Execution Chart

We display below the execution chart for this examination (boot time has been removed).

Trace from the execution

Waiting for the VM to be ready (probing ssh)
...................
/home/mcc/execution
total 196K
-rw-r--r-- 1 mcc users 4.2K May 15 18:54 CTLCardinality.txt
-rw-r--r-- 1 mcc users 24K May 15 18:54 CTLCardinality.xml
-rw-r--r-- 1 mcc users 2.2K May 15 18:54 CTLFireability.txt
-rw-r--r-- 1 mcc users 15K May 15 18:54 CTLFireability.xml
-rw-r--r-- 1 mcc users 4.0K May 15 18:50 GenericPropertiesDefinition.xml
-rw-r--r-- 1 mcc users 5.9K May 15 18:50 GenericPropertiesVerdict.xml
-rw-r--r-- 1 mcc users 2.2K May 15 18:54 LTLCardinality.txt
-rw-r--r-- 1 mcc users 9.2K May 15 18:54 LTLCardinality.xml
-rw-r--r-- 1 mcc users 1.7K May 15 18:54 LTLFireability.txt
-rw-r--r-- 1 mcc users 7.6K May 15 18:54 LTLFireability.xml
-rw-r--r-- 1 mcc users 3.9K May 15 18:54 ReachabilityCardinality.txt
-rw-r--r-- 1 mcc users 20K May 15 18:54 ReachabilityCardinality.xml
-rw-r--r-- 1 mcc users 102 May 15 18:54 ReachabilityDeadlock.txt
-rw-r--r-- 1 mcc users 340 May 15 18:54 ReachabilityDeadlock.xml
-rw-r--r-- 1 mcc users 2.6K May 15 18:54 ReachabilityFireability.txt
-rw-r--r-- 1 mcc users 18K May 15 18:54 ReachabilityFireability.xml
-rw-r--r-- 1 mcc users 1.6K May 15 18:54 UpperBounds.txt
-rw-r--r-- 1 mcc users 3.6K May 15 18:54 UpperBounds.xml
-rw-r--r-- 1 mcc users 6 May 15 18:50 equiv_col
-rw-r--r-- 1 mcc users 4 May 15 18:50 instance
-rw-r--r-- 1 mcc users 6 May 15 18:50 iscolored
-rw-r--r-- 1 mcc users 25K May 15 18:50 model.pnml
=====================================================================
Generated by BenchKit 2-3637
Executing tool irma4mcc-full
Input is MAPK-PT-320, examination is CTLFireability
Time confinement is 3600 seconds
Memory confinement is 16384 MBytes
Number of cores is 4
Run identifier is r114-csrt-152666472300193
=====================================================================

--------------------
content from stdout:

=== Data for post analysis generated by BenchKit (invocation template)

The expected result is a vector of booleans
BOOL_VECTOR

here is the order used to build the result vector(from text file)
FORMULA_NAME MAPK-PT-320-CTLFireability-00
FORMULA_NAME MAPK-PT-320-CTLFireability-01
FORMULA_NAME MAPK-PT-320-CTLFireability-02
FORMULA_NAME MAPK-PT-320-CTLFireability-03
FORMULA_NAME MAPK-PT-320-CTLFireability-04
FORMULA_NAME MAPK-PT-320-CTLFireability-05
FORMULA_NAME MAPK-PT-320-CTLFireability-06
FORMULA_NAME MAPK-PT-320-CTLFireability-07
FORMULA_NAME MAPK-PT-320-CTLFireability-08
FORMULA_NAME MAPK-PT-320-CTLFireability-09
FORMULA_NAME MAPK-PT-320-CTLFireability-10
FORMULA_NAME MAPK-PT-320-CTLFireability-11
FORMULA_NAME MAPK-PT-320-CTLFireability-12
FORMULA_NAME MAPK-PT-320-CTLFireability-13
FORMULA_NAME MAPK-PT-320-CTLFireability-14
FORMULA_NAME MAPK-PT-320-CTLFireability-15

