Execution Chart

We display below the execution chart for this examination (boot time has been removed).

Trace from the execution

Waiting for the VM to be ready (probing ssh)
....................
/home/mcc/execution
total 196K
-rw-r--r-- 1 mcc users 4.2K May 15 18:54 CTLCardinality.txt
-rw-r--r-- 1 mcc users 24K May 15 18:54 CTLCardinality.xml
-rw-r--r-- 1 mcc users 2.2K May 15 18:54 CTLFireability.txt
-rw-r--r-- 1 mcc users 15K May 15 18:54 CTLFireability.xml
-rw-r--r-- 1 mcc users 4.0K May 15 18:50 GenericPropertiesDefinition.xml
-rw-r--r-- 1 mcc users 5.9K May 15 18:50 GenericPropertiesVerdict.xml
-rw-r--r-- 1 mcc users 2.2K May 15 18:54 LTLCardinality.txt
-rw-r--r-- 1 mcc users 9.2K May 15 18:54 LTLCardinality.xml
-rw-r--r-- 1 mcc users 1.7K May 15 18:54 LTLFireability.txt
-rw-r--r-- 1 mcc users 7.6K May 15 18:54 LTLFireability.xml
-rw-r--r-- 1 mcc users 3.9K May 15 18:54 ReachabilityCardinality.txt
-rw-r--r-- 1 mcc users 20K May 15 18:54 ReachabilityCardinality.xml
-rw-r--r-- 1 mcc users 102 May 15 18:54 ReachabilityDeadlock.txt
-rw-r--r-- 1 mcc users 340 May 15 18:54 ReachabilityDeadlock.xml
-rw-r--r-- 1 mcc users 2.6K May 15 18:54 ReachabilityFireability.txt
-rw-r--r-- 1 mcc users 18K May 15 18:54 ReachabilityFireability.xml
-rw-r--r-- 1 mcc users 1.6K May 15 18:54 UpperBounds.txt
-rw-r--r-- 1 mcc users 3.6K May 15 18:54 UpperBounds.xml
-rw-r--r-- 1 mcc users 6 May 15 18:50 equiv_col
-rw-r--r-- 1 mcc users 4 May 15 18:50 instance
-rw-r--r-- 1 mcc users 6 May 15 18:50 iscolored
-rw-r--r-- 1 mcc users 25K May 15 18:50 model.pnml
=====================================================================
Generated by BenchKit 2-3637
Executing tool mcc4mcc-full
Input is MAPK-PT-320, examination is CTLFireability
Time confinement is 3600 seconds
Memory confinement is 16384 MBytes
Number of cores is 4
Run identifier is r118-csrt-152666478100193
=====================================================================

--------------------
content from stdout:

=== Data for post analysis generated by BenchKit (invocation template)

The expected result is a vector of booleans
BOOL_VECTOR

here is the order used to build the result vector(from text file)
FORMULA_NAME MAPK-PT-320-CTLFireability-00
FORMULA_NAME MAPK-PT-320-CTLFireability-01
FORMULA_NAME MAPK-PT-320-CTLFireability-02
FORMULA_NAME MAPK-PT-320-CTLFireability-03
FORMULA_NAME MAPK-PT-320-CTLFireability-04
FORMULA_NAME MAPK-PT-320-CTLFireability-05
FORMULA_NAME MAPK-PT-320-CTLFireability-06
FORMULA_NAME MAPK-PT-320-CTLFireability-07
FORMULA_NAME MAPK-PT-320-CTLFireability-08
FORMULA_NAME MAPK-PT-320-CTLFireability-09
FORMULA_NAME MAPK-PT-320-CTLFireability-10
FORMULA_NAME MAPK-PT-320-CTLFireability-11
FORMULA_NAME MAPK-PT-320-CTLFireability-12
FORMULA_NAME MAPK-PT-320-CTLFireability-13
FORMULA_NAME MAPK-PT-320-CTLFireability-14
FORMULA_NAME MAPK-PT-320-CTLFireability-15

=== Now, execution of the tool begins

BK_START 1527290944376


BK_STOP 1527292110366

--------------------
content from stderr:

