Execution Chart

We display below the execution chart for this examination (boot time has been removed).

Trace from the execution

Waiting for the VM to be ready (probing ssh)
........................................
/home/mcc/execution
total 4.7M
-rw-r--r-- 1 mcc users 116K May 15 18:54 CTLCardinality.txt
-rw-r--r-- 1 mcc users 314K May 15 18:54 CTLCardinality.xml
-rw-r--r-- 1 mcc users 115K May 15 18:54 CTLFireability.txt
-rw-r--r-- 1 mcc users 387K May 15 18:54 CTLFireability.xml
-rw-r--r-- 1 mcc users 4.0K May 15 18:50 GenericPropertiesDefinition.xml
-rw-r--r-- 1 mcc users 6.0K May 15 18:50 GenericPropertiesVerdict.xml
-rw-r--r-- 1 mcc users 64K May 15 18:54 LTLCardinality.txt
-rw-r--r-- 1 mcc users 166K May 15 18:54 LTLCardinality.xml
-rw-r--r-- 1 mcc users 34K May 15 18:54 LTLFireability.txt
-rw-r--r-- 1 mcc users 115K May 15 18:54 LTLFireability.xml
-rw-r--r-- 1 mcc users 141K May 15 18:54 ReachabilityCardinality.txt
-rw-r--r-- 1 mcc users 368K May 15 18:54 ReachabilityCardinality.xml
-rw-r--r-- 1 mcc users 104 May 15 18:54 ReachabilityDeadlock.txt
-rw-r--r-- 1 mcc users 342 May 15 18:54 ReachabilityDeadlock.xml
-rw-r--r-- 1 mcc users 95K May 15 18:54 ReachabilityFireability.txt
-rw-r--r-- 1 mcc users 306K May 15 18:54 ReachabilityFireability.xml
-rw-r--r-- 1 mcc users 63K May 15 18:54 UpperBounds.txt
-rw-r--r-- 1 mcc users 126K May 15 18:54 UpperBounds.xml
-rw-r--r-- 1 mcc users 5 May 15 18:50 equiv_col
-rw-r--r-- 1 mcc users 2 May 15 18:50 instance
-rw-r--r-- 1 mcc users 6 May 15 18:50 iscolored
-rw-r--r-- 1 mcc users 2.3M May 15 18:50 model.pnml
=====================================================================
Generated by BenchKit 2-3637
Executing tool itstoolsl
Input is Peterson-PT-7, examination is StateSpace
Time confinement is 3600 seconds
Memory confinement is 16384 MBytes
Number of cores is 4
Run identifier is r117-csrt-152666477200589
=====================================================================

--------------------
content from stdout:

=== Data for post analysis generated by BenchKit (invocation template)

no data necessary for post analysis


=== Now, execution of the tool begins

BK_START 1527264895246

Converted graph to binary with : CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.louvain.binaries_1.0.0.201805241334/bin/convert-linux64, -i, /tmp/graph869565569546788135.txt, -o, /tmp/graph869565569546788135.bin, -w, /tmp/graph869565569546788135.weights], workingDir=null]
Built communities with : CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.louvain.binaries_1.0.0.201805241334/bin/louvain-linux64, /tmp/graph869565569546788135.bin, -l, -1, -v, -w, /tmp/graph869565569546788135.weights, -q, 0, -e, 0.001], workingDir=null]
Invoking ITS tools like this :CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.201805241334/bin/its-reach-linux64, --gc-threshold, 2000000, --quiet, -i, /home/mcc/execution/StateSpace.pnml.gal, -t, CGAL, --stats], workingDir=/home/mcc/execution]

its-reach command run as :

