Execution Chart

We display below the execution chart for this examination (boot time has been removed).

Trace from the execution

Waiting for the VM to be ready (probing ssh)
......................
/home/mcc/execution
total 644K
-rw-r--r-- 1 mcc users 3.8K May 15 18:54 CTLCardinality.txt
-rw-r--r-- 1 mcc users 19K May 15 18:54 CTLCardinality.xml
-rw-r--r-- 1 mcc users 3.6K May 15 18:54 CTLFireability.txt
-rw-r--r-- 1 mcc users 19K May 15 18:54 CTLFireability.xml
-rw-r--r-- 1 mcc users 4.0K May 15 18:50 GenericPropertiesDefinition.xml
-rw-r--r-- 1 mcc users 6.1K May 15 18:50 GenericPropertiesVerdict.xml
-rw-r--r-- 1 mcc users 2.7K May 15 18:54 LTLCardinality.txt
-rw-r--r-- 1 mcc users 11K May 15 18:54 LTLCardinality.xml
-rw-r--r-- 1 mcc users 2.3K May 15 18:54 LTLFireability.txt
-rw-r--r-- 1 mcc users 8.5K May 15 18:54 LTLFireability.xml
-rw-r--r-- 1 mcc users 4.2K May 15 18:54 ReachabilityCardinality.txt
-rw-r--r-- 1 mcc users 20K May 15 18:54 ReachabilityCardinality.xml
-rw-r--r-- 1 mcc users 116 May 15 18:54 ReachabilityDeadlock.txt
-rw-r--r-- 1 mcc users 354 May 15 18:54 ReachabilityDeadlock.xml
-rw-r--r-- 1 mcc users 3.9K May 15 18:54 ReachabilityFireability.txt
-rw-r--r-- 1 mcc users 18K May 15 18:54 ReachabilityFireability.xml
-rw-r--r-- 1 mcc users 1.8K May 15 18:54 UpperBounds.txt
-rw-r--r-- 1 mcc users 3.9K May 15 18:54 UpperBounds.xml
-rw-r--r-- 1 mcc users 6 May 15 18:50 equiv_col
-rw-r--r-- 1 mcc users 10 May 15 18:50 instance
-rw-r--r-- 1 mcc users 6 May 15 18:50 iscolored
-rwxr-xr-x 1 mcc users 469K May 15 18:50 model.pnml
=====================================================================
Generated by BenchKit 2-3637
Executing tool itstoolsl
Input is NeighborGrid-PT-d4n3m2c23, examination is UpperBounds
Time confinement is 3600 seconds
Memory confinement is 16384 MBytes
Number of cores is 4
Run identifier is r117-csrt-152666476700226
=====================================================================

--------------------
content from stdout:

=== Data for post analysis generated by BenchKit (invocation template)

The expected result is a vector of positive values
NUM_VECTOR

here is the order used to build the result vector(from text file)
FORMULA_NAME NeighborGrid-PT-d4n3m2c23-UpperBounds-00
FORMULA_NAME NeighborGrid-PT-d4n3m2c23-UpperBounds-01
FORMULA_NAME NeighborGrid-PT-d4n3m2c23-UpperBounds-02
FORMULA_NAME NeighborGrid-PT-d4n3m2c23-UpperBounds-03
FORMULA_NAME NeighborGrid-PT-d4n3m2c23-UpperBounds-04
FORMULA_NAME NeighborGrid-PT-d4n3m2c23-UpperBounds-05
FORMULA_NAME NeighborGrid-PT-d4n3m2c23-UpperBounds-06
FORMULA_NAME NeighborGrid-PT-d4n3m2c23-UpperBounds-07
FORMULA_NAME NeighborGrid-PT-d4n3m2c23-UpperBounds-08
FORMULA_NAME NeighborGrid-PT-d4n3m2c23-UpperBounds-09
FORMULA_NAME NeighborGrid-PT-d4n3m2c23-UpperBounds-10
FORMULA_NAME NeighborGrid-PT-d4n3m2c23-UpperBounds-11
FORMULA_NAME NeighborGrid-PT-d4n3m2c23-UpperBounds-12
FORMULA_NAME NeighborGrid-PT-d4n3m2c23-UpperBounds-13
FORMULA_NAME NeighborGrid-PT-d4n3m2c23-UpperBounds-14
FORMULA_NAME NeighborGrid-PT-d4n3m2c23-UpperBounds-15

