Execution Chart

We display below the execution chart for this examination (boot time has been removed).

Trace from the execution

Waiting for the VM to be ready (probing ssh)
.......................
/home/mcc/execution
total 4.2M
-rw-r--r-- 1 mcc users 8.6K May 15 18:54 CTLCardinality.txt
-rw-r--r-- 1 mcc users 35K May 15 18:54 CTLCardinality.xml
-rw-r--r-- 1 mcc users 13K May 15 18:54 CTLFireability.txt
-rw-r--r-- 1 mcc users 50K May 15 18:54 CTLFireability.xml
-rw-r--r-- 1 mcc users 4.0K May 15 18:50 GenericPropertiesDefinition.xml
-rw-r--r-- 1 mcc users 5.9K May 15 18:50 GenericPropertiesVerdict.xml
-rw-r--r-- 1 mcc users 8.8K May 15 18:54 LTLCardinality.txt
-rw-r--r-- 1 mcc users 25K May 15 18:54 LTLCardinality.xml
-rw-r--r-- 1 mcc users 4.0K May 15 18:54 LTLFireability.txt
-rw-r--r-- 1 mcc users 15K May 15 18:54 LTLFireability.xml
-rw-r--r-- 1 mcc users 7.8K May 15 18:54 ReachabilityCardinality.txt
-rw-r--r-- 1 mcc users 27K May 15 18:54 ReachabilityCardinality.xml
-rw-r--r-- 1 mcc users 113 May 15 18:54 ReachabilityDeadlock.txt
-rw-r--r-- 1 mcc users 351 May 15 18:54 ReachabilityDeadlock.xml
-rw-r--r-- 1 mcc users 44K May 15 18:54 ReachabilityFireability.txt
-rw-r--r-- 1 mcc users 143K May 15 18:54 ReachabilityFireability.xml
-rw-r--r-- 1 mcc users 2.7K May 15 18:54 UpperBounds.txt
-rw-r--r-- 1 mcc users 5.6K May 15 18:54 UpperBounds.xml
-rw-r--r-- 1 mcc users 5 May 15 18:50 equiv_col
-rw-r--r-- 1 mcc users 10 May 15 18:50 instance
-rw-r--r-- 1 mcc users 6 May 15 18:50 iscolored
-rw-r--r-- 1 mcc users 3.8M May 15 18:50 model.pnml
=====================================================================
Generated by BenchKit 2-3637
Executing tool itstoolsl
Input is PolyORBLF-PT-S04J06T06, examination is CTLFireability
Time confinement is 3600 seconds
Memory confinement is 16384 MBytes
Number of cores is 4
Run identifier is r129-smll-152673531500200
=====================================================================

--------------------
content from stdout:

=== Data for post analysis generated by BenchKit (invocation template)

The expected result is a vector of booleans
BOOL_VECTOR

here is the order used to build the result vector(from text file)
FORMULA_NAME PolyORBLF-PT-S04J06T06-CTLFireability-00
FORMULA_NAME PolyORBLF-PT-S04J06T06-CTLFireability-01
FORMULA_NAME PolyORBLF-PT-S04J06T06-CTLFireability-02
FORMULA_NAME PolyORBLF-PT-S04J06T06-CTLFireability-03
FORMULA_NAME PolyORBLF-PT-S04J06T06-CTLFireability-04
FORMULA_NAME PolyORBLF-PT-S04J06T06-CTLFireability-05
FORMULA_NAME PolyORBLF-PT-S04J06T06-CTLFireability-06
FORMULA_NAME PolyORBLF-PT-S04J06T06-CTLFireability-07
FORMULA_NAME PolyORBLF-PT-S04J06T06-CTLFireability-08
FORMULA_NAME PolyORBLF-PT-S04J06T06-CTLFireability-09
FORMULA_NAME PolyORBLF-PT-S04J06T06-CTLFireability-10
FORMULA_NAME PolyORBLF-PT-S04J06T06-CTLFireability-11
FORMULA_NAME PolyORBLF-PT-S04J06T06-CTLFireability-12
FORMULA_NAME PolyORBLF-PT-S04J06T06-CTLFireability-13
FORMULA_NAME PolyORBLF-PT-S04J06T06-CTLFireability-14
FORMULA_NAME PolyORBLF-PT-S04J06T06-CTLFireability-15

