Execution Chart

We display below the execution chart for this examination (boot time has been removed).

Trace from the execution

Waiting for the VM to be ready (probing ssh)
...................
/home/mcc/execution
total 2.2M
-rw-r--r-- 1 mcc users 2.9K May 15 18:54 CTLCardinality.txt
-rw-r--r-- 1 mcc users 15K May 15 18:54 CTLCardinality.xml
-rw-r--r-- 1 mcc users 2.6K May 15 18:54 CTLFireability.txt
-rw-r--r-- 1 mcc users 18K May 15 18:54 CTLFireability.xml
-rw-r--r-- 1 mcc users 4.0K May 15 18:50 GenericPropertiesDefinition.xml
-rw-r--r-- 1 mcc users 5.6K May 15 18:50 GenericPropertiesVerdict.xml
-rw-r--r-- 1 mcc users 2.3K May 26 09:26 LTLCardinality.txt
-rw-r--r-- 1 mcc users 11K May 26 09:26 LTLCardinality.xml
-rw-r--r-- 1 mcc users 1.8K May 26 09:26 LTLFireability.txt
-rw-r--r-- 1 mcc users 8.6K May 26 09:26 LTLFireability.xml
-rw-r--r-- 1 mcc users 3.2K May 15 18:54 ReachabilityCardinality.txt
-rw-r--r-- 1 mcc users 15K May 15 18:54 ReachabilityCardinality.xml
-rw-r--r-- 1 mcc users 105 May 15 18:54 ReachabilityDeadlock.txt
-rw-r--r-- 1 mcc users 343 May 15 18:54 ReachabilityDeadlock.xml
-rw-r--r-- 1 mcc users 2.3K May 15 18:54 ReachabilityFireability.txt
-rw-r--r-- 1 mcc users 12K May 15 18:54 ReachabilityFireability.xml
-rw-r--r-- 1 mcc users 1.6K May 15 18:54 UpperBounds.txt
-rw-r--r-- 1 mcc users 3.6K May 15 18:54 UpperBounds.xml
-rw-r--r-- 1 mcc users 6 May 15 18:50 equiv_col
-rw-r--r-- 1 mcc users 7 May 15 18:50 instance
-rw-r--r-- 1 mcc users 6 May 15 18:50 iscolored
-rw-r--r-- 1 mcc users 2.1M May 15 18:50 model.pnml
=====================================================================
Generated by BenchKit 2-3637
Executing tool itstoolsl
Input is Echo-PT-d05r03, examination is LTLFireability
Time confinement is 3600 seconds
Memory confinement is 16384 MBytes
Number of cores is 4
Run identifier is r237-blw3-152732477800138
=====================================================================

--------------------
content from stdout:

=== Data for post analysis generated by BenchKit (invocation template)

The expected result is a vector of booleans
BOOL_VECTOR

here is the order used to build the result vector(from text file)
FORMULA_NAME Echo-PT-d05r03-LTLFireability-00
FORMULA_NAME Echo-PT-d05r03-LTLFireability-01
FORMULA_NAME Echo-PT-d05r03-LTLFireability-02
FORMULA_NAME Echo-PT-d05r03-LTLFireability-03
FORMULA_NAME Echo-PT-d05r03-LTLFireability-04
FORMULA_NAME Echo-PT-d05r03-LTLFireability-05
FORMULA_NAME Echo-PT-d05r03-LTLFireability-06
FORMULA_NAME Echo-PT-d05r03-LTLFireability-07
FORMULA_NAME Echo-PT-d05r03-LTLFireability-08
FORMULA_NAME Echo-PT-d05r03-LTLFireability-09
FORMULA_NAME Echo-PT-d05r03-LTLFireability-10
FORMULA_NAME Echo-PT-d05r03-LTLFireability-11
FORMULA_NAME Echo-PT-d05r03-LTLFireability-12
FORMULA_NAME Echo-PT-d05r03-LTLFireability-13
FORMULA_NAME Echo-PT-d05r03-LTLFireability-14
FORMULA_NAME Echo-PT-d05r03-LTLFireability-15

