Execution Chart

We display below the execution chart for this examination (boot time has been removed).

Trace from the execution

Waiting for the VM to be ready (probing ssh)
..................................................................................................................
/home/mcc/execution
total 196K
-rw-r--r-- 1 mcc users 4.0K May 15 18:54 CTLCardinality.txt
-rw-r--r-- 1 mcc users 23K May 15 18:54 CTLCardinality.xml
-rw-r--r-- 1 mcc users 2.8K May 15 18:54 CTLFireability.txt
-rw-r--r-- 1 mcc users 14K May 15 18:54 CTLFireability.xml
-rw-r--r-- 1 mcc users 4.0K May 15 18:50 GenericPropertiesDefinition.xml
-rw-r--r-- 1 mcc users 5.7K May 15 18:50 GenericPropertiesVerdict.xml
-rw-r--r-- 1 mcc users 2.6K May 15 18:54 LTLCardinality.txt
-rw-r--r-- 1 mcc users 12K May 15 18:54 LTLCardinality.xml
-rw-r--r-- 1 mcc users 2.2K May 15 18:54 LTLFireability.txt
-rw-r--r-- 1 mcc users 8.8K May 15 18:54 LTLFireability.xml
-rw-r--r-- 1 mcc users 3.6K May 15 18:54 ReachabilityCardinality.txt
-rw-r--r-- 1 mcc users 18K May 15 18:54 ReachabilityCardinality.xml
-rw-r--r-- 1 mcc users 115 May 15 18:54 ReachabilityDeadlock.txt
-rw-r--r-- 1 mcc users 353 May 15 18:54 ReachabilityDeadlock.xml
-rw-r--r-- 1 mcc users 4.0K May 15 18:54 ReachabilityFireability.txt
-rw-r--r-- 1 mcc users 21K May 15 18:54 ReachabilityFireability.xml
-rw-r--r-- 1 mcc users 1.7K May 15 18:54 UpperBounds.txt
-rw-r--r-- 1 mcc users 3.8K May 15 18:54 UpperBounds.xml
-rw-r--r-- 1 mcc users 6 May 15 18:50 equiv_col
-rw-r--r-- 1 mcc users 17 May 15 18:50 instance
-rw-r--r-- 1 mcc users 6 May 15 18:50 iscolored
-rw-r--r-- 1 mcc users 21K May 15 18:50 model.pnml
=====================================================================
Generated by BenchKit 2-3637
Executing tool itstoolsl
Input is GPPP-PT-C0001N0000000010, examination is CTLCardinality
Time confinement is 3600 seconds
Memory confinement is 16384 MBytes
Number of cores is 4
Run identifier is r093-blw7-152650005500248
=====================================================================

--------------------
content from stdout:

=== Data for post analysis generated by BenchKit (invocation template)

The expected result is a vector of booleans
BOOL_VECTOR

here is the order used to build the result vector(from text file)
FORMULA_NAME GPPP-PT-C0001N0000000010-CTLCardinality-00
FORMULA_NAME GPPP-PT-C0001N0000000010-CTLCardinality-01
FORMULA_NAME GPPP-PT-C0001N0000000010-CTLCardinality-02
FORMULA_NAME GPPP-PT-C0001N0000000010-CTLCardinality-03
FORMULA_NAME GPPP-PT-C0001N0000000010-CTLCardinality-04
FORMULA_NAME GPPP-PT-C0001N0000000010-CTLCardinality-05
FORMULA_NAME GPPP-PT-C0001N0000000010-CTLCardinality-06
FORMULA_NAME GPPP-PT-C0001N0000000010-CTLCardinality-07
FORMULA_NAME GPPP-PT-C0001N0000000010-CTLCardinality-08
FORMULA_NAME GPPP-PT-C0001N0000000010-CTLCardinality-09
FORMULA_NAME GPPP-PT-C0001N0000000010-CTLCardinality-10
FORMULA_NAME GPPP-PT-C0001N0000000010-CTLCardinality-11
FORMULA_NAME GPPP-PT-C0001N0000000010-CTLCardinality-12
FORMULA_NAME GPPP-PT-C0001N0000000010-CTLCardinality-13
FORMULA_NAME GPPP-PT-C0001N0000000010-CTLCardinality-14
FORMULA_NAME GPPP-PT-C0001N0000000010-CTLCardinality-15

=== Now, execution of the tool begins

BK_START 1527396993234

Invoking ITS tools like this :CommandLine [args=[/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.201805241334/bin/its-ctl-linux64, --gc-threshold, 2000000, --quiet, -i, /home/mcc/execution/CTLCardinality.pnml.gal, -t, CGAL, -ctl, /home/mcc/execution/CTLCardinality.ctl], workingDir=/home/mcc/execution]

its-ctl command run as :

