Execution Chart

We display below the execution chart for this examination (boot time has been removed).

Trace from the execution

Waiting for the VM to be ready (probing ssh)
....................
/home/mcc/execution
total 2.0M
-rw-r--r-- 1 mcc users 12K May 15 18:54 CTLCardinality.txt
-rw-r--r-- 1 mcc users 39K May 15 18:54 CTLCardinality.xml
-rw-r--r-- 1 mcc users 24K May 15 18:54 CTLFireability.txt
-rw-r--r-- 1 mcc users 82K May 15 18:54 CTLFireability.xml
-rw-r--r-- 1 mcc users 4.0K May 15 18:50 GenericPropertiesDefinition.xml
-rw-r--r-- 1 mcc users 6.2K May 15 18:50 GenericPropertiesVerdict.xml
-rw-r--r-- 1 mcc users 3.8K May 15 18:54 LTLCardinality.txt
-rw-r--r-- 1 mcc users 14K May 15 18:54 LTLCardinality.xml
-rw-r--r-- 1 mcc users 3.1K May 15 18:54 LTLFireability.txt
-rw-r--r-- 1 mcc users 13K May 15 18:54 LTLFireability.xml
-rw-r--r-- 1 mcc users 9.9K May 15 18:54 ReachabilityCardinality.txt
-rw-r--r-- 1 mcc users 31K May 15 18:54 ReachabilityCardinality.xml
-rw-r--r-- 1 mcc users 110 May 15 18:54 ReachabilityDeadlock.txt
-rw-r--r-- 1 mcc users 348 May 15 18:54 ReachabilityDeadlock.xml
-rw-r--r-- 1 mcc users 52K May 15 18:54 ReachabilityFireability.txt
-rw-r--r-- 1 mcc users 147K May 15 18:54 ReachabilityFireability.xml
-rw-r--r-- 1 mcc users 4.4K May 15 18:54 UpperBounds.txt
-rw-r--r-- 1 mcc users 9.3K May 15 18:54 UpperBounds.xml
-rw-r--r-- 1 mcc users 5 May 15 18:50 equiv_col
-rw-r--r-- 1 mcc users 7 May 15 18:50 instance
-rw-r--r-- 1 mcc users 6 May 15 18:50 iscolored
-rw-r--r-- 1 mcc users 1.6M May 15 18:50 model.pnml
=====================================================================
Generated by BenchKit 2-3637
Executing tool itstoolsl
Input is PolyORBNT-PT-S05J20, examination is StateSpace
Time confinement is 3600 seconds
Memory confinement is 16384 MBytes
Number of cores is 4
Run identifier is r129-smll-152673531700330
=====================================================================

--------------------
content from stdout:

=== Data for post analysis generated by BenchKit (invocation template)

no data necessary for post analysis


=== Now, execution of the tool begins

BK_START 1527548817297

Converted graph to binary with : CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.louvain.binaries_1.0.0.201805241334/bin/convert-linux64, -i, /tmp/graph7899515997910418559.txt, -o, /tmp/graph7899515997910418559.bin, -w, /tmp/graph7899515997910418559.weights], workingDir=null]
Built communities with : CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.louvain.binaries_1.0.0.201805241334/bin/louvain-linux64, /tmp/graph7899515997910418559.bin, -l, -1, -v, -w, /tmp/graph7899515997910418559.weights, -q, 0, -e, 0.001], workingDir=null]
Invoking ITS tools like this :CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.201805241334/bin/its-reach-linux64, --gc-threshold, 2000000, --quiet, -i, /home/mcc/execution/StateSpace.pnml.gal, -t, CGAL, --stats], workingDir=/home/mcc/execution]

its-reach command run as :

/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.201805241334/bin/its-reach-linux64 --gc-threshold 2000000 --quiet -i /home/mcc/execution/StateSpace.pnml.gal -t CGAL --stats
built 13 ordering constraints for composite.
built 874 ordering constraints for composite.
built 294 ordering constraints for composite.
built 23 ordering constraints for composite.
built 14 ordering constraints for composite.
built 87 ordering constraints for composite.