=== Now, execution of the tool begins

BK_START 1527434788961

Converted graph to binary with : CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.louvain.binaries_1.0.0.201805241334/bin/convert-linux64, -i, /tmp/graph8988745522410530418.txt, -o, /tmp/graph8988745522410530418.bin, -w, /tmp/graph8988745522410530418.weights], workingDir=null]
Built communities with : CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.louvain.binaries_1.0.0.201805241334/bin/louvain-linux64, /tmp/graph8988745522410530418.bin, -l, -1, -v, -w, /tmp/graph8988745522410530418.weights, -q, 0, -e, 0.001], workingDir=null]
Invoking ITS tools like this :CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.201805241334/bin/its-ctl-linux64, --gc-threshold, 2000000, --quiet, -i, /home/mcc/execution/CTLFireability.pnml.gal, -t, CGAL, -ctl, /home/mcc/execution/CTLFireability.ctl], workingDir=/home/mcc/execution]

its-ctl command run as :

/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.201805241334/bin/its-ctl-linux64 --gc-threshold 2000000 --quiet -i /home/mcc/execution/CTLFireability.pnml.gal -t CGAL -ctl /home/mcc/execution/CTLFireability.ctl
No direction supplied, using forward translation only.
Parsed 16 CTL formulae.
built 13 ordering constraints for composite.
built 307 ordering constraints for composite.
built 538 ordering constraints for composite.
built 118 ordering constraints for composite.
built 590 ordering constraints for composite.
built 60 ordering constraints for composite.
terminate called after throwing an instance of 'std::bad_alloc'
what(): std::bad_alloc

BK_STOP 1527435563975

--------------------
content from stderr:

+ export BINDIR=/home/mcc/BenchKit/
+ BINDIR=/home/mcc/BenchKit/
++ pwd
+ export MODEL=/home/mcc/execution
+ MODEL=/home/mcc/execution
+ /home/mcc/BenchKit//runeclipse.sh /home/mcc/execution CTLFireability -its -ltsminpath /home/mcc/BenchKit//lts_install_dir/ -louvain -smt
+ ulimit -s 65536
+ [[ -z '' ]]
+ export LTSMIN_MEM_SIZE=8589934592
+ LTSMIN_MEM_SIZE=8589934592
+ /home/mcc/BenchKit//itstools/its-tools -consoleLog -data /home/mcc/execution/workspace -pnfolder /home/mcc/execution -examination CTLFireability -z3path /home/mcc/BenchKit//z3/bin/z3 -yices2path /home/mcc/BenchKit//yices/bin/yices -its -ltsminpath /home/mcc/BenchKit//lts_install_dir/ -louvain -smt -vmargs -Dosgi.locking=none -Declipse.stateSaveDelayInterval=-1 -Dosgi.configuration.area=/tmp/.eclipse -Xss8m -Xms40m -Xmx8192m -Dfile.encoding=UTF-8 -Dosgi.requiredJavaVersion=1.6
May 27, 2018 3:26:31 PM fr.lip6.move.gal.application.Application start
INFO: Running its-tools with arguments : [-pnfolder, /home/mcc/execution, -examination, CTLFireability, -z3path, /home/mcc/BenchKit//z3/bin/z3, -yices2path, /home/mcc/BenchKit//yices/bin/yices, -its, -ltsminpath, /home/mcc/BenchKit//lts_install_dir/, -louvain, -smt]
May 27, 2018 3:26:31 PM fr.lip6.move.gal.application.MccTranslator transformPNML
INFO: Parsing pnml file : /home/mcc/execution/model.pnml
May 27, 2018 3:26:32 PM fr.lip6.move.gal.nupn.PTNetReader loadFromXML
INFO: Load time of PNML (sax parser for PT used): 429 ms
May 27, 2018 3:26:32 PM fr.lip6.move.gal.pnml.togal.PTGALTransformer handlePage
INFO: Transformed 618 places.
May 27, 2018 3:26:32 PM fr.lip6.move.gal.pnml.togal.PTGALTransformer handlePage
INFO: Transformed 3190 transitions.
May 27, 2018 3:26:33 PM fr.lip6.move.gal.application.MccTranslator applyOrder
INFO: Applying decomposition
May 27, 2018 3:26:34 PM fr.lip6.move.gal.instantiate.GALRewriter flatten
INFO: Flatten gal took : 1273 ms
May 27, 2018 3:26:34 PM fr.lip6.move.gal.instantiate.GALRewriter flatten
INFO: Flatten gal took : 584 ms
Begin: Sun May 27 15:26:35 2018

