About the Execution of Irma.struct for MAPK-PT-320
Execution Chart
We display below the execution chart for this examination (boot time has been removed).
Trace from the execution
Waiting for the VM to be ready (probing ssh)
........................
/home/mcc/execution
total 196K
-rw-r--r-- 1 mcc users 4.2K May 15 18:54 CTLCardinality.txt
-rw-r--r-- 1 mcc users 24K May 15 18:54 CTLCardinality.xml
-rw-r--r-- 1 mcc users 2.2K May 15 18:54 CTLFireability.txt
-rw-r--r-- 1 mcc users 15K May 15 18:54 CTLFireability.xml
-rw-r--r-- 1 mcc users 4.0K May 15 18:50 GenericPropertiesDefinition.xml
-rw-r--r-- 1 mcc users 5.9K May 15 18:50 GenericPropertiesVerdict.xml
-rw-r--r-- 1 mcc users 2.2K May 15 18:54 LTLCardinality.txt
-rw-r--r-- 1 mcc users 9.2K May 15 18:54 LTLCardinality.xml
-rw-r--r-- 1 mcc users 1.7K May 15 18:54 LTLFireability.txt
-rw-r--r-- 1 mcc users 7.6K May 15 18:54 LTLFireability.xml
-rw-r--r-- 1 mcc users 3.9K May 15 18:54 ReachabilityCardinality.txt
-rw-r--r-- 1 mcc users 20K May 15 18:54 ReachabilityCardinality.xml
-rw-r--r-- 1 mcc users 102 May 15 18:54 ReachabilityDeadlock.txt
-rw-r--r-- 1 mcc users 340 May 15 18:54 ReachabilityDeadlock.xml
-rw-r--r-- 1 mcc users 2.6K May 15 18:54 ReachabilityFireability.txt
-rw-r--r-- 1 mcc users 18K May 15 18:54 ReachabilityFireability.xml
-rw-r--r-- 1 mcc users 1.6K May 15 18:54 UpperBounds.txt
-rw-r--r-- 1 mcc users 3.6K May 15 18:54 UpperBounds.xml
-rw-r--r-- 1 mcc users 6 May 15 18:50 equiv_col
-rw-r--r-- 1 mcc users 4 May 15 18:50 instance
-rw-r--r-- 1 mcc users 6 May 15 18:50 iscolored
-rw-r--r-- 1 mcc users 25K May 15 18:50 model.pnml
=====================================================================
Generated by BenchKit 2-3637
Executing tool irma4mcc-structural
Input is MAPK-PT-320, examination is UpperBounds
Time confinement is 3600 seconds
Memory confinement is 16384 MBytes
Number of cores is 4
Run identifier is r115-csrt-152666473700191
=====================================================================
--------------------
content from stdout:
=== Data for post analysis generated by BenchKit (invocation template)
The expected result is a vector of positive values
NUM_VECTOR
here is the order used to build the result vector(from text file)
FORMULA_NAME MAPK-PT-320-UpperBounds-00
FORMULA_NAME MAPK-PT-320-UpperBounds-01
FORMULA_NAME MAPK-PT-320-UpperBounds-02
FORMULA_NAME MAPK-PT-320-UpperBounds-03
FORMULA_NAME MAPK-PT-320-UpperBounds-04
FORMULA_NAME MAPK-PT-320-UpperBounds-05
FORMULA_NAME MAPK-PT-320-UpperBounds-06
FORMULA_NAME MAPK-PT-320-UpperBounds-07
FORMULA_NAME MAPK-PT-320-UpperBounds-08
FORMULA_NAME MAPK-PT-320-UpperBounds-09
FORMULA_NAME MAPK-PT-320-UpperBounds-10
FORMULA_NAME MAPK-PT-320-UpperBounds-11
FORMULA_NAME MAPK-PT-320-UpperBounds-12
FORMULA_NAME MAPK-PT-320-UpperBounds-13
FORMULA_NAME MAPK-PT-320-UpperBounds-14
FORMULA_NAME MAPK-PT-320-UpperBounds-15
=== Now, execution of the tool begins
BK_START 1527151697196
BK_STOP 1527151755211
--------------------
content from stderr:
Prefix is 75f5f979.
Reading known information in /usr/share/mcc4mcc/75f5f979-known.json.
Reading learned information in /usr/share/mcc4mcc/75f5f979-learned.json.
