Execution Chart

We display below the execution chart for this examination (boot time has been removed).

Trace from the execution

Waiting for the VM to be ready (probing ssh)
.................
/home/mcc/execution
total 4.8M
-rw-r--r-- 1 mcc users 4.4K May 15 18:54 CTLCardinality.txt
-rw-r--r-- 1 mcc users 22K May 15 18:54 CTLCardinality.xml
-rw-r--r-- 1 mcc users 3.2K May 15 18:54 CTLFireability.txt
-rw-r--r-- 1 mcc users 18K May 15 18:54 CTLFireability.xml
-rw-r--r-- 1 mcc users 4.0K May 15 18:50 GenericPropertiesDefinition.xml
-rw-r--r-- 1 mcc users 5.8K May 15 18:50 GenericPropertiesVerdict.xml
-rw-r--r-- 1 mcc users 2.5K May 26 09:26 LTLCardinality.txt
-rw-r--r-- 1 mcc users 9.2K May 26 09:26 LTLCardinality.xml
-rw-r--r-- 1 mcc users 2.2K May 26 09:26 LTLFireability.txt
-rw-r--r-- 1 mcc users 10K May 26 09:26 LTLFireability.xml
-rw-r--r-- 1 mcc users 3.8K May 15 18:54 ReachabilityCardinality.txt
-rw-r--r-- 1 mcc users 16K May 15 18:54 ReachabilityCardinality.xml
-rw-r--r-- 1 mcc users 113 May 15 18:54 ReachabilityDeadlock.txt
-rw-r--r-- 1 mcc users 351 May 15 18:54 ReachabilityDeadlock.xml
-rw-r--r-- 1 mcc users 3.6K May 15 18:54 ReachabilityFireability.txt
-rw-r--r-- 1 mcc users 18K May 15 18:54 ReachabilityFireability.xml
-rw-r--r-- 1 mcc users 1.8K May 15 18:54 UpperBounds.txt
-rw-r--r-- 1 mcc users 3.9K May 15 18:54 UpperBounds.xml
-rw-r--r-- 1 mcc users 6 May 15 18:50 equiv_col
-rw-r--r-- 1 mcc users 8 May 15 18:50 instance
-rw-r--r-- 1 mcc users 6 May 15 18:50 iscolored
-rw-r--r-- 1 mcc users 4.7M May 15 18:50 model.pnml
=====================================================================
Generated by BenchKit 2-3637
Executing tool mcc4mcc-full
Input is Diffusion2D-PT-D40N050, examination is LTLCardinality
Time confinement is 3600 seconds
Memory confinement is 16384 MBytes
Number of cores is 4
Run identifier is r238-blw3-152732478200077
=====================================================================

--------------------
content from stdout:

=== Data for post analysis generated by BenchKit (invocation template)

The expected result is a vector of booleans
BOOL_VECTOR

here is the order used to build the result vector(from text file)
FORMULA_NAME Diffusion2D-PT-D40N050-LTLCardinality-00
FORMULA_NAME Diffusion2D-PT-D40N050-LTLCardinality-01
FORMULA_NAME Diffusion2D-PT-D40N050-LTLCardinality-02
FORMULA_NAME Diffusion2D-PT-D40N050-LTLCardinality-03
FORMULA_NAME Diffusion2D-PT-D40N050-LTLCardinality-04
FORMULA_NAME Diffusion2D-PT-D40N050-LTLCardinality-05
FORMULA_NAME Diffusion2D-PT-D40N050-LTLCardinality-06
FORMULA_NAME Diffusion2D-PT-D40N050-LTLCardinality-07
FORMULA_NAME Diffusion2D-PT-D40N050-LTLCardinality-08
FORMULA_NAME Diffusion2D-PT-D40N050-LTLCardinality-09
FORMULA_NAME Diffusion2D-PT-D40N050-LTLCardinality-10
FORMULA_NAME Diffusion2D-PT-D40N050-LTLCardinality-11
FORMULA_NAME Diffusion2D-PT-D40N050-LTLCardinality-12
FORMULA_NAME Diffusion2D-PT-D40N050-LTLCardinality-13
FORMULA_NAME Diffusion2D-PT-D40N050-LTLCardinality-14
FORMULA_NAME Diffusion2D-PT-D40N050-LTLCardinality-15

=== Now, execution of the tool begins

BK_START 1528023585911


BK_STOP 1528023809750

--------------------
content from stderr:

Prefix is 65b80f64.
Reading known information in /usr/share/mcc4mcc/65b80f64-known.json.
Reading learned information in /usr/share/mcc4mcc/65b80f64-learned.json.
Reading value translations in /usr/share/mcc4mcc/65b80f64-values.json.
Using directory /home/mcc/execution for input, as it contains a model.pnml file.
Using Diffusion2D-PT-D40N050 as instance name.
Using Diffusion2D as model name.
Using algorithm or tool bmdt.
Model characteristics are: {'Examination': 'LTLCardinality', 'Place/Transition': True, 'Colored': False, 'Relative-Time': 1, 'Relative-Memory': 1, 'Ordinary': True, 'Simple Free Choice': True, 'Extended Free Choice': True, 'State Machine': True, 'Marked Graph': False, 'Connected': True, 'Strongly Connected': True, 'Source Place': False, 'Sink Place': False, 'Source Transition': False, 'Sink Transition': False, 'Loop Free': True, 'Conservative': True, 'Sub-Conservative': True, 'Nested Units': False, 'Safe': False, 'Deadlock': False, 'Reversible': True, 'Quasi Live': True, 'Live': True}.
Known tools are: [{'Time': 1023974, 'Memory': 15945.03, 'Tool': 'lola'}, {'Time': 1038976, 'Memory': 15952.79, 'Tool': 'lola'}].
Learned tools are: [{'Tool': 'lola'}].
Learned tool lola is 1.0x far from the best tool lola.
LTLCardinality lola Diffusion2D-PT-D40N050...
----- Start make prepare stderr -----

Time: 3600 - MCC
----- Start make prepare stdout -----
===========================================================================================
Diffusion2D-PT-D40N050: translating PT Petri net model.pnml into LoLA format
===========================================================================================
translating PT Petri net complete