=== Now, execution of the tool begins

BK_START 1527247060281

Converted graph to binary with : CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.louvain.binaries_1.0.0.201805241334/bin/convert-linux64, -i, /tmp/graph1034465513627366228.txt, -o, /tmp/graph1034465513627366228.bin, -w, /tmp/graph1034465513627366228.weights], workingDir=null]
Built communities with : CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.louvain.binaries_1.0.0.201805241334/bin/louvain-linux64, /tmp/graph1034465513627366228.bin, -l, -1, -v, -w, /tmp/graph1034465513627366228.weights, -q, 0, -e, 0.001], workingDir=null]
Invoking ITS tools like this :CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.201805241334/bin/its-reach-linux64, --gc-threshold, 2000000, --quiet, -i, /home/mcc/execution/UpperBounds.pnml.gal, -t, CGAL, -reachable-file, UpperBounds.prop, --nowitness], workingDir=/home/mcc/execution]

its-reach command run as :

/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.201805241334/bin/its-reach-linux64 --gc-threshold 2000000 --quiet -i /home/mcc/execution/UpperBounds.pnml.gal -t CGAL -reachable-file UpperBounds.prop --nowitness
Loading property file UpperBounds.prop.
Read [bounds] property : NeighborGrid-PT-d4n3m2c23-UpperBounds-00 with value :u6.p_0_0_2_2
Read [bounds] property : NeighborGrid-PT-d4n3m2c23-UpperBounds-01 with value :i0.u7.p_2_2_0_1
Read [bounds] property : NeighborGrid-PT-d4n3m2c23-UpperBounds-02 with value :i4.u8.p_1_0_0_0
Read [bounds] property : NeighborGrid-PT-d4n3m2c23-UpperBounds-03 with value :i0.u3.p_2_2_0_2
Read [bounds] property : NeighborGrid-PT-d4n3m2c23-UpperBounds-04 with value :i4.u8.p_2_1_1_0
Read [bounds] property : NeighborGrid-PT-d4n3m2c23-UpperBounds-05 with value :i4.u5.p_1_0_1_0
Read [bounds] property : NeighborGrid-PT-d4n3m2c23-UpperBounds-06 with value :i0.u3.p_2_2_0_0
Read [bounds] property : NeighborGrid-PT-d4n3m2c23-UpperBounds-07 with value :i0.u3.p_0_2_0_0
Read [bounds] property : NeighborGrid-PT-d4n3m2c23-UpperBounds-08 with value :u6.p_0_0_2_2
Read [bounds] property : NeighborGrid-PT-d4n3m2c23-UpperBounds-09 with value :u0.p_1_1_0_2
Read [bounds] property : NeighborGrid-PT-d4n3m2c23-UpperBounds-10 with value :i0.u7.p_2_2_1_2
Read [bounds] property : NeighborGrid-PT-d4n3m2c23-UpperBounds-11 with value :i0.u3.p_2_1_0_1
Read [bounds] property : NeighborGrid-PT-d4n3m2c23-UpperBounds-12 with value :i0.u2.p_1_2_0_0
Read [bounds] property : NeighborGrid-PT-d4n3m2c23-UpperBounds-13 with value :i1.u1.p_2_2_2_0
Read [bounds] property : NeighborGrid-PT-d4n3m2c23-UpperBounds-14 with value :i4.u8.p_0_1_2_0
Read [bounds] property : NeighborGrid-PT-d4n3m2c23-UpperBounds-15 with value :u0.p_1_1_0_2
built 13 ordering constraints for composite.
built 546 ordering constraints for composite.
built 358 ordering constraints for composite.
built 438 ordering constraints for composite.

