Execution Chart

We display below the execution chart for this examination (boot time has been removed).

Trace from the execution

Waiting for the VM to be ready (probing ssh)
......................
/home/mcc/execution
total 676K
-rw-r--r-- 1 mcc users 3.5K May 15 18:54 CTLCardinality.txt
-rw-r--r-- 1 mcc users 18K May 15 18:54 CTLCardinality.xml
-rw-r--r-- 1 mcc users 2.8K May 15 18:54 CTLFireability.txt
-rw-r--r-- 1 mcc users 18K May 15 18:54 CTLFireability.xml
-rw-r--r-- 1 mcc users 4.0K May 15 18:50 GenericPropertiesDefinition.xml
-rw-r--r-- 1 mcc users 5.9K May 15 18:50 GenericPropertiesVerdict.xml
-rw-r--r-- 1 mcc users 2.6K May 15 18:54 LTLCardinality.txt
-rw-r--r-- 1 mcc users 12K May 15 18:54 LTLCardinality.xml
-rw-r--r-- 1 mcc users 2.0K May 15 18:54 LTLFireability.txt
-rw-r--r-- 1 mcc users 9.0K May 15 18:54 LTLFireability.xml
-rw-r--r-- 1 mcc users 3.9K May 15 18:54 ReachabilityCardinality.txt
-rw-r--r-- 1 mcc users 19K May 15 18:54 ReachabilityCardinality.xml
-rw-r--r-- 1 mcc users 111 May 15 18:54 ReachabilityDeadlock.txt
-rw-r--r-- 1 mcc users 349 May 15 18:54 ReachabilityDeadlock.xml
-rw-r--r-- 1 mcc users 3.1K May 15 18:54 ReachabilityFireability.txt
-rw-r--r-- 1 mcc users 18K May 15 18:54 ReachabilityFireability.xml
-rw-r--r-- 1 mcc users 1.7K May 15 18:54 UpperBounds.txt
-rw-r--r-- 1 mcc users 3.8K May 15 18:54 UpperBounds.xml
-rw-r--r-- 1 mcc users 6 May 15 18:50 equiv_col
-rw-r--r-- 1 mcc users 7 May 15 18:50 instance
-rw-r--r-- 1 mcc users 6 May 15 18:50 iscolored
-rwxr-xr-x 1 mcc users 505K May 15 18:50 model.pnml
=====================================================================
Generated by BenchKit 2-3637
Executing tool itstoolsl
Input is SquareGrid-PT-080408, examination is StateSpace
Time confinement is 3600 seconds
Memory confinement is 16384 MBytes
Number of cores is 4
Run identifier is r165-smll-152705516300190
=====================================================================

--------------------
content from stdout:

=== Data for post analysis generated by BenchKit (invocation template)

no data necessary for post analysis


=== Now, execution of the tool begins

BK_START 1527475999454

Converted graph to binary with : CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.louvain.binaries_1.0.0.201805241334/bin/convert-linux64, -i, /tmp/graph7858561852621990019.txt, -o, /tmp/graph7858561852621990019.bin, -w, /tmp/graph7858561852621990019.weights], workingDir=null]
Built communities with : CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.louvain.binaries_1.0.0.201805241334/bin/louvain-linux64, /tmp/graph7858561852621990019.bin, -l, -1, -v, -w, /tmp/graph7858561852621990019.weights, -q, 0, -e, 0.001], workingDir=null]
Invoking ITS tools like this :CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.201805241334/bin/its-reach-linux64, --gc-threshold, 2000000, --quiet, -i, /home/mcc/execution/StateSpace.pnml.gal, -t, CGAL, --stats], workingDir=/home/mcc/execution]

its-reach command run as :

/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.201805241334/bin/its-reach-linux64 --gc-threshold 2000000 --quiet -i /home/mcc/execution/StateSpace.pnml.gal -t CGAL --stats
built 90 ordering constraints for composite.
built 38 ordering constraints for composite.
built 20 ordering constraints for composite.
built 38 ordering constraints for composite.
built 38 ordering constraints for composite.
built 20 ordering constraints for composite.
built 38 ordering constraints for composite.
built 20 ordering constraints for composite.
built 72 ordering constraints for composite.
built 38 ordering constraints for composite.
built 72 ordering constraints for composite.
built 38 ordering constraints for composite.
built 38 ordering constraints for composite.
built 72 ordering constraints for composite.
built 38 ordering constraints for composite.
built 38 ordering constraints for composite.
built 38 ordering constraints for composite.
built 38 ordering constraints for composite.
built 38 ordering constraints for composite.
built 72 ordering constraints for composite.
built 38 ordering constraints for composite.
built 38 ordering constraints for composite.
built 38 ordering constraints for composite.
built 38 ordering constraints for composite.
built 38 ordering constraints for composite.
built 20 ordering constraints for composite.
built 38 ordering constraints for composite.
built 38 ordering constraints for composite.
built 38 ordering constraints for composite.
built 38 ordering constraints for composite.
built 38 ordering constraints for composite.
*
Cache Stats : size=107374184 --- Peak size=0
Cache hit ratio : 0% (0/0)
*
GSHom Stats : size unicity table = 3698
sizeof(_GShom):16
sizeof(SIdentity):16
Current/Peak number of SDD nodes in unicity table :9914265/9914265
sizeof(_GSDD):48
*
Cache Stats : size=85821911

