Execution Chart

We display below the execution chart for this examination (boot time has been removed).

Trace from the execution

Waiting for the VM to be ready (probing ssh)
..................
/home/mcc/execution
total 21M
-rw-r--r-- 1 mcc users 13K May 15 18:54 CTLCardinality.txt
-rw-r--r-- 1 mcc users 41K May 15 18:54 CTLCardinality.xml
-rw-r--r-- 1 mcc users 259K May 15 18:54 CTLFireability.txt
-rw-r--r-- 1 mcc users 736K May 15 18:54 CTLFireability.xml
-rw-r--r-- 1 mcc users 4.0K May 15 18:50 GenericPropertiesDefinition.xml
-rw-r--r-- 1 mcc users 6.2K May 15 18:50 GenericPropertiesVerdict.xml
-rw-r--r-- 1 mcc users 11K May 26 09:27 LTLCardinality.txt
-rw-r--r-- 1 mcc users 26K May 26 09:27 LTLCardinality.xml
-rw-r--r-- 1 mcc users 47K May 26 09:27 LTLFireability.txt
-rw-r--r-- 1 mcc users 139K May 26 09:27 LTLFireability.xml
-rw-r--r-- 1 mcc users 24K May 15 18:54 ReachabilityCardinality.txt
-rw-r--r-- 1 mcc users 73K May 15 18:54 ReachabilityCardinality.xml
-rw-r--r-- 1 mcc users 110 May 15 18:54 ReachabilityDeadlock.txt
-rw-r--r-- 1 mcc users 348 May 15 18:54 ReachabilityDeadlock.xml
-rw-r--r-- 1 mcc users 68K May 15 18:54 ReachabilityFireability.txt
-rw-r--r-- 1 mcc users 213K May 15 18:54 ReachabilityFireability.xml
-rw-r--r-- 1 mcc users 4.9K May 15 18:54 UpperBounds.txt
-rw-r--r-- 1 mcc users 11K May 15 18:54 UpperBounds.xml
-rw-r--r-- 1 mcc users 5 May 15 18:50 equiv_col
-rw-r--r-- 1 mcc users 7 May 15 18:50 instance
-rw-r--r-- 1 mcc users 6 May 15 18:50 iscolored
-rw-r--r-- 1 mcc users 19M May 15 18:50 model.pnml
=====================================================================
Generated by BenchKit 2-3637
Executing tool itstoolsl
Input is PolyORBNT-PT-S10J80, examination is LTLFireability
Time confinement is 3600 seconds
Memory confinement is 16384 MBytes
Number of cores is 4
Run identifier is r213-smll-152732264500464
=====================================================================

--------------------
content from stdout:

=== Data for post analysis generated by BenchKit (invocation template)

The expected result is a vector of booleans
BOOL_VECTOR

here is the order used to build the result vector(from text file)
FORMULA_NAME PolyORBNT-PT-S10J80-LTLFireability-00
FORMULA_NAME PolyORBNT-PT-S10J80-LTLFireability-01
FORMULA_NAME PolyORBNT-PT-S10J80-LTLFireability-02
FORMULA_NAME PolyORBNT-PT-S10J80-LTLFireability-03
FORMULA_NAME PolyORBNT-PT-S10J80-LTLFireability-04
FORMULA_NAME PolyORBNT-PT-S10J80-LTLFireability-05
FORMULA_NAME PolyORBNT-PT-S10J80-LTLFireability-06
FORMULA_NAME PolyORBNT-PT-S10J80-LTLFireability-07
FORMULA_NAME PolyORBNT-PT-S10J80-LTLFireability-08
FORMULA_NAME PolyORBNT-PT-S10J80-LTLFireability-09
FORMULA_NAME PolyORBNT-PT-S10J80-LTLFireability-10
FORMULA_NAME PolyORBNT-PT-S10J80-LTLFireability-11
FORMULA_NAME PolyORBNT-PT-S10J80-LTLFireability-12
FORMULA_NAME PolyORBNT-PT-S10J80-LTLFireability-13
FORMULA_NAME PolyORBNT-PT-S10J80-LTLFireability-14
FORMULA_NAME PolyORBNT-PT-S10J80-LTLFireability-15