=== Now, execution of the tool begins

BK_START 1528018840648

Converted graph to binary with : CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.louvain.binaries_1.0.0.201805241334/bin/convert-linux64, -i, /tmp/graph5950189591595715617.txt, -o, /tmp/graph5950189591595715617.bin, -w, /tmp/graph5950189591595715617.weights], workingDir=null]
Built communities with : CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.louvain.binaries_1.0.0.201805241334/bin/louvain-linux64, /tmp/graph5950189591595715617.bin, -l, -1, -v, -w, /tmp/graph5950189591595715617.weights, -q, 0, -e, 0.001], workingDir=null]
Using solver Z3 to compute partial order matrices.
Built C files in :
/home/mcc/execution
Invoking ITS tools like this :CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.201805241334/bin/its-ltl-linux64, --gc-threshold, 2000000, -i, /home/mcc/execution/LTLFireability.pnml.gal, -t, CGAL, -LTL, /home/mcc/execution/LTLFireability.ltl, -c, -stutter-deadlock], workingDir=/home/mcc/execution]

its-ltl command run as :

/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.201805241334/bin/its-ltl-linux64 --gc-threshold 2000000 -i /home/mcc/execution/LTLFireability.pnml.gal -t CGAL -LTL /home/mcc/execution/LTLFireability.ltl -c -stutter-deadlock
Read 16 LTL properties
Running compilation step : CommandLine [args=[gcc, -c, -I/home/mcc/BenchKit//lts_install_dir//include, -I., -std=c99, -fPIC, -O3, model.c], workingDir=/home/mcc/execution]
Checking formula 0 : !((F(F(("((i3.u9.p1755>=1)&&(i3.u157.p3700>=1))")U(G("((((((((i5.u88.p2055>=1)&&(i5.u88.p432>=1))&&(i5.u88.p433>=1))&&(i5.u88.p434>=1))&&(i5.u88.p436>=1))&&(i5.u88.p437>=1))&&(i5.u88.p438>=1))&&(i5.u88.p439>=1))"))))))
Formula 0 simplified : !F("((i3.u9.p1755>=1)&&(i3.u157.p3700>=1))" U G"((((((((i5.u88.p2055>=1)&&(i5.u88.p432>=1))&&(i5.u88.p433>=1))&&(i5.u88.p434>=1))&&(i5.u88.p436>=1))&&(i5.u88.p437>=1))&&(i5.u88.p438>=1))&&(i5.u88.p439>=1))")
built 147 ordering constraints for composite.
built 318 ordering constraints for composite.
built 334 ordering constraints for composite.
built 504 ordering constraints for composite.
built 524 ordering constraints for composite.
built 300 ordering constraints for composite.
built 547 ordering constraints for composite.
built 388 ordering constraints for composite.
built 640 ordering constraints for composite.
built 706 ordering constraints for composite.
built 658 ordering constraints for composite.
built 417 ordering constraints for composite.
built 424 ordering constraints for composite.
built 340 ordering constraints for composite.
built 476 ordering constraints for composite.
built 380 ordering constraints for composite.
Compilation finished in 54300 ms.
Running link step : CommandLine [args=[gcc, -shared, -o, gal.so, model.o], workingDir=/home/mcc/execution]
Link finished in 74 ms.
Running LTSmin : CommandLine [args=[/home/mcc/BenchKit//lts_install_dir//bin/pins2lts-mc, ./gal.so, --threads=1, -p, --pins-guards, --when, --ltl, <>(<>(((LTLAP0==true))U([]((LTLAP1==true))))), --buchi-type=spotba], workingDir=/home/mcc/execution]
WARNING : LTSmin timed out (>225 s) on command CommandLine [args=[/home/mcc/BenchKit//lts_install_dir//bin/pins2lts-mc, ./gal.so, --threads=1, -p, --pins-guards, --when, --ltl, <>(<>(((LTLAP0==true))U([]((LTLAP1==true))))), --buchi-type=spotba], workingDir=/home/mcc/execution]
Running LTSmin : CommandLine [args=[/home/mcc/BenchKit//lts_install_dir//bin/pins2lts-mc, ./gal.so, --threads=1, -p, --pins-guards, --when, --ltl, (<>((LTLAP2==true)))U((LTLAP3==true)), --buchi-type=spotba], workingDir=/home/mcc/execution]
WARNING : LTSmin timed out (>225 s) on command CommandLine [args=[/home/mcc/BenchKit//lts_install_dir//bin/pins2lts-mc, ./gal.so, --threads=1, -p, --pins-guards, --when, --ltl, (<>((LTLAP2==true)))U((LTLAP3==true)), --buchi-type=spotba], workingDir=/home/mcc/execution]
Running LTSmin : CommandLine [args=[/home/mcc/BenchKit//lts_install_dir//bin/pins2lts-mc, ./gal.so, --threads=1, --when, --ltl, <>(X(((LTLAP4==true))U(X((LTLAP5==true))))), --buchi-type=spotba], workingDir=/home/mcc/execution]
WARNING : LTS min runner thread failed on error :java.lang.RuntimeException: Unexpected exception when executing ltsmin :CommandLine [args=[/home/mcc/BenchKit//lts_install_dir//bin/pins2lts-mc, ./gal.so, --threads=1, --when, --ltl, <>(X(((LTLAP4==true))U(X((LTLAP5==true))))), --buchi-type=spotba], workingDir=/home/mcc/execution]
255
terminate called after throwing an instance of 'std::bad_alloc'
what(): std::bad_alloc

