Execution Chart

We display below the execution chart for this examination (boot time has been removed).

Trace from the execution

Waiting for the VM to be ready (probing ssh)
...................
/home/mcc/execution
total 24M
-rw-r--r-- 1 mcc users 9.8K May 15 18:54 CTLCardinality.txt
-rw-r--r-- 1 mcc users 32K May 15 18:54 CTLCardinality.xml
-rw-r--r-- 1 mcc users 239K May 15 18:54 CTLFireability.txt
-rw-r--r-- 1 mcc users 732K May 15 18:54 CTLFireability.xml
-rw-r--r-- 1 mcc users 4.0K May 15 18:50 GenericPropertiesDefinition.xml
-rw-r--r-- 1 mcc users 5.9K May 15 18:50 GenericPropertiesVerdict.xml
-rw-r--r-- 1 mcc users 9.0K May 15 18:54 LTLCardinality.txt
-rw-r--r-- 1 mcc users 26K May 15 18:54 LTLCardinality.xml
-rw-r--r-- 1 mcc users 12K May 15 18:54 LTLFireability.txt
-rw-r--r-- 1 mcc users 37K May 15 18:54 LTLFireability.xml
-rw-r--r-- 1 mcc users 9.1K May 15 18:54 ReachabilityCardinality.txt
-rw-r--r-- 1 mcc users 32K May 15 18:54 ReachabilityCardinality.xml
-rw-r--r-- 1 mcc users 113 May 15 18:54 ReachabilityDeadlock.txt
-rw-r--r-- 1 mcc users 351 May 15 18:54 ReachabilityDeadlock.xml
-rw-r--r-- 1 mcc users 825K May 15 18:54 ReachabilityFireability.txt
-rw-r--r-- 1 mcc users 2.6M May 15 18:54 ReachabilityFireability.xml
-rw-r--r-- 1 mcc users 2.2K May 15 18:54 UpperBounds.txt
-rw-r--r-- 1 mcc users 4.7K May 15 18:54 UpperBounds.xml
-rw-r--r-- 1 mcc users 5 May 15 18:50 equiv_col
-rw-r--r-- 1 mcc users 10 May 15 18:50 instance
-rw-r--r-- 1 mcc users 6 May 15 18:50 iscolored
-rw-r--r-- 1 mcc users 19M May 15 18:50 model.pnml
=====================================================================
Generated by BenchKit 2-3637
Executing tool itstoolsl
Input is PolyORBLF-PT-S06J04T08, examination is ReachabilityDeadlock
Time confinement is 3600 seconds
Memory confinement is 16384 MBytes
Number of cores is 4
Run identifier is r129-smll-152673531600237
=====================================================================

--------------------
content from stdout:

=== Data for post analysis generated by BenchKit (invocation template)

The expected result is a vector of booleans
BOOL_VECTOR

here is the order used to build the result vector(from text file)
FORMULA_NAME PolyORBLF-PT-S06J04T08-ReachabilityDeadlock-0