Reading value translations in /usr/share/mcc4mcc/75f5f979-values.json.
Using directory /home/mcc/execution for input, as it contains a model.pnml file.
Using MAPK-PT-320 as instance name.
Using MAPK as model name.
Using algorithm or tool random-forest.
Model characteristics are: {'Examination': 'UpperBounds', 'Place/Transition': True, 'Colored': False, 'Relative-Time': 1, 'Relative-Memory': 1, 'Ordinary': True, 'Simple Free Choice': False, 'Extended Free Choice': False, 'State Machine': False, 'Marked Graph': False, 'Connected': True, 'Strongly Connected': True, 'Source Place': False, 'Sink Place': False, 'Source Transition': False, 'Sink Transition': False, 'Loop Free': True, 'Conservative': False, 'Sub-Conservative': False, 'Nested Units': False, 'Safe': False, 'Deadlock': None, 'Reversible': None, 'Quasi Live': True, 'Live': None}.
Known tools are: [{'Time': 98107, 'Memory': 8514.7, 'Tool': 'marcie'}, {'Time': 107795, 'Memory': 8514.73, 'Tool': 'marcie'}, {'Time': 2383321, 'Memory': 15952.8, 'Tool': 'lola'}, {'Time': 2402386, 'Memory': 15952.61, 'Tool': 'lola'}, {'Time': 2428513, 'Memory': 2249.25, 'Tool': 'gspn'}, {'Time': 2491163, 'Memory': 2277.6, 'Tool': 'gspn'}].
Learned tools are: [{'Tool': 'gspn'}].
Learned tool gspn is 24.753717879458144x far from the best tool marcie.
UpperBounds marcie MAPK-PT-320...
timeout --kill-after=10s --signal=SIGINT 1m for testing only
check for maximal unmarked siphon
ok
check for constant places
ok
check if there are places and transitions
ok
check if there are transitions without pre-places
ok
check if at least one transition is enabled in m0
ok
check if there are transitions that can never fire
ok
Marcie rev. 8852M (built: crohr on 2017-05-03)
A model checker for Generalized Stochastic Petri nets
authors: Alex Tovchigrechko (IDD package and CTL model checking)
Martin Schwarick (Symbolic numerical analysis and CSL model checking)
Christian Rohr (Simulative and approximative numerical model checking)
marcie@informatik.tu-cottbus.de
called as: marcie --net-file=model.pnml --mcc-file=UpperBounds.xml --memory=6
parse successfull
net created successfully
Net: MAPK_PT_320
(NrP: 22 NrTr: 30 NrArc: 90)
parse formulas
formulas created successfully
place and transition orderings generation:0m 0.000sec
ptnet_zbdd.cc:255: Boundedness exception: net is not 1-bounded!
net check time: 0m 0.000sec
init dd package: 0m 1.693sec
check for maximal unmarked siphon
parse successfull
net created successfully
Net: MAPK_PT_320
(NrP: 22 NrTr: 30 NrArc: 90)
ok
check for constant places
ok
check if there are places and transitions
ok
check if there are transitions without pre-places
ok
check if at least one transition is enabled in m0
ok
check if there are transitions that can never fire
ok
parse formulas
formulas created successfully
place and transition orderings generation:0m 0.000sec
net check time: 0m 0.000sec
init dd package: 0m 5.250sec
initing FirstDep: 0m 0.000sec
iterations count:41790 (1393), effective:6880 (229)
initing FirstDep: 0m 0.000sec
RS generation: 0m42.521sec
-> reachability set: #nodes 174862 (1.7e+05) #states 2,616,258,717,809,759,012,724,668,961 (27)
starting MCC model checker
--------------------------
checking: place_bound(MEK_RafP)
normalized: place_bound(MEK_RafP)
-> the formula is 160