BK_STOP 1528019446931

--------------------
content from stderr:

+ export BINDIR=/home/mcc/BenchKit/
+ BINDIR=/home/mcc/BenchKit/
++ pwd
+ export MODEL=/home/mcc/execution
+ MODEL=/home/mcc/execution
+ /home/mcc/BenchKit//runeclipse.sh /home/mcc/execution LTLFireability -its -ltsminpath /home/mcc/BenchKit//lts_install_dir/ -louvain -smt
+ ulimit -s 65536
+ [[ -z '' ]]
+ export LTSMIN_MEM_SIZE=8589934592
+ LTSMIN_MEM_SIZE=8589934592
+ /home/mcc/BenchKit//itstools/its-tools -consoleLog -data /home/mcc/execution/workspace -pnfolder /home/mcc/execution -examination LTLFireability -z3path /home/mcc/BenchKit//z3/bin/z3 -yices2path /home/mcc/BenchKit//yices/bin/yices -its -ltsminpath /home/mcc/BenchKit//lts_install_dir/ -louvain -smt -vmargs -Dosgi.locking=none -Declipse.stateSaveDelayInterval=-1 -Dosgi.configuration.area=/tmp/.eclipse -Xss8m -Xms40m -Xmx8192m -Dfile.encoding=UTF-8 -Dosgi.requiredJavaVersion=1.6
Jun 03, 2018 9:40:42 AM fr.lip6.move.gal.application.Application start
INFO: Running its-tools with arguments : [-pnfolder, /home/mcc/execution, -examination, LTLFireability, -z3path, /home/mcc/BenchKit//z3/bin/z3, -yices2path, /home/mcc/BenchKit//yices/bin/yices, -its, -ltsminpath, /home/mcc/BenchKit//lts_install_dir/, -louvain, -smt]
Jun 03, 2018 9:40:42 AM fr.lip6.move.gal.application.MccTranslator transformPNML
INFO: Parsing pnml file : /home/mcc/execution/model.pnml
Jun 03, 2018 9:40:42 AM fr.lip6.move.gal.nupn.PTNetReader loadFromXML
INFO: Load time of PNML (sax parser for PT used): 345 ms
Jun 03, 2018 9:40:42 AM fr.lip6.move.gal.pnml.togal.PTGALTransformer handlePage
INFO: Transformed 3717 places.
Jun 03, 2018 9:40:42 AM fr.lip6.move.gal.pnml.togal.PTGALTransformer handlePage
INFO: Transformed 3222 transitions.
Jun 03, 2018 9:40:43 AM fr.lip6.move.gal.application.MccTranslator applyOrder
INFO: Applying decomposition
Jun 03, 2018 9:40:44 AM fr.lip6.move.gal.instantiate.GALRewriter flatten
INFO: Flatten gal took : 1162 ms
Jun 03, 2018 9:40:44 AM fr.lip6.move.gal.instantiate.GALRewriter flatten
INFO: Flatten gal took : 598 ms
Begin: Sun Jun 3 09:40:45 2018

