java.lang.ProcessBuilder.start(ProcessBuilder.java:1029)
... 6 more

Sequence of Actions to be Executed by the VM

This is useful if one wants to reexecute the tool in the VM from the submitted image disk.

set -x
# this is for BenchKit: configuration of major elements for the test
export BK_INPUT="GPPP-PT-C0100N0000010000"
export BK_EXAMINATION="LTLCardinality"
export BK_TOOL="irma4mcc-structural"
export BK_RESULT_DIR="/tmp/BK_RESULTS/OUTPUTS"
export BK_TIME_CONFINEMENT="3600"
export BK_MEMORY_CONFINEMENT="16384"

# this is specific to your benchmark or test

export BIN_DIR="$HOME/BenchKit/bin"

# remove the execution directoty if it exists (to avoid increse of .vmdk images)
if [ -d execution ] ; then
rm -rf execution
fi

tar xzf /home/mcc/BenchKit/INPUTS/GPPP-PT-C0100N0000010000.tgz
mv GPPP-PT-C0100N0000010000 execution
cd execution
pwd
ls -lh

# this is for BenchKit: explicit launching of the test
echo "====================================================================="
echo " Generated by BenchKit 2-3637"
echo " Executing tool irma4mcc-structural"
echo " Input is GPPP-PT-C0100N0000010000, examination is LTLCardinality"
echo " Time confinement is $BK_TIME_CONFINEMENT seconds"
echo " Memory confinement is 16384 MBytes"
echo " Number of cores is 4"
echo " Run identifier is r247-blw7-152732549100093"
echo "====================================================================="
echo
echo "--------------------"
echo "content from stdout:"
echo
echo "=== Data for post analysis generated by BenchKit (invocation template)"
echo
if [ "LTLCardinality" = "UpperBounds" ] ; then
echo "The expected result is a vector of positive values"
echo NUM_VECTOR
elif [ "LTLCardinality" != "StateSpace" ] ; then
echo "The expected result is a vector of booleans"
echo BOOL_VECTOR
else
echo "no data necessary for post analysis"
fi
echo
if [ -f "LTLCardinality.txt" ] ; then
echo "here is the order used to build the result vector(from text file)"
for x in $(grep Property LTLCardinality.txt | cut -d ' ' -f 2 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ -f "LTLCardinality.xml" ] ; then # for cunf (txt files deleted;-)
echo echo "here is the order used to build the result vector(from xml file)"
for x in $(grep '' LTLCardinality.xml | cut -d '>' -f 2 | cut -d '<' -f 1 | sort -u) ; do
echo "FORMULA_NAME $x"
done
fi
echo
echo "=== Now, execution of the tool begins"
echo
echo -n "BK_START "
date -u +%s%3N
echo
timeout -s 9 $BK_TIME_CONFINEMENT bash -c "/home/mcc/BenchKit/BenchKit_head.sh 2> STDERR ; echo ; echo -n \"BK_STOP \" ; date -u +%s%3N"
if [ $? -eq 137 ] ; then
echo
echo "BK_TIME_CONFINEMENT_REACHED"
fi
echo
echo "--------------------"
echo "content from stderr:"
echo
cat STDERR ;