Execution Chart

We display below the execution chart for this examination (boot time has been removed).

Trace from the execution

Waiting for the VM to be ready (probing ssh)
...................
/home/mcc/execution
total 312K
-rw-r--r-- 1 mcc users 5.0K May 15 18:54 CTLCardinality.txt
-rw-r--r-- 1 mcc users 24K May 15 18:54 CTLCardinality.xml
-rw-r--r-- 1 mcc users 7.3K May 15 18:54 CTLFireability.txt
-rw-r--r-- 1 mcc users 36K May 15 18:54 CTLFireability.xml
-rw-r--r-- 1 mcc users 4.0K May 15 18:50 GenericPropertiesDefinition.xml
-rw-r--r-- 1 mcc users 6.3K May 15 18:50 GenericPropertiesVerdict.xml
-rw-r--r-- 1 mcc users 2.9K May 15 18:54 LTLCardinality.txt
-rw-r--r-- 1 mcc users 11K May 15 18:54 LTLCardinality.xml
-rw-r--r-- 1 mcc users 3.8K May 15 18:54 LTLFireability.txt
-rw-r--r-- 1 mcc users 17K May 15 18:54 LTLFireability.xml
-rw-r--r-- 1 mcc users 6.3K May 15 18:54 ReachabilityCardinality.txt
-rw-r--r-- 1 mcc users 28K May 15 18:54 ReachabilityCardinality.xml
-rw-r--r-- 1 mcc users 112 May 15 18:54 ReachabilityDeadlock.txt
-rw-r--r-- 1 mcc users 350 May 15 18:54 ReachabilityDeadlock.xml
-rw-r--r-- 1 mcc users 6.3K May 15 18:54 ReachabilityFireability.txt
-rw-r--r-- 1 mcc users 29K May 15 18:54 ReachabilityFireability.xml
-rw-r--r-- 1 mcc users 2.2K May 15 18:54 UpperBounds.txt
-rw-r--r-- 1 mcc users 5.1K May 15 18:54 UpperBounds.xml
-rw-r--r-- 1 mcc users 5 May 15 18:50 equiv_col
-rw-r--r-- 1 mcc users 2 May 15 18:50 instance
-rw-r--r-- 1 mcc users 6 May 15 18:50 iscolored
-rw-r--r-- 1 mcc users 75K May 15 18:50 model.pnml
=====================================================================
Generated by BenchKit 2-3637
Executing tool itstoolsl
Input is LamportFastMutEx-PT-3, examination is ReachabilityDeadlock
Time confinement is 3600 seconds
Memory confinement is 16384 MBytes
Number of cores is 4
Run identifier is r117-csrt-152666476500118
=====================================================================

--------------------
content from stdout:

=== Data for post analysis generated by BenchKit (invocation template)

The expected result is a vector of booleans
BOOL_VECTOR

here is the order used to build the result vector(from text file)
FORMULA_NAME LamportFastMutEx-PT-3-ReachabilityDeadlock-0

