Execution Chart

We display below the execution chart for this examination (boot time has been removed).

Trace from the execution

Waiting for the VM to be ready (probing ssh)
.........................
/home/mcc/execution
total 264K
-rw-r--r-- 1 mcc users 3.4K May 15 18:54 CTLCardinality.txt
-rw-r--r-- 1 mcc users 19K May 15 18:54 CTLCardinality.xml
-rw-r--r-- 1 mcc users 2.7K May 15 18:54 CTLFireability.txt
-rw-r--r-- 1 mcc users 17K May 15 18:54 CTLFireability.xml
-rw-r--r-- 1 mcc users 4.0K May 15 18:50 GenericPropertiesDefinition.xml
-rw-r--r-- 1 mcc users 6.3K May 15 18:50 GenericPropertiesVerdict.xml
-rw-r--r-- 1 mcc users 2.4K May 15 18:54 LTLCardinality.txt
-rw-r--r-- 1 mcc users 11K May 15 18:54 LTLCardinality.xml
-rw-r--r-- 1 mcc users 1.9K May 15 18:54 LTLFireability.txt
-rw-r--r-- 1 mcc users 8.8K May 15 18:54 LTLFireability.xml
-rw-r--r-- 1 mcc users 3.7K May 15 18:54 ReachabilityCardinality.txt
-rw-r--r-- 1 mcc users 19K May 15 18:54 ReachabilityCardinality.xml
-rw-r--r-- 1 mcc users 112 May 15 18:54 ReachabilityDeadlock.txt
-rw-r--r-- 1 mcc users 350 May 15 18:54 ReachabilityDeadlock.xml
-rw-r--r-- 1 mcc users 3.4K May 15 18:54 ReachabilityFireability.txt
-rw-r--r-- 1 mcc users 22K May 15 18:54 ReachabilityFireability.xml
-rw-r--r-- 1 mcc users 1.7K May 15 18:54 UpperBounds.txt
-rw-r--r-- 1 mcc users 3.7K May 15 18:54 UpperBounds.xml
-rw-r--r-- 1 mcc users 6 May 15 18:50 equiv_col
-rw-r--r-- 1 mcc users 9 May 15 18:50 instance
-rw-r--r-- 1 mcc users 6 May 15 18:50 iscolored
-rw-r--r-- 1 mcc users 92K May 15 18:50 model.pnml
=====================================================================
Generated by BenchKit 2-3637
Executing tool itstoolsl
Input is Solitaire-PT-FrnCT7x7, examination is ReachabilityDeadlock
Time confinement is 3600 seconds
Memory confinement is 16384 MBytes
Number of cores is 4
Run identifier is r165-smll-152705516200153
=====================================================================

--------------------
content from stdout:

=== Data for post analysis generated by BenchKit (invocation template)

The expected result is a vector of booleans
BOOL_VECTOR

here is the order used to build the result vector(from text file)
FORMULA_NAME Solitaire-PT-FrnCT7x7-ReachabilityDeadlock-0