BK_STOP 1527549482481

--------------------
content from stderr:

+ export BINDIR=/home/mcc/BenchKit/
+ BINDIR=/home/mcc/BenchKit/
++ pwd
+ export MODEL=/home/mcc/execution
+ MODEL=/home/mcc/execution
+ /home/mcc/BenchKit//runeclipse.sh /home/mcc/execution StateSpace -its -ltsminpath /home/mcc/BenchKit//lts_install_dir/ -louvain -smt
+ ulimit -s 65536
+ [[ -z '' ]]
+ export LTSMIN_MEM_SIZE=8589934592
+ LTSMIN_MEM_SIZE=8589934592
+ /home/mcc/BenchKit//itstools/its-tools -consoleLog -data /home/mcc/execution/workspace -pnfolder /home/mcc/execution -examination StateSpace -z3path /home/mcc/BenchKit//z3/bin/z3 -yices2path /home/mcc/BenchKit//yices/bin/yices -its -ltsminpath /home/mcc/BenchKit//lts_install_dir/ -louvain -smt -vmargs -Dosgi.locking=none -Declipse.stateSaveDelayInterval=-1 -Dosgi.configuration.area=/tmp/.eclipse -Xss8m -Xms40m -Xmx8192m -Dfile.encoding=UTF-8 -Dosgi.requiredJavaVersion=1.6
May 28, 2018 11:06:59 PM fr.lip6.move.gal.application.Application start
INFO: Running its-tools with arguments : [-pnfolder, /home/mcc/execution, -examination, StateSpace, -z3path, /home/mcc/BenchKit//z3/bin/z3, -yices2path, /home/mcc/BenchKit//yices/bin/yices, -its, -ltsminpath, /home/mcc/BenchKit//lts_install_dir/, -louvain, -smt]
May 28, 2018 11:06:59 PM fr.lip6.move.gal.application.MccTranslator transformPNML
INFO: Parsing pnml file : /home/mcc/execution/model.pnml
May 28, 2018 11:06:59 PM fr.lip6.move.gal.nupn.PTNetReader loadFromXML
INFO: Load time of PNML (sax parser for PT used): 244 ms
May 28, 2018 11:06:59 PM fr.lip6.move.gal.pnml.togal.PTGALTransformer handlePage
INFO: Transformed 349 places.
May 28, 2018 11:06:59 PM fr.lip6.move.gal.pnml.togal.PTGALTransformer handlePage
INFO: Transformed 1210 transitions.
May 28, 2018 11:06:59 PM fr.lip6.move.gal.application.MccTranslator applyOrder
INFO: Applying decomposition
May 28, 2018 11:07:00 PM fr.lip6.move.gal.instantiate.GALRewriter flatten
INFO: Flatten gal took : 548 ms
May 28, 2018 11:07:00 PM fr.lip6.move.gal.instantiate.GALRewriter flatten
INFO: Flatten gal took : 295 ms
Begin: Mon May 28 23:07:01 2018