=== Now, execution of the tool begins

BK_START 1527242013473

Flatten gal took : 193 ms
Constant places removed 8 places and 4 transitions.
Iterating post reduction 0 with 8 rules applied. Total rules applied 8 place count 92 transition count 152
Symmetric choice reduction at 1 with 1 rule applications. Total rules 9 place count 92 transition count 152
Constant places removed 1 places and 4 transitions.
Performed 1 Post agglomeration using F-continuation condition.
Iterating post reduction 1 with 2 rules applied. Total rules applied 11 place count 91 transition count 147
Constant places removed 2 places and 4 transitions.
Iterating post reduction 2 with 2 rules applied. Total rules applied 13 place count 89 transition count 143
Constant places removed 9 places and 8 transitions.
Iterating post reduction 3 with 9 rules applied. Total rules applied 22 place count 80 transition count 135
Constant places removed 5 places and 8 transitions.
Iterating post reduction 4 with 5 rules applied. Total rules applied 27 place count 75 transition count 127
Constant places removed 2 places and 5 transitions.
Iterating post reduction 5 with 2 rules applied. Total rules applied 29 place count 73 transition count 122
Constant places removed 1 places and 4 transitions.
Iterating post reduction 6 with 1 rules applied. Total rules applied 30 place count 72 transition count 118
Constant places removed 1 places and 4 transitions.
Iterating post reduction 7 with 1 rules applied. Total rules applied 31 place count 71 transition count 114
Performed 3 Post agglomeration using F-continuation condition.
Constant places removed 3 places and 0 transitions.
Iterating post reduction 8 with 3 rules applied. Total rules applied 34 place count 68 transition count 111
Applied a total of 34 rules in 44 ms. Remains 68 /100 variables (removed 32) and now considering 111/156 (removed 45) transitions.
Normalized transition count is 93
// Phase 1: matrix 93 rows 68 cols
Using solver Z3 to compute partial order matrices.
Built C files in :
/home/mcc/execution
Converted graph to binary with : CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.louvain.binaries_1.0.0.201805241334/bin/convert-linux64, -i, /tmp/graph676863340681486956.txt, -o, /tmp/graph676863340681486956.bin, -w, /tmp/graph676863340681486956.weights], workingDir=null]
Built communities with : CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.louvain.binaries_1.0.0.201805241334/bin/louvain-linux64, /tmp/graph676863340681486956.bin, -l, -1, -v, -w, /tmp/graph676863340681486956.weights, -q, 0, -e, 0.001], workingDir=null]
Invoking ITS tools like this :CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.201805241334/bin/its-ctl-linux64, --gc-threshold, 2000000, --quiet, -i, /home/mcc/execution/ReachabilityDeadlock.pnml.gal, -t, CGAL, -ctl, DEADLOCK], workingDir=/home/mcc/execution]

its-ctl command run as :

/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.201805241334/bin/its-ctl-linux64 --gc-threshold 2000000 --quiet -i /home/mcc/execution/ReachabilityDeadlock.pnml.gal -t CGAL -ctl DEADLOCK
No direction supplied, using forward translation only.
built 22 ordering constraints for composite.
built 26 ordering constraints for composite.
built 31 ordering constraints for composite.
built 30 ordering constraints for composite.
built 29 ordering constraints for composite.
built 52 ordering constraints for composite.
Presburger conditions satisfied. Using coverability to approximate state space in K-Induction.
Normalized transition count is 93
// Phase 1: matrix 93 rows 68 cols
invariant :P_start_1_3 + P_setx_3_3 + P_setbi_5_3 + P_ify0_4_3 + P_sety_9_3 + P_ifxi_10_3 + P_setbi_11_3 + P_await_13_3 + P_ifyi_15_3 + P_awaity_3 + P_CS_21_3 + P_setbi_24_3 = 1
invariant :P_wait_1_2 + -1'P_await_13_1 + P_done_1_2 = 0
invariant :P_b_3_false + P_b_3_true = 1
invariant :P_wait_1_3 + -1'P_await_13_1 + P_done_1_3 = 0
invariant :P_start_1_2 + P_setx_3_2 + P_setbi_5_2 + P_ify0_4_2 + P_sety_9_2 + P_ifxi_10_2 + P_setbi_11_2 + P_await_13_2 + P_ifyi_15_2 + P_awaity_2 + P_CS_21_2 + P_setbi_24_2 = 1
invariant :P_start_1_1 + P_setx_3_1 + P_setbi_5_1 + P_ify0_4_1 + P_sety_9_1 + P_ifxi_10_1 + P_setbi_11_1 + P_await_13_1 + P_ifyi_15_1 + P_awaity_1 + P_CS_21_1 + P_setbi_24_1 = 1
invariant :P_wait_2_2 + -1'P_await_13_2 + P_done_2_2 = 0
invariant :P_wait_3_3 + -1'P_await_13_3 + P_done_3_3 = 0
invariant :P_wait_3_1 + -1'P_await_13_3 + P_done_3_1 = 0
invariant :P_b_2_false + P_b_2_true = 1
invariant :P_wait_2_1 + -1'P_await_13_2 + P_done_2_1 = 0
invariant :P_wait_3_2 + -1'P_await_13_3 + P_done_3_2 = 0
invariant :P_wait_1_1 + -1'P_await_13_1 + P_done_1_1 = 0
invariant :y_0 + y_1 + y_2 + y_3 = 1
invariant :P_b_1_false + P_b_1_true = 1
invariant :P_wait_2_3 + -1'P_await_13_2 + P_done_2_3 = 0
invariant :x_0 + x_1 + x_2 + x_3 = 1
Model ,|S| ,Time ,Mem(kb) ,fin. SDD ,fin. DDD ,peak SDD ,peak DDD ,SDD Hom ,SDD cache peak ,DDD Hom ,DDD cachepeak ,SHom cache
reachable,17255,0.252921,13044,590,71,14885,337,375,30421,73,1426,0