Computation of communities with the Newman-Girvan Modularity quality function

level 0:
start computation: Sun May 27 15:26:35 2018
network size: 618 nodes, 5886 links, 6380 weight
quality increased from -0.0221503 to 0.390294
end computation: Sun May 27 15:26:35 2018
level 1:
start computation: Sun May 27 15:26:35 2018
network size: 126 nodes, 1508 links, 6380 weight
quality increased from 0.390294 to 0.4445
end computation: Sun May 27 15:26:35 2018
level 2:
start computation: Sun May 27 15:26:35 2018
network size: 18 nodes, 134 links, 6380 weight
quality increased from 0.4445 to 0.44997
end computation: Sun May 27 15:26:35 2018
level 3:
start computation: Sun May 27 15:26:35 2018
network size: 5 nodes, 23 links, 6380 weight
quality increased from 0.44997 to 0.44997
end computation: Sun May 27 15:26:35 2018
End: Sun May 27 15:26:35 2018
Total duration: 0 sec
0.44997
May 27, 2018 3:26:36 PM fr.lip6.move.gal.instantiate.CompositeBuilder decomposeWithOrder
INFO: Decomposing Gal with order
May 27, 2018 3:26:36 PM fr.lip6.move.gal.instantiate.GALRewriter flatten
INFO: Flatten gal took : 761 ms
May 27, 2018 3:26:36 PM fr.lip6.move.gal.instantiate.CompositeBuilder rewriteArraysToAllowPartition
INFO: Rewriting arrays to variables to allow decomposition.
May 27, 2018 3:26:38 PM fr.lip6.move.gal.instantiate.Instantiator fuseIsomorphicEffects
INFO: Removed a total of 1536 redundant transitions.
May 27, 2018 3:26:39 PM fr.lip6.move.serialization.SerializationUtil systemToFile
INFO: Time to serialize gal into /home/mcc/execution/CTLFireability.pnml.gal : 85 ms
May 27, 2018 3:26:39 PM fr.lip6.move.serialization.SerializationUtil serializePropertiesForITSCTLTools
INFO: Time to serialize properties into /home/mcc/execution/CTLFireability.ctl : 13 ms
ITS-tools command line returned an error code 134

Sequence of Actions to be Executed by the VM

This is useful if one wants to reexecute the tool in the VM from the submitted image disk.

set -x
# this is for BenchKit: configuration of major elements for the test
export BK_INPUT="PolyORBLF-PT-S04J06T06"
export BK_EXAMINATION="CTLFireability"
export BK_TOOL="itstoolsl"
export BK_RESULT_DIR="/tmp/BK_RESULTS/OUTPUTS"
export BK_TIME_CONFINEMENT="3600"
export BK_MEMORY_CONFINEMENT="16384"

# this is specific to your benchmark or test

export BIN_DIR="$HOME/BenchKit/bin"

# remove the execution directoty if it exists (to avoid increse of .vmdk images)
if [ -d execution ] ; then
rm -rf execution
fi

tar xzf /home/mcc/BenchKit/INPUTS/PolyORBLF-PT-S04J06T06.tgz
mv PolyORBLF-PT-S04J06T06 execution
cd execution
pwd
ls -lh

# this is for BenchKit: explicit launching of the test
echo "====================================================================="
echo " Generated by BenchKit 2-3637"
echo " Executing tool itstoolsl"
echo " Input is PolyORBLF-PT-S04J06T06, examination is CTLFireability"
echo " Time confinement is $BK_TIME_CONFINEMENT seconds"
echo " Memory confinement is 16384 MBytes"
echo " Number of cores is 4"
echo " Run identifier is r129-smll-152673531500200"
echo "====================================================================="
echo
echo "--------------------"
echo "content from stdout:"
echo
echo "=== Data for post analysis generated by BenchKit (invocation template)"
echo
if [ "CTLFireability" = "UpperBounds" ] ; then
echo "The expected result is a vector of positive values"
echo NUM_VECTOR
elif [ "CTLFireability" != "StateSpace" ] ; then
echo "The expected result is a vector of booleans"
echo BOOL_VECTOR
else
echo "no data necessary for post analysis"
fi
echo
if [ -f "CTLFireability.txt" ] ; then
echo "here is the order used to build the result vector(from text file)"
for x in $(grep Property CTLFireability.txt | cut -d ' ' -f 2 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ -f "CTLFireability.xml" ] ; then # for cunf (txt files deleted;-)
echo echo "here is the order used to build the result vector(from xml file)"
for x in $(grep '' CTLFireability.xml | cut -d '>' -f 2 | cut -d '<' -f 1 | sort -u) ; do
echo "FORMULA_NAME $x"
done
fi
echo
echo "=== Now, execution of the tool begins"
echo
echo -n "BK_START "
date -u +%s%3N
echo
timeout -s 9 $BK_TIME_CONFINEMENT bash -c "/home/mcc/BenchKit/BenchKit_head.sh 2> STDERR ; echo ; echo -n \"BK_STOP \" ; date -u +%s%3N"
if [ $? -eq 137 ] ; then
echo
echo "BK_TIME_CONFINEMENT_REACHED"
fi
echo
echo "--------------------"
echo "content from stderr:"
echo
cat STDERR ;