About the Execution of ITS-Tools.L for Angiogenesis-PT-05
Execution Summary | |||||
Max Memory Used (MB) |
Time wait (ms) | CPU Usage (ms) | I/O Wait (ms) | Computed Result | Execution Status |
15755.980 | 35274.00 | 48085.00 | 3082.00 | FFFFFFFFFFFFFFFF | normal |
Execution Chart
We display below the execution chart for this examination (boot time has been removed).
Trace from the execution
Waiting for the VM to be ready (probing ssh)
............................
/home/mcc/execution
total 200K
-rw-r--r-- 1 mcc users 3.1K May 15 18:54 CTLCardinality.txt
-rw-r--r-- 1 mcc users 15K May 15 18:54 CTLCardinality.xml
-rw-r--r-- 1 mcc users 2.6K May 15 18:54 CTLFireability.txt
-rw-r--r-- 1 mcc users 19K May 15 18:54 CTLFireability.xml
-rw-r--r-- 1 mcc users 4.0K May 15 18:49 GenericPropertiesDefinition.xml
-rw-r--r-- 1 mcc users 6.0K May 15 18:49 GenericPropertiesVerdict.xml
-rw-r--r-- 1 mcc users 2.6K May 26 09:26 LTLCardinality.txt
-rw-r--r-- 1 mcc users 12K May 26 09:26 LTLCardinality.xml
-rw-r--r-- 1 mcc users 1.8K May 26 09:26 LTLFireability.txt
-rw-r--r-- 1 mcc users 8.0K May 26 09:26 LTLFireability.xml
-rw-r--r-- 1 mcc users 4.4K May 15 18:54 ReachabilityCardinality.txt
-rw-r--r-- 1 mcc users 21K May 15 18:54 ReachabilityCardinality.xml
-rw-r--r-- 1 mcc users 109 May 15 18:54 ReachabilityDeadlock.txt
-rw-r--r-- 1 mcc users 347 May 15 18:54 ReachabilityDeadlock.xml
-rw-r--r-- 1 mcc users 2.4K May 15 18:54 ReachabilityFireability.txt
-rw-r--r-- 1 mcc users 14K May 15 18:54 ReachabilityFireability.xml
-rw-r--r-- 1 mcc users 1.7K May 15 18:54 UpperBounds.txt
-rw-r--r-- 1 mcc users 3.8K May 15 18:54 UpperBounds.xml
-rw-r--r-- 1 mcc users 6 May 15 18:49 equiv_col
-rw-r--r-- 1 mcc users 3 May 15 18:49 instance
-rw-r--r-- 1 mcc users 6 May 15 18:49 iscolored
-rw-r--r-- 1 mcc users 33K May 15 18:49 model.pnml
=====================================================================
Generated by BenchKit 2-3637
Executing tool itstoolsl
Input is Angiogenesis-PT-05, examination is LTLFireability
Time confinement is 3600 seconds
Memory confinement is 16384 MBytes
Number of cores is 4
Run identifier is r201-qhx1-152732197900004
=====================================================================
--------------------
content from stdout:
=== Data for post analysis generated by BenchKit (invocation template)
The expected result is a vector of booleans
BOOL_VECTOR
here is the order used to build the result vector(from text file)
FORMULA_NAME Angiogenesis-PT-05-LTLFireability-00
FORMULA_NAME Angiogenesis-PT-05-LTLFireability-01
FORMULA_NAME Angiogenesis-PT-05-LTLFireability-02
FORMULA_NAME Angiogenesis-PT-05-LTLFireability-03
FORMULA_NAME Angiogenesis-PT-05-LTLFireability-04
FORMULA_NAME Angiogenesis-PT-05-LTLFireability-05
FORMULA_NAME Angiogenesis-PT-05-LTLFireability-06
FORMULA_NAME Angiogenesis-PT-05-LTLFireability-07
FORMULA_NAME Angiogenesis-PT-05-LTLFireability-08
FORMULA_NAME Angiogenesis-PT-05-LTLFireability-09
FORMULA_NAME Angiogenesis-PT-05-LTLFireability-10
FORMULA_NAME Angiogenesis-PT-05-LTLFireability-11
FORMULA_NAME Angiogenesis-PT-05-LTLFireability-12
FORMULA_NAME Angiogenesis-PT-05-LTLFireability-13
FORMULA_NAME Angiogenesis-PT-05-LTLFireability-14
FORMULA_NAME Angiogenesis-PT-05-LTLFireability-15
=== Now, execution of the tool begins
BK_START 1527414169386
Converted graph to binary with : CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.louvain.binaries_1.0.0.201805241334/bin/convert-linux64, -i, /tmp/graph2440429110778411182.txt, -o, /tmp/graph2440429110778411182.bin, -w, /tmp/graph2440429110778411182.weights], workingDir=null]
Built communities with : CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.louvain.binaries_1.0.0.201805241334/bin/louvain-linux64, /tmp/graph2440429110778411182.bin, -l, -1, -v, -w, /tmp/graph2440429110778411182.weights, -q, 0, -e, 0.001], workingDir=null]
Using solver Z3 to compute partial order matrices.