=== Now, execution of the tool begins

BK_START 1527468312697

Flatten gal took : 3727 ms
Constant places removed 6 places and 0 transitions.
Reduce isomorphic transitions removed 10760 transitions.
Performed 104 Post agglomeration using F-continuation condition.
Iterating post reduction 0 with 10870 rules applied. Total rules applied 10870 place count 804 transition count 3150
Constant places removed 104 places and 0 transitions.
Iterating post reduction 1 with 104 rules applied. Total rules applied 10974 place count 700 transition count 3150
Performed 88 Pre agglomeration using Quasi-Persistent + HF-interchangeable + Divergent Free condition.
Pre-agglomeration after 2 with 88 Pre rules applied. Total rules applied 10974 place count 700 transition count 3062
Constant places removed 88 places and 0 transitions.
Iterating post reduction 2 with 88 rules applied. Total rules applied 11062 place count 612 transition count 3062
Symmetric choice reduction at 3 with 16 rule applications. Total rules 11078 place count 612 transition count 3062
Constant places removed 16 places and 16 transitions.
Iterating post reduction 3 with 16 rules applied. Total rules applied 11094 place count 596 transition count 3046
Symmetric choice reduction at 4 with 2 rule applications. Total rules 11096 place count 596 transition count 3046
Constant places removed 2 places and 16 transitions.
Iterating post reduction 4 with 2 rules applied. Total rules applied 11098 place count 594 transition count 3030
Performed 72 Post agglomeration using F-continuation condition.
Constant places removed 72 places and 0 transitions.
Iterating post reduction 5 with 72 rules applied. Total rules applied 11170 place count 522 transition count 2958
Applied a total of 11170 rules in 983 ms. Remains 522 /810 variables (removed 288) and now considering 2958/14014 (removed 11056) transitions.
Normalized transition count is 2910
// Phase 1: matrix 2910 rows 522 cols
Using solver Z3 to compute partial order matrices.
Built C files in :
/home/mcc/execution
Running compilation step : CommandLine [args=[gcc, -c, -I/home/mcc/BenchKit//lts_install_dir//include, -I., -std=c99, -fPIC, -O3, model.c], workingDir=/home/mcc/execution]
Converted graph to binary with : CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.louvain.binaries_1.0.0.201805241334/bin/convert-linux64, -i, /tmp/graph8090572434558771058.txt, -o, /tmp/graph8090572434558771058.bin, -w, /tmp/graph8090572434558771058.weights], workingDir=null]
Built communities with : CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.louvain.binaries_1.0.0.201805241334/bin/louvain-linux64, /tmp/graph8090572434558771058.bin, -l, -1, -v, -w, /tmp/graph8090572434558771058.weights, -q, 0, -e, 0.001], workingDir=null]
Invoking ITS tools like this :CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.201805241334/bin/its-ctl-linux64, --gc-threshold, 2000000, --quiet, -i, /home/mcc/execution/ReachabilityDeadlock.pnml.gal, -t, CGAL, -ctl, DEADLOCK], workingDir=/home/mcc/execution]

its-ctl command run as :

/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.201805241334/bin/its-ctl-linux64 --gc-threshold 2000000 --quiet -i /home/mcc/execution/ReachabilityDeadlock.pnml.gal -t CGAL -ctl DEADLOCK
No direction supplied, using forward translation only.
built 21 ordering constraints for composite.
built 744 ordering constraints for composite.
built 328 ordering constraints for composite.
built 118 ordering constraints for composite.
built 430 ordering constraints for composite.
Compilation finished in 54929 ms.
Running link step : CommandLine [args=[gcc, -shared, -o, gal.so, model.o], workingDir=/home/mcc/execution]
Link finished in 82 ms.
Running LTSmin : CommandLine [args=[/home/mcc/BenchKit//lts_install_dir//bin/pins2lts-mc, ./gal.so, --threads=1, -p, --pins-guards, --when, -d], workingDir=/home/mcc/execution]
LTSmin run took 68669 ms.
FORMULA PolyORBLF-PT-S06J04T08-ReachabilityDeadlock-0 TRUE TECHNIQUES PARTIAL_ORDER EXPLICIT LTSMIN SAT_SMT
ITS tools runner thread asked to quit. Dying gracefully.

BK_STOP 1527468450729

--------------------
content from stderr:

+ export BINDIR=/home/mcc/BenchKit/
+ BINDIR=/home/mcc/BenchKit/
++ pwd
+ export MODEL=/home/mcc/execution
+ MODEL=/home/mcc/execution
+ /home/mcc/BenchKit//runeclipse.sh /home/mcc/execution ReachabilityDeadlock -its -ltsminpath /home/mcc/BenchKit//lts_install_dir/ -louvain -smt
+ ulimit -s 65536
+ [[ -z '' ]]
+ export LTSMIN_MEM_SIZE=8589934592
+ LTSMIN_MEM_SIZE=8589934592
+ /home/mcc/BenchKit//itstools/its-tools -consoleLog -data /home/mcc/execution/workspace -pnfolder /home/mcc/execution -examination ReachabilityDeadlock -z3path /home/mcc/BenchKit//z3/bin/z3 -yices2path /home/mcc/BenchKit//yices/bin/yices -its -ltsminpath /home/mcc/BenchKit//lts_install_dir/ -louvain -smt -vmargs -Dosgi.locking=none -Declipse.stateSaveDelayInterval=-1 -Dosgi.configuration.area=/tmp/.eclipse -Xss8m -Xms40m -Xmx8192m -Dfile.encoding=UTF-8 -Dosgi.requiredJavaVersion=1.6
May 28, 2018 12:45:14 AM fr.lip6.move.gal.application.Application start
INFO: Running its-tools with arguments : [-pnfolder, /home/mcc/execution, -examination, ReachabilityDeadlock, -z3path, /home/mcc/BenchKit//z3/bin/z3, -yices2path, /home/mcc/BenchKit//yices/bin/yices, -its, -ltsminpath, /home/mcc/BenchKit//lts_install_dir/, -louvain, -smt]
May 28, 2018 12:45:14 AM fr.lip6.move.gal.application.MccTranslator transformPNML
INFO: Parsing pnml file : /home/mcc/execution/model.pnml
May 28, 2018 12:45:15 AM fr.lip6.move.gal.nupn.PTNetReader loadFromXML
INFO: Load time of PNML (sax parser for PT used): 961 ms
May 28, 2018 12:45:15 AM fr.lip6.move.gal.pnml.togal.PTGALTransformer handlePage
INFO: Transformed 810 places.
May 28, 2018 12:45:16 AM fr.lip6.move.gal.pnml.togal.PTGALTransformer handlePage
INFO: Transformed 14014 transitions.
May 28, 2018 12:45:20 AM fr.lip6.move.gal.instantiate.GALRewriter flatten
INFO: Flatten gal took : 3722 ms
May 28, 2018 12:45:20 AM fr.lip6.move.serialization.SerializationUtil systemToFile
INFO: Time to serialize gal into /home/mcc/execution/model.pnml.simple.gal : 250 ms
May 28, 2018 12:45:22 AM fr.lip6.move.gal.semantics.DeterministicNextBuilder getDeterministicNext
INFO: Input system was already deterministic with 14014 transitions.
May 28, 2018 12:45:25 AM fr.lip6.move.gal.application.MccTranslator applyOrder
INFO: Applying decomposition
May 28, 2018 12:45:25 AM fr.lip6.move.gal.semantics.DeterministicNextBuilder getDeterministicNext
INFO: Input system was already deterministic with 2958 transitions.
May 28, 2018 12:45:25 AM fr.lip6.move.gal.gal2pins.Gal2PinsTransformerNext transform
INFO: Too many transitions (2958) to apply POR reductions. Disabling POR matrices.
May 28, 2018 12:45:25 AM fr.lip6.move.gal.instantiate.GALRewriter flatten
INFO: Flatten gal took : 534 ms
May 28, 2018 12:45:25 AM fr.lip6.move.gal.gal2pins.Gal2PinsTransformerNext transform
INFO: Built C files in 671ms conformant to PINS in folder :/home/mcc/execution
May 28, 2018 12:45:26 AM fr.lip6.move.gal.instantiate.GALRewriter flatten
INFO: Flatten gal took : 525 ms
Begin: Mon May 28 00:45:26 2018