Prefix is 65b80f64.
Reading known information in /usr/share/mcc4mcc/65b80f64-known.json.
Reading learned information in /usr/share/mcc4mcc/65b80f64-learned.json.
Reading value translations in /usr/share/mcc4mcc/65b80f64-values.json.
Using directory /home/mcc/execution for input, as it contains a model.pnml file.
Using MAPK-PT-320 as instance name.
Using MAPK as model name.
Using algorithm or tool voting-classifier.
Model characteristics are: {'Examination': 'CTLFireability', 'Place/Transition': True, 'Colored': False, 'Relative-Time': 1, 'Relative-Memory': 1, 'Ordinary': True, 'Simple Free Choice': False, 'Extended Free Choice': False, 'State Machine': False, 'Marked Graph': False, 'Connected': True, 'Strongly Connected': True, 'Source Place': False, 'Sink Place': False, 'Source Transition': False, 'Sink Transition': False, 'Loop Free': True, 'Conservative': False, 'Sub-Conservative': False, 'Nested Units': False, 'Safe': False, 'Deadlock': None, 'Reversible': None, 'Quasi Live': True, 'Live': None}.
/usr/local/lib/python3.6/dist-packages/sklearn/preprocessing/label.py:151: DeprecationWarning: The truth value of an empty array is ambiguous. Returning False, but in future this will result in an error. Use `array.size > 0` to check that an array is not empty.
if diff:
Known tools are: [{'Time': 828283, 'Memory': 15942.39, 'Tool': 'lola'}, {'Time': 852092, 'Memory': 15937.97, 'Tool': 'lola'}].
Learned tools are: [{'Tool': 'itstools'}].
CTLFireability itstools MAPK-PT-320...
May 25, 2018 11:29:12 PM fr.lip6.move.gal.application.Application start
INFO: Running its-tools with arguments : [-z3path, /usr/bin/z3, -yices2path, /usr/bin/yices, -ltsminpath, /usr/bin, -smt, -its, -pnfolder, /mcc-data, -examination, CTLFireability]
May 25, 2018 11:29:12 PM fr.lip6.move.gal.application.MccTranslator transformPNML
INFO: Parsing pnml file : /mcc-data/model.pnml
May 25, 2018 11:29:12 PM fr.lip6.move.gal.nupn.PTNetReader loadFromXML
INFO: Load time of PNML (sax parser for PT used): 47 ms
May 25, 2018 11:29:12 PM fr.lip6.move.gal.pnml.togal.PTGALTransformer handlePage
INFO: Transformed 22 places.
May 25, 2018 11:29:12 PM fr.lip6.move.gal.pnml.togal.PTGALTransformer handlePage
INFO: Transformed 30 transitions.
May 25, 2018 11:29:12 PM fr.lip6.move.serialization.SerializationUtil systemToFile
INFO: Time to serialize gal into /mcc-data/model.pnml.img.gal : 5 ms
May 25, 2018 11:29:12 PM fr.lip6.move.gal.instantiate.GALRewriter flatten
INFO: Flatten gal took : 25 ms
May 25, 2018 11:29:12 PM fr.lip6.move.serialization.SerializationUtil systemToFile
INFO: Time to serialize gal into /mcc-data/CTLFireability.pnml.gal : 2 ms
May 25, 2018 11:29:12 PM fr.lip6.move.serialization.SerializationUtil serializePropertiesForITSCTLTools
INFO: Time to serialize properties into /mcc-data/CTLFireability.ctl : 2 ms
Invoking ITS tools like this :CommandLine [args=[/usr/share/itscl/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.201804131302/bin/its-ctl-linux64, --gc-threshold, 2000000, --quiet, -i, /mcc-data/CTLFireability.pnml.gal, -t, CGAL, -ctl, /mcc-data/CTLFireability.ctl], workingDir=/mcc-data]

its-ctl command run as :

/usr/share/itscl/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.201804131302/bin/its-ctl-linux64 --gc-threshold 2000000 --quiet -i /mcc-data/CTLFireability.pnml.gal -t CGAL -ctl /mcc-data/CTLFireability.ctl
No direction supplied, using forward translation only.
Parsed 16 CTL formulae.
ITS-tools command line returned an error code 137

Sequence of Actions to be Executed by the VM

This is useful if one wants to reexecute the tool in the VM from the submitted image disk.

set -x
# this is for BenchKit: configuration of major elements for the test
export BK_INPUT="MAPK-PT-320"
export BK_EXAMINATION="CTLFireability"
export BK_TOOL="mcc4mcc-full"
export BK_RESULT_DIR="/tmp/BK_RESULTS/OUTPUTS"
export BK_TIME_CONFINEMENT="3600"
export BK_MEMORY_CONFINEMENT="16384"

# this is specific to your benchmark or test

export BIN_DIR="$HOME/BenchKit/bin"

# remove the execution directoty if it exists (to avoid increse of .vmdk images)
if [ -d execution ] ; then
rm -rf execution
fi

tar xzf /home/mcc/BenchKit/INPUTS/MAPK-PT-320.tgz
mv MAPK-PT-320 execution
cd execution
pwd
ls -lh

# this is for BenchKit: explicit launching of the test
echo "====================================================================="
echo " Generated by BenchKit 2-3637"
echo " Executing tool mcc4mcc-full"
echo " Input is MAPK-PT-320, examination is CTLFireability"
echo " Time confinement is $BK_TIME_CONFINEMENT seconds"
echo " Memory confinement is 16384 MBytes"
echo " Number of cores is 4"
echo " Run identifier is r118-csrt-152666478100193"
echo "====================================================================="
echo
echo "--------------------"
echo "content from stdout:"
echo
echo "=== Data for post analysis generated by BenchKit (invocation template)"
echo
if [ "CTLFireability" = "UpperBounds" ] ; then
echo "The expected result is a vector of positive values"
echo NUM_VECTOR
elif [ "CTLFireability" != "StateSpace" ] ; then
echo "The expected result is a vector of booleans"
echo BOOL_VECTOR
else
echo "no data necessary for post analysis"
fi
echo
if [ -f "CTLFireability.txt" ] ; then
echo "here is the order used to build the result vector(from text file)"
for x in $(grep Property CTLFireability.txt | cut -d ' ' -f 2 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ -f "CTLFireability.xml" ] ; then # for cunf (txt files deleted;-)
echo echo "here is the order used to build the result vector(from xml file)"
for x in $(grep '' CTLFireability.xml | cut -d '>' -f 2 | cut -d '<' -f 1 | sort -u) ; do
echo "FORMULA_NAME $x"
done
fi
echo
echo "=== Now, execution of the tool begins"
echo
echo -n "BK_START "
date -u +%s%3N
echo
timeout -s 9 $BK_TIME_CONFINEMENT bash -c "/home/mcc/BenchKit/BenchKit_head.sh 2> STDERR ; echo ; echo -n \"BK_STOP \" ; date -u +%s%3N"
if [ $? -eq 137 ] ; then
echo
echo "BK_TIME_CONFINEMENT_REACHED"
fi
echo
echo "--------------------"
echo "content from stderr:"
echo
cat STDERR ;