Built C files in :
/home/mcc/execution
Invoking ITS tools like this :CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.201805241334/bin/its-ltl-linux64, --gc-threshold, 2000000, -i, /home/mcc/execution/LTLFireability.pnml.gal, -t, CGAL, -LTL, /home/mcc/execution/LTLFireability.ltl, -c, -stutter-deadlock], workingDir=/home/mcc/execution]
its-ltl command run as :
/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.201805241334/bin/its-ltl-linux64 --gc-threshold 2000000 -i /home/mcc/execution/LTLFireability.pnml.gal -t CGAL -LTL /home/mcc/execution/LTLFireability.ltl -c -stutter-deadlock
Read 16 LTL properties
Checking formula 0 : !((G("((i0.u4.KdStarGStarP3>=1)&&(i1.u3.P3k>=1))")))
Formula 0 simplified : !G"((i0.u4.KdStarGStarP3>=1)&&(i1.u3.P3k>=1))"
built 19 ordering constraints for composite.
built 24 ordering constraints for composite.
built 14 ordering constraints for composite.
built 14 ordering constraints for composite.
built 8 ordering constraints for composite.
built 24 ordering constraints for composite.
Presburger conditions satisfied. Using coverability to approximate state space in K-Induction.
// Phase 1: matrix 64 rows 39 cols
invariant :u9:KdStarPg + u9:KdStarPgStar + u9:KdStarPgStarP2 + i3:u7:KdStarGStarPg + i3:u7:KdStarGStarPgStar + i3:u7:KdStarGStarPgStarP2 + i5:u8:KdStarGStarPgStarP3 + i5:u8:KdStarGStarPgStarP3P2 + i5:u10:GStarPgP3 + i5:u10:KdStarGStarPgP3 + i5:u10:Pg = 5
invariant :i6:u11:Pten + i6:u11:PtP3 + i6:u12:PtP2 + i6:u12:PtP3P2 = 5
invariant :i3:u1:DAGE + i3:u1:Enz = 5
invariant :i6:u0:Akt + i6:u0:AktP3 + i6:u0:AktStar = 5
invariant :u5:KdStarGStarP3k + u5:KdStarGStarP3kStar + u5:KdStarGStarP3kStarP2 + i1:u3:GStarP3kP3 + i1:u3:KdStarGStarP3kP3 + i1:u3:P3k + i1:u6:KdStarGStarP3kStarP3 + i1:u6:KdStarGStarP3kStarP3P2 = 5
invariant :-1'u9:KdStarPg + -1'u9:KdStarPgStar + -1'u9:KdStarPgStarP2 + i0:u2:Gab1 + i0:u2:GP3 + i0:u2:KdStarG + i0:u2:KdStarGStar + i0:u4:KdStarGP3 + i0:u4:KdStarGStarP3 + i1:u3:GStarP3 + -1'i1:u3:P3k + -1'i5:u10:Pg = -5
invariant :-1'u5:KdStarGStarP3k + -1'u5:KdStarGStarP3kStar + u9:KdStarPgStarP2 + -1'i0:u2:Gab1 + -1'i0:u2:KdStarG + -1'i0:u2:KdStarGStar + i1:u6:KdStarGStarP3kStarP3P2 + i3:u1:DAG + -1'i3:u1:Enz + -1'i3:u7:KdStarGStarPg + -1'i3:u7:KdStarGStarPgStar + i5:u8:KdStarGStarPgStarP3P2 + i6:u0:AktP3 + i6:u0:Pip3 + i6:u11:PtP3 + i6:u12:Pip2 + i6:u12:PtP2 + 2'i6:u12:PtP3P2 = -5