FORMULA MAPK-PT-320-UpperBounds-00 160 TECHNIQUES SEQUENTIAL_PROCESSING DECISION_DIAGRAMS UNFOLDING_TO_PT
MC time: 0m 0.000sec
checking: place_bound(ERKP_MEKPP)
normalized: place_bound(ERKP_MEKPP)
-> the formula is 160
FORMULA MAPK-PT-320-UpperBounds-01 160 TECHNIQUES SEQUENTIAL_PROCESSING DECISION_DIAGRAMS UNFOLDING_TO_PT
MC time: 0m 0.000sec
checking: place_bound(Raf_RasGTP)
normalized: place_bound(Raf_RasGTP)
-> the formula is 80
FORMULA MAPK-PT-320-UpperBounds-02 80 TECHNIQUES SEQUENTIAL_PROCESSING DECISION_DIAGRAMS UNFOLDING_TO_PT
MC time: 0m 0.000sec
checking: place_bound(ERKPP_Phase3)
normalized: place_bound(ERKPP_Phase3)
-> the formula is 240
FORMULA MAPK-PT-320-UpperBounds-03 240 TECHNIQUES SEQUENTIAL_PROCESSING DECISION_DIAGRAMS UNFOLDING_TO_PT
MC time: 0m 0.000sec
checking: place_bound(ERKPP)
normalized: place_bound(ERKPP)
-> the formula is 240
FORMULA MAPK-PT-320-UpperBounds-04 240 TECHNIQUES SEQUENTIAL_PROCESSING DECISION_DIAGRAMS UNFOLDING_TO_PT
MC time: 0m 0.000sec
checking: place_bound(MEK)
normalized: place_bound(MEK)
-> the formula is 160
FORMULA MAPK-PT-320-UpperBounds-05 160 TECHNIQUES SEQUENTIAL_PROCESSING DECISION_DIAGRAMS UNFOLDING_TO_PT
MC time: 0m 0.000sec
checking: place_bound(ERK_MEKPP)
normalized: place_bound(ERK_MEKPP)
-> the formula is 160
FORMULA MAPK-PT-320-UpperBounds-06 160 TECHNIQUES SEQUENTIAL_PROCESSING DECISION_DIAGRAMS UNFOLDING_TO_PT
MC time: 0m 0.000sec
checking: place_bound(RafP)
normalized: place_bound(RafP)
-> the formula is 320
FORMULA MAPK-PT-320-UpperBounds-07 320 TECHNIQUES SEQUENTIAL_PROCESSING DECISION_DIAGRAMS UNFOLDING_TO_PT
MC time: 0m 0.000sec
checking: place_bound(RasGTP)
normalized: place_bound(RasGTP)
-> the formula is 80
FORMULA MAPK-PT-320-UpperBounds-08 80 TECHNIQUES SEQUENTIAL_PROCESSING DECISION_DIAGRAMS UNFOLDING_TO_PT
MC time: 0m 0.000sec
checking: place_bound(ERK_MEKPP)
normalized: place_bound(ERK_MEKPP)
-> the formula is 160
FORMULA MAPK-PT-320-UpperBounds-09 160 TECHNIQUES SEQUENTIAL_PROCESSING DECISION_DIAGRAMS UNFOLDING_TO_PT
MC time: 0m 0.000sec
checking: place_bound(RafP_Phase1)
normalized: place_bound(RafP_Phase1)
-> the formula is 240
FORMULA MAPK-PT-320-UpperBounds-10 240 TECHNIQUES SEQUENTIAL_PROCESSING DECISION_DIAGRAMS UNFOLDING_TO_PT
MC time: 0m 0.000sec
checking: place_bound(RafP)
normalized: place_bound(RafP)
-> the formula is 320
FORMULA MAPK-PT-320-UpperBounds-11 320 TECHNIQUES SEQUENTIAL_PROCESSING DECISION_DIAGRAMS UNFOLDING_TO_PT
MC time: 0m 0.000sec
checking: place_bound(ERKP)
normalized: place_bound(ERKP)
-> the formula is 240
FORMULA MAPK-PT-320-UpperBounds-12 240 TECHNIQUES SEQUENTIAL_PROCESSING DECISION_DIAGRAMS UNFOLDING_TO_PT
MC time: 0m 0.000sec
checking: place_bound(ERKP)
normalized: place_bound(ERKP)
-> the formula is 240
FORMULA MAPK-PT-320-UpperBounds-13 240 TECHNIQUES SEQUENTIAL_PROCESSING DECISION_DIAGRAMS UNFOLDING_TO_PT
MC time: 0m 0.000sec
checking: place_bound(MEK)
normalized: place_bound(MEK)
-> the formula is 160
FORMULA MAPK-PT-320-UpperBounds-14 160 TECHNIQUES SEQUENTIAL_PROCESSING DECISION_DIAGRAMS UNFOLDING_TO_PT
MC time: 0m 0.000sec
checking: place_bound(MEK)
normalized: place_bound(MEK)
-> the formula is 160
FORMULA MAPK-PT-320-UpperBounds-15 160 TECHNIQUES SEQUENTIAL_PROCESSING DECISION_DIAGRAMS UNFOLDING_TO_PT
MC time: 0m 0.000sec
totally nodes used: 4101364 (4.1e+06)
