Execution Chart

We display below the execution chart for this examination (boot time has been removed).

Trace from the execution

Waiting for the VM to be ready (probing ssh)
.................................................................................................................................
/home/mcc/execution
total 1.2M
-rw-r--r-- 1 mcc users 27K May 15 18:54 CTLCardinality.txt
-rw-r--r-- 1 mcc users 110K May 15 18:54 CTLCardinality.xml
-rw-r--r-- 1 mcc users 5.7K May 15 18:54 CTLFireability.txt
-rw-r--r-- 1 mcc users 26K May 15 18:54 CTLFireability.xml
-rw-r--r-- 1 mcc users 4.0K May 15 18:50 GenericPropertiesDefinition.xml
-rw-r--r-- 1 mcc users 6.4K May 15 18:50 GenericPropertiesVerdict.xml
-rw-r--r-- 1 mcc users 13K May 26 09:27 LTLCardinality.txt
-rw-r--r-- 1 mcc users 49K May 26 09:27 LTLCardinality.xml
-rw-r--r-- 1 mcc users 4.0K May 26 09:27 LTLFireability.txt
-rw-r--r-- 1 mcc users 17K May 26 09:27 LTLFireability.xml
-rw-r--r-- 1 mcc users 27K May 15 18:54 ReachabilityCardinality.txt
-rw-r--r-- 1 mcc users 107K May 15 18:54 ReachabilityCardinality.xml
-rw-r--r-- 1 mcc users 116 May 15 18:54 ReachabilityDeadlock.txt
-rw-r--r-- 1 mcc users 354 May 15 18:54 ReachabilityDeadlock.xml
-rw-r--r-- 1 mcc users 6.7K May 15 18:54 ReachabilityFireability.txt
-rw-r--r-- 1 mcc users 30K May 15 18:54 ReachabilityFireability.xml
-rw-r--r-- 1 mcc users 6.2K May 15 18:54 UpperBounds.txt
-rw-r--r-- 1 mcc users 17K May 15 18:54 UpperBounds.xml
-rw-r--r-- 1 mcc users 5 May 15 18:50 equiv_col
-rw-r--r-- 1 mcc users 3 May 15 18:50 instance
-rw-r--r-- 1 mcc users 6 May 15 18:50 iscolored
-rw-r--r-- 1 mcc users 686K May 15 18:50 model.pnml
=====================================================================
Generated by BenchKit 2-3637
Executing tool itstoolsl
Input is QuasiCertifProtocol-PT-18, examination is CTLFireability
Time confinement is 3600 seconds
Memory confinement is 16384 MBytes
Number of cores is 4
Run identifier is r141-qhx2-152673582600081
=====================================================================

--------------------
content from stdout:

=== Data for post analysis generated by BenchKit (invocation template)

The expected result is a vector of booleans
BOOL_VECTOR

here is the order used to build the result vector(from text file)
FORMULA_NAME QuasiCertifProtocol-PT-18-CTLFireability-00
FORMULA_NAME QuasiCertifProtocol-PT-18-CTLFireability-01
FORMULA_NAME QuasiCertifProtocol-PT-18-CTLFireability-02
FORMULA_NAME QuasiCertifProtocol-PT-18-CTLFireability-03
FORMULA_NAME QuasiCertifProtocol-PT-18-CTLFireability-04
FORMULA_NAME QuasiCertifProtocol-PT-18-CTLFireability-05
FORMULA_NAME QuasiCertifProtocol-PT-18-CTLFireability-06
FORMULA_NAME QuasiCertifProtocol-PT-18-CTLFireability-07
FORMULA_NAME QuasiCertifProtocol-PT-18-CTLFireability-08
FORMULA_NAME QuasiCertifProtocol-PT-18-CTLFireability-09
FORMULA_NAME QuasiCertifProtocol-PT-18-CTLFireability-10
FORMULA_NAME QuasiCertifProtocol-PT-18-CTLFireability-11
FORMULA_NAME QuasiCertifProtocol-PT-18-CTLFireability-12
FORMULA_NAME QuasiCertifProtocol-PT-18-CTLFireability-13
FORMULA_NAME QuasiCertifProtocol-PT-18-CTLFireability-14
FORMULA_NAME QuasiCertifProtocol-PT-18-CTLFireability-15

=== Now, execution of the tool begins

BK_START 1527899132956

Converted graph to binary with : CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.louvain.binaries_1.0.0.201805241334/bin/convert-linux64, -i, /tmp/graph8403395841175325110.txt, -o, /tmp/graph8403395841175325110.bin, -w, /tmp/graph8403395841175325110.weights], workingDir=null]
Built communities with : CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.louvain.binaries_1.0.0.201805241334/bin/louvain-linux64, /tmp/graph8403395841175325110.bin, -l, -1, -v, -w, /tmp/graph8403395841175325110.weights, -q, 0, -e, 0.001], workingDir=null]
Invoking ITS tools like this :CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.201805241334/bin/its-ctl-linux64, --gc-threshold, 2000000, --quiet, -i, /home/mcc/execution/CTLFireability.pnml.gal, -t, CGAL, -ctl, /home/mcc/execution/CTLFireability.ctl], workingDir=/home/mcc/execution]

its-ctl command run as :

