Execution Chart

We display below the execution chart for this examination (boot time has been removed).

Trace from the execution

Waiting for the VM to be ready (probing ssh)
......................
/home/mcc/execution
total 3.0M
-rw-r--r-- 1 mcc users 4.7K May 15 18:54 CTLCardinality.txt
-rw-r--r-- 1 mcc users 22K May 15 18:54 CTLCardinality.xml
-rw-r--r-- 1 mcc users 3.5K May 15 18:54 CTLFireability.txt
-rw-r--r-- 1 mcc users 17K May 15 18:54 CTLFireability.xml
-rw-r--r-- 1 mcc users 4.0K May 15 18:50 GenericPropertiesDefinition.xml
-rw-r--r-- 1 mcc users 5.9K May 15 18:50 GenericPropertiesVerdict.xml
-rw-r--r-- 1 mcc users 3.1K May 26 09:26 LTLCardinality.txt
-rw-r--r-- 1 mcc users 13K May 26 09:26 LTLCardinality.xml
-rw-r--r-- 1 mcc users 2.5K May 26 09:26 LTLFireability.txt
-rw-r--r-- 1 mcc users 11K May 26 09:26 LTLFireability.xml
-rw-r--r-- 1 mcc users 4.1K May 15 18:54 ReachabilityCardinality.txt
-rw-r--r-- 1 mcc users 17K May 15 18:54 ReachabilityCardinality.xml
-rw-r--r-- 1 mcc users 118 May 15 18:54 ReachabilityDeadlock.txt
-rw-r--r-- 1 mcc users 356 May 15 18:54 ReachabilityDeadlock.xml
-rw-r--r-- 1 mcc users 4.6K May 15 18:54 ReachabilityFireability.txt
-rw-r--r-- 1 mcc users 21K May 15 18:54 ReachabilityFireability.xml
-rw-r--r-- 1 mcc users 2.0K May 15 18:54 UpperBounds.txt
-rw-r--r-- 1 mcc users 4.0K May 15 18:54 UpperBounds.xml
-rw-r--r-- 1 mcc users 6 May 15 18:50 equiv_col
-rw-r--r-- 1 mcc users 10 May 15 18:50 instance
-rw-r--r-- 1 mcc users 6 May 15 18:50 iscolored
-rwxr-xr-x 1 mcc users 2.8M May 15 18:50 model.pnml
=====================================================================
Generated by BenchKit 2-3637
Executing tool itstoolsl
Input is HypertorusGrid-PT-d4k3p2b08, examination is LTLFireability
Time confinement is 3600 seconds
Memory confinement is 16384 MBytes
Number of cores is 4
Run identifier is r213-smll-152732264200308
=====================================================================

--------------------
content from stdout:

=== Data for post analysis generated by BenchKit (invocation template)

The expected result is a vector of booleans
BOOL_VECTOR

here is the order used to build the result vector(from text file)
FORMULA_NAME HypertorusGrid-PT-d4k3p2b08-LTLFireability-00
FORMULA_NAME HypertorusGrid-PT-d4k3p2b08-LTLFireability-01
FORMULA_NAME HypertorusGrid-PT-d4k3p2b08-LTLFireability-02
FORMULA_NAME HypertorusGrid-PT-d4k3p2b08-LTLFireability-03
FORMULA_NAME HypertorusGrid-PT-d4k3p2b08-LTLFireability-04
FORMULA_NAME HypertorusGrid-PT-d4k3p2b08-LTLFireability-05
FORMULA_NAME HypertorusGrid-PT-d4k3p2b08-LTLFireability-06
FORMULA_NAME HypertorusGrid-PT-d4k3p2b08-LTLFireability-07
FORMULA_NAME HypertorusGrid-PT-d4k3p2b08-LTLFireability-08
FORMULA_NAME HypertorusGrid-PT-d4k3p2b08-LTLFireability-09
FORMULA_NAME HypertorusGrid-PT-d4k3p2b08-LTLFireability-10
FORMULA_NAME HypertorusGrid-PT-d4k3p2b08-LTLFireability-11
FORMULA_NAME HypertorusGrid-PT-d4k3p2b08-LTLFireability-12
FORMULA_NAME HypertorusGrid-PT-d4k3p2b08-LTLFireability-13
FORMULA_NAME HypertorusGrid-PT-d4k3p2b08-LTLFireability-14
FORMULA_NAME HypertorusGrid-PT-d4k3p2b08-LTLFireability-15