number of garbage collections: 0
fire ops cache: hits/miss/sum: 229992681 25092623 255085304
used/not used/entry size/cache size: 23273583 43835281 16 1024MB
basic ops cache: hits/miss/sum: 3022849 49700 3072549
used/not used/entry size/cache size: 93977 16683239 12 192MB
unary ops cache: hits/miss/sum: 0 0 0
used/not used/entry size/cache size: 0 16777216 8 128MB
abstract ops cache: hits/miss/sum: 0 0 0
used/not used/entry size/cache size: 0 16777216 12 192MB
state nr cache: hits/miss/sum: 5698756 178455 5877211
used/not used/entry size/cache size: 173332 8215276 32 256MB
max state cache: hits/miss/sum: 0 0 0
used/not used/entry size/cache size: 0 8388608 32 256MB
uniqueHash elements/entry size/size: 67108864 4 256MB
0 63268617
1 3614157
2 212322
3 12253
4 682
5 45
6 1
7 322
8 82
9 81
>= 10 302
Total processing time: 0m54.489sec
Sequence of Actions to be Executed by the VM
This is useful if one wants to reexecute the tool in the VM from the submitted image disk.
set -x
# this is for BenchKit: configuration of major elements for the test
export BK_INPUT="MAPK-PT-320"
export BK_EXAMINATION="UpperBounds"
export BK_TOOL="irma4mcc-structural"
export BK_RESULT_DIR="/tmp/BK_RESULTS/OUTPUTS"
export BK_TIME_CONFINEMENT="3600"
export BK_MEMORY_CONFINEMENT="16384"
# this is specific to your benchmark or test
export BIN_DIR="$HOME/BenchKit/bin"
# remove the execution directoty if it exists (to avoid increse of .vmdk images)
if [ -d execution ] ; then
rm -rf execution
fi
tar xzf /home/mcc/BenchKit/INPUTS/MAPK-PT-320.tgz
mv MAPK-PT-320 execution
cd execution
pwd
ls -lh
# this is for BenchKit: explicit launching of the test
echo "====================================================================="
echo " Generated by BenchKit 2-3637"
echo " Executing tool irma4mcc-structural"
echo " Input is MAPK-PT-320, examination is UpperBounds"
echo " Time confinement is $BK_TIME_CONFINEMENT seconds"
echo " Memory confinement is 16384 MBytes"
echo " Number of cores is 4"
echo " Run identifier is r115-csrt-152666473700191"
echo "====================================================================="
echo
echo "--------------------"
echo "content from stdout:"
echo
echo "=== Data for post analysis generated by BenchKit (invocation template)"
echo
if [ "UpperBounds" = "UpperBounds" ] ; then
echo "The expected result is a vector of positive values"
echo NUM_VECTOR
elif [ "UpperBounds" != "StateSpace" ] ; then
echo "The expected result is a vector of booleans"
echo BOOL_VECTOR
else
echo "no data necessary for post analysis"
fi
echo
if [ -f "UpperBounds.txt" ] ; then
echo "here is the order used to build the result vector(from text file)"
for x in $(grep Property UpperBounds.txt | cut -d ' ' -f 2 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ -f "UpperBounds.xml" ] ; then # for cunf (txt files deleted;-)
echo echo "here is the order used to build the result vector(from xml file)"
for x in $(grep '
echo "FORMULA_NAME $x"
done
fi
echo
echo "=== Now, execution of the tool begins"
echo
echo -n "BK_START "
date -u +%s%3N
echo
timeout -s 9 $BK_TIME_CONFINEMENT bash -c "/home/mcc/BenchKit/BenchKit_head.sh 2> STDERR ; echo ; echo -n \"BK_STOP \" ; date -u +%s%3N"
if [ $? -eq 137 ] ; then
echo
echo "BK_TIME_CONFINEMENT_REACHED"
fi
echo
echo "--------------------"
echo "content from stderr:"
echo
cat STDERR ;