BK_STOP 1527248386183

--------------------
content from stderr:

+ export BINDIR=/home/mcc/BenchKit/
+ BINDIR=/home/mcc/BenchKit/
++ pwd
+ export MODEL=/home/mcc/execution
+ MODEL=/home/mcc/execution
+ /home/mcc/BenchKit//runeclipse.sh /home/mcc/execution UpperBounds -its -ltsminpath /home/mcc/BenchKit//lts_install_dir/ -louvain -smt
+ ulimit -s 65536
+ [[ -z '' ]]
+ export LTSMIN_MEM_SIZE=8589934592
+ LTSMIN_MEM_SIZE=8589934592
+ /home/mcc/BenchKit//itstools/its-tools -consoleLog -data /home/mcc/execution/workspace -pnfolder /home/mcc/execution -examination UpperBounds -z3path /home/mcc/BenchKit//z3/bin/z3 -yices2path /home/mcc/BenchKit//yices/bin/yices -its -ltsminpath /home/mcc/BenchKit//lts_install_dir/ -louvain -smt -vmargs -Dosgi.locking=none -Declipse.stateSaveDelayInterval=-1 -Dosgi.configuration.area=/tmp/.eclipse -Xss8m -Xms40m -Xmx8192m -Dfile.encoding=UTF-8 -Dosgi.requiredJavaVersion=1.6
May 25, 2018 11:17:43 AM fr.lip6.move.gal.application.Application start
INFO: Running its-tools with arguments : [-pnfolder, /home/mcc/execution, -examination, UpperBounds, -z3path, /home/mcc/BenchKit//z3/bin/z3, -yices2path, /home/mcc/BenchKit//yices/bin/yices, -its, -ltsminpath, /home/mcc/BenchKit//lts_install_dir/, -louvain, -smt]
May 25, 2018 11:17:43 AM fr.lip6.move.gal.application.MccTranslator transformPNML
INFO: Parsing pnml file : /home/mcc/execution/model.pnml
May 25, 2018 11:17:43 AM fr.lip6.move.gal.nupn.PTNetReader loadFromXML
INFO: Load time of PNML (sax parser for PT used): 130 ms
May 25, 2018 11:17:43 AM fr.lip6.move.gal.pnml.togal.PTGALTransformer handlePage
INFO: Transformed 81 places.
May 25, 2018 11:17:43 AM fr.lip6.move.gal.pnml.togal.PTGALTransformer handlePage
INFO: Transformed 1632 transitions.
May 25, 2018 11:17:43 AM fr.lip6.move.serialization.SerializationUtil systemToFile
INFO: Time to serialize gal into /home/mcc/execution/model.pnml.img.gal : 71 ms
May 25, 2018 11:17:43 AM fr.lip6.move.gal.application.MccTranslator applyOrder
INFO: Applying decomposition
May 25, 2018 11:17:44 AM fr.lip6.move.gal.instantiate.GALRewriter flatten
INFO: Flatten gal took : 273 ms
May 25, 2018 11:17:44 AM fr.lip6.move.gal.instantiate.GALRewriter flatten
INFO: Flatten gal took : 213 ms
Begin: Fri May 25 11:17:44 2018