=== Now, execution of the tool begins

BK_START 1527453181647

Flatten gal took : 105 ms
Applied a total of 0 rules in 11 ms. Remains 75 /75 variables (removed 0) and now considering 92/92 (removed 0) transitions.
// Phase 1: matrix 92 rows 75 cols
Using solver Z3 to compute partial order matrices.
Built C files in :
/home/mcc/execution
Converted graph to binary with : CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.louvain.binaries_1.0.0.201805241334/bin/convert-linux64, -i, /tmp/graph7206355229725352781.txt, -o, /tmp/graph7206355229725352781.bin, -w, /tmp/graph7206355229725352781.weights], workingDir=null]
Built communities with : CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.louvain.binaries_1.0.0.201805241334/bin/louvain-linux64, /tmp/graph7206355229725352781.bin, -l, -1, -v, -w, /tmp/graph7206355229725352781.weights, -q, 0, -e, 0.001], workingDir=null]
Presburger conditions satisfied. Using coverability to approximate state space in K-Induction.
// Phase 1: matrix 92 rows 75 cols
invariant :T15 + F15 = 1
invariant :T47 + F47 = 1
invariant :F41 + T41 = 1
invariant :T75 + F75 = 1
invariant :F52 + T52 = 1
invariant :T31 + F31 = 1
invariant :T56 + F56 = 1
invariant :T73 + F73 = 1
invariant :F34 + T34 = 1
invariant :F66 + T66 = 1
invariant :T13 + F13 = 1
invariant :T42 + F42 = 1
invariant :T54 + F54 = 1
invariant :F31 + F51 + F42 + F53 + F62 + -1'T52 + -1'T43 + -1'T32 + -1'T41 + F22 + F33 + -1'T34 + -1'p25 + -1'T14 + -1'T23 + F13 + F15 + -1'T44 + -1'T35 + -1'T24 + F45 + F54 + F73 + F75 + -1'T64 + -1'T55 + F63 + F65 + F74 + -1'T46 + -1'T37 + -1'T26 + F36 + F47 + F56 + -1'T66 + -1'T57 + counter = 20
invariant :F57 + T57 = 1
invariant :F32 + T32 = 1
invariant :T62 + F62 = 1
invariant :F23 + T23 = 1
invariant :T33 + F33 = 1
invariant :F24 + T24 = 1
invariant :T51 + F51 = 1
invariant :-1'F31 + -1'F51 + -1'F42 + -1'F53 + -1'F62 + T52 + T43 + T32 + T41 + -1'F22 + -1'F33 + T34 + p25 + T14 + T23 + -1'F13 + -1'F15 + T44 + T35 + T24 + T45 + -1'F54 + -1'F73 + -1'F75 + T64 + T55 + -1'F63 + -1'F65 + -1'F74 + T46 + T37 + T26 + -1'F36 + -1'F47 + -1'F56 + T66 + T57 + -1'counter = -19
invariant :F14 + T14 = 1
invariant :F35 + T35 = 1
invariant :F43 + T43 = 1
invariant :T22 + F22 = 1
invariant :T53 + F53 = 1
invariant :F44 + T44 = 1
invariant :T74 + F74 = 1
invariant :F46 + T46 = 1
invariant :T65 + F65 = 1
invariant :F37 + T37 = 1
invariant :T63 + F63 = 1
invariant :F25 + p25 = 1
invariant :F26 + T26 = 1
invariant :F55 + T55 = 1
invariant :T36 + F36 = 1
invariant :F64 + T64 = 1
Invoking ITS tools like this :CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.201805241334/bin/its-ctl-linux64, --gc-threshold, 2000000, --quiet, -i, /home/mcc/execution/ReachabilityDeadlock.pnml.gal, -t, CGAL, -ctl, DEADLOCK], workingDir=/home/mcc/execution]

its-ctl command run as :

/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.201805241334/bin/its-ctl-linux64 --gc-threshold 2000000 --quiet -i /home/mcc/execution/ReachabilityDeadlock.pnml.gal -t CGAL -ctl DEADLOCK
No direction supplied, using forward translation only.
built 15 ordering constraints for composite.
built 22 ordering constraints for composite.
built 24 ordering constraints for composite.
built 26 ordering constraints for composite.
built 92 ordering constraints for composite.
built 8 ordering constraints for composite.
built 24 ordering constraints for composite.
built 22 ordering constraints for composite.
Running compilation step : CommandLine [args=[gcc, -c, -I/home/mcc/BenchKit//lts_install_dir//include, -I., -std=c99, -fPIC, -O3, model.c], workingDir=/home/mcc/execution]
Compilation finished in 2731 ms.
Running link step : CommandLine [args=[gcc, -shared, -o, gal.so, model.o], workingDir=/home/mcc/execution]
Link finished in 45 ms.
Running LTSmin : CommandLine [args=[/home/mcc/BenchKit//lts_install_dir//bin/pins2lts-mc, ./gal.so, --threads=1, -p, --pins-guards, --when, -d], workingDir=/home/mcc/execution]
terminate called after throwing an instance of 'std::bad_alloc'
what(): std::bad_alloc

BK_TIME_CONFINEMENT_REACHED

--------------------
content from stderr:

+ export BINDIR=/home/mcc/BenchKit/
+ BINDIR=/home/mcc/BenchKit/
++ pwd
+ export MODEL=/home/mcc/execution
+ MODEL=/home/mcc/execution
+ /home/mcc/BenchKit//runeclipse.sh /home/mcc/execution ReachabilityDeadlock -its -ltsminpath /home/mcc/BenchKit//lts_install_dir/ -louvain -smt
+ ulimit -s 65536
+ [[ -z '' ]]
+ export LTSMIN_MEM_SIZE=8589934592
+ LTSMIN_MEM_SIZE=8589934592
+ /home/mcc/BenchKit//itstools/its-tools -consoleLog -data /home/mcc/execution/workspace -pnfolder /home/mcc/execution -examination ReachabilityDeadlock -z3path /home/mcc/BenchKit//z3/bin/z3 -yices2path /home/mcc/BenchKit//yices/bin/yices -its -ltsminpath /home/mcc/BenchKit//lts_install_dir/ -louvain -smt -vmargs -Dosgi.locking=none -Declipse.stateSaveDelayInterval=-1 -Dosgi.configuration.area=/tmp/.eclipse -Xss8m -Xms40m -Xmx8192m -Dfile.encoding=UTF-8 -Dosgi.requiredJavaVersion=1.6
May 27, 2018 8:33:03 PM fr.lip6.move.gal.application.Application start
INFO: Running its-tools with arguments : [-pnfolder, /home/mcc/execution, -examination, ReachabilityDeadlock, -z3path, /home/mcc/BenchKit//z3/bin/z3, -yices2path, /home/mcc/BenchKit//yices/bin/yices, -its, -ltsminpath, /home/mcc/BenchKit//lts_install_dir/, -louvain, -smt]
May 27, 2018 8:33:03 PM fr.lip6.move.gal.application.MccTranslator transformPNML
INFO: Parsing pnml file : /home/mcc/execution/model.pnml
May 27, 2018 8:33:04 PM fr.lip6.move.gal.nupn.PTNetReader loadFromXML
INFO: Load time of PNML (sax parser for PT used): 86 ms
May 27, 2018 8:33:04 PM fr.lip6.move.gal.pnml.togal.PTGALTransformer handlePage
INFO: Transformed 75 places.
May 27, 2018 8:33:04 PM fr.lip6.move.gal.pnml.togal.PTGALTransformer handlePage
INFO: Transformed 92 transitions.
May 27, 2018 8:33:04 PM fr.lip6.move.serialization.SerializationUtil systemToFile
INFO: Time to serialize gal into /home/mcc/execution/model.pnml.img.gal : 16 ms
May 27, 2018 8:33:04 PM fr.lip6.move.gal.instantiate.GALRewriter flatten
INFO: Flatten gal took : 100 ms
May 27, 2018 8:33:04 PM fr.lip6.move.serialization.SerializationUtil systemToFile
INFO: Time to serialize gal into /home/mcc/execution/model.pnml.simple.gal : 6 ms
May 27, 2018 8:33:04 PM fr.lip6.move.gal.semantics.DeterministicNextBuilder getDeterministicNext
INFO: Input system was already deterministic with 92 transitions.
May 27, 2018 8:33:04 PM fr.lip6.move.gal.application.MccTranslator applyOrder
INFO: Applying decomposition
May 27, 2018 8:33:04 PM fr.lip6.move.gal.instantiate.GALRewriter flatten
INFO: Flatten gal took : 50 ms
May 27, 2018 8:33:05 PM fr.lip6.move.gal.instantiate.GALRewriter flatten
INFO: Flatten gal took : 61 ms
May 27, 2018 8:33:05 PM fr.lip6.move.gal.semantics.DeterministicNextBuilder getDeterministicNext
INFO: Input system was already deterministic with 92 transitions.
Begin: Sun May 27 20:33:05 2018