=== Now, execution of the tool begins

BK_START 1527811312538

Converted graph to binary with : CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.louvain.binaries_1.0.0.201805241334/bin/convert-linux64, -i, /tmp/graph4127096669235324680.txt, -o, /tmp/graph4127096669235324680.bin, -w, /tmp/graph4127096669235324680.weights], workingDir=null]
Built communities with : CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.louvain.binaries_1.0.0.201805241334/bin/louvain-linux64, /tmp/graph4127096669235324680.bin, -l, -1, -v, -w, /tmp/graph4127096669235324680.weights, -q, 0, -e, 0.001], workingDir=null]
Using solver Z3 to compute partial order matrices.
Built C files in :
/home/mcc/execution
Invoking ITS tools like this :CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.201805241334/bin/its-ltl-linux64, --gc-threshold, 2000000, -i, /home/mcc/execution/LTLFireability.pnml.gal, -t, CGAL, -LTL, /home/mcc/execution/LTLFireability.ltl, -c, -stutter-deadlock], workingDir=/home/mcc/execution]

its-ltl command run as :

/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.201805241334/bin/its-ltl-linux64 --gc-threshold 2000000 -i /home/mcc/execution/LTLFireability.pnml.gal -t CGAL -LTL /home/mcc/execution/LTLFireability.ltl -c -stutter-deadlock
Read 16 LTL properties
Running compilation step : CommandLine [args=[gcc, -c, -I/home/mcc/BenchKit//lts_install_dir//include, -I., -std=c99, -fPIC, -O3, model.c], workingDir=/home/mcc/execution]
Compilation finished in 76849 ms.
Running link step : CommandLine [args=[gcc, -shared, -o, gal.so, model.o], workingDir=/home/mcc/execution]
Link finished in 81 ms.
Running LTSmin : CommandLine [args=[/home/mcc/BenchKit//lts_install_dir//bin/pins2lts-mc, ./gal.so, --threads=1, -p, --pins-guards, --when, --ltl, <>((LTLAP0==true)), --buchi-type=spotba], workingDir=/home/mcc/execution]
Checking formula 0 : !((F("(i5.u128.Schedule_Task_E_1_CheckSource_0>=1)")))
Formula 0 simplified : !F"(i5.u128.Schedule_Task_E_1_CheckSource_0>=1)"
built 19 ordering constraints for composite.
built 651 ordering constraints for composite.
built 1793 ordering constraints for composite.
built 11785 ordering constraints for composite.
built 36 ordering constraints for composite.
WARNING : LTSmin timed out (>225 s) on command CommandLine [args=[/home/mcc/BenchKit//lts_install_dir//bin/pins2lts-mc, ./gal.so, --threads=1, -p, --pins-guards, --when, --ltl, <>((LTLAP0==true)), --buchi-type=spotba], workingDir=/home/mcc/execution]
Running LTSmin : CommandLine [args=[/home/mcc/BenchKit//lts_install_dir//bin/pins2lts-mc, ./gal.so, --threads=1, -p, --pins-guards, --when, --ltl, [](<>([]((LTLAP1==true)))), --buchi-type=spotba], workingDir=/home/mcc/execution]
WARNING : LTSmin timed out (>225 s) on command CommandLine [args=[/home/mcc/BenchKit//lts_install_dir//bin/pins2lts-mc, ./gal.so, --threads=1, -p, --pins-guards, --when, --ltl, [](<>([]((LTLAP1==true)))), --buchi-type=spotba], workingDir=/home/mcc/execution]
Running LTSmin : CommandLine [args=[/home/mcc/BenchKit//lts_install_dir//bin/pins2lts-mc, ./gal.so, --threads=1, -p, --pins-guards, --when, --ltl, (((LTLAP2==true))U(<>((LTLAP3==true))))U(([]((LTLAP1==true)))U(<>((LTLAP4==true)))), --buchi-type=spotba], workingDir=/home/mcc/execution]
WARNING : LTS min runner thread failed on error :java.lang.RuntimeException: Unexpected exception when executing ltsmin :CommandLine [args=[/home/mcc/BenchKit//lts_install_dir//bin/pins2lts-mc, ./gal.so, --threads=1, -p, --pins-guards, --when, --ltl, (((LTLAP2==true))U(<>((LTLAP3==true))))U(([]((LTLAP1==true)))U(<>((LTLAP4==true)))), --buchi-type=spotba], workingDir=/home/mcc/execution]
255
terminate called after throwing an instance of 'std::bad_alloc'
what(): std::bad_alloc

BK_STOP 1527812025109

--------------------
content from stderr:

+ export BINDIR=/home/mcc/BenchKit/
+ BINDIR=/home/mcc/BenchKit/
++ pwd
+ export MODEL=/home/mcc/execution
+ MODEL=/home/mcc/execution
+ /home/mcc/BenchKit//runeclipse.sh /home/mcc/execution LTLFireability -its -ltsminpath /home/mcc/BenchKit//lts_install_dir/ -louvain -smt
+ ulimit -s 65536
+ [[ -z '' ]]
+ export LTSMIN_MEM_SIZE=8589934592
+ LTSMIN_MEM_SIZE=8589934592
+ /home/mcc/BenchKit//itstools/its-tools -consoleLog -data /home/mcc/execution/workspace -pnfolder /home/mcc/execution -examination LTLFireability -z3path /home/mcc/BenchKit//z3/bin/z3 -yices2path /home/mcc/BenchKit//yices/bin/yices -its -ltsminpath /home/mcc/BenchKit//lts_install_dir/ -louvain -smt -vmargs -Dosgi.locking=none -Declipse.stateSaveDelayInterval=-1 -Dosgi.configuration.area=/tmp/.eclipse -Xss8m -Xms40m -Xmx8192m -Dfile.encoding=UTF-8 -Dosgi.requiredJavaVersion=1.6
Jun 01, 2018 12:01:55 AM fr.lip6.move.gal.application.Application start
INFO: Running its-tools with arguments : [-pnfolder, /home/mcc/execution, -examination, LTLFireability, -z3path, /home/mcc/BenchKit//z3/bin/z3, -yices2path, /home/mcc/BenchKit//yices/bin/yices, -its, -ltsminpath, /home/mcc/BenchKit//lts_install_dir/, -louvain, -smt]
Jun 01, 2018 12:01:55 AM fr.lip6.move.gal.application.MccTranslator transformPNML
INFO: Parsing pnml file : /home/mcc/execution/model.pnml
Jun 01, 2018 12:01:56 AM fr.lip6.move.gal.nupn.PTNetReader loadFromXML
INFO: Load time of PNML (sax parser for PT used): 1092 ms
Jun 01, 2018 12:01:56 AM fr.lip6.move.gal.pnml.togal.PTGALTransformer handlePage
INFO: Transformed 1614 places.
Jun 01, 2018 12:01:57 AM fr.lip6.move.gal.pnml.togal.PTGALTransformer handlePage
INFO: Transformed 13500 transitions.
Jun 01, 2018 12:01:58 AM fr.lip6.move.gal.application.MccTranslator applyOrder
INFO: Applying decomposition
Jun 01, 2018 12:02:02 AM fr.lip6.move.gal.instantiate.GALRewriter flatten
INFO: Flatten gal took : 4152 ms
Jun 01, 2018 12:02:06 AM fr.lip6.move.gal.instantiate.GALRewriter flatten
INFO: Flatten gal took : 3553 ms
Begin: Fri Jun 1 00:02:10 2018

Computation of communities with the Newman-Girvan Modularity quality function

level 0:
start computation: Fri Jun 1 00:02:10 2018
network size: 1614 nodes, 18530 links, 27000 weight
quality increased from -0.0371846 to 0.17082
end computation: Fri Jun 1 00:02:10 2018
level 1:
start computation: Fri Jun 1 00:02:10 2018
network size: 181 nodes, 5549 links, 27000 weight
quality increased from 0.17082 to 0.242882
end computation: Fri Jun 1 00:02:10 2018
level 2:
start computation: Fri Jun 1 00:02:10 2018
network size: 7 nodes, 37 links, 27000 weight
quality increased from 0.242882 to 0.242954
end computation: Fri Jun 1 00:02:10 2018
level 3:
start computation: Fri Jun 1 00:02:10 2018
network size: 6 nodes, 30 links, 27000 weight
quality increased from 0.242954 to 0.242954
end computation: Fri Jun 1 00:02:10 2018
End: Fri Jun 1 00:02:10 2018
Total duration: 0 sec
0.242954
Jun 01, 2018 12:02:10 AM fr.lip6.move.gal.instantiate.CompositeBuilder decomposeWithOrder
INFO: Decomposing Gal with order
Jun 01, 2018 12:02:13 AM fr.lip6.move.gal.instantiate.GALRewriter flatten
INFO: Flatten gal took : 3148 ms
Jun 01, 2018 12:02:13 AM fr.lip6.move.gal.instantiate.CompositeBuilder rewriteArraysToAllowPartition
INFO: Rewriting arrays to variables to allow decomposition.
Jun 01, 2018 12:03:07 AM fr.lip6.move.gal.instantiate.Instantiator fuseIsomorphicEffects
INFO: Removed a total of 51811 redundant transitions.
Jun 01, 2018 12:03:08 AM fr.lip6.move.serialization.SerializationUtil systemToFile
INFO: Time to serialize gal into /home/mcc/execution/LTLFireability.pnml.gal : 182 ms
Jun 01, 2018 12:03:08 AM fr.lip6.move.serialization.SerializationUtil serializePropertiesForITSLTLTools
INFO: Time to serialize properties into /home/mcc/execution/LTLFireability.ltl : 48 ms
Jun 01, 2018 12:03:10 AM fr.lip6.move.gal.semantics.CompositeNextBuilder getNextForLabel
INFO: Semantic construction discarded 9203 identical transitions.
Jun 01, 2018 12:03:10 AM fr.lip6.move.gal.semantics.DeterministicNextBuilder getDeterministicNext
INFO: Input system was already deterministic with 4297 transitions.
Jun 01, 2018 12:03:10 AM fr.lip6.move.gal.gal2pins.Gal2PinsTransformerNext transform
INFO: Too many transitions (4297) to apply POR reductions. Disabling POR matrices.
Jun 01, 2018 12:03:11 AM fr.lip6.move.gal.gal2pins.Gal2PinsTransformerNext transform
INFO: Built C files in 2806ms conformant to PINS in folder :/home/mcc/execution
pins2lts-mc, 0.000: Registering PINS so language module
pins2lts-mc, 0.000, ** error **: out of memory trying to get 4294967296
java.lang.RuntimeException: Unexpected exception when executing ltsmin :CommandLine [args=[/home/mcc/BenchKit//lts_install_dir//bin/pins2lts-mc, ./gal.so, --threads=1, -p, --pins-guards, --when, --ltl, (((LTLAP2==true))U(<>((LTLAP3==true))))U(([]((LTLAP1==true)))U(<>((LTLAP4==true)))), --buchi-type=spotba], workingDir=/home/mcc/execution]
255
at fr.lip6.move.gal.application.LTSminRunner.checkProperty(LTSminRunner.java:167)
at fr.lip6.move.gal.application.LTSminRunner.access$9(LTSminRunner.java:122)
at fr.lip6.move.gal.application.LTSminRunner$1.run(LTSminRunner.java:91)
at java.lang.Thread.run(Thread.java:748)
ITS-tools command line returned an error code 134

