Execution Chart

We display below the execution chart for this examination (boot time has been removed).

Trace from the execution

Waiting for the VM to be ready (probing ssh)
...................
/home/mcc/execution
total 14M
-rw-r--r-- 1 mcc users 4.2K May 15 18:54 CTLCardinality.txt
-rw-r--r-- 1 mcc users 19K May 15 18:54 CTLCardinality.xml
-rw-r--r-- 1 mcc users 3.8K May 15 18:54 CTLFireability.txt
-rw-r--r-- 1 mcc users 18K May 15 18:54 CTLFireability.xml
-rw-r--r-- 1 mcc users 4.0K May 15 18:50 GenericPropertiesDefinition.xml
-rw-r--r-- 1 mcc users 5.9K May 15 18:50 GenericPropertiesVerdict.xml
-rw-r--r-- 1 mcc users 2.8K May 26 09:26 LTLCardinality.txt
-rw-r--r-- 1 mcc users 11K May 26 09:26 LTLCardinality.xml
-rw-r--r-- 1 mcc users 2.4K May 26 09:26 LTLFireability.txt
-rw-r--r-- 1 mcc users 9.0K May 26 09:26 LTLFireability.xml
-rw-r--r-- 1 mcc users 5.4K May 15 18:54 ReachabilityCardinality.txt
-rw-r--r-- 1 mcc users 23K May 15 18:54 ReachabilityCardinality.xml
-rw-r--r-- 1 mcc users 117 May 15 18:54 ReachabilityDeadlock.txt
-rw-r--r-- 1 mcc users 355 May 15 18:54 ReachabilityDeadlock.xml
-rw-r--r-- 1 mcc users 3.9K May 15 18:54 ReachabilityFireability.txt
-rw-r--r-- 1 mcc users 17K May 15 18:54 ReachabilityFireability.xml
-rw-r--r-- 1 mcc users 2.0K May 15 18:54 UpperBounds.txt
-rw-r--r-- 1 mcc users 4.0K May 15 18:54 UpperBounds.xml
-rw-r--r-- 1 mcc users 6 May 15 18:50 equiv_col
-rw-r--r-- 1 mcc users 10 May 15 18:50 instance
-rw-r--r-- 1 mcc users 6 May 15 18:50 iscolored
-rwxr-xr-x 1 mcc users 14M May 15 18:50 model.pnml
=====================================================================
Generated by BenchKit 2-3637
Executing tool itstoolsl
Input is HypercubeGrid-PT-C5K3P3B15, examination is LTLFireability
Time confinement is 3600 seconds
Memory confinement is 16384 MBytes
Number of cores is 4
Run identifier is r213-smll-152732264200298
=====================================================================

--------------------
content from stdout:

=== Data for post analysis generated by BenchKit (invocation template)

The expected result is a vector of booleans
BOOL_VECTOR

here is the order used to build the result vector(from text file)
FORMULA_NAME HypercubeGrid-PT-C5K3P3B15-LTLFireability-00
FORMULA_NAME HypercubeGrid-PT-C5K3P3B15-LTLFireability-01
FORMULA_NAME HypercubeGrid-PT-C5K3P3B15-LTLFireability-02
FORMULA_NAME HypercubeGrid-PT-C5K3P3B15-LTLFireability-03
FORMULA_NAME HypercubeGrid-PT-C5K3P3B15-LTLFireability-04
FORMULA_NAME HypercubeGrid-PT-C5K3P3B15-LTLFireability-05
FORMULA_NAME HypercubeGrid-PT-C5K3P3B15-LTLFireability-06
FORMULA_NAME HypercubeGrid-PT-C5K3P3B15-LTLFireability-07
FORMULA_NAME HypercubeGrid-PT-C5K3P3B15-LTLFireability-08
FORMULA_NAME HypercubeGrid-PT-C5K3P3B15-LTLFireability-09
FORMULA_NAME HypercubeGrid-PT-C5K3P3B15-LTLFireability-10
FORMULA_NAME HypercubeGrid-PT-C5K3P3B15-LTLFireability-11
FORMULA_NAME HypercubeGrid-PT-C5K3P3B15-LTLFireability-12
FORMULA_NAME HypercubeGrid-PT-C5K3P3B15-LTLFireability-13
FORMULA_NAME HypercubeGrid-PT-C5K3P3B15-LTLFireability-14
FORMULA_NAME HypercubeGrid-PT-C5K3P3B15-LTLFireability-15