=== Now, execution of the tool begins

BK_START 1527139504175


BK_STOP 1527139732899

--------------------
content from stderr:

Prefix is 65b80f64.
Reading known information in /usr/share/mcc4mcc/65b80f64-known.json.
Reading learned information in /usr/share/mcc4mcc/65b80f64-learned.json.
Reading value translations in /usr/share/mcc4mcc/65b80f64-values.json.
Using directory /home/mcc/execution for input, as it contains a model.pnml file.
Using MAPK-PT-320 as instance name.
Using MAPK as model name.
Using algorithm or tool voting-classifier.
Model characteristics are: {'Examination': 'CTLFireability', 'Place/Transition': True, 'Colored': False, 'Relative-Time': 1, 'Relative-Memory': 1, 'Ordinary': True, 'Simple Free Choice': False, 'Extended Free Choice': False, 'State Machine': False, 'Marked Graph': False, 'Connected': True, 'Strongly Connected': True, 'Source Place': False, 'Sink Place': False, 'Source Transition': False, 'Sink Transition': False, 'Loop Free': True, 'Conservative': False, 'Sub-Conservative': False, 'Nested Units': False, 'Safe': False, 'Deadlock': None, 'Reversible': None, 'Quasi Live': True, 'Live': None}.
/usr/local/lib/python3.6/dist-packages/sklearn/preprocessing/label.py:151: DeprecationWarning: The truth value of an empty array is ambiguous. Returning False, but in future this will result in an error. Use `array.size > 0` to check that an array is not empty.
if diff:
Known tools are: [{'Time': 828283, 'Memory': 15942.39, 'Tool': 'lola'}, {'Time': 852092, 'Memory': 15937.97, 'Tool': 'lola'}].
Learned tools are: [{'Tool': 'itstools'}].
CTLFireability lola MAPK-PT-320...

Time: 3600 - MCC
----- Start make prepare stdout -----
----- Start make prepare stderr -----
===========================================================================================
MAPK-PT-320: translating PT Petri net model.pnml into LoLA format
===========================================================================================
translating PT Petri net complete


