Execution Chart

We display below the execution chart for this examination (boot time has been removed).

Trace from the execution

Waiting for the VM to be ready (probing ssh)
...................
/home/mcc/execution
total 23M
-rw-r--r-- 1 mcc users 29K May 15 18:54 CTLCardinality.txt
-rw-r--r-- 1 mcc users 87K May 15 18:54 CTLCardinality.xml
-rw-r--r-- 1 mcc users 742K May 15 18:54 CTLFireability.txt
-rw-r--r-- 1 mcc users 2.1M May 15 18:54 CTLFireability.xml
-rw-r--r-- 1 mcc users 4.0K May 15 18:50 GenericPropertiesDefinition.xml
-rw-r--r-- 1 mcc users 6.2K May 15 18:50 GenericPropertiesVerdict.xml
-rw-r--r-- 1 mcc users 15K May 15 18:54 LTLCardinality.txt
-rw-r--r-- 1 mcc users 39K May 15 18:54 LTLCardinality.xml
-rw-r--r-- 1 mcc users 242K May 15 18:54 LTLFireability.txt
-rw-r--r-- 1 mcc users 681K May 15 18:54 LTLFireability.xml
-rw-r--r-- 1 mcc users 18K May 15 18:54 ReachabilityCardinality.txt
-rw-r--r-- 1 mcc users 54K May 15 18:54 ReachabilityCardinality.xml
-rw-r--r-- 1 mcc users 110 May 15 18:54 ReachabilityDeadlock.txt
-rw-r--r-- 1 mcc users 348 May 15 18:54 ReachabilityDeadlock.xml
-rw-r--r-- 1 mcc users 267K May 15 18:54 ReachabilityFireability.txt
-rw-r--r-- 1 mcc users 718K May 15 18:54 ReachabilityFireability.xml
-rw-r--r-- 1 mcc users 2.7K May 15 18:54 UpperBounds.txt
-rw-r--r-- 1 mcc users 5.5K May 15 18:54 UpperBounds.xml
-rw-r--r-- 1 mcc users 5 May 15 18:50 equiv_col
-rw-r--r-- 1 mcc users 7 May 15 18:50 instance
-rw-r--r-- 1 mcc users 6 May 15 18:50 iscolored
-rw-r--r-- 1 mcc users 18M May 15 18:50 model.pnml
=====================================================================
Generated by BenchKit 2-3637
Executing tool itstoolsl
Input is PolyORBNT-PT-S10J40, examination is StateSpace
Time confinement is 3600 seconds
Memory confinement is 16384 MBytes
Number of cores is 4
Run identifier is r129-smll-152673531700379
=====================================================================

--------------------
content from stdout:

=== Data for post analysis generated by BenchKit (invocation template)

no data necessary for post analysis


=== Now, execution of the tool begins

BK_START 1527589509938

Converted graph to binary with : CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.louvain.binaries_1.0.0.201805241334/bin/convert-linux64, -i, /tmp/graph5127145371149179548.txt, -o, /tmp/graph5127145371149179548.bin, -w, /tmp/graph5127145371149179548.weights], workingDir=null]
Built communities with : CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.louvain.binaries_1.0.0.201805241334/bin/louvain-linux64, /tmp/graph5127145371149179548.bin, -l, -1, -v, -w, /tmp/graph5127145371149179548.weights, -q, 0, -e, 0.001], workingDir=null]
Invoking ITS tools like this :CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.201805241334/bin/its-reach-linux64, --gc-threshold, 2000000, --quiet, -i, /home/mcc/execution/StateSpace.pnml.gal, -t, CGAL, --stats], workingDir=/home/mcc/execution]

its-reach command run as :

/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.201805241334/bin/its-reach-linux64 --gc-threshold 2000000 --quiet -i /home/mcc/execution/StateSpace.pnml.gal -t CGAL --stats
built 126 ordering constraints for composite.
built 1049 ordering constraints for composite.
built 24 ordering constraints for composite.
built 11255 ordering constraints for composite.

