Execution Chart

We display below the execution chart for this examination (boot time has been removed).

Trace from the execution

Waiting for the VM to be ready (probing ssh)
....................
/home/mcc/execution
total 244K
-rw-r--r-- 1 mcc users 3.3K May 15 18:54 CTLCardinality.txt
-rw-r--r-- 1 mcc users 19K May 15 18:54 CTLCardinality.xml
-rw-r--r-- 1 mcc users 2.3K May 15 18:54 CTLFireability.txt
-rw-r--r-- 1 mcc users 13K May 15 18:54 CTLFireability.xml
-rw-r--r-- 1 mcc users 4.0K May 15 18:50 GenericPropertiesDefinition.xml
-rw-r--r-- 1 mcc users 6.3K May 15 18:50 GenericPropertiesVerdict.xml
-rw-r--r-- 1 mcc users 2.4K May 15 18:54 LTLCardinality.txt
-rw-r--r-- 1 mcc users 11K May 15 18:54 LTLCardinality.xml
-rw-r--r-- 1 mcc users 1.8K May 15 18:54 LTLFireability.txt
-rw-r--r-- 1 mcc users 7.4K May 15 18:54 LTLFireability.xml
-rw-r--r-- 1 mcc users 3.5K May 15 18:54 ReachabilityCardinality.txt
-rw-r--r-- 1 mcc users 18K May 15 18:54 ReachabilityCardinality.xml
-rw-r--r-- 1 mcc users 112 May 15 18:54 ReachabilityDeadlock.txt
-rw-r--r-- 1 mcc users 350 May 15 18:54 ReachabilityDeadlock.xml
-rw-r--r-- 1 mcc users 3.1K May 15 18:54 ReachabilityFireability.txt
-rw-r--r-- 1 mcc users 19K May 15 18:54 ReachabilityFireability.xml
-rw-r--r-- 1 mcc users 1.7K May 15 18:54 UpperBounds.txt
-rw-r--r-- 1 mcc users 3.7K May 15 18:54 UpperBounds.xml
-rw-r--r-- 1 mcc users 6 May 15 18:50 equiv_col
-rw-r--r-- 1 mcc users 9 May 15 18:50 instance
-rw-r--r-- 1 mcc users 6 May 15 18:50 iscolored
-rw-r--r-- 1 mcc users 81K May 15 18:50 model.pnml
=====================================================================
Generated by BenchKit 2-3637
Executing tool itstoolsl
Input is Solitaire-PT-FrnNC7x7, examination is ReachabilityDeadlock
Time confinement is 3600 seconds
Memory confinement is 16384 MBytes
Number of cores is 4
Run identifier is r165-smll-152705516200160
=====================================================================

--------------------
content from stdout:

=== Data for post analysis generated by BenchKit (invocation template)

The expected result is a vector of booleans
BOOL_VECTOR

here is the order used to build the result vector(from text file)
FORMULA_NAME Solitaire-PT-FrnNC7x7-ReachabilityDeadlock-0

=== Now, execution of the tool begins

BK_START 1527457871503

Flatten gal took : 131 ms
Applied a total of 0 rules in 10 ms. Remains 74 /74 variables (removed 0) and now considering 92/92 (removed 0) transitions.
// Phase 1: matrix 92 rows 74 cols
Using solver Z3 to compute partial order matrices.
Built C files in :
/home/mcc/execution
Converted graph to binary with : CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.louvain.binaries_1.0.0.201805241334/bin/convert-linux64, -i, /tmp/graph5499124222652869494.txt, -o, /tmp/graph5499124222652869494.bin, -w, /tmp/graph5499124222652869494.weights], workingDir=null]
Built communities with : CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.louvain.binaries_1.0.0.201805241334/bin/louvain-linux64, /tmp/graph5499124222652869494.bin, -l, -1, -v, -w, /tmp/graph5499124222652869494.weights, -q, 0, -e, 0.001], workingDir=null]
Presburger conditions satisfied. Using coverability to approximate state space in K-Induction.
// Phase 1: matrix 92 rows 74 cols
invariant :F25 + p25 = 1
invariant :F55 + T55 = 1
invariant :T42 + F42 = 1
invariant :F43 + T43 = 1
invariant :F32 + T32 = 1
invariant :T74 + F74 = 1
invariant :T56 + F56 = 1
invariant :F14 + T14 = 1
invariant :T47 + F47 = 1
invariant :T65 + F65 = 1
invariant :F26 + T26 = 1
invariant :T54 + F54 = 1
invariant :F23 + T23 = 1
invariant :F24 + T24 = 1
invariant :F44 + T44 = 1
invariant :T63 + F63 = 1
invariant :T75 + F75 = 1
invariant :T53 + F53 = 1
invariant :T13 + F13 = 1
invariant :T45 + F45 = 1
invariant :T51 + F51 = 1
invariant :F35 + T35 = 1
invariant :T31 + F31 = 1
invariant :T73 + F73 = 1
invariant :F41 + T41 = 1
invariant :F66 + T66 = 1
invariant :F57 + T57 = 1
invariant :T15 + F15 = 1
invariant :F64 + T64 = 1
invariant :T22 + F22 = 1
invariant :T36 + F36 = 1
invariant :T33 + F33 = 1
invariant :F37 + T37 = 1
invariant :F34 + T34 = 1
invariant :F46 + T46 = 1
invariant :T62 + F62 = 1
invariant :F52 + T52 = 1
Invoking ITS tools like this :CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.201805241334/bin/its-ctl-linux64, --gc-threshold, 2000000, --quiet, -i, /home/mcc/execution/ReachabilityDeadlock.pnml.gal, -t, CGAL, -ctl, DEADLOCK], workingDir=/home/mcc/execution]