checking for too many tokens
===========================================================================================
MAPK-PT-320: translating PT formula CTLFireability into LoLA format
===========================================================================================
translating formula complete
touch formulae;
----- Start make result stderr -----
----- Start make result stdout -----
CTLFireability @ MAPK-PT-320 @ 3539 seconds
Makefile:222: recipe for target 'verify' failed
----- Start make result stdout -----
make: [verify] Error 134 (ignored)
----- Start make result stderr -----
lola: LoLA will run for 3539 seconds at most (--timelimit)
lola: NET
lola: reading net from model.pnml.lola
lola: finished parsing
lola: closed net file model.pnml.lola
lola: 52/65536 symbol table entries, 0 collisions
lola: preprocessing...
lola: finding significant places
lola: 22 places, 30 transitions, 15 significant places
lola: computing forward-conflicting sets
lola: computing back-conflicting sets
lola: 25 transition conflict sets
lola: TASK
lola: reading formula from MAPK-PT-320-CTLFireability.task
lola: A (G ((E (F ((FIREABLE(k25) AND FIREABLE(k29)))) OR A (G (NOT FIREABLE(k25)))))) : (E (F (NOT(E (F (FIREABLE(k24)))))) AND E ((A (F (FIREABLE(k20))) U (NOT FIREABLE(k6) OR NOT FIREABLE(k1))))) : (A (F (FIREABLE(k25))) OR ((A (X (FIREABLE(k12))) OR A (G ((FIREABLE(k27) OR FIREABLE(k1))))) OR (NOT FIREABLE(k24) AND NOT FIREABLE(k3) AND FIREABLE(k11) AND FIREABLE(k25)))) : A (G (NOT(A (G ((FIREABLE(k29))))))) : FIREABLE(k29) : (A (G (E (G (FIREABLE(k12))))) AND E (G (NOT FIREABLE(k15)))) : ((FIREABLE(k8) AND (((FIREABLE(k14) OR FIREABLE(k18)) OR E (G (FIREABLE(k23)))) OR ((NOT FIREABLE(k21) AND NOT FIREABLE(k12)) OR E (G (FIREABLE(k3)))))) AND FIREABLE(k10)) : A (F ((E (F ((FIREABLE(k3) OR FIREABLE(k8)))) AND (NOT FIREABLE(k3) AND NOT FIREABLE(k4) AND NOT FIREABLE(k4) AND NOT FIREABLE(k2))))) : E (X (FIREABLE(k19))) : ((A (G (E (X (FIREABLE(k5))))) AND (A (X (NOT FIREABLE(k12))) AND A (G ((FIREABLE(k18) OR FIREABLE(k19)))))) OR A ((E (F (FIREABLE(k22))) U (NOT FIREABLE(k11) AND NOT FIREABLE(k26))))) : A (G (E (((FIREABLE(k13) OR FIREABLE(k30)) U NOT FIREABLE(k23))))) : NOT(A (G (((FIREABLE(k12) OR FIREABLE(k9) OR NOT FIREABLE(k28)) OR A (F (FIREABLE(k29))))))) : FIREABLE(k25) : FIREABLE(k13) : ((E (G (A (G (FIREABLE(k4))))) AND E (G (((FIREABLE(k26) AND FIREABLE(k16)) OR FIREABLE(k3))))) OR A (X (E (F (FIREABLE(k16)))))) : FIREABLE(k14)
lola: computing a collection of formulas
lola: RUNNING
lola: subprocess 0 will run for 221 seconds at most (--localtimelimit=-1)
lola: ========================================
lola: ...considering subproblem: A (G ((E (F ((FIREABLE(k25) AND FIREABLE(k29)))) OR A (G (NOT FIREABLE(k25))))))
lola: ========================================
lola: SUBTASK
lola: checking CTL
lola: processed formula: NOT(E(TRUE U (NOT(E(TRUE U (FIREABLE(k25) AND FIREABLE(k29)))) AND E(TRUE U FIREABLE(k25)))))
lola: processed formula length: 93
lola: 6 rewrites
lola: formula mentions 0 of 22 places; total mentions: 0
lola: closed formula file MAPK-PT-320-CTLFireability.task
lola: STORE
lola: using a bit-perfect encoder (--encoder=bit)
lola: using 60 bytes per marking, with 0 unused bits
lola: using a prefix tree store (--store=prefix)
lola: Using CTL preserving stubborn sets
lola: RUNNING
lola: CTL formula contains 3 significant temporal operators and needs 13 bytes of payload
lola: Ignoring fairness constraints (--fair).
lola: 1707812 markings, 8617778 edges, 3689348869717491712 markings/sec, 0 secs
lola: 3437546 markings, 16781100 edges, 345947 markings/sec, 5 secs
lola: 5239527 markings, 24872450 edges, 360396 markings/sec, 10 secs
lola: 7083221 markings, 33320100 edges, 368739 markings/sec, 15 secs
lola: 8853535 markings, 41326874 edges, 354063 markings/sec, 20 secs
lola: 10580322 markings, 49380372 edges, 345357 markings/sec, 25 secs
lola: 12421684 markings, 57834188 edges, 368272 markings/sec, 30 secs
lola: 13991804 markings, 65418193 edges, 314024 markings/sec, 35 secs
lola: 15725214 markings, 73451390 edges, 346682 markings/sec, 40 secs
lola: 17368115 markings, 81196708 edges, 328580 markings/sec, 45 secs
lola: 19230631 markings, 89890653 edges, 372503 markings/sec, 50 secs
lola: 20810163 markings, 97658126 edges, 315906 markings/sec, 55 secs
lola: 22496573 markings, 105379817 edges, 337282 markings/sec, 60 secs
lola: 24167072 markings, 113354785 edges, 334100 markings/sec, 65 secs
lola: 25945504 markings, 121883108 edges, 355686 markings/sec, 70 secs