Computation of communities with the Newman-Girvan Modularity quality function

level 0:
start computation: Fri May 25 11:17:44 2018
network size: 81 nodes, 1632 links, 3264 weight
quality increased from -0.014823 to 0.154039
end computation: Fri May 25 11:17:44 2018
level 1:
start computation: Fri May 25 11:17:44 2018
network size: 9 nodes, 77 links, 3264 weight
quality increased from 0.154039 to 0.16761
end computation: Fri May 25 11:17:44 2018
level 2:
start computation: Fri May 25 11:17:44 2018
network size: 5 nodes, 25 links, 3264 weight
quality increased from 0.16761 to 0.16761
end computation: Fri May 25 11:17:44 2018
End: Fri May 25 11:17:44 2018
Total duration: 0 sec
0.16761
May 25, 2018 11:17:44 AM fr.lip6.move.gal.instantiate.CompositeBuilder decomposeWithOrder
INFO: Decomposing Gal with order
May 25, 2018 11:17:45 AM fr.lip6.move.gal.instantiate.GALRewriter flatten
INFO: Flatten gal took : 138 ms
May 25, 2018 11:17:45 AM fr.lip6.move.gal.instantiate.CompositeBuilder rewriteArraysToAllowPartition
INFO: Rewriting arrays to variables to allow decomposition.
May 25, 2018 11:17:45 AM fr.lip6.move.gal.instantiate.Instantiator fuseIsomorphicEffects
INFO: Removed a total of 2114 redundant transitions.
May 25, 2018 11:17:45 AM fr.lip6.move.serialization.SerializationUtil systemToFile
INFO: Time to serialize gal into /home/mcc/execution/UpperBounds.pnml.gal : 21 ms
May 25, 2018 11:17:45 AM fr.lip6.move.serialization.SerializationUtil serializePropertiesForITSTools
INFO: Time to serialize properties into /home/mcc/execution/UpperBounds.prop : 1 ms
ITS-tools command line returned an error code 137

Sequence of Actions to be Executed by the VM

This is useful if one wants to reexecute the tool in the VM from the submitted image disk.

set -x
# this is for BenchKit: configuration of major elements for the test
export BK_INPUT="NeighborGrid-PT-d4n3m2c23"
export BK_EXAMINATION="UpperBounds"
export BK_TOOL="itstoolsl"
export BK_RESULT_DIR="/tmp/BK_RESULTS/OUTPUTS"
export BK_TIME_CONFINEMENT="3600"
export BK_MEMORY_CONFINEMENT="16384"

# this is specific to your benchmark or test

export BIN_DIR="$HOME/BenchKit/bin"

# remove the execution directoty if it exists (to avoid increse of .vmdk images)
if [ -d execution ] ; then
rm -rf execution
fi

tar xzf /home/mcc/BenchKit/INPUTS/NeighborGrid-PT-d4n3m2c23.tgz
mv NeighborGrid-PT-d4n3m2c23 execution
cd execution
pwd
ls -lh

# this is for BenchKit: explicit launching of the test
echo "====================================================================="
echo " Generated by BenchKit 2-3637"
echo " Executing tool itstoolsl"
echo " Input is NeighborGrid-PT-d4n3m2c23, examination is UpperBounds"
echo " Time confinement is $BK_TIME_CONFINEMENT seconds"
echo " Memory confinement is 16384 MBytes"
echo " Number of cores is 4"
echo " Run identifier is r117-csrt-152666476700226"
echo "====================================================================="
echo
echo "--------------------"
echo "content from stdout:"
echo
echo "=== Data for post analysis generated by BenchKit (invocation template)"
echo
if [ "UpperBounds" = "UpperBounds" ] ; then
echo "The expected result is a vector of positive values"
echo NUM_VECTOR
elif [ "UpperBounds" != "StateSpace" ] ; then
echo "The expected result is a vector of booleans"
echo BOOL_VECTOR
else
echo "no data necessary for post analysis"
fi
echo
if [ -f "UpperBounds.txt" ] ; then
echo "here is the order used to build the result vector(from text file)"
for x in $(grep Property UpperBounds.txt | cut -d ' ' -f 2 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ -f "UpperBounds.xml" ] ; then # for cunf (txt files deleted;-)
echo echo "here is the order used to build the result vector(from xml file)"
for x in $(grep '' UpperBounds.xml | cut -d '>' -f 2 | cut -d '<' -f 1 | sort -u) ; do
echo "FORMULA_NAME $x"
done
fi
echo
echo "=== Now, execution of the tool begins"
echo
echo -n "BK_START "
date -u +%s%3N
echo
timeout -s 9 $BK_TIME_CONFINEMENT bash -c "/home/mcc/BenchKit/BenchKit_head.sh 2> STDERR ; echo ; echo -n \"BK_STOP \" ; date -u +%s%3N"
if [ $? -eq 137 ] ; then
echo
echo "BK_TIME_CONFINEMENT_REACHED"
fi
echo
echo "--------------------"
echo "content from stderr:"
echo
cat STDERR ;