/home/mcc/BenchKit/itstools/plugins/fr.lip6.move.gal.itstools.binaries_1.0.0.201805241334/bin/its-ctl-linux64 --gc-threshold 2000000 --quiet -i /home/mcc/execution/CTLCardinality.pnml.gal -t CGAL -ctl /home/mcc/execution/CTLCardinality.ctl
No direction supplied, using forward translation only.
Parsed 16 CTL formulae.
Model ,|S| ,Time ,Mem(kb) ,fin. SDD ,fin. DDD ,peak SDD ,peak DDD ,SDD Hom ,SDD cache peak ,DDD Hom ,DDD cachepeak ,SHom cache
reachable,1.65535e+06,1.08391,46720,2,4057,5,216894,6,0,161,255465,0


Converting to forward existential form...Done !
original formula: E(EF((b1>=1)) U EF((start>=3)))
=> equivalent forward existential formula: [(FwdU(FwdU(Init,E(TRUE U (b1>=1))),TRUE) * (start>=3))] != FALSE
(forward)formula 0,0,1.08456,46720,1,0,5,216894,8,0,163,255465,0
FORMULA GPPP-PT-C0001N0000000010-CTLCardinality-00 FALSE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL USE_NUPN
Formula is FALSE !

***************************************

original formula: EF((EX((ADP<=Lac)) * (((GAP>=2)||(F6P<=NADplus))&&(_3PG>=2))))
=> equivalent forward existential formula: [(EY((FwdU(Init,TRUE) * (((GAP>=2)||(F6P<=NADplus))&&(_3PG>=2)))) * (ADP<=Lac))] != FALSE
(forward)formula 1,1,1.10415,46720,1,0,10,216894,10,2,439,255465,3
FORMULA GPPP-PT-C0001N0000000010-CTLCardinality-01 TRUE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL USE_NUPN
Formula is TRUE !

***************************************

original formula: AG(!(AG((PEP<=Lac))))
=> equivalent forward existential formula: [(FwdU(Init,TRUE) * !(E(TRUE U !((PEP<=Lac)))))] = FALSE
Reverse transition relation is NOT exact ! Due to transitions Transketolase2, Intersection with reachable at each step enabled. (destroyed/reverse/intersect/total) :0/21/1/22
(forward)formula 2,1,1.32852,46720,1,0,49,216894,67,27,1255,255465,59
FORMULA GPPP-PT-C0001N0000000010-CTLCardinality-02 TRUE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL USE_NUPN
Formula is TRUE !

***************************************

original formula: ((A((GAP>=1) U (b2>=1)) + (EF((S7P>=2)) * (((S7P>=3)||(NADPplus>=3))&&(!(NADPplus<=NADPH))))) + ((_3PG>=3) + (AF((Lac<=NADH)) * ((Ru5P>=3)&&(PEP>=2)))))
=> equivalent forward existential formula: ([FwdG(((Init * !((!((E(!((b2>=1)) U (!((GAP>=1)) * !((b2>=1)))) + EG(!((b2>=1))))) + (E(TRUE U (S7P>=2)) * (((S7P>=3)||(NADPplus>=3))&&(!(NADPplus<=NADPH))))))) * !((_3PG>=3))),!((Lac<=NADH)))] = FALSE * [(((Init * !((!((E(!((b2>=1)) U (!((GAP>=1)) * !((b2>=1)))) + EG(!((b2>=1))))) + (E(TRUE U (S7P>=2)) * (((S7P>=3)||(NADPplus>=3))&&(!(NADPplus<=NADPH))))))) * !((_3PG>=3))) * !(((Ru5P>=3)&&(PEP>=2))))] = FALSE)
(forward)formula 3,0,2.03043,58552,1,0,364,272109,85,145,1323,255465,667
FORMULA GPPP-PT-C0001N0000000010-CTLCardinality-03 FALSE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL USE_NUPN
Formula is FALSE !

***************************************

original formula: AG(!((_2PG>=2)))
=> equivalent forward existential formula: [(FwdU(Init,TRUE) * (_2PG>=2))] = FALSE
(forward)formula 4,0,2.03521,58816,1,0,366,273646,86,146,1324,256434,668
FORMULA GPPP-PT-C0001N0000000010-CTLCardinality-04 FALSE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL USE_NUPN
Formula is FALSE !