/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.201805241334/bin/its-reach-linux64 --gc-threshold 2000000 --quiet -i /home/mcc/execution/StateSpace.pnml.gal -t CGAL --stats
built 454 ordering constraints for composite.
built 15 ordering constraints for composite.
built 21 ordering constraints for composite.
built 18 ordering constraints for composite.
built 19 ordering constraints for composite.
built 18 ordering constraints for composite.
built 14 ordering constraints for composite.
built 16 ordering constraints for composite.
built 14 ordering constraints for composite.
built 14 ordering constraints for composite.
built 16 ordering constraints for composite.
built 20 ordering constraints for composite.
built 20 ordering constraints for composite.
built 14 ordering constraints for composite.
built 15 ordering constraints for composite.
built 271 ordering constraints for composite.
built 11 ordering constraints for composite.
built 19 ordering constraints for composite.
built 16 ordering constraints for composite.
built 17 ordering constraints for composite.
built 154 ordering constraints for composite.
built 81 ordering constraints for composite.
built 267 ordering constraints for composite.
built 78 ordering constraints for composite.
built 210 ordering constraints for composite.
built 339 ordering constraints for composite.
built 349 ordering constraints for composite.
built 20 ordering constraints for composite.
built 14 ordering constraints for composite.
built 18 ordering constraints for composite.
built 18 ordering constraints for composite.
built 270 ordering constraints for composite.
built 233 ordering constraints for composite.
built 18 ordering constraints for composite.
built 20 ordering constraints for composite.
built 19 ordering constraints for composite.
built 17 ordering constraints for composite.
built 19 ordering constraints for composite.
built 19 ordering constraints for composite.
built 19 ordering constraints for composite.
built 11 ordering constraints for composite.
built 19 ordering constraints for composite.
built 20 ordering constraints for composite.
built 19 ordering constraints for composite.
built 228 ordering constraints for composite.
built 18 ordering constraints for composite.
built 17 ordering constraints for composite.

BK_STOP 1527265449582

--------------------
content from stderr:

+ export BINDIR=/home/mcc/BenchKit/
+ BINDIR=/home/mcc/BenchKit/
++ pwd
+ export MODEL=/home/mcc/execution
+ MODEL=/home/mcc/execution
+ /home/mcc/BenchKit//runeclipse.sh /home/mcc/execution StateSpace -its -ltsminpath /home/mcc/BenchKit//lts_install_dir/ -louvain -smt
+ ulimit -s 65536
+ [[ -z '' ]]
+ export LTSMIN_MEM_SIZE=8589934592
+ LTSMIN_MEM_SIZE=8589934592
+ /home/mcc/BenchKit//itstools/its-tools -consoleLog -data /home/mcc/execution/workspace -pnfolder /home/mcc/execution -examination StateSpace -z3path /home/mcc/BenchKit//z3/bin/z3 -yices2path /home/mcc/BenchKit//yices/bin/yices -its -ltsminpath /home/mcc/BenchKit//lts_install_dir/ -louvain -smt -vmargs -Dosgi.locking=none -Declipse.stateSaveDelayInterval=-1 -Dosgi.configuration.area=/tmp/.eclipse -Xss8m -Xms40m -Xmx8192m -Dfile.encoding=UTF-8 -Dosgi.requiredJavaVersion=1.6
May 25, 2018 4:14:57 PM fr.lip6.move.gal.application.Application start
INFO: Running its-tools with arguments : [-pnfolder, /home/mcc/execution, -examination, StateSpace, -z3path, /home/mcc/BenchKit//z3/bin/z3, -yices2path, /home/mcc/BenchKit//yices/bin/yices, -its, -ltsminpath, /home/mcc/BenchKit//lts_install_dir/, -louvain, -smt]
May 25, 2018 4:14:57 PM fr.lip6.move.gal.application.MccTranslator transformPNML
INFO: Parsing pnml file : /home/mcc/execution/model.pnml
May 25, 2018 4:14:57 PM fr.lip6.move.gal.nupn.PTNetReader loadFromXML
INFO: Load time of PNML (sax parser for PT used): 268 ms
May 25, 2018 4:14:57 PM fr.lip6.move.gal.pnml.togal.PTGALTransformer handlePage
INFO: Transformed 1992 places.
May 25, 2018 4:14:57 PM fr.lip6.move.gal.pnml.togal.PTGALTransformer handlePage
INFO: Transformed 3096 transitions.
May 25, 2018 4:14:57 PM fr.lip6.move.gal.application.MccTranslator applyOrder
INFO: Applying decomposition
May 25, 2018 4:14:58 PM fr.lip6.move.gal.instantiate.GALRewriter flatten
INFO: Flatten gal took : 777 ms
May 25, 2018 4:14:59 PM fr.lip6.move.gal.instantiate.GALRewriter flatten
INFO: Flatten gal took : 310 ms
Begin: Fri May 25 16:14:59 2018