=== Now, execution of the tool begins

BK_START 1527936959540

Converted graph to binary with : CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.louvain.binaries_1.0.0.201805241334/bin/convert-linux64, -i, /tmp/graph1489324866629878590.txt, -o, /tmp/graph1489324866629878590.bin, -w, /tmp/graph1489324866629878590.weights], workingDir=null]
Built communities with : CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.louvain.binaries_1.0.0.201805241334/bin/louvain-linux64, /tmp/graph1489324866629878590.bin, -l, -1, -v, -w, /tmp/graph1489324866629878590.weights, -q, 0, -e, 0.001], workingDir=null]
Using solver Z3 to compute partial order matrices.
Built C files in :
/home/mcc/execution
Invoking ITS tools like this :CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.201805241334/bin/its-ltl-linux64, --gc-threshold, 2000000, -i, /home/mcc/execution/LTLFireability.pnml.gal, -t, CGAL, -LTL, /home/mcc/execution/LTLFireability.ltl, -c, -stutter-deadlock], workingDir=/home/mcc/execution]

its-ltl command run as :

/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.201805241334/bin/its-ltl-linux64 --gc-threshold 2000000 -i /home/mcc/execution/LTLFireability.pnml.gal -t CGAL -LTL /home/mcc/execution/LTLFireability.ltl -c -stutter-deadlock
Read 16 LTL properties
Running compilation step : CommandLine [args=[gcc, -c, -I/home/mcc/BenchKit//lts_install_dir//include, -I., -std=c99, -fPIC, -O3, model.c], workingDir=/home/mcc/execution]
Checking formula 0 : !(((F(G(F("((i79.u1807.pi_d5_n1_2_3_2_2_1>=1)&&(i79.u152.pbl_2_3_2_2_1>=1))"))))U(X(("((i40.u990.pi_d5_n1_3_1_1_2_3>=1)&&(i40.u172.pbl_3_1_1_2_3>=1))")U("((i81.u328.pi_d1_n1_2_3_2_2_3>=1)&&(i81.u154.pbl_2_3_2_2_3>=1))")))))
Formula 0 simplified : !(FGF"((i79.u1807.pi_d5_n1_2_3_2_2_1>=1)&&(i79.u152.pbl_2_3_2_2_1>=1))" U X("((i40.u990.pi_d5_n1_3_1_1_2_3>=1)&&(i40.u172.pbl_3_1_1_2_3>=1))" U "((i81.u328.pi_d1_n1_2_3_2_2_3>=1)&&(i81.u154.pbl_2_3_2_2_3>=1))"))
built 777 ordering constraints for composite.
built 110 ordering constraints for composite.
built 218 ordering constraints for composite.
built 218 ordering constraints for composite.
built 218 ordering constraints for composite.
built 218 ordering constraints for composite.
built 218 ordering constraints for composite.
built 218 ordering constraints for composite.
built 218 ordering constraints for composite.
built 218 ordering constraints for composite.
built 218 ordering constraints for composite.
built 218 ordering constraints for composite.
built 218 ordering constraints for composite.
built 218 ordering constraints for composite.
built 218 ordering constraints for composite.
built 218 ordering constraints for composite.
built 110 ordering constraints for composite.
built 218 ordering constraints for composite.
built 218 ordering constraints for composite.
built 110 ordering constraints for composite.
built 218 ordering constraints for composite.
built 218 ordering constraints for composite.
built 110 ordering constraints for composite.
built 218 ordering constraints for composite.
built 218 ordering constraints for composite.
built 218 ordering constraints for composite.
built 218 ordering constraints for composite.
built 218 ordering constraints for composite.
built 218 ordering constraints for composite.
built 110 ordering constraints for composite.
built 218 ordering constraints for composite.
built 218 ordering constraints for composite.
built 218 ordering constraints for composite.
built 218 ordering constraints for composite.
built 218 ordering constraints for composite.
built 218 ordering constraints for composite.
built 110 ordering constraints for composite.
built 110 ordering constraints for composite.
built 218 ordering constraints for composite.
built 218 ordering constraints for composite.
built 218 ordering constraints for composite.
built 218 ordering constraints for composite.
built 110 ordering constraints for composite.
built 218 ordering constraints for composite.
built 218 ordering constraints for composite.
built 218 ordering constraints for composite.
built 218 ordering constraints for composite.
built 218 ordering constraints for composite.
built 218 ordering constraints for composite.
built 218 ordering constraints for composite.