***************************************

original formula: (A(((ATP>=3)||(Pi<=start)) U !((GAP<=GSSG))) + !((AG((NADplus>=3)) * ((Pi<=PEP)&&((c1>=3)&&(ADP<=PEP))))))
=> equivalent forward existential formula: ([((Init * !(EG(!(!((GAP<=GSSG)))))) * !(E(!(!((GAP<=GSSG))) U (!(((ATP>=3)||(Pi<=start))) * !(!((GAP<=GSSG)))))))] != FALSE + ([(FwdU(Init,TRUE) * !((NADplus>=3)))] != FALSE + [(Init * !(((Pi<=PEP)&&((c1>=3)&&(ADP<=PEP)))))] != FALSE))
(forward)formula 5,0,2.16173,64096,1,0,373,300322,99,150,1369,290116,678
FORMULA GPPP-PT-C0001N0000000010-CTLCardinality-05 FALSE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL USE_NUPN
Formula is FALSE !

***************************************

original formula: AX(AG(!((Pyr>=3))))
=> equivalent forward existential formula: [(FwdU(EY(Init),TRUE) * (Pyr>=3))] = FALSE
(forward)formula 6,0,3.15525,101584,1,0,376,493673,101,151,1403,529720,682
FORMULA GPPP-PT-C0001N0000000010-CTLCardinality-06 FALSE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL USE_NUPN
Formula is FALSE !

***************************************

original formula: AG(EF((G6P<=R5P)))
=> equivalent forward existential formula: [(FwdU(Init,TRUE) * !(E(TRUE U (G6P<=R5P))))] = FALSE
(forward)formula 7,1,3.18036,102640,1,0,377,496906,102,151,1412,533734,685
FORMULA GPPP-PT-C0001N0000000010-CTLCardinality-07 TRUE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL USE_NUPN
Formula is TRUE !

***************************************

original formula: E((_3PG<=E4P) U AF((GSSG<=GAP)))
=> equivalent forward existential formula: [(FwdU(Init,(_3PG<=E4P)) * !(EG(!((GSSG<=GAP)))))] != FALSE
Hit Full ! (commute/partial/dont) 18/0/4
(forward)formula 8,1,3.57933,116960,1,0,385,560528,115,155,1485,604779,696
FORMULA GPPP-PT-C0001N0000000010-CTLCardinality-08 TRUE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL USE_NUPN
Formula is TRUE !

***************************************

original formula: AG((GSSG>=3))
=> equivalent forward existential formula: [(FwdU(Init,TRUE) * !((GSSG>=3)))] = FALSE
(forward)formula 9,0,3.57988,117224,1,0,388,560547,117,157,1487,604806,697
FORMULA GPPP-PT-C0001N0000000010-CTLCardinality-09 FALSE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL USE_NUPN
Formula is FALSE !

***************************************

original formula: (((((_2PG>=3)&&((start>=3)||(E4P>=2))) + AG((E4P<=GSSG))) * AF(!((Gluc>=1)))) + ((((GAP<=Pi)&&((G6P<=a1)&&(b2<=c2))) + AG((NADH<=S7P))) * (!(((GSSG<=F6P)||(_3PG>=1))) * AG((Pi<=FBP)))))
=> equivalent forward existential formula: ([(FwdU(((Init * !(((((_2PG>=3)&&((start>=3)||(E4P>=2))) + !(E(TRUE U !((E4P<=GSSG))))) * !(EG(!(!((Gluc>=1)))))))) * !(((GAP<=Pi)&&((G6P<=a1)&&(b2<=c2))))),TRUE) * !((NADH<=S7P)))] = FALSE * ([((Init * !(((((_2PG>=3)&&((start>=3)||(E4P>=2))) + !(E(TRUE U !((E4P<=GSSG))))) * !(EG(!(!((Gluc>=1)))))))) * ((GSSG<=F6P)||(_3PG>=1)))] = FALSE * [(FwdU((Init * !(((((_2PG>=3)&&((start>=3)||(E4P>=2))) + !(E(TRUE U !((E4P<=GSSG))))) * !(EG(!(!((Gluc>=1)))))))),TRUE) * !((Pi<=FBP)))] = FALSE))
(forward)formula 10,0,4.39864,140456,1,0,541,692471,127,165,1529,722652,1145
FORMULA GPPP-PT-C0001N0000000010-CTLCardinality-10 FALSE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL USE_NUPN
Formula is FALSE !