checking for too many tokens
===========================================================================================
Diffusion2D-PT-D40N050: translating PT formula LTLCardinality into LoLA format
===========================================================================================
translating formula complete
touch formulae;
----- Start make result stdout -----
----- Start make result stderr -----
LTLCardinality @ Diffusion2D-PT-D40N050 @ 3539 seconds
Makefile:222: recipe for target 'verify' failed
make: [verify] Error 134 (ignored)
----- Start make result stdout -----
----- Start make result stderr -----
lola: LoLA will run for 3539 seconds at most (--timelimit)
lola: NET
lola: reading net from model.pnml.lola
lola: finished parsing
lola: closed net file model.pnml.lola
lola: 13924/65536 symbol table entries, 3777 collisions
lola: preprocessing...
lola: finding significant places
lola: 1600 places, 12324 transitions, 1599 significant places
lola: computing forward-conflicting sets
lola: computing back-conflicting sets
lola: 1600 transition conflict sets
lola: TASK
lola: reading formula from Diffusion2D-PT-D40N050-LTLCardinality.task
lola: A (G ((cAMP__32_3_ <= cAMP__25_18_))) : A (X ((2 <= cAMP__8_28_))) : A ((cAMP__11_37_ <= cAMP__35_15_)) : A (X (G (G (G ((cAMP__39_4_ <= cAMP__40_38_)))))) : A ((cAMP__11_9_ <= cAMP__33_10_)) : A ((X (G ((cAMP__2_27_ <= cAMP__6_28_))) U ((3 <= cAMP__7_17_) U (cAMP__24_6_ <= cAMP__17_17_)))) : A (X ((cAMP__39_11_ <= cAMP__36_3_))) : A ((X (X ((1 <= cAMP__25_31_))) U (3 <= cAMP__24_34_))) : A ((cAMP__7_1_ <= cAMP__25_31_)) : A (G (X (X (F ((1 <= cAMP__9_38_)))))) : A ((cAMP__7_10_ <= cAMP__35_3_)) : A (G (G (X (X ((cAMP__16_33_ <= cAMP__17_31_)))))) : A ((2 <= cAMP__37_29_)) : A ((cAMP__5_18_ <= cAMP__40_25_)) : A (G (F (G (G ((1 <= cAMP__19_9_)))))) : A (G (F (F (G ((cAMP__40_5_ <= cAMP__25_8_))))))
lola: computing a collection of formulas
lola: RUNNING
lola: subprocess 0 will run for 221 seconds at most (--localtimelimit=-1)
lola: ========================================
lola: ...considering subproblem: A (G ((cAMP__32_3_ <= cAMP__25_18_)))
lola: ========================================
lola: SUBTASK
lola: checking invariance
lola: Planning: workflow for reachability check: search (--findpath=off)
lola: STORE
lola: using a bit-perfect encoder (--encoder=bit)
lola: using 6396 bytes per marking, with 0 unused bits
lola: using a prefix tree store (--store=prefix)
lola: SEARCH (state space)
lola: state space: using reachability graph (--search=depth)
lola: state space: using reachability preserving stubborn set method with insertion algorithm (--stubborn=tarjan)
lola: RUNNING
lola: 10136 markings, 30104 edges, 2027 markings/sec, 0 secs
lola: 20224 markings, 57512 edges, 2018 markings/sec, 5 secs
lola: 30382 markings, 86125 edges, 2032 markings/sec, 10 secs
lola: 40526 markings, 114124 edges, 2029 markings/sec, 15 secs
lola: 50668 markings, 144540 edges, 2028 markings/sec, 20 secs
lola: 60848 markings, 168141 edges, 2036 markings/sec, 25 secs
lola: 71014 markings, 192184 edges, 2033 markings/sec, 30 secs
lola: 81154 markings, 216531 edges, 2028 markings/sec, 35 secs
lola: 91311 markings, 242617 edges, 2031 markings/sec, 40 secs
lola: 101431 markings, 269778 edges, 2024 markings/sec, 45 secs
lola: 111537 markings, 296344 edges, 2021 markings/sec, 50 secs
lola: 121704 markings, 321415 edges, 2033 markings/sec, 55 secs
lola: 131849 markings, 349566 edges, 2029 markings/sec, 60 secs
lola: 141940 markings, 376213 edges, 2018 markings/sec, 65 secs
lola: 152090 markings, 402993 edges, 2030 markings/sec, 70 secs
lola: 162214 markings, 430471 edges, 2025 markings/sec, 75 secs
lola: 172351 markings, 458514 edges, 2027 markings/sec, 80 secs
lola: 182379 markings, 484789 edges, 2006 markings/sec, 85 secs
lola: 192343 markings, 511400 edges, 1993 markings/sec, 90 secs
lola: 202342 markings, 538978 edges, 2000 markings/sec, 95 secs
lola: 212174 markings, 568321 edges, 1966 markings/sec, 100 secs
lola: 221662 markings, 592365 edges, 1898 markings/sec, 105 secs
lola: 231395 markings, 620297 edges, 1947 markings/sec, 110 secs
lola: 241631 markings, 651146 edges, 2047 markings/sec, 115 secs
lola: 251824 markings, 677528 edges, 2039 markings/sec, 120 secs
lola: 261874 markings, 706856 edges, 2010 markings/sec, 125 secs
lola: 272105 markings, 733170 edges, 2046 markings/sec, 130 secs
lola: 282378 markings, 756417 edges, 2055 markings/sec, 135 secs
lola: 292655 markings, 780644 edges, 2055 markings/sec, 140 secs
lola: 302976 markings, 802632 edges, 2064 markings/sec, 145 secs
lola: 313251 markings, 826133 edges, 2055 markings/sec, 150 secs
lola: 322702 markings, 847389 edges, 1890 markings/sec, 155 secs
lola: 332164 markings, 867890 edges, 1892 markings/sec, 160 secs
lola: 342118 markings, 892130 edges, 1991 markings/sec, 165 secs
lola: 352232 markings, 919519 edges, 2023 markings/sec, 170 secs
lola: 362500 markings, 945738 edges, 2054 markings/sec, 175 secs
lola: 372769 markings, 972855 edges, 2054 markings/sec, 180 secs
lola: 383053 markings, 997964 edges, 2057 markings/sec, 185 secs
lola: 393252 markings, 1020915 edges, 2040 markings/sec, 190 secs
lola: 403407 markings, 1045311 edges, 2031 markings/sec, 195 secs
lola: 413548 markings, 1070647 edges, 2028 markings/sec, 200 secs
lola: 423369 markings, 1094494 edges, 1964 markings/sec, 205 secs
lola: 432537 markings, 1115931 edges, 1834 markings/sec, 210 secs
lola: 441752 markings, 1138199 edges, 1843 markings/sec, 215 secs
lola: local time limit reached - aborting
lola: Child process aborted or communication problem between parent and child process
terminate called after throwing an instance of 'std::runtime_error'
what(): parse error at position 0: unexpected character, last read: 'I'
Aborted (core dumped)
----- Kill lola and sara stderr -----
FORMULA Diffusion2D-PT-D40N050-LTLCardinality-0 CANNOT_COMPUTE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS TOPOLOGICAL USE_NUPN
FORMULA Diffusion2D-PT-D40N050-LTLCardinality-1 CANNOT_COMPUTE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS TOPOLOGICAL USE_NUPN
FORMULA Diffusion2D-PT-D40N050-LTLCardinality-2 CANNOT_COMPUTE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS TOPOLOGICAL USE_NUPN
FORMULA Diffusion2D-PT-D40N050-LTLCardinality-3 CANNOT_COMPUTE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS TOPOLOGICAL USE_NUPN
FORMULA Diffusion2D-PT-D40N050-LTLCardinality-4 CANNOT_COMPUTE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS TOPOLOGICAL USE_NUPN
FORMULA Diffusion2D-PT-D40N050-LTLCardinality-5 CANNOT_COMPUTE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS TOPOLOGICAL USE_NUPN
FORMULA Diffusion2D-PT-D40N050-LTLCardinality-6 CANNOT_COMPUTE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS TOPOLOGICAL USE_NUPN
FORMULA Diffusion2D-PT-D40N050-LTLCardinality-7 CANNOT_COMPUTE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS TOPOLOGICAL USE_NUPN
FORMULA Diffusion2D-PT-D40N050-LTLCardinality-8 CANNOT_COMPUTE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS TOPOLOGICAL USE_NUPN
FORMULA Diffusion2D-PT-D40N050-LTLCardinality-9 CANNOT_COMPUTE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS TOPOLOGICAL USE_NUPN
FORMULA Diffusion2D-PT-D40N050-LTLCardinality-10 CANNOT_COMPUTE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS TOPOLOGICAL USE_NUPN
FORMULA Diffusion2D-PT-D40N050-LTLCardinality-11 CANNOT_COMPUTE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS TOPOLOGICAL USE_NUPN
FORMULA Diffusion2D-PT-D40N050-LTLCardinality-12 CANNOT_COMPUTE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS TOPOLOGICAL USE_NUPN
FORMULA Diffusion2D-PT-D40N050-LTLCardinality-13 CANNOT_COMPUTE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS TOPOLOGICAL USE_NUPN
FORMULA Diffusion2D-PT-D40N050-LTLCardinality-14 CANNOT_COMPUTE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS TOPOLOGICAL USE_NUPN
FORMULA Diffusion2D-PT-D40N050-LTLCardinality-15 CANNOT_COMPUTE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS TOPOLOGICAL USE_NUPN
----- Kill lola and sara stdout -----
----- Finished stdout -----
----- Finished stderr -----