invariant :u5:KdStarGStarP3k + u5:KdStarGStarP3kStar + u5:KdStarGStarP3kStarP2 + 2'u9:KdStarPg + 2'u9:KdStarPgStar + 2'u9:KdStarPgStarP2 + -1'i0:u2:Gab1 + -1'i0:u2:GP3 + i0:u4:KdStar + -1'i1:u3:GStarP3 + i1:u3:KdStarGStarP3kP3 + i1:u3:P3k + i1:u6:KdStarGStarP3kStarP3 + i1:u6:KdStarGStarP3kStarP3P2 + i3:u7:KdStarGStarPg + i3:u7:KdStarGStarPgStar + i3:u7:KdStarGStarPgStarP2 + i5:u8:KdStarGStarPgStarP3 + i5:u8:KdStarGStarPgStarP3P2 + i5:u10:KdStarGStarPgP3 + i5:u10:Pg = 10
Reverse transition relation is NOT exact ! Due to transitions k55, i0.u2.k2, i0.u4.k7, i6.u12.k60, Intersection with reachable at each step enabled. (destroyed/reverse/intersect/total) :0/60/4/64
Computing Next relation with stutter on 36 deadlock states
3 unique states visited
3 strongly connected components in search stack
3 transitions explored
3 items max in DFS search stack
614 ticks for the emptiness check
Model ,|S| ,Time ,Mem(kb) ,fin. SDD ,fin. DDD ,peak SDD ,peak DDD ,SDD Hom ,SDD cache peak ,DDD Hom ,DDD cachepeak ,SHom cache
STATS,0,6.24539,83924,1,0,112406,15591,1002,198557,228,77765,206947
an accepting run exists (use option '-e' to print it)
Formula 0 is FALSE accepting run found.
FORMULA Angiogenesis-PT-05-LTLFireability-00 FALSE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL USE_NUPN
Checking formula 1 : !(((F(F(F("(i1.u3.KdStarGStarP3kP3>=1)"))))U((G("((i0.u2.Gab1>=1)&&(i0.u4.KdStar>=1))"))U(G("(i3.u1.DAGE>=1)")))))
Formula 1 simplified : !(F"(i1.u3.KdStarGStarP3kP3>=1)" U (G"((i0.u2.Gab1>=1)&&(i0.u4.KdStar>=1))" U G"(i3.u1.DAGE>=1)"))
Computing Next relation with stutter on 36 deadlock states
2 unique states visited
2 strongly connected components in search stack
2 transitions explored
2 items max in DFS search stack
72 ticks for the emptiness check
Model ,|S| ,Time ,Mem(kb) ,fin. SDD ,fin. DDD ,peak SDD ,peak DDD ,SDD Hom ,SDD cache peak ,DDD Hom ,DDD cachepeak ,SHom cache
STATS,0,6.99301,93836,1,0,128144,15624,1100,227125,230,78132,219586
an accepting run exists (use option '-e' to print it)
Formula 1 is FALSE accepting run found.
