Execution Chart

We display below the execution chart for this examination (boot time has been removed).

Trace from the execution

Waiting for the VM to be ready (probing ssh)
....................
/home/mcc/execution
total 256K
-rw-r--r-- 1 mcc users 4.1K May 15 18:54 CTLCardinality.txt
-rw-r--r-- 1 mcc users 20K May 15 18:54 CTLCardinality.xml
-rw-r--r-- 1 mcc users 3.3K May 15 18:54 CTLFireability.txt
-rw-r--r-- 1 mcc users 17K May 15 18:54 CTLFireability.xml
-rw-r--r-- 1 mcc users 4.0K May 15 18:50 GenericPropertiesDefinition.xml
-rw-r--r-- 1 mcc users 5.9K May 15 18:50 GenericPropertiesVerdict.xml
-rw-r--r-- 1 mcc users 2.8K May 15 18:54 LTLCardinality.txt
-rw-r--r-- 1 mcc users 12K May 15 18:54 LTLCardinality.xml
-rw-r--r-- 1 mcc users 2.4K May 15 18:54 LTLFireability.txt
-rw-r--r-- 1 mcc users 11K May 15 18:54 LTLFireability.xml
-rw-r--r-- 1 mcc users 3.5K May 15 18:54 ReachabilityCardinality.txt
-rw-r--r-- 1 mcc users 14K May 15 18:54 ReachabilityCardinality.xml
-rw-r--r-- 1 mcc users 118 May 15 18:54 ReachabilityDeadlock.txt
-rw-r--r-- 1 mcc users 356 May 15 18:54 ReachabilityDeadlock.xml
-rw-r--r-- 1 mcc users 4.6K May 15 18:54 ReachabilityFireability.txt
-rw-r--r-- 1 mcc users 24K May 15 18:54 ReachabilityFireability.xml
-rw-r--r-- 1 mcc users 1.9K May 15 18:54 UpperBounds.txt
-rw-r--r-- 1 mcc users 3.9K May 15 18:54 UpperBounds.xml
-rw-r--r-- 1 mcc users 6 May 15 18:50 equiv_col
-rw-r--r-- 1 mcc users 10 May 15 18:50 instance
-rw-r--r-- 1 mcc users 6 May 15 18:50 iscolored
-rwxr-xr-x 1 mcc users 79K May 15 18:50 model.pnml
=====================================================================
Generated by BenchKit 2-3637
Executing tool itstoolsl
Input is HypertorusGrid-PT-d2k3p2b04, examination is CTLFireability
Time confinement is 3600 seconds
Memory confinement is 16384 MBytes
Number of cores is 4
Run identifier is r105-smll-152658635300144
=====================================================================

--------------------
content from stdout:

=== Data for post analysis generated by BenchKit (invocation template)

The expected result is a vector of booleans
BOOL_VECTOR

here is the order used to build the result vector(from text file)
FORMULA_NAME HypertorusGrid-PT-d2k3p2b04-CTLFireability-00
FORMULA_NAME HypertorusGrid-PT-d2k3p2b04-CTLFireability-01
FORMULA_NAME HypertorusGrid-PT-d2k3p2b04-CTLFireability-02
FORMULA_NAME HypertorusGrid-PT-d2k3p2b04-CTLFireability-03
FORMULA_NAME HypertorusGrid-PT-d2k3p2b04-CTLFireability-04
FORMULA_NAME HypertorusGrid-PT-d2k3p2b04-CTLFireability-05
FORMULA_NAME HypertorusGrid-PT-d2k3p2b04-CTLFireability-06
FORMULA_NAME HypertorusGrid-PT-d2k3p2b04-CTLFireability-07
FORMULA_NAME HypertorusGrid-PT-d2k3p2b04-CTLFireability-08
FORMULA_NAME HypertorusGrid-PT-d2k3p2b04-CTLFireability-09
FORMULA_NAME HypertorusGrid-PT-d2k3p2b04-CTLFireability-10
FORMULA_NAME HypertorusGrid-PT-d2k3p2b04-CTLFireability-11
FORMULA_NAME HypertorusGrid-PT-d2k3p2b04-CTLFireability-12
FORMULA_NAME HypertorusGrid-PT-d2k3p2b04-CTLFireability-13
FORMULA_NAME HypertorusGrid-PT-d2k3p2b04-CTLFireability-14
FORMULA_NAME HypertorusGrid-PT-d2k3p2b04-CTLFireability-15