its-ctl command run as :

/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.201805241334/bin/its-ctl-linux64 --gc-threshold 2000000 --quiet -i /home/mcc/execution/ReachabilityDeadlock.pnml.gal -t CGAL -ctl DEADLOCK
No direction supplied, using forward translation only.
built 14 ordering constraints for composite.
built 22 ordering constraints for composite.
built 28 ordering constraints for composite.
built 38 ordering constraints for composite.
built 38 ordering constraints for composite.
built 22 ordering constraints for composite.
Running compilation step : CommandLine [args=[gcc, -c, -I/home/mcc/BenchKit//lts_install_dir//include, -I., -std=c99, -fPIC, -O3, model.c], workingDir=/home/mcc/execution]
Compilation finished in 2409 ms.
Running link step : CommandLine [args=[gcc, -shared, -o, gal.so, model.o], workingDir=/home/mcc/execution]
Link finished in 41 ms.
Running LTSmin : CommandLine [args=[/home/mcc/BenchKit//lts_install_dir//bin/pins2lts-mc, ./gal.so, --threads=1, -p, --pins-guards, --when, -d], workingDir=/home/mcc/execution]
terminate called after throwing an instance of 'std::bad_alloc'
what(): std::bad_alloc
LTSmin run took 2292655 ms.
FORMULA Solitaire-PT-FrnNC7x7-ReachabilityDeadlock-0 TRUE TECHNIQUES PARTIAL_ORDER EXPLICIT LTSMIN SAT_SMT

BK_STOP 1527460174111

--------------------
content from stderr:

+ export BINDIR=/home/mcc/BenchKit/
+ BINDIR=/home/mcc/BenchKit/
++ pwd
+ export MODEL=/home/mcc/execution
+ MODEL=/home/mcc/execution
+ /home/mcc/BenchKit//runeclipse.sh /home/mcc/execution ReachabilityDeadlock -its -ltsminpath /home/mcc/BenchKit//lts_install_dir/ -louvain -smt
+ ulimit -s 65536
+ [[ -z '' ]]
+ export LTSMIN_MEM_SIZE=8589934592
+ LTSMIN_MEM_SIZE=8589934592
+ /home/mcc/BenchKit//itstools/its-tools -consoleLog -data /home/mcc/execution/workspace -pnfolder /home/mcc/execution -examination ReachabilityDeadlock -z3path /home/mcc/BenchKit//z3/bin/z3 -yices2path /home/mcc/BenchKit//yices/bin/yices -its -ltsminpath /home/mcc/BenchKit//lts_install_dir/ -louvain -smt -vmargs -Dosgi.locking=none -Declipse.stateSaveDelayInterval=-1 -Dosgi.configuration.area=/tmp/.eclipse -Xss8m -Xms40m -Xmx8192m -Dfile.encoding=UTF-8 -Dosgi.requiredJavaVersion=1.6
May 27, 2018 9:51:13 PM fr.lip6.move.gal.application.Application start
INFO: Running its-tools with arguments : [-pnfolder, /home/mcc/execution, -examination, ReachabilityDeadlock, -z3path, /home/mcc/BenchKit//z3/bin/z3, -yices2path, /home/mcc/BenchKit//yices/bin/yices, -its, -ltsminpath, /home/mcc/BenchKit//lts_install_dir/, -louvain, -smt]
May 27, 2018 9:51:13 PM fr.lip6.move.gal.application.MccTranslator transformPNML
INFO: Parsing pnml file : /home/mcc/execution/model.pnml
May 27, 2018 9:51:13 PM fr.lip6.move.gal.nupn.PTNetReader loadFromXML
INFO: Load time of PNML (sax parser for PT used): 110 ms
May 27, 2018 9:51:13 PM fr.lip6.move.gal.pnml.togal.PTGALTransformer handlePage
INFO: Transformed 74 places.
May 27, 2018 9:51:14 PM fr.lip6.move.gal.pnml.togal.PTGALTransformer handlePage
INFO: Transformed 92 transitions.
May 27, 2018 9:51:14 PM fr.lip6.move.serialization.SerializationUtil systemToFile
INFO: Time to serialize gal into /home/mcc/execution/model.pnml.img.gal : 23 ms
May 27, 2018 9:51:14 PM fr.lip6.move.gal.instantiate.GALRewriter flatten
INFO: Flatten gal took : 124 ms
May 27, 2018 9:51:14 PM fr.lip6.move.serialization.SerializationUtil systemToFile
INFO: Time to serialize gal into /home/mcc/execution/model.pnml.simple.gal : 14 ms
May 27, 2018 9:51:14 PM fr.lip6.move.gal.semantics.DeterministicNextBuilder getDeterministicNext
INFO: Input system was already deterministic with 92 transitions.
May 27, 2018 9:51:14 PM fr.lip6.move.gal.application.MccTranslator applyOrder
INFO: Applying decomposition
May 27, 2018 9:51:14 PM fr.lip6.move.gal.instantiate.GALRewriter flatten
INFO: Flatten gal took : 75 ms
May 27, 2018 9:51:14 PM fr.lip6.move.gal.semantics.DeterministicNextBuilder getDeterministicNext
INFO: Input system was already deterministic with 92 transitions.
May 27, 2018 9:51:14 PM fr.lip6.move.gal.instantiate.GALRewriter flatten
INFO: Flatten gal took : 47 ms
Begin: Sun May 27 21:51:15 2018