FORMULA Angiogenesis-PT-05-LTLFireability-01 FALSE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL USE_NUPN
Checking formula 2 : !((("(i6.u12.PtP3P2>=1)")U("((i1.u6.KdStarGStarP3kStarP3>=1)&&(i6.u12.Pip2>=1))")))
Formula 2 simplified : !("(i6.u12.PtP3P2>=1)" U "((i1.u6.KdStarGStarP3kStarP3>=1)&&(i6.u12.Pip2>=1))")
Computing Next relation with stutter on 36 deadlock states
3 unique states visited
3 strongly connected components in search stack
3 transitions explored
3 items max in DFS search stack
1 ticks for the emptiness check
Model ,|S| ,Time ,Mem(kb) ,fin. SDD ,fin. DDD ,peak SDD ,peak DDD ,SDD Hom ,SDD cache peak ,DDD Hom ,DDD cachepeak ,SHom cache
STATS,0,6.99647,94092,1,0,128144,15624,1118,227125,230,78132,219610
an accepting run exists (use option '-e' to print it)
Formula 2 is FALSE accepting run found.
FORMULA Angiogenesis-PT-05-LTLFireability-02 FALSE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL USE_NUPN
Checking formula 3 : !((X(F((F("(i0.u4.KdStarGP3>=1)"))U(G("((i5.u10.GStarPgP3>=1)&&(i0.u4.KdStar>=1))"))))))
Formula 3 simplified : !XF(F"(i0.u4.KdStarGP3>=1)" U G"((i5.u10.GStarPgP3>=1)&&(i0.u4.KdStar>=1))")
Computing Next relation with stutter on 36 deadlock states
Running compilation step : CommandLine [args=[gcc, -c, -I/home/mcc/BenchKit//lts_install_dir//include, -I., -std=c99, -fPIC, -O3, model.c], workingDir=/home/mcc/execution]
Compilation finished in 2468 ms.
Running link step : CommandLine [args=[gcc, -shared, -o, gal.so, model.o], workingDir=/home/mcc/execution]
Link finished in 77 ms.
Running LTSmin : CommandLine [args=[/home/mcc/BenchKit//lts_install_dir//bin/pins2lts-mc, ./gal.so, --threads=1, --when, --ltl, X(<>((<>((LTLAP6==true)))U([]((LTLAP7==true))))), --buchi-type=spotba], workingDir=/home/mcc/execution]
LTSmin run took 97 ms.
FORMULA Angiogenesis-PT-05-LTLFireability-03 FALSE TECHNIQUES PARTIAL_ORDER EXPLICIT LTSMIN SAT_SMT
Running LTSmin : CommandLine [args=[/home/mcc/BenchKit//lts_install_dir//bin/pins2lts-mc, ./gal.so, --threads=1, -p, --pins-guards, --when, --ltl, (LTLAP8==true), --buchi-type=spotba], workingDir=/home/mcc/execution]
LTSmin run took 75 ms.
FORMULA Angiogenesis-PT-05-LTLFireability-04 FALSE TECHNIQUES PARTIAL_ORDER EXPLICIT LTSMIN SAT_SMT
Running LTSmin : CommandLine [args=[/home/mcc/BenchKit//lts_install_dir//bin/pins2lts-mc, ./gal.so, --threads=1, --when, --ltl, <>(<>(<>(<>(X((LTLAP9==true)))))), --buchi-type=spotba], workingDir=/home/mcc/execution]
LTSmin run took 60 ms.
FORMULA Angiogenesis-PT-05-LTLFireability-05 FALSE TECHNIQUES PARTIAL_ORDER EXPLICIT LTSMIN SAT_SMT
Running LTSmin : CommandLine [args=[/home/mcc/BenchKit//lts_install_dir//bin/pins2lts-mc, ./gal.so, --threads=1, -p, --pins-guards, --when, --ltl, (LTLAP10==true), --buchi-type=spotba], workingDir=/home/mcc/execution]
LTSmin run took 53 ms.
FORMULA Angiogenesis-PT-05-LTLFireability-06 FALSE TECHNIQUES PARTIAL_ORDER EXPLICIT LTSMIN SAT_SMT
Running LTSmin : CommandLine [args=[/home/mcc/BenchKit//lts_install_dir//bin/pins2lts-mc, ./gal.so, --threads=1, --when, --ltl, ([](X(<>((LTLAP6==true)))))U(<>((LTLAP11==true))), --buchi-type=spotba], workingDir=/home/mcc/execution]
LTSmin run took 53 ms.