Cache hit ratio : 0%
*
GHom Stats : size unicity table = 224
sizeof(_GHom):24
sizeof(Identity):24
Peak number of DDD nodes in unicity table :4367218
sizeof(_GDDD):8
sizeof(DDD::edge_t):8
sizeof(DDD::val_t):2

BK_TIME_CONFINEMENT_REACHED

--------------------
content from stderr:

+ export BINDIR=/home/mcc/BenchKit/
+ BINDIR=/home/mcc/BenchKit/
++ pwd
+ export MODEL=/home/mcc/execution
+ MODEL=/home/mcc/execution
+ /home/mcc/BenchKit//runeclipse.sh /home/mcc/execution StateSpace -its -ltsminpath /home/mcc/BenchKit//lts_install_dir/ -louvain -smt
+ ulimit -s 65536
+ [[ -z '' ]]
+ export LTSMIN_MEM_SIZE=8589934592
+ LTSMIN_MEM_SIZE=8589934592
+ /home/mcc/BenchKit//itstools/its-tools -consoleLog -data /home/mcc/execution/workspace -pnfolder /home/mcc/execution -examination StateSpace -z3path /home/mcc/BenchKit//z3/bin/z3 -yices2path /home/mcc/BenchKit//yices/bin/yices -its -ltsminpath /home/mcc/BenchKit//lts_install_dir/ -louvain -smt -vmargs -Dosgi.locking=none -Declipse.stateSaveDelayInterval=-1 -Dosgi.configuration.area=/tmp/.eclipse -Xss8m -Xms40m -Xmx8192m -Dfile.encoding=UTF-8 -Dosgi.requiredJavaVersion=1.6
May 28, 2018 2:53:22 AM fr.lip6.move.gal.application.Application start
INFO: Running its-tools with arguments : [-pnfolder, /home/mcc/execution, -examination, StateSpace, -z3path, /home/mcc/BenchKit//z3/bin/z3, -yices2path, /home/mcc/BenchKit//yices/bin/yices, -its, -ltsminpath, /home/mcc/BenchKit//lts_install_dir/, -louvain, -smt]
May 28, 2018 2:53:22 AM fr.lip6.move.gal.application.MccTranslator transformPNML
INFO: Parsing pnml file : /home/mcc/execution/model.pnml
May 28, 2018 2:53:22 AM fr.lip6.move.gal.nupn.PTNetReader loadFromXML
INFO: Load time of PNML (sax parser for PT used): 178 ms
May 28, 2018 2:53:22 AM fr.lip6.move.gal.pnml.togal.PTGALTransformer handlePage
INFO: Transformed 896 places.
May 28, 2018 2:53:22 AM fr.lip6.move.gal.pnml.togal.PTGALTransformer handlePage
INFO: Transformed 1056 transitions.
May 28, 2018 2:53:22 AM fr.lip6.move.serialization.SerializationUtil systemToFile
INFO: Time to serialize gal into /home/mcc/execution/model.pnml.img.gal : 45 ms
May 28, 2018 2:53:22 AM fr.lip6.move.gal.application.MccTranslator applyOrder
INFO: Applying decomposition
May 28, 2018 2:53:23 AM fr.lip6.move.gal.instantiate.GALRewriter flatten
INFO: Flatten gal took : 522 ms
May 28, 2018 2:53:23 AM fr.lip6.move.gal.instantiate.GALRewriter flatten
INFO: Flatten gal took : 231 ms
Begin: Mon May 28 02:53:23 2018