Computation of communities with the Newman-Girvan Modularity quality function

level 0:
start computation: Fri May 25 16:14:59 2018
network size: 1992 nodes, 8664 links, 6192 weight
quality increased from -0.00115104 to 0.491152
end computation: Fri May 25 16:14:59 2018
level 1:
start computation: Fri May 25 16:14:59 2018
network size: 733 nodes, 4788 links, 6192 weight
quality increased from 0.491152 to 0.724619
end computation: Fri May 25 16:14:59 2018
level 2:
start computation: Fri May 25 16:14:59 2018
network size: 261 nodes, 1903 links, 6192 weight
quality increased from 0.724619 to 0.748642
end computation: Fri May 25 16:14:59 2018
level 3:
start computation: Fri May 25 16:14:59 2018
network size: 104 nodes, 1114 links, 6192 weight
quality increased from 0.748642 to 0.752441
end computation: Fri May 25 16:14:59 2018
level 4:
start computation: Fri May 25 16:14:59 2018
network size: 46 nodes, 486 links, 6192 weight
quality increased from 0.752441 to 0.75551
end computation: Fri May 25 16:14:59 2018
End: Fri May 25 16:14:59 2018
Total duration: 0 sec
0.75551
May 25, 2018 4:14:59 PM fr.lip6.move.gal.instantiate.CompositeBuilder decomposeWithOrder
INFO: Decomposing Gal with order
May 25, 2018 4:14:59 PM fr.lip6.move.gal.instantiate.GALRewriter flatten
INFO: Flatten gal took : 221 ms
May 25, 2018 4:15:00 PM fr.lip6.move.gal.instantiate.CompositeBuilder rewriteArraysToAllowPartition
INFO: Rewriting arrays to variables to allow decomposition.
May 25, 2018 4:15:01 PM fr.lip6.move.gal.instantiate.Instantiator fuseIsomorphicEffects
INFO: Removed a total of 2827 redundant transitions.
May 25, 2018 4:15:01 PM fr.lip6.move.serialization.SerializationUtil systemToFile
INFO: Time to serialize gal into /home/mcc/execution/StateSpace.pnml.gal : 61 ms
ITS-tools command line returned an error code 137

Sequence of Actions to be Executed by the VM

This is useful if one wants to reexecute the tool in the VM from the submitted image disk.

set -x
# this is for BenchKit: configuration of major elements for the test
export BK_INPUT="Peterson-PT-7"
export BK_EXAMINATION="StateSpace"
export BK_TOOL="itstoolsl"
export BK_RESULT_DIR="/tmp/BK_RESULTS/OUTPUTS"
export BK_TIME_CONFINEMENT="3600"
export BK_MEMORY_CONFINEMENT="16384"

# this is specific to your benchmark or test

export BIN_DIR="$HOME/BenchKit/bin"

# remove the execution directoty if it exists (to avoid increse of .vmdk images)
if [ -d execution ] ; then
rm -rf execution
fi

tar xzf /home/mcc/BenchKit/INPUTS/Peterson-PT-7.tgz
mv Peterson-PT-7 execution
cd execution
pwd
ls -lh

# this is for BenchKit: explicit launching of the test
echo "====================================================================="
echo " Generated by BenchKit 2-3637"
echo " Executing tool itstoolsl"
echo " Input is Peterson-PT-7, examination is StateSpace"
echo " Time confinement is $BK_TIME_CONFINEMENT seconds"
echo " Memory confinement is 16384 MBytes"
echo " Number of cores is 4"
echo " Run identifier is r117-csrt-152666477200589"
echo "====================================================================="
echo
echo "--------------------"
echo "content from stdout:"
echo
echo "=== Data for post analysis generated by BenchKit (invocation template)"
echo
if [ "StateSpace" = "UpperBounds" ] ; then
echo "The expected result is a vector of positive values"
echo NUM_VECTOR
elif [ "StateSpace" != "StateSpace" ] ; then
echo "The expected result is a vector of booleans"
echo BOOL_VECTOR
else
echo "no data necessary for post analysis"
fi
echo
if [ -f "StateSpace.txt" ] ; then
echo "here is the order used to build the result vector(from text file)"
for x in $(grep Property StateSpace.txt | cut -d ' ' -f 2 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ -f "StateSpace.xml" ] ; then # for cunf (txt files deleted;-)
echo echo "here is the order used to build the result vector(from xml file)"
for x in $(grep '' StateSpace.xml | cut -d '>' -f 2 | cut -d '<' -f 1 | sort -u) ; do
echo "FORMULA_NAME $x"
done
fi
echo
echo "=== Now, execution of the tool begins"
echo
echo -n "BK_START "
date -u +%s%3N
echo
timeout -s 9 $BK_TIME_CONFINEMENT bash -c "/home/mcc/BenchKit/BenchKit_head.sh 2> STDERR ; echo ; echo -n \"BK_STOP \" ; date -u +%s%3N"
if [ $? -eq 137 ] ; then
echo
echo "BK_TIME_CONFINEMENT_REACHED"
fi
echo
echo "--------------------"
echo "content from stderr:"
echo
cat STDERR ;