Computation of communities with the Newman-Girvan Modularity quality function

level 0:
start computation: Mon May 28 00:45:26 2018
network size: 522 nodes, 7554 links, 5916 weight
quality increased from -0.0184544 to 0.44476
end computation: Mon May 28 00:45:26 2018
level 1:
start computation: Mon May 28 00:45:26 2018
network size: 38 nodes, 390 links, 5916 weight
quality increased from 0.44476 to 0.480108
end computation: Mon May 28 00:45:26 2018
level 2:
start computation: Mon May 28 00:45:26 2018
network size: 8 nodes, 42 links, 5916 weight
quality increased from 0.480108 to 0.480108
end computation: Mon May 28 00:45:26 2018
End: Mon May 28 00:45:26 2018
Total duration: 0 sec
0.480108
May 28, 2018 12:45:26 AM fr.lip6.move.gal.instantiate.CompositeBuilder decomposeWithOrder
INFO: Decomposing Gal with order
May 28, 2018 12:45:27 AM fr.lip6.move.gal.instantiate.GALRewriter flatten
INFO: Flatten gal took : 429 ms
May 28, 2018 12:45:27 AM fr.lip6.move.gal.instantiate.CompositeBuilder rewriteArraysToAllowPartition
INFO: Rewriting arrays to variables to allow decomposition.
May 28, 2018 12:45:29 AM fr.lip6.move.gal.instantiate.Instantiator fuseIsomorphicEffects
INFO: Removed a total of 1299 redundant transitions.
May 28, 2018 12:45:29 AM fr.lip6.move.serialization.SerializationUtil systemToFile
INFO: Time to serialize gal into /home/mcc/execution/ReachabilityDeadlock.pnml.gal : 65 ms

Sequence of Actions to be Executed by the VM

This is useful if one wants to reexecute the tool in the VM from the submitted image disk.

set -x
# this is for BenchKit: configuration of major elements for the test
export BK_INPUT="PolyORBLF-PT-S06J04T08"
export BK_EXAMINATION="ReachabilityDeadlock"
export BK_TOOL="itstoolsl"
export BK_RESULT_DIR="/tmp/BK_RESULTS/OUTPUTS"
export BK_TIME_CONFINEMENT="3600"
export BK_MEMORY_CONFINEMENT="16384"

# this is specific to your benchmark or test

export BIN_DIR="$HOME/BenchKit/bin"

# remove the execution directoty if it exists (to avoid increse of .vmdk images)
if [ -d execution ] ; then
rm -rf execution
fi

tar xzf /home/mcc/BenchKit/INPUTS/PolyORBLF-PT-S06J04T08.tgz
mv PolyORBLF-PT-S06J04T08 execution
cd execution
pwd
ls -lh

# this is for BenchKit: explicit launching of the test
echo "====================================================================="
echo " Generated by BenchKit 2-3637"
echo " Executing tool itstoolsl"
echo " Input is PolyORBLF-PT-S06J04T08, examination is ReachabilityDeadlock"
echo " Time confinement is $BK_TIME_CONFINEMENT seconds"
echo " Memory confinement is 16384 MBytes"
echo " Number of cores is 4"
echo " Run identifier is r129-smll-152673531600237"
echo "====================================================================="
echo
echo "--------------------"
echo "content from stdout:"
echo
echo "=== Data for post analysis generated by BenchKit (invocation template)"
echo
if [ "ReachabilityDeadlock" = "UpperBounds" ] ; then
echo "The expected result is a vector of positive values"
echo NUM_VECTOR
elif [ "ReachabilityDeadlock" != "StateSpace" ] ; then
echo "The expected result is a vector of booleans"
echo BOOL_VECTOR
else
echo "no data necessary for post analysis"
fi
echo
if [ -f "ReachabilityDeadlock.txt" ] ; then
echo "here is the order used to build the result vector(from text file)"
for x in $(grep Property ReachabilityDeadlock.txt | cut -d ' ' -f 2 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ -f "ReachabilityDeadlock.xml" ] ; then # for cunf (txt files deleted;-)
echo echo "here is the order used to build the result vector(from xml file)"
for x in $(grep '' ReachabilityDeadlock.xml | cut -d '>' -f 2 | cut -d '<' -f 1 | sort -u) ; do
echo "FORMULA_NAME $x"
done
fi
echo
echo "=== Now, execution of the tool begins"
echo
echo -n "BK_START "
date -u +%s%3N
echo
timeout -s 9 $BK_TIME_CONFINEMENT bash -c "/home/mcc/BenchKit/BenchKit_head.sh 2> STDERR ; echo ; echo -n \"BK_STOP \" ; date -u +%s%3N"
if [ $? -eq 137 ] ; then
echo
echo "BK_TIME_CONFINEMENT_REACHED"
fi
echo
echo "--------------------"
echo "content from stderr:"
echo
cat STDERR ;