BK_STOP 1527590267944

--------------------
content from stderr:

+ export BINDIR=/home/mcc/BenchKit/
+ BINDIR=/home/mcc/BenchKit/
++ pwd
+ export MODEL=/home/mcc/execution
+ MODEL=/home/mcc/execution
+ /home/mcc/BenchKit//runeclipse.sh /home/mcc/execution StateSpace -its -ltsminpath /home/mcc/BenchKit//lts_install_dir/ -louvain -smt
+ ulimit -s 65536
+ [[ -z '' ]]
+ export LTSMIN_MEM_SIZE=8589934592
+ LTSMIN_MEM_SIZE=8589934592
+ /home/mcc/BenchKit//itstools/its-tools -consoleLog -data /home/mcc/execution/workspace -pnfolder /home/mcc/execution -examination StateSpace -z3path /home/mcc/BenchKit//z3/bin/z3 -yices2path /home/mcc/BenchKit//yices/bin/yices -its -ltsminpath /home/mcc/BenchKit//lts_install_dir/ -louvain -smt -vmargs -Dosgi.locking=none -Declipse.stateSaveDelayInterval=-1 -Dosgi.configuration.area=/tmp/.eclipse -Xss8m -Xms40m -Xmx8192m -Dfile.encoding=UTF-8 -Dosgi.requiredJavaVersion=1.6
May 29, 2018 10:25:12 AM fr.lip6.move.gal.application.Application start
INFO: Running its-tools with arguments : [-pnfolder, /home/mcc/execution, -examination, StateSpace, -z3path, /home/mcc/BenchKit//z3/bin/z3, -yices2path, /home/mcc/BenchKit//yices/bin/yices, -its, -ltsminpath, /home/mcc/BenchKit//lts_install_dir/, -louvain, -smt]
May 29, 2018 10:25:12 AM fr.lip6.move.gal.application.MccTranslator transformPNML
INFO: Parsing pnml file : /home/mcc/execution/model.pnml
May 29, 2018 10:25:13 AM fr.lip6.move.gal.nupn.PTNetReader loadFromXML
INFO: Load time of PNML (sax parser for PT used): 1259 ms
May 29, 2018 10:25:13 AM fr.lip6.move.gal.pnml.togal.PTGALTransformer handlePage
INFO: Transformed 854 places.
May 29, 2018 10:25:14 AM fr.lip6.move.gal.pnml.togal.PTGALTransformer handlePage
INFO: Transformed 12340 transitions.
May 29, 2018 10:25:14 AM fr.lip6.move.gal.application.MccTranslator applyOrder
INFO: Applying decomposition
May 29, 2018 10:25:18 AM fr.lip6.move.gal.instantiate.GALRewriter flatten
INFO: Flatten gal took : 4217 ms
May 29, 2018 10:25:21 AM fr.lip6.move.gal.instantiate.GALRewriter flatten
INFO: Flatten gal took : 2969 ms
Begin: Tue May 29 10:25:26 2018

