fond

jQuery Multi Level CSS Menu Css3Menu.com

Model Checking Contest 2018
8th edition, Bratislava, Slovakia, June 26, 2018
Execution of r090-blw7-152650001400336
Last Updated
June 26, 2018

About the Execution of Irma.full for GPPP-PT-C0100N0000100000

Execution Summary
Max Memory
Used (MB)		 Time wait (ms) CPU Usage (ms) I/O Wait (ms) Computed Result Execution
Status
15919.360 740754.00 1122546.00 7268.00 ???????????????? normal

Execution Chart

We display below the execution chart for this examination (boot time has been removed).

Trace from the execution

Waiting for the VM to be ready (probing ssh)
.............................................
/home/mcc/execution
total 192K
-rw-r--r-- 1 mcc users 3.5K May 15 18:54 CTLCardinality.txt
-rw-r--r-- 1 mcc users 19K May 15 18:54 CTLCardinality.xml
-rw-r--r-- 1 mcc users 3.2K May 15 18:54 CTLFireability.txt
-rw-r--r-- 1 mcc users 17K May 15 18:54 CTLFireability.xml
-rw-r--r-- 1 mcc users 4.0K May 15 18:50 GenericPropertiesDefinition.xml
-rw-r--r-- 1 mcc users 5.7K May 15 18:50 GenericPropertiesVerdict.xml
-rw-r--r-- 1 mcc users 2.6K May 15 18:54 LTLCardinality.txt
-rw-r--r-- 1 mcc users 12K May 15 18:54 LTLCardinality.xml
-rw-r--r-- 1 mcc users 2.3K May 15 18:54 LTLFireability.txt
-rw-r--r-- 1 mcc users 9.6K May 15 18:54 LTLFireability.xml
-rw-r--r-- 1 mcc users 3.9K May 15 18:54 ReachabilityCardinality.txt
-rw-r--r-- 1 mcc users 20K May 15 18:54 ReachabilityCardinality.xml
-rw-r--r-- 1 mcc users 115 May 15 18:54 ReachabilityDeadlock.txt
-rw-r--r-- 1 mcc users 353 May 15 18:54 ReachabilityDeadlock.xml
-rw-r--r-- 1 mcc users 3.6K May 15 18:54 ReachabilityFireability.txt
-rw-r--r-- 1 mcc users 18K May 15 18:54 ReachabilityFireability.xml
-rw-r--r-- 1 mcc users 1.7K May 15 18:54 UpperBounds.txt
-rw-r--r-- 1 mcc users 3.8K May 15 18:54 UpperBounds.xml
-rw-r--r-- 1 mcc users 6 May 15 18:50 equiv_col
-rw-r--r-- 1 mcc users 17 May 15 18:50 instance
-rw-r--r-- 1 mcc users 6 May 15 18:50 iscolored
-rw-r--r-- 1 mcc users 21K May 15 18:50 model.pnml
=====================================================================
Generated by BenchKit 2-3637
Executing tool irma4mcc-full
Input is GPPP-PT-C0100N0000100000, examination is ReachabilityFireability
Time confinement is 3600 seconds
Memory confinement is 16384 MBytes
Number of cores is 4
Run identifier is r090-blw7-152650001400336
=====================================================================

--------------------
content from stdout:

=== Data for post analysis generated by BenchKit (invocation template)

The expected result is a vector of booleans
BOOL_VECTOR

here is the order used to build the result vector(from text file)
FORMULA_NAME GPPP-PT-C0100N0000100000-ReachabilityFireability-00
FORMULA_NAME GPPP-PT-C0100N0000100000-ReachabilityFireability-01
FORMULA_NAME GPPP-PT-C0100N0000100000-ReachabilityFireability-02
FORMULA_NAME GPPP-PT-C0100N0000100000-ReachabilityFireability-03
FORMULA_NAME GPPP-PT-C0100N0000100000-ReachabilityFireability-04
FORMULA_NAME GPPP-PT-C0100N0000100000-ReachabilityFireability-05
FORMULA_NAME GPPP-PT-C0100N0000100000-ReachabilityFireability-06
FORMULA_NAME GPPP-PT-C0100N0000100000-ReachabilityFireability-07
FORMULA_NAME GPPP-PT-C0100N0000100000-ReachabilityFireability-08
FORMULA_NAME GPPP-PT-C0100N0000100000-ReachabilityFireability-09
FORMULA_NAME GPPP-PT-C0100N0000100000-ReachabilityFireability-10
FORMULA_NAME GPPP-PT-C0100N0000100000-ReachabilityFireability-11
FORMULA_NAME GPPP-PT-C0100N0000100000-ReachabilityFireability-12
FORMULA_NAME GPPP-PT-C0100N0000100000-ReachabilityFireability-13
FORMULA_NAME GPPP-PT-C0100N0000100000-ReachabilityFireability-14
FORMULA_NAME GPPP-PT-C0100N0000100000-ReachabilityFireability-15