Computation of communities with the Newman-Girvan Modularity quality function

level 0:
start computation: Sun May 27 21:51:15 2018
network size: 74 nodes, 738 links, 184 weight
quality increased from -0.0161731 to 0.300987
end computation: Sun May 27 21:51:15 2018
level 1:
start computation: Sun May 27 21:51:15 2018
network size: 37 nodes, 249 links, 184 weight
quality increased from 0.300987 to 0.493174
end computation: Sun May 27 21:51:15 2018
level 2:
start computation: Sun May 27 21:51:15 2018
network size: 11 nodes, 69 links, 184 weight
quality increased from 0.493174 to 0.520899
end computation: Sun May 27 21:51:15 2018
level 3:
start computation: Sun May 27 21:51:15 2018
network size: 5 nodes, 23 links, 184 weight
quality increased from 0.520899 to 0.520899
end computation: Sun May 27 21:51:15 2018
End: Sun May 27 21:51:15 2018
Total duration: 0 sec
0.520899
May 27, 2018 9:51:15 PM fr.lip6.move.gal.gal2smt.bmc.KInductionSolver computeAndDeclareInvariants
INFO: Computed 37 place invariants in 16 ms
May 27, 2018 9:51:15 PM fr.lip6.move.gal.instantiate.CompositeBuilder decomposeWithOrder
INFO: Decomposing Gal with order
May 27, 2018 9:51:15 PM fr.lip6.move.gal.instantiate.GALRewriter flatten
INFO: Flatten gal took : 40 ms
May 27, 2018 9:51:15 PM fr.lip6.move.gal.instantiate.CompositeBuilder rewriteArraysToAllowPartition
INFO: Rewriting arrays to variables to allow decomposition.
May 27, 2018 9:51:15 PM fr.lip6.move.gal.instantiate.Instantiator fuseIsomorphicEffects
INFO: Removed a total of 202 redundant transitions.
May 27, 2018 9:51:15 PM fr.lip6.move.serialization.SerializationUtil systemToFile
INFO: Time to serialize gal into /home/mcc/execution/ReachabilityDeadlock.pnml.gal : 7 ms
May 27, 2018 9:51:15 PM fr.lip6.move.gal.gal2smt.bmc.KInductionSolver init
INFO: Proved 74 variables to be positive in 538 ms
May 27, 2018 9:51:15 PM fr.lip6.move.gal.gal2smt.bmc.NecessaryEnablingsolver computeAblingMatrix
INFO: Computing symmetric may disable matrix : 92 transitions.
May 27, 2018 9:51:15 PM fr.lip6.move.gal.gal2smt.bmc.NecessaryEnablingsolver printStats
INFO: Computation of disable matrix completed :0/92 took 0 ms. Total solver calls (SAT/UNSAT): 0(0/0)
May 27, 2018 9:51:15 PM fr.lip6.move.gal.gal2smt.bmc.NecessaryEnablingsolver printStats
INFO: Computation of Complete disable matrix. took 7 ms. Total solver calls (SAT/UNSAT): 0(0/0)
May 27, 2018 9:51:15 PM fr.lip6.move.gal.gal2smt.bmc.NecessaryEnablingsolver computeAblingMatrix
INFO: Computing symmetric may enable matrix : 92 transitions.
May 27, 2018 9:51:15 PM fr.lip6.move.gal.gal2smt.bmc.NecessaryEnablingsolver printStats
INFO: Computation of Complete enable matrix. took 7 ms. Total solver calls (SAT/UNSAT): 0(0/0)
May 27, 2018 9:51:15 PM fr.lip6.move.gal.gal2smt.bmc.NecessaryEnablingsolver computeCoEnablingMatrix
INFO: Computing symmetric co enabling matrix : 92 transitions.
May 27, 2018 9:51:17 PM fr.lip6.move.gal.gal2smt.bmc.NecessaryEnablingsolver printStats
INFO: Computation of Finished co-enabling matrix. took 1972 ms. Total solver calls (SAT/UNSAT): 874(424/450)
May 27, 2018 9:51:17 PM fr.lip6.move.gal.gal2smt.bmc.NecessaryEnablingsolver computeDoNotAccord
INFO: Computing Do-Not-Accords matrix : 92 transitions.
May 27, 2018 9:51:17 PM fr.lip6.move.gal.gal2smt.bmc.NecessaryEnablingsolver printStats
INFO: Computation of Completed DNA matrix. took 4 ms. Total solver calls (SAT/UNSAT): 0(0/0)
May 27, 2018 9:51:17 PM fr.lip6.move.gal.gal2pins.Gal2PinsTransformerNext transform
INFO: Built C files in 2771ms conformant to PINS in folder :/home/mcc/execution
ITS-tools command line returned an error code 134