Computation of communities with the Newman-Girvan Modularity quality function

level 0:
start computation: Tue May 29 10:25:26 2018
network size: 854 nodes, 9650 links, 24680 weight
quality increased from -0.0437827 to 0.135114
end computation: Tue May 29 10:25:26 2018
level 1:
start computation: Tue May 29 10:25:26 2018
network size: 101 nodes, 2753 links, 24680 weight
quality increased from 0.135114 to 0.174644
end computation: Tue May 29 10:25:26 2018
level 2:
start computation: Tue May 29 10:25:26 2018
network size: 12 nodes, 112 links, 24680 weight
quality increased from 0.174644 to 0.176293
end computation: Tue May 29 10:25:26 2018
level 3:
start computation: Tue May 29 10:25:26 2018
network size: 10 nodes, 100 links, 24680 weight
quality increased from 0.176293 to 0.176293
end computation: Tue May 29 10:25:26 2018
End: Tue May 29 10:25:26 2018
Total duration: 0 sec
0.176293
May 29, 2018 10:25:26 AM fr.lip6.move.gal.instantiate.CompositeBuilder decomposeWithOrder
INFO: Decomposing Gal with order
May 29, 2018 10:25:29 AM fr.lip6.move.gal.instantiate.GALRewriter flatten
INFO: Flatten gal took : 2888 ms
May 29, 2018 10:25:29 AM fr.lip6.move.gal.instantiate.CompositeBuilder rewriteArraysToAllowPartition
INFO: Rewriting arrays to variables to allow decomposition.
May 29, 2018 10:26:19 AM fr.lip6.move.gal.instantiate.Instantiator fuseIsomorphicEffects
INFO: Removed a total of 57577 redundant transitions.
May 29, 2018 10:26:19 AM fr.lip6.move.serialization.SerializationUtil systemToFile
INFO: Time to serialize gal into /home/mcc/execution/StateSpace.pnml.gal : 172 ms
ITS-tools command line returned an error code 137

Sequence of Actions to be Executed by the VM

This is useful if one wants to reexecute the tool in the VM from the submitted image disk.

set -x
# this is for BenchKit: configuration of major elements for the test
export BK_INPUT="PolyORBNT-PT-S10J40"
export BK_EXAMINATION="StateSpace"
export BK_TOOL="itstoolsl"
export BK_RESULT_DIR="/tmp/BK_RESULTS/OUTPUTS"
export BK_TIME_CONFINEMENT="3600"
export BK_MEMORY_CONFINEMENT="16384"

# this is specific to your benchmark or test

export BIN_DIR="$HOME/BenchKit/bin"

# remove the execution directoty if it exists (to avoid increse of .vmdk images)
if [ -d execution ] ; then
rm -rf execution
fi

tar xzf /home/mcc/BenchKit/INPUTS/PolyORBNT-PT-S10J40.tgz
mv PolyORBNT-PT-S10J40 execution
cd execution
pwd
ls -lh

# this is for BenchKit: explicit launching of the test
echo "====================================================================="
echo " Generated by BenchKit 2-3637"
echo " Executing tool itstoolsl"
echo " Input is PolyORBNT-PT-S10J40, examination is StateSpace"
echo " Time confinement is $BK_TIME_CONFINEMENT seconds"
echo " Memory confinement is 16384 MBytes"
echo " Number of cores is 4"
echo " Run identifier is r129-smll-152673531700379"
echo "====================================================================="
echo
echo "--------------------"
echo "content from stdout:"
echo
echo "=== Data for post analysis generated by BenchKit (invocation template)"
echo
if [ "StateSpace" = "UpperBounds" ] ; then
echo "The expected result is a vector of positive values"
echo NUM_VECTOR
elif [ "StateSpace" != "StateSpace" ] ; then
echo "The expected result is a vector of booleans"
echo BOOL_VECTOR
else
echo "no data necessary for post analysis"
fi
echo
if [ -f "StateSpace.txt" ] ; then
echo "here is the order used to build the result vector(from text file)"
for x in $(grep Property StateSpace.txt | cut -d ' ' -f 2 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ -f "StateSpace.xml" ] ; then # for cunf (txt files deleted;-)
echo echo "here is the order used to build the result vector(from xml file)"
for x in $(grep '' StateSpace.xml | cut -d '>' -f 2 | cut -d '<' -f 1 | sort -u) ; do
echo "FORMULA_NAME $x"
done
fi
echo
echo "=== Now, execution of the tool begins"
echo
echo -n "BK_START "
date -u +%s%3N
echo
timeout -s 9 $BK_TIME_CONFINEMENT bash -c "/home/mcc/BenchKit/BenchKit_head.sh 2> STDERR ; echo ; echo -n \"BK_STOP \" ; date -u +%s%3N"
if [ $? -eq 137 ] ; then
echo
echo "BK_TIME_CONFINEMENT_REACHED"
fi
echo
echo "--------------------"
echo "content from stderr:"
echo
cat STDERR ;