lola: 27574902 markings, 129720989 edges, 325880 markings/sec, 75 secs
lola: 29315649 markings, 137801179 edges, 348149 markings/sec, 80 secs
lola: 30877196 markings, 145425807 edges, 312309 markings/sec, 85 secs
lola: 32489386 markings, 153015787 edges, 322438 markings/sec, 90 secs
lola: 34213669 markings, 161319715 edges, 344857 markings/sec, 95 secs
lola: 35932526 markings, 169146206 edges, 343771 markings/sec, 100 secs
lola: 37622655 markings, 177297185 edges, 338026 markings/sec, 105 secs
lola: 39266877 markings, 184932144 edges, 328844 markings/sec, 110 secs
lola: 40832964 markings, 192616966 edges, 313217 markings/sec, 115 secs
lola: 42470761 markings, 200034776 edges, 327559 markings/sec, 120 secs
lola: 44269977 markings, 208397357 edges, 359843 markings/sec, 125 secs
lola: 45931171 markings, 215861940 edges, 332239 markings/sec, 130 secs
lola: 47576104 markings, 223443821 edges, 328987 markings/sec, 135 secs
lola: 49285504 markings, 231386293 edges, 341880 markings/sec, 140 secs
lola: 50782279 markings, 238416461 edges, 299355 markings/sec, 145 secs
lola: 52362481 markings, 245834894 edges, 316040 markings/sec, 150 secs
lola: 53981340 markings, 253465077 edges, 323772 markings/sec, 155 secs
lola: 55598434 markings, 260946545 edges, 323419 markings/sec, 160 secs
lola: 57455150 markings, 269149996 edges, 371343 markings/sec, 165 secs
lola: 59042874 markings, 276961843 edges, 317545 markings/sec, 170 secs
lola: 60792576 markings, 285142312 edges, 349940 markings/sec, 175 secs
lola: 62446646 markings, 293367086 edges, 330814 markings/sec, 180 secs
lola: 64177839 markings, 301365930 edges, 346239 markings/sec, 185 secs
lola: 65828529 markings, 309425778 edges, 330138 markings/sec, 190 secs
lola: 67691374 markings, 317933277 edges, 372569 markings/sec, 195 secs
lola: 69327930 markings, 325720884 edges, 327311 markings/sec, 200 secs
lola: 71157595 markings, 334353026 edges, 365933 markings/sec, 205 secs
lola: 72914940 markings, 342635963 edges, 351469 markings/sec, 210 secs
lola: 74271153 markings, 349523661 edges, 271243 markings/sec, 215 secs
lola: local time limit reached - aborting
lola: Child process aborted or communication problem between parent and child process
terminate called after throwing an instance of 'std::runtime_error'
what(): parse error at position 0: unexpected character, last read: '\ufffd'
Aborted (core dumped)
FORMULA MAPK-PT-320-CTLFireability-0 CANNOT_COMPUTE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS TOPOLOGICAL USE_NUPN
FORMULA MAPK-PT-320-CTLFireability-1 CANNOT_COMPUTE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS TOPOLOGICAL USE_NUPN
FORMULA MAPK-PT-320-CTLFireability-2 CANNOT_COMPUTE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS TOPOLOGICAL USE_NUPN
FORMULA MAPK-PT-320-CTLFireability-3 CANNOT_COMPUTE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS TOPOLOGICAL USE_NUPN
FORMULA MAPK-PT-320-CTLFireability-4 CANNOT_COMPUTE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS TOPOLOGICAL USE_NUPN
FORMULA MAPK-PT-320-CTLFireability-5 CANNOT_COMPUTE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS TOPOLOGICAL USE_NUPN
FORMULA MAPK-PT-320-CTLFireability-6 CANNOT_COMPUTE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS TOPOLOGICAL USE_NUPN
FORMULA MAPK-PT-320-CTLFireability-7 CANNOT_COMPUTE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS TOPOLOGICAL USE_NUPN
FORMULA MAPK-PT-320-CTLFireability-8 CANNOT_COMPUTE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS TOPOLOGICAL USE_NUPN
FORMULA MAPK-PT-320-CTLFireability-9 CANNOT_COMPUTE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS TOPOLOGICAL USE_NUPN
FORMULA MAPK-PT-320-CTLFireability-10 CANNOT_COMPUTE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS TOPOLOGICAL USE_NUPN
FORMULA MAPK-PT-320-CTLFireability-11 CANNOT_COMPUTE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS TOPOLOGICAL USE_NUPN
FORMULA MAPK-PT-320-CTLFireability-12 CANNOT_COMPUTE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS TOPOLOGICAL USE_NUPN
FORMULA MAPK-PT-320-CTLFireability-13 CANNOT_COMPUTE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS TOPOLOGICAL USE_NUPN
FORMULA MAPK-PT-320-CTLFireability-14 CANNOT_COMPUTE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS TOPOLOGICAL USE_NUPN
FORMULA MAPK-PT-320-CTLFireability-15 CANNOT_COMPUTE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS TOPOLOGICAL USE_NUPN
----- Kill lola and sara stdout -----
----- Kill lola and sara stderr -----
----- Finished stdout -----
----- Finished stderr -----