FORMULA Angiogenesis-PT-05-LTLFireability-07 FALSE TECHNIQUES PARTIAL_ORDER EXPLICIT LTSMIN SAT_SMT
Running LTSmin : CommandLine [args=[/home/mcc/BenchKit//lts_install_dir//bin/pins2lts-mc, ./gal.so, --threads=1, -p, --pins-guards, --when, --ltl, []((LTLAP12==true)), --buchi-type=spotba], workingDir=/home/mcc/execution]
LTSmin run took 67 ms.
FORMULA Angiogenesis-PT-05-LTLFireability-08 FALSE TECHNIQUES PARTIAL_ORDER EXPLICIT LTSMIN SAT_SMT
Running LTSmin : CommandLine [args=[/home/mcc/BenchKit//lts_install_dir//bin/pins2lts-mc, ./gal.so, --threads=1, --when, --ltl, [](X([](((LTLAP9==true))U((LTLAP13==true))))), --buchi-type=spotba], workingDir=/home/mcc/execution]
LTSmin run took 69 ms.
FORMULA Angiogenesis-PT-05-LTLFireability-09 FALSE TECHNIQUES PARTIAL_ORDER EXPLICIT LTSMIN SAT_SMT
Running LTSmin : CommandLine [args=[/home/mcc/BenchKit//lts_install_dir//bin/pins2lts-mc, ./gal.so, --threads=1, --when, --ltl, <>(X((<>((LTLAP14==true)))U(X((LTLAP1==true))))), --buchi-type=spotba], workingDir=/home/mcc/execution]
LTSmin run took 53 ms.
FORMULA Angiogenesis-PT-05-LTLFireability-10 FALSE TECHNIQUES PARTIAL_ORDER EXPLICIT LTSMIN SAT_SMT
Running LTSmin : CommandLine [args=[/home/mcc/BenchKit//lts_install_dir//bin/pins2lts-mc, ./gal.so, --threads=1, --when, --ltl, X((X((LTLAP12==true)))U(<>(<>((LTLAP15==true))))), --buchi-type=spotba], workingDir=/home/mcc/execution]
LTSmin run took 52 ms.
FORMULA Angiogenesis-PT-05-LTLFireability-11 FALSE TECHNIQUES PARTIAL_ORDER EXPLICIT LTSMIN SAT_SMT
Running LTSmin : CommandLine [args=[/home/mcc/BenchKit//lts_install_dir//bin/pins2lts-mc, ./gal.so, --threads=1, -p, --pins-guards, --when, --ltl, (LTLAP15==true), --buchi-type=spotba], workingDir=/home/mcc/execution]
LTSmin run took 108 ms.
FORMULA Angiogenesis-PT-05-LTLFireability-12 FALSE TECHNIQUES PARTIAL_ORDER EXPLICIT LTSMIN SAT_SMT
Running LTSmin : CommandLine [args=[/home/mcc/BenchKit//lts_install_dir//bin/pins2lts-mc, ./gal.so, --threads=1, -p, --pins-guards, --when, --ltl, (LTLAP16==true), --buchi-type=spotba], workingDir=/home/mcc/execution]
LTSmin run took 56 ms.
FORMULA Angiogenesis-PT-05-LTLFireability-13 FALSE TECHNIQUES PARTIAL_ORDER EXPLICIT LTSMIN SAT_SMT
Running LTSmin : CommandLine [args=[/home/mcc/BenchKit//lts_install_dir//bin/pins2lts-mc, ./gal.so, --threads=1, -p, --pins-guards, --when, --ltl, (LTLAP15==true), --buchi-type=spotba], workingDir=/home/mcc/execution]
LTSmin run took 78 ms.