=== Now, execution of the tool begins

BK_START 1527939370108

Converted graph to binary with : CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.louvain.binaries_1.0.0.201805241334/bin/convert-linux64, -i, /tmp/graph3618300456706882334.txt, -o, /tmp/graph3618300456706882334.bin, -w, /tmp/graph3618300456706882334.weights], workingDir=null]
Built communities with : CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.louvain.binaries_1.0.0.201805241334/bin/louvain-linux64, /tmp/graph3618300456706882334.bin, -l, -1, -v, -w, /tmp/graph3618300456706882334.weights, -q, 0, -e, 0.001], workingDir=null]
Using solver Z3 to compute partial order matrices.
Built C files in :
/home/mcc/execution
Invoking ITS tools like this :CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.201805241334/bin/its-ltl-linux64, --gc-threshold, 2000000, -i, /home/mcc/execution/LTLFireability.pnml.gal, -t, CGAL, -LTL, /home/mcc/execution/LTLFireability.ltl, -c, -stutter-deadlock], workingDir=/home/mcc/execution]

its-ltl command run as :

/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.201805241334/bin/its-ltl-linux64 --gc-threshold 2000000 -i /home/mcc/execution/LTLFireability.pnml.gal -t CGAL -LTL /home/mcc/execution/LTLFireability.ltl -c -stutter-deadlock
Read 16 LTL properties
Checking formula 0 : !((X(X(F(X(G("((i31.u593.po_d1_n1_3_1_2_1>=1)&&(i31.u36.pbl_2_1_2_1>=1))")))))))
Formula 0 simplified : !XXFXG"((i31.u593.po_d1_n1_3_1_2_1>=1)&&(i31.u36.pbl_2_1_2_1>=1))"
built 405 ordering constraints for composite.
built 72 ordering constraints for composite.
built 72 ordering constraints for composite.
built 72 ordering constraints for composite.
built 72 ordering constraints for composite.
built 72 ordering constraints for composite.
built 72 ordering constraints for composite.
built 72 ordering constraints for composite.
built 72 ordering constraints for composite.
built 72 ordering constraints for composite.
built 72 ordering constraints for composite.
built 72 ordering constraints for composite.
built 72 ordering constraints for composite.
built 72 ordering constraints for composite.
built 72 ordering constraints for composite.
built 72 ordering constraints for composite.
built 72 ordering constraints for composite.
built 72 ordering constraints for composite.
built 72 ordering constraints for composite.
built 72 ordering constraints for composite.
built 72 ordering constraints for composite.
built 72 ordering constraints for composite.
built 72 ordering constraints for composite.
built 72 ordering constraints for composite.
built 72 ordering constraints for composite.
built 72 ordering constraints for composite.
built 72 ordering constraints for composite.
built 72 ordering constraints for composite.
built 72 ordering constraints for composite.
built 72 ordering constraints for composite.
built 72 ordering constraints for composite.
built 72 ordering constraints for composite.
built 72 ordering constraints for composite.
built 72 ordering constraints for composite.
built 72 ordering constraints for composite.
built 72 ordering constraints for composite.
built 72 ordering constraints for composite.
built 72 ordering constraints for composite.
built 72 ordering constraints for composite.
built 72 ordering constraints for composite.
built 72 ordering constraints for composite.
built 72 ordering constraints for composite.
built 72 ordering constraints for composite.
built 72 ordering constraints for composite.
built 72 ordering constraints for composite.
built 72 ordering constraints for composite.
built 72 ordering constraints for composite.
built 72 ordering constraints for composite.
built 72 ordering constraints for composite.
built 72 ordering constraints for composite.
built 72 ordering constraints for composite.
built 72 ordering constraints for composite.
built 72 ordering constraints for composite.
built 72 ordering constraints for composite.
built 72 ordering constraints for composite.
built 72 ordering constraints for composite.
built 72 ordering constraints for composite.