Computation of communities with the Newman-Girvan Modularity quality function

level 0:
start computation: Sun Jun 3 09:40:45 2018
network size: 3717 nodes, 38084 links, 6444 weight
quality increased from -0.000417505 to 0.513948
end computation: Sun Jun 3 09:40:45 2018
level 1:
start computation: Sun Jun 3 09:40:45 2018
network size: 198 nodes, 4102 links, 6444 weight
quality increased from 0.513948 to 0.634393
end computation: Sun Jun 3 09:40:45 2018
level 2:
start computation: Sun Jun 3 09:40:45 2018
network size: 24 nodes, 412 links, 6444 weight
quality increased from 0.634393 to 0.647731
end computation: Sun Jun 3 09:40:45 2018
level 3:
start computation: Sun Jun 3 09:40:45 2018
network size: 15 nodes, 199 links, 6444 weight
quality increased from 0.647731 to 0.647731
end computation: Sun Jun 3 09:40:45 2018
End: Sun Jun 3 09:40:45 2018
Total duration: 0 sec
0.647731
Jun 03, 2018 9:40:45 AM fr.lip6.move.gal.instantiate.CompositeBuilder decomposeWithOrder
INFO: Decomposing Gal with order
Jun 03, 2018 9:40:46 AM fr.lip6.move.gal.instantiate.GALRewriter flatten
INFO: Flatten gal took : 515 ms
Jun 03, 2018 9:40:46 AM fr.lip6.move.gal.instantiate.CompositeBuilder rewriteArraysToAllowPartition
INFO: Rewriting arrays to variables to allow decomposition.
Jun 03, 2018 9:40:49 AM fr.lip6.move.gal.instantiate.Instantiator fuseIsomorphicEffects
INFO: Removed a total of 8141 redundant transitions.
Jun 03, 2018 9:40:49 AM fr.lip6.move.serialization.SerializationUtil systemToFile
INFO: Time to serialize gal into /home/mcc/execution/LTLFireability.pnml.gal : 94 ms
Jun 03, 2018 9:40:49 AM fr.lip6.move.serialization.SerializationUtil serializePropertiesForITSLTLTools
INFO: Time to serialize properties into /home/mcc/execution/LTLFireability.ltl : 2 ms
Jun 03, 2018 9:40:50 AM fr.lip6.move.gal.semantics.DeterministicNextBuilder getDeterministicNext
INFO: Input system was already deterministic with 3222 transitions.
Jun 03, 2018 9:40:50 AM fr.lip6.move.gal.gal2pins.Gal2PinsTransformerNext transform
INFO: Too many transitions (3222) to apply POR reductions. Disabling POR matrices.
Jun 03, 2018 9:40:50 AM fr.lip6.move.gal.gal2pins.Gal2PinsTransformerNext transform
INFO: Built C files in 1076ms conformant to PINS in folder :/home/mcc/execution
pins2lts-mc, 0.000: Registering PINS so language module
pins2lts-mc, 0.000, ** error **: out of memory trying to get 4294967296
java.lang.RuntimeException: Unexpected exception when executing ltsmin :CommandLine [args=[/home/mcc/BenchKit//lts_install_dir//bin/pins2lts-mc, ./gal.so, --threads=1, --when, --ltl, <>(X(((LTLAP4==true))U(X((LTLAP5==true))))), --buchi-type=spotba], workingDir=/home/mcc/execution]
255
at fr.lip6.move.gal.application.LTSminRunner.checkProperty(LTSminRunner.java:167)
at fr.lip6.move.gal.application.LTSminRunner.access$9(LTSminRunner.java:122)
at fr.lip6.move.gal.application.LTSminRunner$1.run(LTSminRunner.java:91)
at java.lang.Thread.run(Thread.java:748)
ITS-tools command line returned an error code 134