Model ,|S| ,Time ,Mem(kb) ,fin. SDD ,fin. DDD ,peak SDD ,peak DDD ,SDD Hom ,SDD cache peak ,DDD Hom ,DDD cachepeak ,SHom cache
dead,0,0.31268,13044,1,0,14885,566,1061,30421,279,2167,12454

System contains 0 deadlocks (shown below if less than --print-limit option) !
FORMULA LamportFastMutEx-PT-3-ReachabilityDeadlock-0 FALSE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL USE_NUPN
[ 0 ]
Running compilation step : CommandLine [args=[gcc, -c, -I/home/mcc/BenchKit//lts_install_dir//include, -I., -std=c99, -fPIC, -O3, model.c], workingDir=/home/mcc/execution]
WARNING : LTS min runner thread was asked to interrupt. Dying gracefully.

BK_STOP 1527242017355

--------------------
content from stderr:

+ export BINDIR=/home/mcc/BenchKit/
+ BINDIR=/home/mcc/BenchKit/
++ pwd
+ export MODEL=/home/mcc/execution
+ MODEL=/home/mcc/execution
+ /home/mcc/BenchKit//runeclipse.sh /home/mcc/execution ReachabilityDeadlock -its -ltsminpath /home/mcc/BenchKit//lts_install_dir/ -louvain -smt
+ ulimit -s 65536
+ [[ -z '' ]]
+ export LTSMIN_MEM_SIZE=8589934592
+ LTSMIN_MEM_SIZE=8589934592
+ /home/mcc/BenchKit//itstools/its-tools -consoleLog -data /home/mcc/execution/workspace -pnfolder /home/mcc/execution -examination ReachabilityDeadlock -z3path /home/mcc/BenchKit//z3/bin/z3 -yices2path /home/mcc/BenchKit//yices/bin/yices -its -ltsminpath /home/mcc/BenchKit//lts_install_dir/ -louvain -smt -vmargs -Dosgi.locking=none -Declipse.stateSaveDelayInterval=-1 -Dosgi.configuration.area=/tmp/.eclipse -Xss8m -Xms40m -Xmx8192m -Dfile.encoding=UTF-8 -Dosgi.requiredJavaVersion=1.6
May 25, 2018 9:53:35 AM fr.lip6.move.gal.application.Application start
INFO: Running its-tools with arguments : [-pnfolder, /home/mcc/execution, -examination, ReachabilityDeadlock, -z3path, /home/mcc/BenchKit//z3/bin/z3, -yices2path, /home/mcc/BenchKit//yices/bin/yices, -its, -ltsminpath, /home/mcc/BenchKit//lts_install_dir/, -louvain, -smt]
May 25, 2018 9:53:35 AM fr.lip6.move.gal.application.MccTranslator transformPNML
INFO: Parsing pnml file : /home/mcc/execution/model.pnml
May 25, 2018 9:53:35 AM fr.lip6.move.gal.nupn.PTNetReader loadFromXML
INFO: Load time of PNML (sax parser for PT used): 69 ms
May 25, 2018 9:53:35 AM fr.lip6.move.gal.pnml.togal.PTGALTransformer handlePage
INFO: Transformed 100 places.
May 25, 2018 9:53:35 AM fr.lip6.move.gal.pnml.togal.PTGALTransformer handlePage
INFO: Transformed 156 transitions.
May 25, 2018 9:53:35 AM fr.lip6.move.serialization.SerializationUtil systemToFile
INFO: Time to serialize gal into /home/mcc/execution/model.pnml.img.gal : 19 ms
May 25, 2018 9:53:36 AM fr.lip6.move.gal.instantiate.GALRewriter flatten
INFO: Flatten gal took : 176 ms
May 25, 2018 9:53:36 AM fr.lip6.move.serialization.SerializationUtil systemToFile
INFO: Time to serialize gal into /home/mcc/execution/model.pnml.simple.gal : 6 ms
May 25, 2018 9:53:36 AM fr.lip6.move.gal.semantics.DeterministicNextBuilder getDeterministicNext
INFO: Input system was already deterministic with 156 transitions.
May 25, 2018 9:53:36 AM fr.lip6.move.gal.application.MccTranslator applyOrder
INFO: Applying decomposition
May 25, 2018 9:53:36 AM fr.lip6.move.gal.instantiate.GALRewriter flatten
INFO: Flatten gal took : 24 ms
May 25, 2018 9:53:36 AM fr.lip6.move.gal.semantics.DeterministicNextBuilder getDeterministicNext
INFO: Input system was already deterministic with 111 transitions.
May 25, 2018 9:53:36 AM fr.lip6.move.gal.instantiate.GALRewriter flatten
INFO: Flatten gal took : 62 ms
Begin: Fri May 25 09:53:36 2018