Running compilation step : CommandLine [args=[gcc, -c, -I/home/mcc/BenchKit//lts_install_dir//include, -I., -std=c99, -fPIC, -O3, model.c], workingDir=/home/mcc/execution]
built 72 ordering constraints for composite.
built 72 ordering constraints for composite.
built 72 ordering constraints for composite.
built 72 ordering constraints for composite.
built 72 ordering constraints for composite.
built 72 ordering constraints for composite.
built 72 ordering constraints for composite.
built 72 ordering constraints for composite.
built 72 ordering constraints for composite.
built 72 ordering constraints for composite.
built 72 ordering constraints for composite.
built 72 ordering constraints for composite.
built 72 ordering constraints for composite.
built 72 ordering constraints for composite.
built 72 ordering constraints for composite.
built 72 ordering constraints for composite.
built 72 ordering constraints for composite.
built 72 ordering constraints for composite.
built 72 ordering constraints for composite.
built 72 ordering constraints for composite.
built 72 ordering constraints for composite.
built 72 ordering constraints for composite.
built 72 ordering constraints for composite.
built 72 ordering constraints for composite.
built 72 ordering constraints for composite.
Compilation finished in 82437 ms.
Running link step : CommandLine [args=[gcc, -shared, -o, gal.so, model.o], workingDir=/home/mcc/execution]
Link finished in 87 ms.
Running LTSmin : CommandLine [args=[/home/mcc/BenchKit//lts_install_dir//bin/pins2lts-mc, ./gal.so, --threads=1, --when, --ltl, X(X(<>(X([]((LTLAP0==true)))))), --buchi-type=spotba], workingDir=/home/mcc/execution]
LTSmin run took 16385 ms.
FORMULA HypertorusGrid-PT-d4k3p2b08-LTLFireability-00 FALSE TECHNIQUES PARTIAL_ORDER EXPLICIT LTSMIN SAT_SMT
Running LTSmin : CommandLine [args=[/home/mcc/BenchKit//lts_install_dir//bin/pins2lts-mc, ./gal.so, --threads=1, -p, --pins-guards, --when, --ltl, <>(<>((LTLAP1==true))), --buchi-type=spotba], workingDir=/home/mcc/execution]
WARNING : LTSmin timed out (>225 s) on command CommandLine [args=[/home/mcc/BenchKit//lts_install_dir//bin/pins2lts-mc, ./gal.so, --threads=1, -p, --pins-guards, --when, --ltl, <>(<>((LTLAP1==true))), --buchi-type=spotba], workingDir=/home/mcc/execution]
Running LTSmin : CommandLine [args=[/home/mcc/BenchKit//lts_install_dir//bin/pins2lts-mc, ./gal.so, --threads=1, -p, --pins-guards, --when, --ltl, (LTLAP2==true), --buchi-type=spotba], workingDir=/home/mcc/execution]
WARNING : LTSmin timed out (>225 s) on command CommandLine [args=[/home/mcc/BenchKit//lts_install_dir//bin/pins2lts-mc, ./gal.so, --threads=1, -p, --pins-guards, --when, --ltl, (LTLAP2==true), --buchi-type=spotba], workingDir=/home/mcc/execution]
Running LTSmin : CommandLine [args=[/home/mcc/BenchKit//lts_install_dir//bin/pins2lts-mc, ./gal.so, --threads=1, -p, --pins-guards, --when, --ltl, <>((LTLAP3==true)), --buchi-type=spotba], workingDir=/home/mcc/execution]
WARNING : LTSmin timed out (>225 s) on command CommandLine [args=[/home/mcc/BenchKit//lts_install_dir//bin/pins2lts-mc, ./gal.so, --threads=1, -p, --pins-guards, --when, --ltl, <>((LTLAP3==true)), --buchi-type=spotba], workingDir=/home/mcc/execution]
Running LTSmin : CommandLine [args=[/home/mcc/BenchKit//lts_install_dir//bin/pins2lts-mc, ./gal.so, --threads=1, -p, --pins-guards, --when, --ltl, [](((LTLAP4==true))U(((LTLAP5==true))U((LTLAP6==true)))), --buchi-type=spotba], workingDir=/home/mcc/execution]
WARNING : LTS min runner thread failed on error :java.lang.RuntimeException: Unexpected exception when executing ltsmin :CommandLine [args=[/home/mcc/BenchKit//lts_install_dir//bin/pins2lts-mc, ./gal.so, --threads=1, -p, --pins-guards, --when, --ltl, [](((LTLAP4==true))U(((LTLAP5==true))U((LTLAP6==true)))), --buchi-type=spotba], workingDir=/home/mcc/execution]
255
terminate called after throwing an instance of 'std::bad_alloc'
what(): std::bad_alloc

BK_STOP 1527940162330

--------------------
content from stderr:

+ export BINDIR=/home/mcc/BenchKit/
+ BINDIR=/home/mcc/BenchKit/
++ pwd
+ export MODEL=/home/mcc/execution
+ MODEL=/home/mcc/execution
+ /home/mcc/BenchKit//runeclipse.sh /home/mcc/execution LTLFireability -its -ltsminpath /home/mcc/BenchKit//lts_install_dir/ -louvain -smt
+ ulimit -s 65536
+ [[ -z '' ]]
+ export LTSMIN_MEM_SIZE=8589934592
+ LTSMIN_MEM_SIZE=8589934592
+ /home/mcc/BenchKit//itstools/its-tools -consoleLog -data /home/mcc/execution/workspace -pnfolder /home/mcc/execution -examination LTLFireability -z3path /home/mcc/BenchKit//z3/bin/z3 -yices2path /home/mcc/BenchKit//yices/bin/yices -its -ltsminpath /home/mcc/BenchKit//lts_install_dir/ -louvain -smt -vmargs -Dosgi.locking=none -Declipse.stateSaveDelayInterval=-1 -Dosgi.configuration.area=/tmp/.eclipse -Xss8m -Xms40m -Xmx8192m -Dfile.encoding=UTF-8 -Dosgi.requiredJavaVersion=1.6
Jun 02, 2018 11:36:12 AM fr.lip6.move.gal.application.Application start
INFO: Running its-tools with arguments : [-pnfolder, /home/mcc/execution, -examination, LTLFireability, -z3path, /home/mcc/BenchKit//z3/bin/z3, -yices2path, /home/mcc/BenchKit//yices/bin/yices, -its, -ltsminpath, /home/mcc/BenchKit//lts_install_dir/, -louvain, -smt]
Jun 02, 2018 11:36:12 AM fr.lip6.move.gal.application.MccTranslator transformPNML
INFO: Parsing pnml file : /home/mcc/execution/model.pnml
Jun 02, 2018 11:36:13 AM fr.lip6.move.gal.nupn.PTNetReader loadFromXML
INFO: Load time of PNML (sax parser for PT used): 424 ms
Jun 02, 2018 11:36:13 AM fr.lip6.move.gal.pnml.togal.PTGALTransformer handlePage
INFO: Transformed 2025 places.
Jun 02, 2018 11:36:13 AM fr.lip6.move.gal.pnml.togal.PTGALTransformer handlePage
INFO: Transformed 5184 transitions.
Jun 02, 2018 11:36:13 AM fr.lip6.move.gal.application.MccTranslator applyOrder
INFO: Applying decomposition
Jun 02, 2018 11:36:14 AM fr.lip6.move.gal.instantiate.GALRewriter flatten
INFO: Flatten gal took : 1227 ms
Jun 02, 2018 11:36:15 AM fr.lip6.move.gal.instantiate.GALRewriter flatten
INFO: Flatten gal took : 670 ms
Begin: Sat Jun 2 11:36:16 2018

Computation of communities with the Newman-Girvan Modularity quality function

level 0:
start computation: Sat Jun 2 11:36:16 2018
network size: 2025 nodes, 15552 links, 10368 weight
quality increased from -0.00106096 to 0.496528
end computation: Sat Jun 2 11:36:16 2018
level 1:
start computation: Sat Jun 2 11:36:16 2018
network size: 729 nodes, 3321 links, 10368 weight
quality increased from 0.496528 to 0.925154
end computation: Sat Jun 2 11:36:16 2018
level 2:
start computation: Sat Jun 2 11:36:16 2018
network size: 81 nodes, 729 links, 10368 weight
quality increased from 0.925154 to 0.925154
end computation: Sat Jun 2 11:36:16 2018
End: Sat Jun 2 11:36:16 2018
Total duration: 0 sec
0.925154
Jun 02, 2018 11:36:16 AM fr.lip6.move.gal.instantiate.CompositeBuilder decomposeWithOrder
INFO: Decomposing Gal with order
Jun 02, 2018 11:36:17 AM fr.lip6.move.gal.instantiate.GALRewriter flatten
INFO: Flatten gal took : 547 ms
Jun 02, 2018 11:36:17 AM fr.lip6.move.gal.instantiate.CompositeBuilder rewriteArraysToAllowPartition
INFO: Rewriting arrays to variables to allow decomposition.
Jun 02, 2018 11:36:19 AM fr.lip6.move.gal.instantiate.Instantiator fuseIsomorphicEffects
INFO: Removed a total of 7776 redundant transitions.
Jun 02, 2018 11:36:20 AM fr.lip6.move.serialization.SerializationUtil systemToFile
INFO: Time to serialize gal into /home/mcc/execution/LTLFireability.pnml.gal : 91 ms
Jun 02, 2018 11:36:20 AM fr.lip6.move.serialization.SerializationUtil serializePropertiesForITSLTLTools
INFO: Time to serialize properties into /home/mcc/execution/LTLFireability.ltl : 1 ms
Jun 02, 2018 11:36:21 AM fr.lip6.move.gal.semantics.DeterministicNextBuilder getDeterministicNext
INFO: Input system was already deterministic with 5184 transitions.
Jun 02, 2018 11:36:21 AM fr.lip6.move.gal.gal2pins.Gal2PinsTransformerNext transform
INFO: Too many transitions (5184) to apply POR reductions. Disabling POR matrices.
Jun 02, 2018 11:36:21 AM fr.lip6.move.gal.gal2pins.Gal2PinsTransformerNext transform
INFO: Built C files in 1370ms conformant to PINS in folder :/home/mcc/execution
pins2lts-mc, 0.000: Registering PINS so language module
pins2lts-mc, 0.000, ** error **: out of memory trying to get 4294967296
java.lang.RuntimeException: Unexpected exception when executing ltsmin :CommandLine [args=[/home/mcc/BenchKit//lts_install_dir//bin/pins2lts-mc, ./gal.so, --threads=1, -p, --pins-guards, --when, --ltl, [](((LTLAP4==true))U(((LTLAP5==true))U((LTLAP6==true)))), --buchi-type=spotba], workingDir=/home/mcc/execution]
255
at fr.lip6.move.gal.application.LTSminRunner.checkProperty(LTSminRunner.java:167)
at fr.lip6.move.gal.application.LTSminRunner.access$9(LTSminRunner.java:122)
at fr.lip6.move.gal.application.LTSminRunner$1.run(LTSminRunner.java:91)
at java.lang.Thread.run(Thread.java:748)
ITS-tools command line returned an error code 134