Computation of communities with the Newman-Girvan Modularity quality function

level 0:
start computation: Mon May 28 23:07:01 2018
network size: 349 nodes, 3270 links, 2420 weight
quality increased from -0.0357608 to 0.304606
end computation: Mon May 28 23:07:01 2018
level 1:
start computation: Mon May 28 23:07:01 2018
network size: 53 nodes, 1245 links, 2420 weight
quality increased from 0.304606 to 0.391934
end computation: Mon May 28 23:07:01 2018
level 2:
start computation: Mon May 28 23:07:01 2018
network size: 24 nodes, 444 links, 2420 weight
quality increased from 0.391934 to 0.414015
end computation: Mon May 28 23:07:01 2018
level 3:
start computation: Mon May 28 23:07:01 2018
network size: 5 nodes, 21 links, 2420 weight
quality increased from 0.414015 to 0.414015
end computation: Mon May 28 23:07:01 2018
End: Mon May 28 23:07:01 2018
Total duration: 0 sec
0.414015
May 28, 2018 11:07:01 PM fr.lip6.move.gal.instantiate.CompositeBuilder decomposeWithOrder
INFO: Decomposing Gal with order
May 28, 2018 11:07:01 PM fr.lip6.move.gal.instantiate.GALRewriter flatten
INFO: Flatten gal took : 246 ms
May 28, 2018 11:07:01 PM fr.lip6.move.gal.instantiate.CompositeBuilder rewriteArraysToAllowPartition
INFO: Rewriting arrays to variables to allow decomposition.
May 28, 2018 11:07:03 PM fr.lip6.move.gal.instantiate.Instantiator fuseIsomorphicEffects
INFO: Removed a total of 2415 redundant transitions.
May 28, 2018 11:07:03 PM fr.lip6.move.serialization.SerializationUtil systemToFile
INFO: Time to serialize gal into /home/mcc/execution/StateSpace.pnml.gal : 34 ms
ITS-tools command line returned an error code 137

Sequence of Actions to be Executed by the VM

This is useful if one wants to reexecute the tool in the VM from the submitted image disk.

set -x
# this is for BenchKit: configuration of major elements for the test
export BK_INPUT="PolyORBNT-PT-S05J20"
export BK_EXAMINATION="StateSpace"
export BK_TOOL="itstoolsl"
export BK_RESULT_DIR="/tmp/BK_RESULTS/OUTPUTS"
export BK_TIME_CONFINEMENT="3600"
export BK_MEMORY_CONFINEMENT="16384"

# this is specific to your benchmark or test

export BIN_DIR="$HOME/BenchKit/bin"

# remove the execution directoty if it exists (to avoid increse of .vmdk images)
if [ -d execution ] ; then
rm -rf execution
fi

tar xzf /home/mcc/BenchKit/INPUTS/PolyORBNT-PT-S05J20.tgz
mv PolyORBNT-PT-S05J20 execution
cd execution
pwd
ls -lh

# this is for BenchKit: explicit launching of the test
echo "====================================================================="
echo " Generated by BenchKit 2-3637"
echo " Executing tool itstoolsl"
echo " Input is PolyORBNT-PT-S05J20, examination is StateSpace"
echo " Time confinement is $BK_TIME_CONFINEMENT seconds"
echo " Memory confinement is 16384 MBytes"
echo " Number of cores is 4"
echo " Run identifier is r129-smll-152673531700330"
echo "====================================================================="
echo
echo "--------------------"
echo "content from stdout:"
echo
echo "=== Data for post analysis generated by BenchKit (invocation template)"
echo
if [ "StateSpace" = "UpperBounds" ] ; then
echo "The expected result is a vector of positive values"
echo NUM_VECTOR
elif [ "StateSpace" != "StateSpace" ] ; then
echo "The expected result is a vector of booleans"
echo BOOL_VECTOR
else
echo "no data necessary for post analysis"
fi
echo
if [ -f "StateSpace.txt" ] ; then
echo "here is the order used to build the result vector(from text file)"
for x in $(grep Property StateSpace.txt | cut -d ' ' -f 2 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ -f "StateSpace.xml" ] ; then # for cunf (txt files deleted;-)
echo echo "here is the order used to build the result vector(from xml file)"
for x in $(grep '' StateSpace.xml | cut -d '>' -f 2 | cut -d '<' -f 1 | sort -u) ; do
echo "FORMULA_NAME $x"
done
fi
echo
echo "=== Now, execution of the tool begins"
echo
echo -n "BK_START "
date -u +%s%3N
echo
timeout -s 9 $BK_TIME_CONFINEMENT bash -c "/home/mcc/BenchKit/BenchKit_head.sh 2> STDERR ; echo ; echo -n \"BK_STOP \" ; date -u +%s%3N"
if [ $? -eq 137 ] ; then
echo
echo "BK_TIME_CONFINEMENT_REACHED"
fi
echo
echo "--------------------"
echo "content from stderr:"
echo
cat STDERR ;