/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.201805241334/bin/its-ctl-linux64 --gc-threshold 2000000 --quiet -i /home/mcc/execution/CTLFireability.pnml.gal -t CGAL -ctl /home/mcc/execution/CTLFireability.ctl
No direction supplied, using forward translation only.
Parsed 16 CTL formulae.
built 42 ordering constraints for composite.
built 32 ordering constraints for composite.
built 32 ordering constraints for composite.
built 33 ordering constraints for composite.
built 32 ordering constraints for composite.
built 33 ordering constraints for composite.
built 33 ordering constraints for composite.
built 32 ordering constraints for composite.
built 33 ordering constraints for composite.
built 32 ordering constraints for composite.
built 32 ordering constraints for composite.
built 32 ordering constraints for composite.
built 33 ordering constraints for composite.
built 95 ordering constraints for composite.
built 33 ordering constraints for composite.
built 33 ordering constraints for composite.
built 31 ordering constraints for composite.
built 32 ordering constraints for composite.
built 32 ordering constraints for composite.
built 32 ordering constraints for composite.
built 32 ordering constraints for composite.
sparsehash FATAL ERROR: failed to allocate 38 groups

BK_STOP 1527900758854

--------------------
content from stderr:

+ export BINDIR=/home/mcc/BenchKit/
+ BINDIR=/home/mcc/BenchKit/
++ pwd
+ export MODEL=/home/mcc/execution
+ MODEL=/home/mcc/execution
+ /home/mcc/BenchKit//runeclipse.sh /home/mcc/execution CTLFireability -its -ltsminpath /home/mcc/BenchKit//lts_install_dir/ -louvain -smt
+ ulimit -s 65536
+ [[ -z '' ]]
+ export LTSMIN_MEM_SIZE=8589934592
+ LTSMIN_MEM_SIZE=8589934592
+ /home/mcc/BenchKit//itstools/its-tools -consoleLog -data /home/mcc/execution/workspace -pnfolder /home/mcc/execution -examination CTLFireability -z3path /home/mcc/BenchKit//z3/bin/z3 -yices2path /home/mcc/BenchKit//yices/bin/yices -its -ltsminpath /home/mcc/BenchKit//lts_install_dir/ -louvain -smt -vmargs -Dosgi.locking=none -Declipse.stateSaveDelayInterval=-1 -Dosgi.configuration.area=/tmp/.eclipse -Xss8m -Xms40m -Xmx8192m -Dfile.encoding=UTF-8 -Dosgi.requiredJavaVersion=1.6
Jun 02, 2018 12:25:38 AM fr.lip6.move.gal.application.Application start
INFO: Running its-tools with arguments : [-pnfolder, /home/mcc/execution, -examination, CTLFireability, -z3path, /home/mcc/BenchKit//z3/bin/z3, -yices2path, /home/mcc/BenchKit//yices/bin/yices, -its, -ltsminpath, /home/mcc/BenchKit//lts_install_dir/, -louvain, -smt]
Jun 02, 2018 12:25:38 AM fr.lip6.move.gal.application.MccTranslator transformPNML
INFO: Parsing pnml file : /home/mcc/execution/model.pnml
Jun 02, 2018 12:25:38 AM fr.lip6.move.gal.nupn.PTNetReader loadFromXML
INFO: Load time of PNML (sax parser for PT used): 285 ms
Jun 02, 2018 12:25:38 AM fr.lip6.move.gal.pnml.togal.PTGALTransformer handlePage
INFO: Transformed 1398 places.
Jun 02, 2018 12:25:39 AM fr.lip6.move.gal.pnml.togal.PTGALTransformer handlePage
INFO: Transformed 296 transitions.
Jun 02, 2018 12:25:39 AM fr.lip6.move.serialization.SerializationUtil systemToFile
INFO: Time to serialize gal into /home/mcc/execution/model.pnml.img.gal : 66 ms
Jun 02, 2018 12:25:39 AM fr.lip6.move.gal.application.MccTranslator applyOrder
INFO: Applying decomposition
Jun 02, 2018 12:25:40 AM fr.lip6.move.gal.instantiate.GALRewriter flatten
INFO: Flatten gal took : 446 ms
Jun 02, 2018 12:25:40 AM fr.lip6.move.gal.instantiate.GALRewriter flatten
INFO: Flatten gal took : 198 ms
Begin: Sat Jun 2 00:25:41 2018