=== Now, execution of the tool begins

BK_START 1527370901013

Converted graph to binary with : CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.louvain.binaries_1.0.0.201805241334/bin/convert-linux64, -i, /tmp/graph253421394483815710.txt, -o, /tmp/graph253421394483815710.bin, -w, /tmp/graph253421394483815710.weights], workingDir=null]
Built communities with : CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.louvain.binaries_1.0.0.201805241334/bin/louvain-linux64, /tmp/graph253421394483815710.bin, -l, -1, -v, -w, /tmp/graph253421394483815710.weights, -q, 0, -e, 0.001], workingDir=null]
Invoking ITS tools like this :CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.201805241334/bin/its-ctl-linux64, --gc-threshold, 2000000, --quiet, -i, /home/mcc/execution/CTLFireability.pnml.gal, -t, CGAL, -ctl, /home/mcc/execution/CTLFireability.ctl], workingDir=/home/mcc/execution]

its-ctl command run as :

/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.201805241334/bin/its-ctl-linux64 --gc-threshold 2000000 --quiet -i /home/mcc/execution/CTLFireability.pnml.gal -t CGAL -ctl /home/mcc/execution/CTLFireability.ctl
No direction supplied, using forward translation only.
Parsed 16 CTL formulae.
built 27 ordering constraints for composite.
built 20 ordering constraints for composite.
built 20 ordering constraints for composite.
built 20 ordering constraints for composite.
built 20 ordering constraints for composite.
built 20 ordering constraints for composite.
built 20 ordering constraints for composite.
built 20 ordering constraints for composite.
built 20 ordering constraints for composite.
built 20 ordering constraints for composite.
terminate called after throwing an instance of 'std::bad_alloc'
what(): std::bad_alloc

BK_STOP 1527371899484

--------------------
content from stderr:

+ export BINDIR=/home/mcc/BenchKit/
+ BINDIR=/home/mcc/BenchKit/
++ pwd
+ export MODEL=/home/mcc/execution
+ MODEL=/home/mcc/execution
+ /home/mcc/BenchKit//runeclipse.sh /home/mcc/execution CTLFireability -its -ltsminpath /home/mcc/BenchKit//lts_install_dir/ -louvain -smt
+ ulimit -s 65536
+ [[ -z '' ]]
+ export LTSMIN_MEM_SIZE=8589934592
+ LTSMIN_MEM_SIZE=8589934592
+ /home/mcc/BenchKit//itstools/its-tools -consoleLog -data /home/mcc/execution/workspace -pnfolder /home/mcc/execution -examination CTLFireability -z3path /home/mcc/BenchKit//z3/bin/z3 -yices2path /home/mcc/BenchKit//yices/bin/yices -its -ltsminpath /home/mcc/BenchKit//lts_install_dir/ -louvain -smt -vmargs -Dosgi.locking=none -Declipse.stateSaveDelayInterval=-1 -Dosgi.configuration.area=/tmp/.eclipse -Xss8m -Xms40m -Xmx8192m -Dfile.encoding=UTF-8 -Dosgi.requiredJavaVersion=1.6
May 26, 2018 9:41:43 PM fr.lip6.move.gal.application.Application start
INFO: Running its-tools with arguments : [-pnfolder, /home/mcc/execution, -examination, CTLFireability, -z3path, /home/mcc/BenchKit//z3/bin/z3, -yices2path, /home/mcc/BenchKit//yices/bin/yices, -its, -ltsminpath, /home/mcc/BenchKit//lts_install_dir/, -louvain, -smt]
May 26, 2018 9:41:43 PM fr.lip6.move.gal.application.MccTranslator transformPNML
INFO: Parsing pnml file : /home/mcc/execution/model.pnml
May 26, 2018 9:41:43 PM fr.lip6.move.gal.nupn.PTNetReader loadFromXML
INFO: Load time of PNML (sax parser for PT used): 74 ms
May 26, 2018 9:41:43 PM fr.lip6.move.gal.pnml.togal.PTGALTransformer handlePage
INFO: Transformed 117 places.
May 26, 2018 9:41:43 PM fr.lip6.move.gal.pnml.togal.PTGALTransformer handlePage
INFO: Transformed 144 transitions.
May 26, 2018 9:41:43 PM fr.lip6.move.serialization.SerializationUtil systemToFile
INFO: Time to serialize gal into /home/mcc/execution/model.pnml.img.gal : 20 ms
May 26, 2018 9:41:43 PM fr.lip6.move.gal.application.MccTranslator applyOrder
INFO: Applying decomposition
May 26, 2018 9:41:44 PM fr.lip6.move.gal.instantiate.GALRewriter flatten
INFO: Flatten gal took : 72 ms
May 26, 2018 9:41:44 PM fr.lip6.move.gal.instantiate.GALRewriter flatten
INFO: Flatten gal took : 40 ms
Begin: Sat May 26 21:41:44 2018