FORMULA Angiogenesis-PT-05-LTLFireability-14 FALSE TECHNIQUES PARTIAL_ORDER EXPLICIT LTSMIN SAT_SMT
Running LTSmin : CommandLine [args=[/home/mcc/BenchKit//lts_install_dir//bin/pins2lts-mc, ./gal.so, --threads=1, --when, --ltl, X(<>((LTLAP17==true))), --buchi-type=spotba], workingDir=/home/mcc/execution]
LTSmin run took 52 ms.
FORMULA Angiogenesis-PT-05-LTLFireability-15 FALSE TECHNIQUES PARTIAL_ORDER EXPLICIT LTSMIN SAT_SMT
ITS tools runner thread asked to quit. Dying gracefully.
BK_STOP 1527414204660
--------------------
content from stderr:
+ export BINDIR=/home/mcc/BenchKit/
+ BINDIR=/home/mcc/BenchKit/
++ pwd
+ export MODEL=/home/mcc/execution
+ MODEL=/home/mcc/execution
+ /home/mcc/BenchKit//runeclipse.sh /home/mcc/execution LTLFireability -its -ltsminpath /home/mcc/BenchKit//lts_install_dir/ -louvain -smt
+ ulimit -s 65536
+ [[ -z '' ]]
+ export LTSMIN_MEM_SIZE=8589934592
+ LTSMIN_MEM_SIZE=8589934592
+ /home/mcc/BenchKit//itstools/its-tools -consoleLog -data /home/mcc/execution/workspace -pnfolder /home/mcc/execution -examination LTLFireability -z3path /home/mcc/BenchKit//z3/bin/z3 -yices2path /home/mcc/BenchKit//yices/bin/yices -its -ltsminpath /home/mcc/BenchKit//lts_install_dir/ -louvain -smt -vmargs -Dosgi.locking=none -Declipse.stateSaveDelayInterval=-1 -Dosgi.configuration.area=/tmp/.eclipse -Xss8m -Xms40m -Xmx8192m -Dfile.encoding=UTF-8 -Dosgi.requiredJavaVersion=1.6
May 27, 2018 9:43:06 AM fr.lip6.move.gal.application.Application start
INFO: Running its-tools with arguments : [-pnfolder, /home/mcc/execution, -examination, LTLFireability, -z3path, /home/mcc/BenchKit//z3/bin/z3, -yices2path, /home/mcc/BenchKit//yices/bin/yices, -its, -ltsminpath, /home/mcc/BenchKit//lts_install_dir/, -louvain, -smt]
May 27, 2018 9:43:06 AM fr.lip6.move.gal.application.MccTranslator transformPNML
INFO: Parsing pnml file : /home/mcc/execution/model.pnml
May 27, 2018 9:43:06 AM fr.lip6.move.gal.nupn.PTNetReader loadFromXML
INFO: Load time of PNML (sax parser for PT used): 63 ms
May 27, 2018 9:43:06 AM fr.lip6.move.gal.pnml.togal.PTGALTransformer handlePage
INFO: Transformed 39 places.
May 27, 2018 9:43:07 AM fr.lip6.move.gal.pnml.togal.PTGALTransformer handlePage
INFO: Transformed 64 transitions.