Computation of communities with the Newman-Girvan Modularity quality function

level 0:
start computation: Fri May 25 09:53:36 2018
network size: 68 nodes, 480 links, 222 weight
quality increased from -0.0200303 to 0.338835
end computation: Fri May 25 09:53:36 2018
level 1:
start computation: Fri May 25 09:53:36 2018
network size: 23 nodes, 207 links, 222 weight
quality increased from 0.338835 to 0.450846
end computation: Fri May 25 09:53:36 2018
level 2:
start computation: Fri May 25 09:53:36 2018
network size: 6 nodes, 36 links, 222 weight
quality increased from 0.450846 to 0.450846
end computation: Fri May 25 09:53:36 2018
End: Fri May 25 09:53:36 2018
Total duration: 0 sec
0.450846
May 25, 2018 9:53:36 AM fr.lip6.move.gal.instantiate.CompositeBuilder decomposeWithOrder
INFO: Decomposing Gal with order
May 25, 2018 9:53:36 AM fr.lip6.move.gal.instantiate.GALRewriter flatten
INFO: Flatten gal took : 26 ms
May 25, 2018 9:53:36 AM fr.lip6.move.gal.instantiate.CompositeBuilder rewriteArraysToAllowPartition
INFO: Rewriting arrays to variables to allow decomposition.
May 25, 2018 9:53:36 AM fr.lip6.move.gal.instantiate.Instantiator fuseIsomorphicEffects
INFO: Removed a total of 131 redundant transitions.
May 25, 2018 9:53:36 AM fr.lip6.move.serialization.SerializationUtil systemToFile
INFO: Time to serialize gal into /home/mcc/execution/ReachabilityDeadlock.pnml.gal : 12 ms
May 25, 2018 9:53:36 AM fr.lip6.move.gal.gal2smt.bmc.KInductionSolver computeAndDeclareInvariants
INFO: Computed 17 place invariants in 28 ms
May 25, 2018 9:53:37 AM fr.lip6.move.gal.gal2smt.bmc.NextBMCSolver checkSat
WARNING: SMT solver unexpectedly returned 'unknown' answer, retrying.
Skipping mayMatrices nes/nds SMT solver raised an error :unknown
java.lang.RuntimeException: SMT solver raised an error :unknown
at fr.lip6.move.gal.gal2smt.bmc.NextBMCSolver.checkSat(NextBMCSolver.java:318)
at fr.lip6.move.gal.gal2smt.bmc.NextBMCSolver.checkSat(NextBMCSolver.java:305)
at fr.lip6.move.gal.gal2smt.bmc.KInductionSolver.init(KInductionSolver.java:116)
at fr.lip6.move.gal.gal2smt.bmc.NecessaryEnablingsolver.init(NecessaryEnablingsolver.java:71)
at fr.lip6.move.gal.gal2pins.Gal2PinsTransformerNext.printLabels(Gal2PinsTransformerNext.java:471)
at fr.lip6.move.gal.gal2pins.Gal2PinsTransformerNext.printDependencyMatrix(Gal2PinsTransformerNext.java:209)
at fr.lip6.move.gal.gal2pins.Gal2PinsTransformerNext.buildBodyFile(Gal2PinsTransformerNext.java:85)
at fr.lip6.move.gal.gal2pins.Gal2PinsTransformerNext.transform(Gal2PinsTransformerNext.java:830)
at fr.lip6.move.gal.application.LTSminRunner$1.run(LTSminRunner.java:71)
at java.lang.Thread.run(Thread.java:748)
May 25, 2018 9:53:37 AM fr.lip6.move.gal.gal2pins.Gal2PinsTransformerNext transform
INFO: Built C files in 650ms conformant to PINS in folder :/home/mcc/execution