Computation of communities with the Newman-Girvan Modularity quality function

level 0:
start computation: Sat Jun 2 00:25:41 2018
network size: 1398 nodes, 19216 links, 592 weight
quality increased from -0.051946 to 0.452537
end computation: Sat Jun 2 00:25:41 2018
level 1:
start computation: Sat Jun 2 00:25:41 2018
network size: 120 nodes, 2447 links, 592 weight
quality increased from 0.452537 to 0.516399
end computation: Sat Jun 2 00:25:41 2018
level 2:
start computation: Sat Jun 2 00:25:41 2018
network size: 53 nodes, 1347 links, 592 weight
quality increased from 0.516399 to 0.544422
end computation: Sat Jun 2 00:25:41 2018
level 3:
start computation: Sat Jun 2 00:25:41 2018
network size: 21 nodes, 169 links, 592 weight
quality increased from 0.544422 to 0.544422
end computation: Sat Jun 2 00:25:41 2018
End: Sat Jun 2 00:25:41 2018
Total duration: 0 sec
0.544422
Jun 02, 2018 12:25:41 AM fr.lip6.move.gal.instantiate.CompositeBuilder decomposeWithOrder
INFO: Decomposing Gal with order
Jun 02, 2018 12:25:41 AM fr.lip6.move.gal.instantiate.GALRewriter flatten
INFO: Flatten gal took : 161 ms
Jun 02, 2018 12:25:41 AM fr.lip6.move.gal.instantiate.CompositeBuilder rewriteArraysToAllowPartition
INFO: Rewriting arrays to variables to allow decomposition.
Jun 02, 2018 12:25:42 AM fr.lip6.move.gal.instantiate.Instantiator fuseIsomorphicEffects
INFO: Removed a total of 116 redundant transitions.
Jun 02, 2018 12:25:42 AM fr.lip6.move.serialization.SerializationUtil systemToFile
INFO: Time to serialize gal into /home/mcc/execution/CTLFireability.pnml.gal : 31 ms
Jun 02, 2018 12:25:42 AM fr.lip6.move.serialization.SerializationUtil serializePropertiesForITSCTLTools
INFO: Time to serialize properties into /home/mcc/execution/CTLFireability.ctl : 10 ms
ITS-tools command line returned an error code 1

Sequence of Actions to be Executed by the VM

This is useful if one wants to reexecute the tool in the VM from the submitted image disk.

set -x
# this is for BenchKit: configuration of major elements for the test
export BK_INPUT="QuasiCertifProtocol-PT-18"
export BK_EXAMINATION="CTLFireability"
export BK_TOOL="itstoolsl"
export BK_RESULT_DIR="/tmp/BK_RESULTS/OUTPUTS"
export BK_TIME_CONFINEMENT="3600"
export BK_MEMORY_CONFINEMENT="16384"

# this is specific to your benchmark or test

export BIN_DIR="$HOME/BenchKit/bin"

# remove the execution directoty if it exists (to avoid increse of .vmdk images)
if [ -d execution ] ; then
rm -rf execution
fi

tar xzf /home/mcc/BenchKit/INPUTS/QuasiCertifProtocol-PT-18.tgz
mv QuasiCertifProtocol-PT-18 execution
cd execution
pwd
ls -lh

# this is for BenchKit: explicit launching of the test
echo "====================================================================="
echo " Generated by BenchKit 2-3637"
echo " Executing tool itstoolsl"
echo " Input is QuasiCertifProtocol-PT-18, examination is CTLFireability"
echo " Time confinement is $BK_TIME_CONFINEMENT seconds"
echo " Memory confinement is 16384 MBytes"
echo " Number of cores is 4"
echo " Run identifier is r141-qhx2-152673582600081"
echo "====================================================================="
echo
echo "--------------------"
echo "content from stdout:"
echo
echo "=== Data for post analysis generated by BenchKit (invocation template)"
echo
if [ "CTLFireability" = "UpperBounds" ] ; then
echo "The expected result is a vector of positive values"
echo NUM_VECTOR
elif [ "CTLFireability" != "StateSpace" ] ; then
echo "The expected result is a vector of booleans"
echo BOOL_VECTOR
else
echo "no data necessary for post analysis"
fi
echo
if [ -f "CTLFireability.txt" ] ; then
echo "here is the order used to build the result vector(from text file)"
for x in $(grep Property CTLFireability.txt | cut -d ' ' -f 2 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ -f "CTLFireability.xml" ] ; then # for cunf (txt files deleted;-)
echo echo "here is the order used to build the result vector(from xml file)"
for x in $(grep '' CTLFireability.xml | cut -d '>' -f 2 | cut -d '<' -f 1 | sort -u) ; do
echo "FORMULA_NAME $x"
done
fi
echo
echo "=== Now, execution of the tool begins"
echo
echo -n "BK_START "
date -u +%s%3N
echo
timeout -s 9 $BK_TIME_CONFINEMENT bash -c "/home/mcc/BenchKit/BenchKit_head.sh 2> STDERR ; echo ; echo -n \"BK_STOP \" ; date -u +%s%3N"
if [ $? -eq 137 ] ; then
echo
echo "BK_TIME_CONFINEMENT_REACHED"
fi
echo
echo "--------------------"
echo "content from stderr:"
echo
cat STDERR ;