May 27, 2018 9:43:07 AM fr.lip6.move.serialization.SerializationUtil systemToFile
INFO: Time to serialize gal into /home/mcc/execution/model.pnml.img.gal : 17 ms
May 27, 2018 9:43:07 AM fr.lip6.move.gal.application.MccTranslator applyOrder
INFO: Applying decomposition
May 27, 2018 9:43:07 AM fr.lip6.move.gal.instantiate.GALRewriter flatten
INFO: Flatten gal took : 56 ms
May 27, 2018 9:43:07 AM fr.lip6.move.gal.instantiate.GALRewriter flatten
INFO: Flatten gal took : 27 ms
Begin: Sun May 27 09:43:07 2018
Computation of communities with the Newman-Girvan Modularity quality function
level 0:
start computation: Sun May 27 09:43:07 2018
network size: 39 nodes, 138 links, 128 weight
quality increased from -0.0310669 to 0.420563
end computation: Sun May 27 09:43:07 2018
level 1:
start computation: Sun May 27 09:43:07 2018
network size: 13 nodes, 69 links, 128 weight
quality increased from 0.420563 to 0.494049
end computation: Sun May 27 09:43:07 2018
level 2:
start computation: Sun May 27 09:43:07 2018
network size: 7 nodes, 39 links, 128 weight
quality increased from 0.494049 to 0.494049
end computation: Sun May 27 09:43:07 2018
End: Sun May 27 09:43:07 2018
Total duration: 0 sec
0.494049
May 27, 2018 9:43:07 AM fr.lip6.move.gal.instantiate.CompositeBuilder decomposeWithOrder
INFO: Decomposing Gal with order
May 27, 2018 9:43:07 AM fr.lip6.move.gal.instantiate.GALRewriter flatten
INFO: Flatten gal took : 42 ms
May 27, 2018 9:43:07 AM fr.lip6.move.gal.instantiate.CompositeBuilder rewriteArraysToAllowPartition
INFO: Rewriting arrays to variables to allow decomposition.
May 27, 2018 9:43:07 AM fr.lip6.move.gal.instantiate.Instantiator fuseIsomorphicEffects
INFO: Removed a total of 39 redundant transitions.
May 27, 2018 9:43:07 AM fr.lip6.move.serialization.SerializationUtil systemToFile
INFO: Time to serialize gal into /home/mcc/execution/LTLFireability.pnml.gal : 5 ms
May 27, 2018 9:43:07 AM fr.lip6.move.serialization.SerializationUtil serializePropertiesForITSLTLTools
INFO: Time to serialize properties into /home/mcc/execution/LTLFireability.ltl : 2 ms
May 27, 2018 9:43:07 AM fr.lip6.move.gal.semantics.DeterministicNextBuilder getDeterministicNext
INFO: Input system was already deterministic with 64 transitions.
May 27, 2018 9:43:08 AM fr.lip6.move.gal.gal2smt.bmc.KInductionSolver computeAndDeclareInvariants
INFO: Computed 8 place invariants in 19 ms
May 27, 2018 9:43:08 AM fr.lip6.move.gal.gal2smt.bmc.KInductionSolver init
INFO: Proved 39 variables to be positive in 229 ms
May 27, 2018 9:43:08 AM fr.lip6.move.gal.gal2smt.bmc.NecessaryEnablingsolver computeAblingMatrix
INFO: Computing symmetric may disable matrix : 64 transitions.
May 27, 2018 9:43:08 AM fr.lip6.move.gal.gal2smt.bmc.NecessaryEnablingsolver printStats
INFO: Computation of disable matrix completed :0/64 took 3 ms. Total solver calls (SAT/UNSAT): 0(0/0)
May 27, 2018 9:43:08 AM fr.lip6.move.gal.gal2smt.bmc.NecessaryEnablingsolver printStats
INFO: Computation of Complete disable matrix. took 6 ms. Total solver calls (SAT/UNSAT): 0(0/0)
May 27, 2018 9:43:08 AM fr.lip6.move.gal.gal2smt.bmc.NecessaryEnablingsolver computeAblingMatrix
INFO: Computing symmetric may enable matrix : 64 transitions.
May 27, 2018 9:43:08 AM fr.lip6.move.gal.gal2smt.bmc.NecessaryEnablingsolver printStats
INFO: Computation of Complete enable matrix. took 2 ms. Total solver calls (SAT/UNSAT): 0(0/0)
May 27, 2018 9:43:10 AM fr.lip6.move.gal.gal2smt.bmc.NecessaryEnablingsolver computeCoEnablingMatrix
INFO: Computing symmetric co enabling matrix : 64 transitions.