Sequence of Actions to be Executed by the VM

This is useful if one wants to reexecute the tool in the VM from the submitted image disk.

set -x
# this is for BenchKit: configuration of major elements for the test
export BK_INPUT="PolyORBNT-PT-S10J80"
export BK_EXAMINATION="LTLFireability"
export BK_TOOL="itstoolsl"
export BK_RESULT_DIR="/tmp/BK_RESULTS/OUTPUTS"
export BK_TIME_CONFINEMENT="3600"
export BK_MEMORY_CONFINEMENT="16384"

# this is specific to your benchmark or test

export BIN_DIR="$HOME/BenchKit/bin"

# remove the execution directoty if it exists (to avoid increse of .vmdk images)
if [ -d execution ] ; then
rm -rf execution
fi

tar xzf /home/mcc/BenchKit/INPUTS/PolyORBNT-PT-S10J80.tgz
mv PolyORBNT-PT-S10J80 execution
cd execution
pwd
ls -lh

# this is for BenchKit: explicit launching of the test
echo "====================================================================="
echo " Generated by BenchKit 2-3637"
echo " Executing tool itstoolsl"
echo " Input is PolyORBNT-PT-S10J80, examination is LTLFireability"
echo " Time confinement is $BK_TIME_CONFINEMENT seconds"
echo " Memory confinement is 16384 MBytes"
echo " Number of cores is 4"
echo " Run identifier is r213-smll-152732264500464"
echo "====================================================================="
echo
echo "--------------------"
echo "content from stdout:"
echo
echo "=== Data for post analysis generated by BenchKit (invocation template)"
echo
if [ "LTLFireability" = "UpperBounds" ] ; then
echo "The expected result is a vector of positive values"
echo NUM_VECTOR
elif [ "LTLFireability" != "StateSpace" ] ; then
echo "The expected result is a vector of booleans"
echo BOOL_VECTOR
else
echo "no data necessary for post analysis"
fi
echo
if [ -f "LTLFireability.txt" ] ; then
echo "here is the order used to build the result vector(from text file)"
for x in $(grep Property LTLFireability.txt | cut -d ' ' -f 2 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ -f "LTLFireability.xml" ] ; then # for cunf (txt files deleted;-)
echo echo "here is the order used to build the result vector(from xml file)"
for x in $(grep '' LTLFireability.xml | cut -d '>' -f 2 | cut -d '<' -f 1 | sort -u) ; do
echo "FORMULA_NAME $x"
done
fi
echo
echo "=== Now, execution of the tool begins"
echo
echo -n "BK_START "
date -u +%s%3N
echo
timeout -s 9 $BK_TIME_CONFINEMENT bash -c "/home/mcc/BenchKit/BenchKit_head.sh 2> STDERR ; echo ; echo -n \"BK_STOP \" ; date -u +%s%3N"
if [ $? -eq 137 ] ; then
echo
echo "BK_TIME_CONFINEMENT_REACHED"
fi
echo
echo "--------------------"
echo "content from stderr:"
echo
cat STDERR ;