Computation of communities with the Newman-Girvan Modularity quality function

level 0:
start computation: Sun May 27 20:33:05 2018
network size: 75 nodes, 886 links, 184 weight
quality increased from -0.0280436 to 0.210969
end computation: Sun May 27 20:33:05 2018
level 1:
start computation: Sun May 27 20:33:05 2018
network size: 37 nodes, 305 links, 184 weight
quality increased from 0.210969 to 0.356999
end computation: Sun May 27 20:33:05 2018
level 2:
start computation: Sun May 27 20:33:05 2018
network size: 11 nodes, 71 links, 184 weight
quality increased from 0.356999 to 0.371462
end computation: Sun May 27 20:33:05 2018
level 3:
start computation: Sun May 27 20:33:05 2018
network size: 7 nodes, 39 links, 184 weight
quality increased from 0.371462 to 0.371462
end computation: Sun May 27 20:33:05 2018
End: Sun May 27 20:33:05 2018
Total duration: 0 sec
0.371462
May 27, 2018 8:33:05 PM fr.lip6.move.gal.instantiate.CompositeBuilder decomposeWithOrder
INFO: Decomposing Gal with order
May 27, 2018 8:33:05 PM fr.lip6.move.gal.instantiate.GALRewriter flatten
INFO: Flatten gal took : 32 ms
May 27, 2018 8:33:05 PM fr.lip6.move.gal.instantiate.CompositeBuilder rewriteArraysToAllowPartition
INFO: Rewriting arrays to variables to allow decomposition.
May 27, 2018 8:33:05 PM fr.lip6.move.gal.gal2smt.bmc.KInductionSolver computeAndDeclareInvariants
INFO: Computed 38 place invariants in 37 ms
May 27, 2018 8:33:05 PM fr.lip6.move.gal.instantiate.Instantiator fuseIsomorphicEffects
INFO: Removed a total of 281 redundant transitions.
May 27, 2018 8:33:05 PM fr.lip6.move.serialization.SerializationUtil systemToFile
INFO: Time to serialize gal into /home/mcc/execution/ReachabilityDeadlock.pnml.gal : 9 ms
May 27, 2018 8:33:05 PM fr.lip6.move.gal.gal2smt.bmc.KInductionSolver init
INFO: Proved 75 variables to be positive in 599 ms
May 27, 2018 8:33:05 PM fr.lip6.move.gal.gal2smt.bmc.NecessaryEnablingsolver computeAblingMatrix
INFO: Computing symmetric may disable matrix : 92 transitions.
May 27, 2018 8:33:05 PM fr.lip6.move.gal.gal2smt.bmc.NecessaryEnablingsolver printStats
INFO: Computation of disable matrix completed :0/92 took 0 ms. Total solver calls (SAT/UNSAT): 0(0/0)
May 27, 2018 8:33:05 PM fr.lip6.move.gal.gal2smt.bmc.NecessaryEnablingsolver printStats
INFO: Computation of Complete disable matrix. took 10 ms. Total solver calls (SAT/UNSAT): 0(0/0)
May 27, 2018 8:33:05 PM fr.lip6.move.gal.gal2smt.bmc.NecessaryEnablingsolver computeAblingMatrix
INFO: Computing symmetric may enable matrix : 92 transitions.
May 27, 2018 8:33:05 PM fr.lip6.move.gal.gal2smt.bmc.NecessaryEnablingsolver printStats
INFO: Computation of Complete enable matrix. took 9 ms. Total solver calls (SAT/UNSAT): 0(0/0)
May 27, 2018 8:33:05 PM fr.lip6.move.gal.gal2smt.bmc.NecessaryEnablingsolver computeCoEnablingMatrix
INFO: Computing symmetric co enabling matrix : 92 transitions.
May 27, 2018 8:33:08 PM fr.lip6.move.gal.gal2smt.bmc.NecessaryEnablingsolver printStats
INFO: Computation of co-enabling matrix(14/92) took 3034 ms. Total solver calls (SAT/UNSAT): 1260(1171/89)
May 27, 2018 8:33:11 PM fr.lip6.move.gal.gal2smt.bmc.NecessaryEnablingsolver printStats
INFO: Computation of co-enabling matrix(41/92) took 6062 ms. Total solver calls (SAT/UNSAT): 2961(2670/291)
May 27, 2018 8:33:14 PM fr.lip6.move.gal.gal2smt.bmc.NecessaryEnablingsolver printStats
INFO: Computation of Finished co-enabling matrix. took 8563 ms. Total solver calls (SAT/UNSAT): 4186(3736/450)
May 27, 2018 8:33:14 PM fr.lip6.move.gal.gal2smt.bmc.NecessaryEnablingsolver computeDoNotAccord
INFO: Computing Do-Not-Accords matrix : 92 transitions.
May 27, 2018 8:33:14 PM fr.lip6.move.gal.gal2smt.bmc.NecessaryEnablingsolver printStats
INFO: Computation of Completed DNA matrix. took 4 ms. Total solver calls (SAT/UNSAT): 0(0/0)
May 27, 2018 8:33:14 PM fr.lip6.move.gal.gal2pins.Gal2PinsTransformerNext transform
INFO: Built C files in 9550ms conformant to PINS in folder :/home/mcc/execution
ITS-tools command line returned an error code 134