May 27, 2018 9:43:11 AM fr.lip6.move.gal.gal2smt.bmc.NecessaryEnablingsolver printStats
INFO: Computation of co-enabling matrix(7/64) took 1202 ms. Total solver calls (SAT/UNSAT): 353(353/0)
May 27, 2018 9:43:14 AM fr.lip6.move.gal.gal2smt.bmc.NecessaryEnablingsolver printStats
INFO: Computation of co-enabling matrix(45/64) took 4239 ms. Total solver calls (SAT/UNSAT): 1297(1297/0)
May 27, 2018 9:43:15 AM fr.lip6.move.gal.gal2smt.bmc.NecessaryEnablingsolver printStats
INFO: Computation of Finished co-enabling matrix. took 4922 ms. Total solver calls (SAT/UNSAT): 1365(1365/0)
May 27, 2018 9:43:15 AM fr.lip6.move.gal.gal2smt.bmc.NecessaryEnablingsolver computeDoNotAccord
INFO: Computing Do-Not-Accords matrix : 64 transitions.
May 27, 2018 9:43:19 AM fr.lip6.move.gal.gal2smt.bmc.NecessaryEnablingsolver printStats
INFO: Computation of Completed DNA matrix. took 4045 ms. Total solver calls (SAT/UNSAT): 371(0/371)
May 27, 2018 9:43:19 AM fr.lip6.move.gal.gal2pins.Gal2PinsTransformerNext transform
INFO: Built C files in 11695ms conformant to PINS in folder :/home/mcc/execution
Sequence of Actions to be Executed by the VM
This is useful if one wants to reexecute the tool in the VM from the submitted image disk.
set -x
# this is for BenchKit: configuration of major elements for the test
export BK_INPUT="Angiogenesis-PT-05"
export BK_EXAMINATION="LTLFireability"
export BK_TOOL="itstoolsl"
export BK_RESULT_DIR="/tmp/BK_RESULTS/OUTPUTS"
export BK_TIME_CONFINEMENT="3600"
export BK_MEMORY_CONFINEMENT="16384"
# this is specific to your benchmark or test
export BIN_DIR="$HOME/BenchKit/bin"
# remove the execution directoty if it exists (to avoid increse of .vmdk images)
if [ -d execution ] ; then
rm -rf execution
fi
tar xzf /home/mcc/BenchKit/INPUTS/Angiogenesis-PT-05.tgz
mv Angiogenesis-PT-05 execution
cd execution
pwd
ls -lh
# this is for BenchKit: explicit launching of the test
echo "====================================================================="
echo " Generated by BenchKit 2-3637"
echo " Executing tool itstoolsl"
echo " Input is Angiogenesis-PT-05, examination is LTLFireability"
echo " Time confinement is $BK_TIME_CONFINEMENT seconds"
echo " Memory confinement is 16384 MBytes"
echo " Number of cores is 4"
echo " Run identifier is r201-qhx1-152732197900004"
echo "====================================================================="
echo
echo "--------------------"
echo "content from stdout:"
echo
echo "=== Data for post analysis generated by BenchKit (invocation template)"
echo
if [ "LTLFireability" = "UpperBounds" ] ; then
echo "The expected result is a vector of positive values"
echo NUM_VECTOR
elif [ "LTLFireability" != "StateSpace" ] ; then
echo "The expected result is a vector of booleans"
echo BOOL_VECTOR
else
echo "no data necessary for post analysis"
fi
echo
if [ -f "LTLFireability.txt" ] ; then
echo "here is the order used to build the result vector(from text file)"
for x in $(grep Property LTLFireability.txt | cut -d ' ' -f 2 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ -f "LTLFireability.xml" ] ; then # for cunf (txt files deleted;-)
echo echo "here is the order used to build the result vector(from xml file)"
for x in $(grep '
echo "FORMULA_NAME $x"
done
fi
echo
echo "=== Now, execution of the tool begins"
echo
echo -n "BK_START "
date -u +%s%3N
echo
timeout -s 9 $BK_TIME_CONFINEMENT bash -c "/home/mcc/BenchKit/BenchKit_head.sh 2> STDERR ; echo ; echo -n \"BK_STOP \" ; date -u +%s%3N"
if [ $? -eq 137 ] ; then
echo
echo "BK_TIME_CONFINEMENT_REACHED"
fi
echo
echo "--------------------"
echo "content from stderr:"
echo
cat STDERR ;