Sequence of Actions to be Executed by the VM

This is useful if one wants to reexecute the tool in the VM from the submitted image disk.

set -x
# this is for BenchKit: configuration of major elements for the test
export BK_INPUT="Diffusion2D-PT-D40N050"
export BK_EXAMINATION="LTLCardinality"
export BK_TOOL="mcc4mcc-full"
export BK_RESULT_DIR="/tmp/BK_RESULTS/OUTPUTS"
export BK_TIME_CONFINEMENT="3600"
export BK_MEMORY_CONFINEMENT="16384"

# this is specific to your benchmark or test

export BIN_DIR="$HOME/BenchKit/bin"

# remove the execution directoty if it exists (to avoid increse of .vmdk images)
if [ -d execution ] ; then
rm -rf execution
fi

tar xzf /home/mcc/BenchKit/INPUTS/Diffusion2D-PT-D40N050.tgz
mv Diffusion2D-PT-D40N050 execution
cd execution
pwd
ls -lh

# this is for BenchKit: explicit launching of the test
echo "====================================================================="
echo " Generated by BenchKit 2-3637"
echo " Executing tool mcc4mcc-full"
echo " Input is Diffusion2D-PT-D40N050, examination is LTLCardinality"
echo " Time confinement is $BK_TIME_CONFINEMENT seconds"
echo " Memory confinement is 16384 MBytes"
echo " Number of cores is 4"
echo " Run identifier is r238-blw3-152732478200077"
echo "====================================================================="
echo
echo "--------------------"
echo "content from stdout:"
echo
echo "=== Data for post analysis generated by BenchKit (invocation template)"
echo
if [ "LTLCardinality" = "UpperBounds" ] ; then
echo "The expected result is a vector of positive values"
echo NUM_VECTOR
elif [ "LTLCardinality" != "StateSpace" ] ; then
echo "The expected result is a vector of booleans"
echo BOOL_VECTOR
else
echo "no data necessary for post analysis"
fi
echo
if [ -f "LTLCardinality.txt" ] ; then
echo "here is the order used to build the result vector(from text file)"
for x in $(grep Property LTLCardinality.txt | cut -d ' ' -f 2 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ -f "LTLCardinality.xml" ] ; then # for cunf (txt files deleted;-)
echo echo "here is the order used to build the result vector(from xml file)"
for x in $(grep '' LTLCardinality.xml | cut -d '>' -f 2 | cut -d '<' -f 1 | sort -u) ; do
echo "FORMULA_NAME $x"
done
fi
echo
echo "=== Now, execution of the tool begins"
echo
echo -n "BK_START "
date -u +%s%3N
echo
timeout -s 9 $BK_TIME_CONFINEMENT bash -c "/home/mcc/BenchKit/BenchKit_head.sh 2> STDERR ; echo ; echo -n \"BK_STOP \" ; date -u +%s%3N"
if [ $? -eq 137 ] ; then
echo
echo "BK_TIME_CONFINEMENT_REACHED"
fi
echo
echo "--------------------"
echo "content from stderr:"
echo
cat STDERR ;