Computation of communities with the Newman-Girvan Modularity quality function

level 0:
start computation: Sat May 26 21:41:44 2018
network size: 117 nodes, 576 links, 288 weight
quality increased from -0.0121528 to 0.465278
end computation: Sat May 26 21:41:44 2018
level 1:
start computation: Sat May 26 21:41:44 2018
network size: 45 nodes, 189 links, 288 weight
quality increased from 0.465278 to 0.763889
end computation: Sat May 26 21:41:44 2018
level 2:
start computation: Sat May 26 21:41:44 2018
network size: 9 nodes, 45 links, 288 weight
quality increased from 0.763889 to 0.763889
end computation: Sat May 26 21:41:44 2018
End: Sat May 26 21:41:44 2018
Total duration: 0 sec
0.763889
May 26, 2018 9:41:44 PM fr.lip6.move.gal.instantiate.CompositeBuilder decomposeWithOrder
INFO: Decomposing Gal with order
May 26, 2018 9:41:44 PM fr.lip6.move.gal.instantiate.GALRewriter flatten
INFO: Flatten gal took : 47 ms
May 26, 2018 9:41:44 PM fr.lip6.move.gal.instantiate.CompositeBuilder rewriteArraysToAllowPartition
INFO: Rewriting arrays to variables to allow decomposition.
May 26, 2018 9:41:44 PM fr.lip6.move.gal.instantiate.Instantiator fuseIsomorphicEffects
INFO: Removed a total of 144 redundant transitions.
May 26, 2018 9:41:44 PM fr.lip6.move.serialization.SerializationUtil systemToFile
INFO: Time to serialize gal into /home/mcc/execution/CTLFireability.pnml.gal : 6 ms
May 26, 2018 9:41:44 PM fr.lip6.move.serialization.SerializationUtil serializePropertiesForITSCTLTools
INFO: Time to serialize properties into /home/mcc/execution/CTLFireability.ctl : 2 ms
ITS-tools command line returned an error code 134

Sequence of Actions to be Executed by the VM

This is useful if one wants to reexecute the tool in the VM from the submitted image disk.

set -x
# this is for BenchKit: configuration of major elements for the test
export BK_INPUT="HypertorusGrid-PT-d2k3p2b04"
export BK_EXAMINATION="CTLFireability"
export BK_TOOL="itstoolsl"
export BK_RESULT_DIR="/tmp/BK_RESULTS/OUTPUTS"
export BK_TIME_CONFINEMENT="3600"
export BK_MEMORY_CONFINEMENT="16384"

# this is specific to your benchmark or test

export BIN_DIR="$HOME/BenchKit/bin"

# remove the execution directoty if it exists (to avoid increse of .vmdk images)
if [ -d execution ] ; then
rm -rf execution
fi

tar xzf /home/mcc/BenchKit/INPUTS/HypertorusGrid-PT-d2k3p2b04.tgz
mv HypertorusGrid-PT-d2k3p2b04 execution
cd execution
pwd
ls -lh

# this is for BenchKit: explicit launching of the test
echo "====================================================================="
echo " Generated by BenchKit 2-3637"
echo " Executing tool itstoolsl"
echo " Input is HypertorusGrid-PT-d2k3p2b04, examination is CTLFireability"
echo " Time confinement is $BK_TIME_CONFINEMENT seconds"
echo " Memory confinement is 16384 MBytes"
echo " Number of cores is 4"
echo " Run identifier is r105-smll-152658635300144"
echo "====================================================================="
echo
echo "--------------------"
echo "content from stdout:"
echo
echo "=== Data for post analysis generated by BenchKit (invocation template)"
echo
if [ "CTLFireability" = "UpperBounds" ] ; then
echo "The expected result is a vector of positive values"
echo NUM_VECTOR
elif [ "CTLFireability" != "StateSpace" ] ; then
echo "The expected result is a vector of booleans"
echo BOOL_VECTOR
else
echo "no data necessary for post analysis"
fi
echo
if [ -f "CTLFireability.txt" ] ; then
echo "here is the order used to build the result vector(from text file)"
for x in $(grep Property CTLFireability.txt | cut -d ' ' -f 2 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ -f "CTLFireability.xml" ] ; then # for cunf (txt files deleted;-)
echo echo "here is the order used to build the result vector(from xml file)"
for x in $(grep '' CTLFireability.xml | cut -d '>' -f 2 | cut -d '<' -f 1 | sort -u) ; do
echo "FORMULA_NAME $x"
done
fi
echo
echo "=== Now, execution of the tool begins"
echo
echo -n "BK_START "
date -u +%s%3N
echo
timeout -s 9 $BK_TIME_CONFINEMENT bash -c "/home/mcc/BenchKit/BenchKit_head.sh 2> STDERR ; echo ; echo -n \"BK_STOP \" ; date -u +%s%3N"
if [ $? -eq 137 ] ; then
echo
echo "BK_TIME_CONFINEMENT_REACHED"
fi
echo
echo "--------------------"
echo "content from stderr:"
echo
cat STDERR ;