=== Now, execution of the tool begins

BK_START 1527069387801


BK_STOP 1527070128555

--------------------
content from stderr:

Prefix is 65b80f64.
Reading known information in /usr/share/mcc4mcc/65b80f64-known.json.
Reading learned information in /usr/share/mcc4mcc/65b80f64-learned.json.
Reading value translations in /usr/share/mcc4mcc/65b80f64-values.json.
Using directory /home/mcc/execution for input, as it contains a model.pnml file.
Using GPPP-PT-C0100N0000100000 as instance name.
Using GPPP as model name.
Using algorithm or tool decision-tree.
Model characteristics are: {'Examination': 'ReachabilityFireability', 'Place/Transition': True, 'Colored': False, 'Relative-Time': 1, 'Relative-Memory': 1, 'Ordinary': False, 'Simple Free Choice': False, 'Extended Free Choice': False, 'State Machine': False, 'Marked Graph': False, 'Connected': True, 'Strongly Connected': True, 'Source Place': False, 'Sink Place': False, 'Source Transition': False, 'Sink Transition': False, 'Loop Free': True, 'Conservative': False, 'Sub-Conservative': False, 'Nested Units': False, 'Safe': False, 'Deadlock': None, 'Reversible': None, 'Quasi Live': True, 'Live': None}.
Known tools are: [{'Time': 305959, 'Memory': 15952.4, 'Tool': 'lola'}, {'Time': 331578, 'Memory': 15949.29, 'Tool': 'lola'}].
Learned tools are: [{'Tool': 'lola'}].
Learned tool lola is 1.0x far from the best tool lola.
ReachabilityFireability lola GPPP-PT-C0100N0000100000...
----- Start make prepare stderr -----

Time: 3600 - MCC
----- Start make prepare stdout -----
===========================================================================================
GPPP-PT-C0100N0000100000: translating PT Petri net model.pnml into LoLA format
===========================================================================================
translating PT Petri net complete