built 218 ordering constraints for composite.
built 218 ordering constraints for composite.
built 218 ordering constraints for composite.
built 218 ordering constraints for composite.
built 218 ordering constraints for composite.
built 218 ordering constraints for composite.
built 218 ordering constraints for composite.
built 218 ordering constraints for composite.
built 218 ordering constraints for composite.
built 218 ordering constraints for composite.
built 218 ordering constraints for composite.
built 218 ordering constraints for composite.
built 218 ordering constraints for composite.
built 218 ordering constraints for composite.
built 218 ordering constraints for composite.
built 218 ordering constraints for composite.
built 218 ordering constraints for composite.
built 218 ordering constraints for composite.
built 218 ordering constraints for composite.
built 110 ordering constraints for composite.
built 218 ordering constraints for composite.
built 218 ordering constraints for composite.
built 218 ordering constraints for composite.
built 218 ordering constraints for composite.
built 218 ordering constraints for composite.
built 218 ordering constraints for composite.
built 218 ordering constraints for composite.
built 218 ordering constraints for composite.
built 218 ordering constraints for composite.
built 218 ordering constraints for composite.
built 218 ordering constraints for composite.
built 218 ordering constraints for composite.
built 218 ordering constraints for composite.
built 218 ordering constraints for composite.
built 218 ordering constraints for composite.
built 218 ordering constraints for composite.
built 218 ordering constraints for composite.
built 218 ordering constraints for composite.
built 218 ordering constraints for composite.
built 218 ordering constraints for composite.
built 218 ordering constraints for composite.
built 218 ordering constraints for composite.
built 110 ordering constraints for composite.
built 218 ordering constraints for composite.
built 218 ordering constraints for composite.
built 218 ordering constraints for composite.
built 218 ordering constraints for composite.
built 218 ordering constraints for composite.
built 218 ordering constraints for composite.
built 218 ordering constraints for composite.
built 218 ordering constraints for composite.
built 218 ordering constraints for composite.
built 218 ordering constraints for composite.
built 218 ordering constraints for composite.
built 218 ordering constraints for composite.
built 110 ordering constraints for composite.
built 218 ordering constraints for composite.
built 218 ordering constraints for composite.
built 218 ordering constraints for composite.
built 218 ordering constraints for composite.
built 218 ordering constraints for composite.
built 218 ordering constraints for composite.
built 218 ordering constraints for composite.
built 218 ordering constraints for composite.
built 218 ordering constraints for composite.
built 110 ordering constraints for composite.
built 218 ordering constraints for composite.
built 218 ordering constraints for composite.
built 218 ordering constraints for composite.
built 110 ordering constraints for composite.
built 218 ordering constraints for composite.
built 110 ordering constraints for composite.
built 218 ordering constraints for composite.
built 110 ordering constraints for composite.
built 218 ordering constraints for composite.
built 218 ordering constraints for composite.
built 218 ordering constraints for composite.
built 218 ordering constraints for composite.
built 218 ordering constraints for composite.
built 218 ordering constraints for composite.
WARNING : LTS min runner thread failed on error :java.lang.RuntimeException: Compilation or link of executable timed out.java.util.concurrent.TimeoutException: Subprocess running CommandLine [args=[gcc, -c, -I/home/mcc/BenchKit//lts_install_dir//include, -I., -std=c99, -fPIC, -O3, model.c], workingDir=/home/mcc/execution] killed by timeout after 400 SECONDS
terminate called after throwing an instance of 'std::bad_alloc'
what(): std::bad_alloc

BK_STOP 1527937952306

--------------------
content from stderr:

+ export BINDIR=/home/mcc/BenchKit/
+ BINDIR=/home/mcc/BenchKit/
++ pwd
+ export MODEL=/home/mcc/execution
+ MODEL=/home/mcc/execution
+ /home/mcc/BenchKit//runeclipse.sh /home/mcc/execution LTLFireability -its -ltsminpath /home/mcc/BenchKit//lts_install_dir/ -louvain -smt
+ ulimit -s 65536
+ [[ -z '' ]]
+ export LTSMIN_MEM_SIZE=8589934592
+ LTSMIN_MEM_SIZE=8589934592
+ /home/mcc/BenchKit//itstools/its-tools -consoleLog -data /home/mcc/execution/workspace -pnfolder /home/mcc/execution -examination LTLFireability -z3path /home/mcc/BenchKit//z3/bin/z3 -yices2path /home/mcc/BenchKit//yices/bin/yices -its -ltsminpath /home/mcc/BenchKit//lts_install_dir/ -louvain -smt -vmargs -Dosgi.locking=none -Declipse.stateSaveDelayInterval=-1 -Dosgi.configuration.area=/tmp/.eclipse -Xss8m -Xms40m -Xmx8192m -Dfile.encoding=UTF-8 -Dosgi.requiredJavaVersion=1.6
Jun 02, 2018 10:56:02 AM fr.lip6.move.gal.application.Application start
INFO: Running its-tools with arguments : [-pnfolder, /home/mcc/execution, -examination, LTLFireability, -z3path, /home/mcc/BenchKit//z3/bin/z3, -yices2path, /home/mcc/BenchKit//yices/bin/yices, -its, -ltsminpath, /home/mcc/BenchKit//lts_install_dir/, -louvain, -smt]
Jun 02, 2018 10:56:02 AM fr.lip6.move.gal.application.MccTranslator transformPNML
INFO: Parsing pnml file : /home/mcc/execution/model.pnml
Jun 02, 2018 10:56:03 AM fr.lip6.move.gal.nupn.PTNetReader loadFromXML
INFO: Load time of PNML (sax parser for PT used): 1001 ms
Jun 02, 2018 10:56:03 AM fr.lip6.move.gal.pnml.togal.PTGALTransformer handlePage
INFO: Transformed 9153 places.
Jun 02, 2018 10:56:04 AM fr.lip6.move.gal.pnml.togal.PTGALTransformer handlePage
INFO: Transformed 25110 transitions.
Jun 02, 2018 10:56:04 AM fr.lip6.move.gal.application.MccTranslator applyOrder
INFO: Applying decomposition
Jun 02, 2018 10:56:08 AM fr.lip6.move.gal.instantiate.GALRewriter flatten
INFO: Flatten gal took : 3979 ms
Jun 02, 2018 10:56:11 AM fr.lip6.move.gal.instantiate.GALRewriter flatten
INFO: Flatten gal took : 3032 ms
Begin: Sat Jun 2 10:56:15 2018

Computation of communities with the Newman-Girvan Modularity quality function

level 0:
start computation: Sat Jun 2 10:56:15 2018
network size: 9153 nodes, 72900 links, 50220 weight
quality increased from -0.000313781 to 0.498939
end computation: Sat Jun 2 10:56:15 2018
level 1:
start computation: Sat Jun 2 10:56:15 2018
network size: 3483 nodes, 14823 links, 50220 weight
quality increased from 0.498939 to 0.963626
end computation: Sat Jun 2 10:56:15 2018
level 2:
start computation: Sat Jun 2 10:56:15 2018
network size: 243 nodes, 1863 links, 50220 weight
quality increased from 0.963626 to 0.964305
end computation: Sat Jun 2 10:56:15 2018
level 3:
start computation: Sat Jun 2 10:56:15 2018
network size: 130 nodes, 1430 links, 50220 weight
quality increased from 0.964305 to 0.96431
end computation: Sat Jun 2 10:56:15 2018
level 4:
start computation: Sat Jun 2 10:56:15 2018
network size: 129 nodes, 1425 links, 50220 weight
quality increased from 0.96431 to 0.96431
end computation: Sat Jun 2 10:56:15 2018
End: Sat Jun 2 10:56:15 2018
Total duration: 0 sec
0.96431
Jun 02, 2018 10:56:15 AM fr.lip6.move.gal.instantiate.CompositeBuilder decomposeWithOrder
INFO: Decomposing Gal with order
Jun 02, 2018 10:56:19 AM fr.lip6.move.gal.instantiate.GALRewriter flatten
INFO: Flatten gal took : 3755 ms
Jun 02, 2018 10:56:20 AM fr.lip6.move.gal.instantiate.CompositeBuilder rewriteArraysToAllowPartition
INFO: Rewriting arrays to variables to allow decomposition.
Jun 02, 2018 10:56:42 AM fr.lip6.move.gal.instantiate.Instantiator fuseIsomorphicEffects
INFO: Removed a total of 38880 redundant transitions.
Jun 02, 2018 10:56:44 AM fr.lip6.move.serialization.SerializationUtil systemToFile
INFO: Time to serialize gal into /home/mcc/execution/LTLFireability.pnml.gal : 497 ms
Jun 02, 2018 10:56:44 AM fr.lip6.move.serialization.SerializationUtil serializePropertiesForITSLTLTools
INFO: Time to serialize properties into /home/mcc/execution/LTLFireability.ltl : 13 ms
Jun 02, 2018 10:56:47 AM fr.lip6.move.gal.semantics.DeterministicNextBuilder getDeterministicNext
INFO: Input system was already deterministic with 25110 transitions.
Jun 02, 2018 10:56:47 AM fr.lip6.move.gal.gal2pins.Gal2PinsTransformerNext transform
INFO: Too many transitions (25110) to apply POR reductions. Disabling POR matrices.
Jun 02, 2018 10:56:49 AM fr.lip6.move.gal.gal2pins.Gal2PinsTransformerNext transform
INFO: Built C files in 5669ms conformant to PINS in folder :/home/mcc/execution
java.lang.RuntimeException: Compilation or link of executable timed out.java.util.concurrent.TimeoutException: Subprocess running CommandLine [args=[gcc, -c, -I/home/mcc/BenchKit//lts_install_dir//include, -I., -std=c99, -fPIC, -O3, model.c], workingDir=/home/mcc/execution] killed by timeout after 400 SECONDS
at fr.lip6.move.gal.application.LTSminRunner$1.run(LTSminRunner.java:78)
at java.lang.Thread.run(Thread.java:748)
ITS-tools command line returned an error code 134