Sequence of Actions to be Executed by the VM

This is useful if one wants to reexecute the tool in the VM from the submitted image disk.

set -x
# this is for BenchKit: configuration of major elements for the test
export BK_INPUT="Solitaire-PT-FrnNC7x7"
export BK_EXAMINATION="ReachabilityDeadlock"
export BK_TOOL="itstoolsl"
export BK_RESULT_DIR="/tmp/BK_RESULTS/OUTPUTS"
export BK_TIME_CONFINEMENT="3600"
export BK_MEMORY_CONFINEMENT="16384"

# this is specific to your benchmark or test

export BIN_DIR="$HOME/BenchKit/bin"

# remove the execution directoty if it exists (to avoid increse of .vmdk images)
if [ -d execution ] ; then
rm -rf execution
fi

tar xzf /home/mcc/BenchKit/INPUTS/Solitaire-PT-FrnNC7x7.tgz
mv Solitaire-PT-FrnNC7x7 execution
cd execution
pwd
ls -lh

# this is for BenchKit: explicit launching of the test
echo "====================================================================="
echo " Generated by BenchKit 2-3637"
echo " Executing tool itstoolsl"
echo " Input is Solitaire-PT-FrnNC7x7, examination is ReachabilityDeadlock"
echo " Time confinement is $BK_TIME_CONFINEMENT seconds"
echo " Memory confinement is 16384 MBytes"
echo " Number of cores is 4"
echo " Run identifier is r165-smll-152705516200160"
echo "====================================================================="
echo
echo "--------------------"
echo "content from stdout:"
echo
echo "=== Data for post analysis generated by BenchKit (invocation template)"
echo
if [ "ReachabilityDeadlock" = "UpperBounds" ] ; then
echo "The expected result is a vector of positive values"
echo NUM_VECTOR
elif [ "ReachabilityDeadlock" != "StateSpace" ] ; then
echo "The expected result is a vector of booleans"
echo BOOL_VECTOR
else
echo "no data necessary for post analysis"
fi
echo
if [ -f "ReachabilityDeadlock.txt" ] ; then
echo "here is the order used to build the result vector(from text file)"
for x in $(grep Property ReachabilityDeadlock.txt | cut -d ' ' -f 2 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ -f "ReachabilityDeadlock.xml" ] ; then # for cunf (txt files deleted;-)
echo echo "here is the order used to build the result vector(from xml file)"
for x in $(grep '' ReachabilityDeadlock.xml | cut -d '>' -f 2 | cut -d '<' -f 1 | sort -u) ; do
echo "FORMULA_NAME $x"
done
fi
echo
echo "=== Now, execution of the tool begins"
echo
echo -n "BK_START "
date -u +%s%3N
echo
timeout -s 9 $BK_TIME_CONFINEMENT bash -c "/home/mcc/BenchKit/BenchKit_head.sh 2> STDERR ; echo ; echo -n \"BK_STOP \" ; date -u +%s%3N"
if [ $? -eq 137 ] ; then
echo
echo "BK_TIME_CONFINEMENT_REACHED"
fi
echo
echo "--------------------"
echo "content from stderr:"
echo
cat STDERR ;