checking for too many tokens
===========================================================================================
GPPP-PT-C0100N0000100000: translating PT formula ReachabilityFireability into LoLA format
===========================================================================================
translating formula complete
touch formulae;
----- Start make result stderr -----
----- Start make result stdout -----
ReachabilityFireability @ GPPP-PT-C0100N0000100000 @ 3540 seconds
Makefile:222: recipe for target 'verify' failed
----- Start make result stdout -----
lola: LoLA will run for 3540 seconds at most (--timelimit)
lola: NET
lola: reading net from model.pnml.lola
lola: finished parsing
lola: closed net file model.pnml.lola
lola: 55/65536 symbol table entries, 0 collisions
lola: preprocessing...
lola: finding significant places
lola: 33 places, 22 transitions, 21 significant places
lola: computing forward-conflicting sets
lola: computing back-conflicting sets
lola: 30 transition conflict sets
lola: TASK
lola: reading formula from GPPP-PT-C0100N0000100000-ReachabilityFireability.task
lola: E (F ((FIREABLE(Phosphoglucose_isomerase) AND FIREABLE(TIM_forward) AND FIREABLE(Pyruvate_kinase) AND (FIREABLE(Enolase) OR FIREABLE(GAP_dehydrogenase))))) : E (F (((NOT FIREABLE(Ru5P_isomerase) OR NOT FIREABLE(Ru5P_epimerase)) AND FIREABLE(Pyruvate_kinase) AND FIREABLE(Glutathione_reductose)))) : E (F (((FIREABLE(TIM_forward)) AND FIREABLE(G6P_dehydrogenase) AND FIREABLE(Pyruvate_kinase) AND (FIREABLE(Ru5P_isomerase) OR FIREABLE(Lactate_dehydrogenase)) AND ((FIREABLE(Phosphoglycerate_kinase) AND FIREABLE(Glutathione_oxidation)) OR NOT FIREABLE(Enolase) OR (FIREABLE(TIM_backward) AND FIREABLE(Enolase) AND (FIREABLE(remove) OR FIREABLE(Phosphoglycerate_kinase))))))) : E (F ((NOT FIREABLE(GAP_dehydrogenase) AND NOT FIREABLE(Transaldolase) AND (NOT FIREABLE(Enolase) OR NOT FIREABLE(Transaldolase)) AND FIREABLE(Pyruvate_kinase)))) : E (F ((FIREABLE(Transaldolase) AND FIREABLE(Ru5P_isomerase) AND FIREABLE(generate) AND NOT FIREABLE(remove) AND NOT FIREABLE(Phosphoglycerate_mutase) AND FIREABLE(Enolase) AND (FIREABLE(Phosphoglucose_isomerase) OR FIREABLE(Aldolase) OR FIREABLE(Ru5P_epimerase))))) : E (F ((FIREABLE(Lactate_dehydrogenase) AND FIREABLE(Transketolase2)))) : A (G ((FIREABLE(Aldolase) OR FIREABLE(Transketolase2) OR NOT FIREABLE(Lactate_dehydrogenase)))) : A (G ((NOT FIREABLE(Pyruvate_kinase) OR NOT FIREABLE(Hexokinase) OR FIREABLE(Glutathione_oxidation) OR (NOT FIREABLE(Glutathione_oxidation) AND FIREABLE(Hexokinase))))) : A (G ((NOT FIREABLE(Ru5P_isomerase) OR NOT FIREABLE(Transaldolase)))) : E (F (FIREABLE(remove))) : E (F (FIREABLE(remove))) : E (F (((NOT FIREABLE(G6P_dehydrogenase)) AND FIREABLE(Lactate_dehydrogenase) AND ((FIREABLE(Transketolase2)) OR FIREABLE(generate)) AND (NOT FIREABLE(G6P_dehydrogenase) OR NOT FIREABLE(Transketolase1))))) : E (F ((FIREABLE(Phosphoglycerate_mutase) AND FIREABLE(Aldolase) AND NOT FIREABLE(generate) AND (FIREABLE(Glutathione_reductose) OR (FIREABLE(Glutathione_oxidation) AND FIREABLE(generate))) AND (FIREABLE(Phosphoglycerate_mutase) OR (FIREABLE(GAP_dehydrogenase) AND FIREABLE(Aldolase)))))) : E (F (FIREABLE(Lactate_dehydrogenase))) : E (F (((NOT FIREABLE(Phosphoglycerate_kinase) OR NOT FIREABLE(Aldolase)) AND NOT FIREABLE(remove) AND FIREABLE(Lactate_dehydrogenase) AND NOT FIREABLE(Phosphofructokinase)))) : A (G ((NOT FIREABLE(TIM_backward) OR NOT FIREABLE(Transketolase2))))
lola: computing a collection of formulas
lola: RUNNING
lola: subprocess 0 will run for 221 seconds at most (--localtimelimit=-1)
lola: ========================================
lola: ...considering subproblem: E (F ((FIREABLE(Phosphoglucose_isomerase) AND FIREABLE(TIM_forward) AND FIREABLE(Pyruvate_kinase) AND (FIREABLE(Enolase) OR FIREABLE(GAP_dehydrogenase)))))
lola: ========================================
lola: SUBTASK
lola: checking reachability
lola: Planning: workflow for reachability check: stateequation||search (--findpath=off)
lola: STORE
lola: using a bit-perfect encoder (--encoder=bit)
lola: using 84 bytes per marking, with 0 unused bits
lola: using a prefix tree store (--store=prefix)
lola: SEARCH (state space)
lola: state space: using reachability graph (--search=depth)
lola: state space: using reachability preserving stubborn set method with insertion algorithm (--stubborn=tarjan)
lola: RUNNING
lola: state equation: Generated DNF with 15 literals and 2 conjunctive subformulas
lola: state equation: write sara problem file to GPPP-PT-C0100N0000100000-ReachabilityFireability.sara
lola: state equation: calling and running sara
lola: SUBRESULT
lola: result: yes
lola: produced by: state space
lola: The predicate is reachable.
lola: 625 markings, 627 edges
lola: ========================================
lola: subprocess 1 will run for 236 seconds at most (--localtimelimit=-1)
lola: ========================================
lola: ...considering subproblem: E (F (((NOT FIREABLE(Ru5P_isomerase) OR NOT FIREABLE(Ru5P_epimerase)) AND FIREABLE(Pyruvate_kinase) AND FIREABLE(Glutathione_reductose))))
lola: ========================================
lola: SUBTASK
lola: checking reachability
lola: Planning: workflow for reachability check: stateequation||search (--findpath=off)
lola: STORE
lola: using a bit-perfect encoder (--encoder=bit)
lola: using 84 bytes per marking, with 0 unused bits
lola: using a prefix tree store (--store=prefix)
lola: SEARCH (state space)
lola: state space: using reachability graph (--search=depth)
lola: state space: using reachability preserving stubborn set method with insertion algorithm (--stubborn=tarjan)
lola: RUNNING
lola: state equation: Generated DNF with 20 literals and 4 conjunctive subformulas
lola: state equation: write sara problem file to GPPP-PT-C0100N0000100000-ReachabilityFireability.sara
lola: SUBRESULT
lola: result: yes
lola: produced by: state space
lola: The predicate is reachable.
lola: 18 markings, 17 edges
lola: ========================================
lola: state equation: calling and running sara
sara: try reading problem file GPPP-PT-C0100N0000100000-ReachabilityFireability.sara.
sara: place or transition ordering is non-deterministic
lola: subprocess 2 will run for 252 seconds at most (--localtimelimit=-1)
lola: ========================================
lola: ...considering subproblem: E (F (((FIREABLE(TIM_forward)) AND FIREABLE(G6P_dehydrogenase) AND FIREABLE(Pyruvate_kinase) AND (FIREABLE(Ru5P_isomerase) OR FIREABLE(Lactate_dehydrogenase)) AND ((FIREABLE(Phosphoglycerate_kinase) AND FIREABLE(Glutathione_oxidation)) OR NOT FIREABLE(Enolase) OR (FIREABLE(TIM_backward) AND FIREABLE(Enolase) AND (FIREABLE(remove) OR FIREABLE(Phosphoglycerate_kinase)))))))
lola: ========================================
lola: SUBTASK
lola: checking reachability
lola: Planning: workflow for reachability check: stateequation||search (--findpath=off)
lola: STORE
lola: using a bit-perfect encoder (--encoder=bit)
lola: using 84 bytes per marking, with 0 unused bits
lola: using a prefix tree store (--store=prefix)
lola: SEARCH (state space)
lola: state space: using reachability graph (--search=depth)
lola: state space: using reachability preserving stubborn set method with insertion algorithm (--stubborn=tarjan)
lola: RUNNING
lola: state equation: Generated DNF with 88 literals and 8 conjunctive subformulas