***************************************

original formula: !((AG(((c1<=ATP)||(F6P<=c1))) * E((NADH<=E4P) U (Xu5P>=3))))
=> equivalent forward existential formula: ([(FwdU(Init,TRUE) * !(((c1<=ATP)||(F6P<=c1))))] != FALSE + [(Init * !(E((NADH<=E4P) U (Xu5P>=3))))] != FALSE)
(forward)formula 11,1,4.40955,141248,1,0,542,692581,134,165,1572,722768,1147
FORMULA GPPP-PT-C0001N0000000010-CTLCardinality-11 TRUE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL USE_NUPN
Formula is TRUE !

***************************************

original formula: AG(EX((_2PG<=E4P)))
=> equivalent forward existential formula: [(FwdU(Init,TRUE) * !(EX((_2PG<=E4P))))] = FALSE
(forward)formula 12,0,4.48407,143888,1,0,548,711185,135,169,1581,741485,1152
FORMULA GPPP-PT-C0001N0000000010-CTLCardinality-12 FALSE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL USE_NUPN
Formula is FALSE !

***************************************

original formula: E((c2<=start) U (((PEP<=Lac)&&(start<=PEP))&&((NADPplus<=Lac)&&(ATP>=1))))
=> equivalent forward existential formula: [(FwdU(Init,(c2<=start)) * (((PEP<=Lac)&&(start<=PEP))&&((NADPplus<=Lac)&&(ATP>=1))))] != FALSE
Hit Full ! (commute/partial/dont) 18/0/4
(forward)formula 13,0,4.51035,145208,1,0,552,715548,143,170,1637,744363,1156
FORMULA GPPP-PT-C0001N0000000010-CTLCardinality-13 FALSE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL USE_NUPN
Formula is FALSE !

***************************************

original formula: ((EF(!((_2PG<=GSH))) * (NADPplus<=F6P)) + EG(AG((ATP>=2))))
=> equivalent forward existential formula: ([(FwdU((Init * (NADPplus<=F6P)),TRUE) * !((_2PG<=GSH)))] != FALSE + [FwdG(Init,!(E(TRUE U !((ATP>=2)))))] != FALSE)
(forward)formula 14,1,4.55384,147848,1,0,555,717605,149,171,1667,750757,1160
FORMULA GPPP-PT-C0001N0000000010-CTLCardinality-14 TRUE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL USE_NUPN
Formula is TRUE !

***************************************

original formula: (((_2PG<=start) * AG(((b1>=3)||(ATP>=1)))) + AF((_1_3_BPG>=3)))
=> equivalent forward existential formula: [FwdG((Init * !(((_2PG<=start) * !(E(TRUE U !(((b1>=3)||(ATP>=1)))))))),!((_1_3_BPG>=3)))] = FALSE
(forward)formula 15,1,4.55896,148112,1,0,557,717815,159,174,1679,751035,1163
FORMULA GPPP-PT-C0001N0000000010-CTLCardinality-15 TRUE TECHNIQUES DECISION_DIAGRAMS TOPOLOGICAL USE_NUPN
Formula is TRUE !

***************************************

ITS tools runner thread asked to quit. Dying gracefully.

BK_STOP 1527397000264

--------------------
content from stderr:

+ export BINDIR=/home/mcc/BenchKit/
+ BINDIR=/home/mcc/BenchKit/
++ pwd
+ export MODEL=/home/mcc/execution
+ MODEL=/home/mcc/execution
+ /home/mcc/BenchKit//runeclipse.sh /home/mcc/execution CTLCardinality -its -ltsminpath /home/mcc/BenchKit//lts_install_dir/ -louvain -smt
+ ulimit -s 65536
+ [[ -z '' ]]
+ export LTSMIN_MEM_SIZE=8589934592
+ LTSMIN_MEM_SIZE=8589934592
+ /home/mcc/BenchKit//itstools/its-tools -consoleLog -data /home/mcc/execution/workspace -pnfolder /home/mcc/execution -examination CTLCardinality -z3path /home/mcc/BenchKit//z3/bin/z3 -yices2path /home/mcc/BenchKit//yices/bin/yices -its -ltsminpath /home/mcc/BenchKit//lts_install_dir/ -louvain -smt -vmargs -Dosgi.locking=none -Declipse.stateSaveDelayInterval=-1 -Dosgi.configuration.area=/tmp/.eclipse -Xss8m -Xms40m -Xmx8192m -Dfile.encoding=UTF-8 -Dosgi.requiredJavaVersion=1.6
May 27, 2018 4:56:35 AM fr.lip6.move.gal.application.Application start
INFO: Running its-tools with arguments : [-pnfolder, /home/mcc/execution, -examination, CTLCardinality, -z3path, /home/mcc/BenchKit//z3/bin/z3, -yices2path, /home/mcc/BenchKit//yices/bin/yices, -its, -ltsminpath, /home/mcc/BenchKit//lts_install_dir/, -louvain, -smt]
May 27, 2018 4:56:35 AM fr.lip6.move.gal.application.MccTranslator transformPNML
INFO: Parsing pnml file : /home/mcc/execution/model.pnml
May 27, 2018 4:56:35 AM fr.lip6.move.gal.nupn.PTNetReader loadFromXML
INFO: Load time of PNML (sax parser for PT used): 32 ms
May 27, 2018 4:56:35 AM fr.lip6.move.gal.pnml.togal.PTGALTransformer handlePage
INFO: Transformed 33 places.
May 27, 2018 4:56:35 AM fr.lip6.move.gal.pnml.togal.PTGALTransformer handlePage
INFO: Transformed 22 transitions.
May 27, 2018 4:56:35 AM fr.lip6.move.serialization.SerializationUtil systemToFile
INFO: Time to serialize gal into /home/mcc/execution/model.pnml.img.gal : 10 ms
May 27, 2018 4:56:35 AM fr.lip6.move.gal.instantiate.GALRewriter flatten
INFO: Flatten gal took : 43 ms
May 27, 2018 4:56:35 AM fr.lip6.move.serialization.SerializationUtil systemToFile
INFO: Time to serialize gal into /home/mcc/execution/CTLCardinality.pnml.gal : 1 ms
May 27, 2018 4:56:35 AM fr.lip6.move.serialization.SerializationUtil serializePropertiesForITSCTLTools
INFO: Time to serialize properties into /home/mcc/execution/CTLCardinality.ctl : 2 ms