Sequence of Actions to be Executed by the VM

This is useful if one wants to reexecute the tool in the VM from the submitted image disk.

set -x
# this is for BenchKit: configuration of major elements for the test
export BK_INPUT="HypertorusGrid-PT-d4k3p2b08"
export BK_EXAMINATION="LTLFireability"
export BK_TOOL="itstoolsl"
export BK_RESULT_DIR="/tmp/BK_RESULTS/OUTPUTS"
export BK_TIME_CONFINEMENT="3600"
export BK_MEMORY_CONFINEMENT="16384"

# this is specific to your benchmark or test

export BIN_DIR="$HOME/BenchKit/bin"

# remove the execution directoty if it exists (to avoid increse of .vmdk images)
if [ -d execution ] ; then
rm -rf execution
fi

tar xzf /home/mcc/BenchKit/INPUTS/HypertorusGrid-PT-d4k3p2b08.tgz
mv HypertorusGrid-PT-d4k3p2b08 execution
cd execution
pwd
ls -lh

# this is for BenchKit: explicit launching of the test
echo "====================================================================="
echo " Generated by BenchKit 2-3637"
echo " Executing tool itstoolsl"
echo " Input is HypertorusGrid-PT-d4k3p2b08, examination is LTLFireability"
echo " Time confinement is $BK_TIME_CONFINEMENT seconds"
echo " Memory confinement is 16384 MBytes"
echo " Number of cores is 4"
echo " Run identifier is r213-smll-152732264200308"
echo "====================================================================="
echo
echo "--------------------"
echo "content from stdout:"
echo
echo "=== Data for post analysis generated by BenchKit (invocation template)"
echo
if [ "LTLFireability" = "UpperBounds" ] ; then
echo "The expected result is a vector of positive values"
echo NUM_VECTOR
elif [ "LTLFireability" != "StateSpace" ] ; then
echo "The expected result is a vector of booleans"
echo BOOL_VECTOR
else
echo "no data necessary for post analysis"
fi
echo
if [ -f "LTLFireability.txt" ] ; then
echo "here is the order used to build the result vector(from text file)"
for x in $(grep Property LTLFireability.txt | cut -d ' ' -f 2 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ -f "LTLFireability.xml" ] ; then # for cunf (txt files deleted;-)
echo echo "here is the order used to build the result vector(from xml file)"
for x in $(grep '' LTLFireability.xml | cut -d '>' -f 2 | cut -d '<' -f 1 | sort -u) ; do
echo "FORMULA_NAME $x"
done
fi
echo
echo "=== Now, execution of the tool begins"
echo
echo -n "BK_START "
date -u +%s%3N
echo
timeout -s 9 $BK_TIME_CONFINEMENT bash -c "/home/mcc/BenchKit/BenchKit_head.sh 2> STDERR ; echo ; echo -n \"BK_STOP \" ; date -u +%s%3N"
if [ $? -eq 137 ] ; then
echo
echo "BK_TIME_CONFINEMENT_REACHED"
fi
echo
echo "--------------------"
echo "content from stderr:"
echo
cat STDERR ;