Sequence of Actions to be Executed by the VM

This is useful if one wants to reexecute the tool in the VM from the submitted image disk.

set -x
# this is for BenchKit: configuration of major elements for the test
export BK_INPUT="HypercubeGrid-PT-C5K3P3B15"
export BK_EXAMINATION="LTLFireability"
export BK_TOOL="itstoolsl"
export BK_RESULT_DIR="/tmp/BK_RESULTS/OUTPUTS"
export BK_TIME_CONFINEMENT="3600"
export BK_MEMORY_CONFINEMENT="16384"

# this is specific to your benchmark or test

export BIN_DIR="$HOME/BenchKit/bin"

# remove the execution directoty if it exists (to avoid increse of .vmdk images)
if [ -d execution ] ; then
rm -rf execution
fi

tar xzf /home/mcc/BenchKit/INPUTS/HypercubeGrid-PT-C5K3P3B15.tgz
mv HypercubeGrid-PT-C5K3P3B15 execution
cd execution
pwd
ls -lh

# this is for BenchKit: explicit launching of the test
echo "====================================================================="
echo " Generated by BenchKit 2-3637"
echo " Executing tool itstoolsl"
echo " Input is HypercubeGrid-PT-C5K3P3B15, examination is LTLFireability"
echo " Time confinement is $BK_TIME_CONFINEMENT seconds"
echo " Memory confinement is 16384 MBytes"
echo " Number of cores is 4"
echo " Run identifier is r213-smll-152732264200298"
echo "====================================================================="
echo
echo "--------------------"
echo "content from stdout:"
echo
echo "=== Data for post analysis generated by BenchKit (invocation template)"
echo
if [ "LTLFireability" = "UpperBounds" ] ; then
echo "The expected result is a vector of positive values"
echo NUM_VECTOR
elif [ "LTLFireability" != "StateSpace" ] ; then
echo "The expected result is a vector of booleans"
echo BOOL_VECTOR
else
echo "no data necessary for post analysis"
fi
echo
if [ -f "LTLFireability.txt" ] ; then
echo "here is the order used to build the result vector(from text file)"
for x in $(grep Property LTLFireability.txt | cut -d ' ' -f 2 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ -f "LTLFireability.xml" ] ; then # for cunf (txt files deleted;-)
echo echo "here is the order used to build the result vector(from xml file)"
for x in $(grep '' LTLFireability.xml | cut -d '>' -f 2 | cut -d '<' -f 1 | sort -u) ; do
echo "FORMULA_NAME $x"
done
fi
echo
echo "=== Now, execution of the tool begins"
echo
echo -n "BK_START "
date -u +%s%3N
echo
timeout -s 9 $BK_TIME_CONFINEMENT bash -c "/home/mcc/BenchKit/BenchKit_head.sh 2> STDERR ; echo ; echo -n \"BK_STOP \" ; date -u +%s%3N"
if [ $? -eq 137 ] ; then
echo
echo "BK_TIME_CONFINEMENT_REACHED"
fi
echo
echo "--------------------"
echo "content from stderr:"
echo
cat STDERR ;