Sequence of Actions to be Executed by the VM

This is useful if one wants to reexecute the tool in the VM from the submitted image disk.

set -x
# this is for BenchKit: configuration of major elements for the test
export BK_INPUT="GPPP-PT-C0001N0000000010"
export BK_EXAMINATION="CTLCardinality"
export BK_TOOL="itstoolsl"
export BK_RESULT_DIR="/tmp/BK_RESULTS/OUTPUTS"
export BK_TIME_CONFINEMENT="3600"
export BK_MEMORY_CONFINEMENT="16384"

# this is specific to your benchmark or test

export BIN_DIR="$HOME/BenchKit/bin"

# remove the execution directoty if it exists (to avoid increse of .vmdk images)
if [ -d execution ] ; then
rm -rf execution
fi

tar xzf /home/mcc/BenchKit/INPUTS/GPPP-PT-C0001N0000000010.tgz
mv GPPP-PT-C0001N0000000010 execution
cd execution
pwd
ls -lh

# this is for BenchKit: explicit launching of the test
echo "====================================================================="
echo " Generated by BenchKit 2-3637"
echo " Executing tool itstoolsl"
echo " Input is GPPP-PT-C0001N0000000010, examination is CTLCardinality"
echo " Time confinement is $BK_TIME_CONFINEMENT seconds"
echo " Memory confinement is 16384 MBytes"
echo " Number of cores is 4"
echo " Run identifier is r093-blw7-152650005500248"
echo "====================================================================="
echo
echo "--------------------"
echo "content from stdout:"
echo
echo "=== Data for post analysis generated by BenchKit (invocation template)"
echo
if [ "CTLCardinality" = "UpperBounds" ] ; then
echo "The expected result is a vector of positive values"
echo NUM_VECTOR
elif [ "CTLCardinality" != "StateSpace" ] ; then
echo "The expected result is a vector of booleans"
echo BOOL_VECTOR
else
echo "no data necessary for post analysis"
fi
echo
if [ -f "CTLCardinality.txt" ] ; then
echo "here is the order used to build the result vector(from text file)"
for x in $(grep Property CTLCardinality.txt | cut -d ' ' -f 2 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ -f "CTLCardinality.xml" ] ; then # for cunf (txt files deleted;-)
echo echo "here is the order used to build the result vector(from xml file)"
for x in $(grep '' CTLCardinality.xml | cut -d '>' -f 2 | cut -d '<' -f 1 | sort -u) ; do
echo "FORMULA_NAME $x"
done
fi
echo
echo "=== Now, execution of the tool begins"
echo
echo -n "BK_START "
date -u +%s%3N
echo
timeout -s 9 $BK_TIME_CONFINEMENT bash -c "/home/mcc/BenchKit/BenchKit_head.sh 2> STDERR ; echo ; echo -n \"BK_STOP \" ; date -u +%s%3N"
if [ $? -eq 137 ] ; then
echo
echo "BK_TIME_CONFINEMENT_REACHED"
fi
echo
echo "--------------------"
echo "content from stderr:"
echo
cat STDERR ;