Sequence of Actions to be Executed by the VM

This is useful if one wants to reexecute the tool in the VM from the submitted image disk.

set -x
# this is for BenchKit: configuration of major elements for the test
export BK_INPUT="Solitaire-PT-FrnCT7x7"
export BK_EXAMINATION="ReachabilityDeadlock"
export BK_TOOL="itstoolsl"
export BK_RESULT_DIR="/tmp/BK_RESULTS/OUTPUTS"
export BK_TIME_CONFINEMENT="3600"
export BK_MEMORY_CONFINEMENT="16384"

# this is specific to your benchmark or test

export BIN_DIR="$HOME/BenchKit/bin"

# remove the execution directoty if it exists (to avoid increse of .vmdk images)
if [ -d execution ] ; then
rm -rf execution
fi

tar xzf /home/mcc/BenchKit/INPUTS/Solitaire-PT-FrnCT7x7.tgz
mv Solitaire-PT-FrnCT7x7 execution
cd execution
pwd
ls -lh

# this is for BenchKit: explicit launching of the test
echo "====================================================================="
echo " Generated by BenchKit 2-3637"
echo " Executing tool itstoolsl"
echo " Input is Solitaire-PT-FrnCT7x7, examination is ReachabilityDeadlock"
echo " Time confinement is $BK_TIME_CONFINEMENT seconds"
echo " Memory confinement is 16384 MBytes"
echo " Number of cores is 4"
echo " Run identifier is r165-smll-152705516200153"
echo "====================================================================="
echo
echo "--------------------"
echo "content from stdout:"
echo
echo "=== Data for post analysis generated by BenchKit (invocation template)"
echo
if [ "ReachabilityDeadlock" = "UpperBounds" ] ; then
echo "The expected result is a vector of positive values"
echo NUM_VECTOR
elif [ "ReachabilityDeadlock" != "StateSpace" ] ; then
echo "The expected result is a vector of booleans"
echo BOOL_VECTOR
else
echo "no data necessary for post analysis"
fi
echo
if [ -f "ReachabilityDeadlock.txt" ] ; then
echo "here is the order used to build the result vector(from text file)"
for x in $(grep Property ReachabilityDeadlock.txt | cut -d ' ' -f 2 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ -f "ReachabilityDeadlock.xml" ] ; then # for cunf (txt files deleted;-)
echo echo "here is the order used to build the result vector(from xml file)"
for x in $(grep '' ReachabilityDeadlock.xml | cut -d '>' -f 2 | cut -d '<' -f 1 | sort -u) ; do
echo "FORMULA_NAME $x"
done
fi
echo
echo "=== Now, execution of the tool begins"
echo
echo -n "BK_START "
date -u +%s%3N
echo
timeout -s 9 $BK_TIME_CONFINEMENT bash -c "/home/mcc/BenchKit/BenchKit_head.sh 2> STDERR ; echo ; echo -n \"BK_STOP \" ; date -u +%s%3N"
if [ $? -eq 137 ] ; then
echo
echo "BK_TIME_CONFINEMENT_REACHED"
fi
echo
echo "--------------------"
echo "content from stderr:"
echo
cat STDERR ;