Sequence of Actions to be Executed by the VM

This is useful if one wants to reexecute the tool in the VM from the submitted image disk.

set -x
# this is for BenchKit: configuration of major elements for the test
export BK_INPUT="MAPK-PT-320"
export BK_EXAMINATION="CTLFireability"
export BK_TOOL="irma4mcc-full"
export BK_RESULT_DIR="/tmp/BK_RESULTS/OUTPUTS"
export BK_TIME_CONFINEMENT="3600"
export BK_MEMORY_CONFINEMENT="16384"

# this is specific to your benchmark or test

export BIN_DIR="$HOME/BenchKit/bin"

# remove the execution directoty if it exists (to avoid increse of .vmdk images)
if [ -d execution ] ; then
rm -rf execution
fi

tar xzf /home/mcc/BenchKit/INPUTS/MAPK-PT-320.tgz
mv MAPK-PT-320 execution
cd execution
pwd
ls -lh

# this is for BenchKit: explicit launching of the test
echo "====================================================================="
echo " Generated by BenchKit 2-3637"
echo " Executing tool irma4mcc-full"
echo " Input is MAPK-PT-320, examination is CTLFireability"
echo " Time confinement is $BK_TIME_CONFINEMENT seconds"
echo " Memory confinement is 16384 MBytes"
echo " Number of cores is 4"
echo " Run identifier is r114-csrt-152666472300193"
echo "====================================================================="
echo
echo "--------------------"
echo "content from stdout:"
echo
echo "=== Data for post analysis generated by BenchKit (invocation template)"
echo
if [ "CTLFireability" = "UpperBounds" ] ; then
echo "The expected result is a vector of positive values"
echo NUM_VECTOR
elif [ "CTLFireability" != "StateSpace" ] ; then
echo "The expected result is a vector of booleans"
echo BOOL_VECTOR
else
echo "no data necessary for post analysis"
fi
echo
if [ -f "CTLFireability.txt" ] ; then
echo "here is the order used to build the result vector(from text file)"
for x in $(grep Property CTLFireability.txt | cut -d ' ' -f 2 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ -f "CTLFireability.xml" ] ; then # for cunf (txt files deleted;-)
echo echo "here is the order used to build the result vector(from xml file)"
for x in $(grep '' CTLFireability.xml | cut -d '>' -f 2 | cut -d '<' -f 1 | sort -u) ; do
echo "FORMULA_NAME $x"
done
fi
echo
echo "=== Now, execution of the tool begins"
echo
echo -n "BK_START "
date -u +%s%3N
echo
timeout -s 9 $BK_TIME_CONFINEMENT bash -c "/home/mcc/BenchKit/BenchKit_head.sh 2> STDERR ; echo ; echo -n \"BK_STOP \" ; date -u +%s%3N"
if [ $? -eq 137 ] ; then
echo
echo "BK_TIME_CONFINEMENT_REACHED"
fi
echo
echo "--------------------"
echo "content from stderr:"
echo
cat STDERR ;