Computation of communities with the Newman-Girvan Modularity quality function

level 0:
start computation: Mon May 28 02:53:23 2018
network size: 896 nodes, 4288 links, 2112 weight
quality increased from -0.00162133 to 0.49538
end computation: Mon May 28 02:53:23 2018
level 1:
start computation: Mon May 28 02:53:23 2018
network size: 352 nodes, 1440 links, 2112 weight
quality increased from 0.49538 to 0.878293
end computation: Mon May 28 02:53:23 2018
level 2:
start computation: Mon May 28 02:53:23 2018
network size: 64 nodes, 288 links, 2112 weight
quality increased from 0.878293 to 0.89225
end computation: Mon May 28 02:53:23 2018
level 3:
start computation: Mon May 28 02:53:23 2018
network size: 32 nodes, 160 links, 2112 weight
quality increased from 0.89225 to 0.892365
end computation: Mon May 28 02:53:23 2018
level 4:
start computation: Mon May 28 02:53:23 2018
network size: 30 nodes, 150 links, 2112 weight
quality increased from 0.892365 to 0.892365
end computation: Mon May 28 02:53:23 2018
End: Mon May 28 02:53:23 2018
Total duration: 0 sec
0.892365
May 28, 2018 2:53:24 AM fr.lip6.move.gal.instantiate.CompositeBuilder decomposeWithOrder
INFO: Decomposing Gal with order
May 28, 2018 2:53:24 AM fr.lip6.move.gal.instantiate.GALRewriter flatten
INFO: Flatten gal took : 244 ms
May 28, 2018 2:53:24 AM fr.lip6.move.gal.instantiate.CompositeBuilder rewriteArraysToAllowPartition
INFO: Rewriting arrays to variables to allow decomposition.
May 28, 2018 2:53:24 AM fr.lip6.move.gal.instantiate.Instantiator fuseIsomorphicEffects
INFO: Removed a total of 1024 redundant transitions.
May 28, 2018 2:53:25 AM fr.lip6.move.serialization.SerializationUtil systemToFile
INFO: Time to serialize gal into /home/mcc/execution/StateSpace.pnml.gal : 23 ms

Sequence of Actions to be Executed by the VM

This is useful if one wants to reexecute the tool in the VM from the submitted image disk.

set -x
# this is for BenchKit: configuration of major elements for the test
export BK_INPUT="SquareGrid-PT-080408"
export BK_EXAMINATION="StateSpace"
export BK_TOOL="itstoolsl"
export BK_RESULT_DIR="/tmp/BK_RESULTS/OUTPUTS"
export BK_TIME_CONFINEMENT="3600"
export BK_MEMORY_CONFINEMENT="16384"

# this is specific to your benchmark or test

export BIN_DIR="$HOME/BenchKit/bin"

# remove the execution directoty if it exists (to avoid increse of .vmdk images)
if [ -d execution ] ; then
rm -rf execution
fi

tar xzf /home/mcc/BenchKit/INPUTS/SquareGrid-PT-080408.tgz
mv SquareGrid-PT-080408 execution
cd execution
pwd
ls -lh

# this is for BenchKit: explicit launching of the test
echo "====================================================================="
echo " Generated by BenchKit 2-3637"
echo " Executing tool itstoolsl"
echo " Input is SquareGrid-PT-080408, examination is StateSpace"
echo " Time confinement is $BK_TIME_CONFINEMENT seconds"
echo " Memory confinement is 16384 MBytes"
echo " Number of cores is 4"
echo " Run identifier is r165-smll-152705516300190"
echo "====================================================================="
echo
echo "--------------------"
echo "content from stdout:"
echo
echo "=== Data for post analysis generated by BenchKit (invocation template)"
echo
if [ "StateSpace" = "UpperBounds" ] ; then
echo "The expected result is a vector of positive values"
echo NUM_VECTOR
elif [ "StateSpace" != "StateSpace" ] ; then
echo "The expected result is a vector of booleans"
echo BOOL_VECTOR
else
echo "no data necessary for post analysis"
fi
echo
if [ -f "StateSpace.txt" ] ; then
echo "here is the order used to build the result vector(from text file)"
for x in $(grep Property StateSpace.txt | cut -d ' ' -f 2 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ -f "StateSpace.xml" ] ; then # for cunf (txt files deleted;-)
echo echo "here is the order used to build the result vector(from xml file)"
for x in $(grep '' StateSpace.xml | cut -d '>' -f 2 | cut -d '<' -f 1 | sort -u) ; do
echo "FORMULA_NAME $x"
done
fi
echo
echo "=== Now, execution of the tool begins"
echo
echo -n "BK_START "
date -u +%s%3N
echo
timeout -s 9 $BK_TIME_CONFINEMENT bash -c "/home/mcc/BenchKit/BenchKit_head.sh 2> STDERR ; echo ; echo -n \"BK_STOP \" ; date -u +%s%3N"
if [ $? -eq 137 ] ; then
echo
echo "BK_TIME_CONFINEMENT_REACHED"
fi
echo
echo "--------------------"
echo "content from stderr:"
echo
cat STDERR ;