Sequence of Actions to be Executed by the VM

This is useful if one wants to reexecute the tool in the VM from the submitted image disk.

set -x
# this is for BenchKit: configuration of major elements for the test
export BK_INPUT="LamportFastMutEx-PT-3"
export BK_EXAMINATION="ReachabilityDeadlock"
export BK_TOOL="itstoolsl"
export BK_RESULT_DIR="/tmp/BK_RESULTS/OUTPUTS"
export BK_TIME_CONFINEMENT="3600"
export BK_MEMORY_CONFINEMENT="16384"

# this is specific to your benchmark or test

export BIN_DIR="$HOME/BenchKit/bin"

# remove the execution directoty if it exists (to avoid increse of .vmdk images)
if [ -d execution ] ; then
rm -rf execution
fi

tar xzf /home/mcc/BenchKit/INPUTS/LamportFastMutEx-PT-3.tgz
mv LamportFastMutEx-PT-3 execution
cd execution
pwd
ls -lh

# this is for BenchKit: explicit launching of the test
echo "====================================================================="
echo " Generated by BenchKit 2-3637"
echo " Executing tool itstoolsl"
echo " Input is LamportFastMutEx-PT-3, examination is ReachabilityDeadlock"
echo " Time confinement is $BK_TIME_CONFINEMENT seconds"
echo " Memory confinement is 16384 MBytes"
echo " Number of cores is 4"
echo " Run identifier is r117-csrt-152666476500118"
echo "====================================================================="
echo
echo "--------------------"
echo "content from stdout:"
echo
echo "=== Data for post analysis generated by BenchKit (invocation template)"
echo
if [ "ReachabilityDeadlock" = "UpperBounds" ] ; then
echo "The expected result is a vector of positive values"
echo NUM_VECTOR
elif [ "ReachabilityDeadlock" != "StateSpace" ] ; then
echo "The expected result is a vector of booleans"
echo BOOL_VECTOR
else
echo "no data necessary for post analysis"
fi
echo
if [ -f "ReachabilityDeadlock.txt" ] ; then
echo "here is the order used to build the result vector(from text file)"
for x in $(grep Property ReachabilityDeadlock.txt | cut -d ' ' -f 2 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ -f "ReachabilityDeadlock.xml" ] ; then # for cunf (txt files deleted;-)
echo echo "here is the order used to build the result vector(from xml file)"
for x in $(grep '' ReachabilityDeadlock.xml | cut -d '>' -f 2 | cut -d '<' -f 1 | sort -u) ; do
echo "FORMULA_NAME $x"
done
fi
echo
echo "=== Now, execution of the tool begins"
echo
echo -n "BK_START "
date -u +%s%3N
echo
timeout -s 9 $BK_TIME_CONFINEMENT bash -c "/home/mcc/BenchKit/BenchKit_head.sh 2> STDERR ; echo ; echo -n \"BK_STOP \" ; date -u +%s%3N"
if [ $? -eq 137 ] ; then
echo
echo "BK_TIME_CONFINEMENT_REACHED"
fi
echo
echo "--------------------"
echo "content from stderr:"
echo
cat STDERR ;