Sequence of Actions to be Executed by the VM

This is useful if one wants to reexecute the tool in the VM from the submitted image disk.

set -x
# this is for BenchKit: configuration of major elements for the test
export BK_INPUT="Echo-PT-d05r03"
export BK_EXAMINATION="LTLFireability"
export BK_TOOL="itstoolsl"
export BK_RESULT_DIR="/tmp/BK_RESULTS/OUTPUTS"
export BK_TIME_CONFINEMENT="3600"
export BK_MEMORY_CONFINEMENT="16384"

# this is specific to your benchmark or test

export BIN_DIR="$HOME/BenchKit/bin"

# remove the execution directoty if it exists (to avoid increse of .vmdk images)
if [ -d execution ] ; then
rm -rf execution
fi

tar xzf /home/mcc/BenchKit/INPUTS/Echo-PT-d05r03.tgz
mv Echo-PT-d05r03 execution
cd execution
pwd
ls -lh

# this is for BenchKit: explicit launching of the test
echo "====================================================================="
echo " Generated by BenchKit 2-3637"
echo " Executing tool itstoolsl"
echo " Input is Echo-PT-d05r03, examination is LTLFireability"
echo " Time confinement is $BK_TIME_CONFINEMENT seconds"
echo " Memory confinement is 16384 MBytes"
echo " Number of cores is 4"
echo " Run identifier is r237-blw3-152732477800138"
echo "====================================================================="
echo
echo "--------------------"
echo "content from stdout:"
echo
echo "=== Data for post analysis generated by BenchKit (invocation template)"
echo
if [ "LTLFireability" = "UpperBounds" ] ; then
echo "The expected result is a vector of positive values"
echo NUM_VECTOR
elif [ "LTLFireability" != "StateSpace" ] ; then
echo "The expected result is a vector of booleans"
echo BOOL_VECTOR
else
echo "no data necessary for post analysis"
fi
echo
if [ -f "LTLFireability.txt" ] ; then
echo "here is the order used to build the result vector(from text file)"
for x in $(grep Property LTLFireability.txt | cut -d ' ' -f 2 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ -f "LTLFireability.xml" ] ; then # for cunf (txt files deleted;-)
echo echo "here is the order used to build the result vector(from xml file)"
for x in $(grep '' LTLFireability.xml | cut -d '>' -f 2 | cut -d '<' -f 1 | sort -u) ; do
echo "FORMULA_NAME $x"
done
fi
echo
echo "=== Now, execution of the tool begins"
echo
echo -n "BK_START "
date -u +%s%3N
echo
timeout -s 9 $BK_TIME_CONFINEMENT bash -c "/home/mcc/BenchKit/BenchKit_head.sh 2> STDERR ; echo ; echo -n \"BK_STOP \" ; date -u +%s%3N"
if [ $? -eq 137 ] ; then
echo
echo "BK_TIME_CONFINEMENT_REACHED"
fi
echo
echo "--------------------"
echo "content from stderr:"
echo
cat STDERR ;