lola: state equation: write sara problem file to GPPP-PT-C0100N0000100000-ReachabilityFireability-2.sara
lola: SUBRESULT
lola: result: yes
lola: produced by: state space
lola: The predicate is reachable.
lola: 618 markings, 617 edges
lola: subprocess 3 will run for 272 seconds at most (--localtimelimit=-1)
lola: ========================================
lola: ...considering subproblem: E (F ((NOT FIREABLE(GAP_dehydrogenase) AND NOT FIREABLE(Transaldolase) AND (NOT FIREABLE(Enolase) OR NOT FIREABLE(Transaldolase)) AND FIREABLE(Pyruvate_kinase))))
lola: ========================================
lola: SUBTASK
lola: checking reachability
lola: Planning: workflow for reachability check: stateequation||search (--findpath=off)
lola: STORE
lola: using a bit-perfect encoder (--encoder=bit)
lola: using 84 bytes per marking, with 0 unused bits
lola: using a prefix tree store (--store=prefix)
lola: SEARCH (state space)
lola: state space: using reachability graph (--search=depth)
lola: state space: using reachability preserving stubborn set method with insertion algorithm (--stubborn=tarjan)
lola: RUNNING
lola: ========================================
lola: state equation: Generated DNF with 240 literals and 48 conjunctive subformulas
lola: state equation: calling and running sara
lola: state equation: write sara problem file to GPPP-PT-C0100N0000100000-ReachabilityFireability-3.sara
lola: SUBRESULT
lola: result: yes
lola: produced by: state space
lola: The predicate is reachable.
lola: 23 markings, 24 edges
sara: try reading problem file GPPP-PT-C0100N0000100000-ReachabilityFireability-2.sara.
sara: place or transition ordering is non-deterministic
lola: subprocess 4 will run for 295 seconds at most (--localtimelimit=-1)
lola: ========================================
lola: ...considering subproblem: E (F ((FIREABLE(Transaldolase) AND FIREABLE(Ru5P_isomerase) AND FIREABLE(generate) AND NOT FIREABLE(remove) AND NOT FIREABLE(Phosphoglycerate_mutase) AND FIREABLE(Enolase) AND (FIREABLE(Phosphoglucose_isomerase) OR FIREABLE(Aldolase) OR FIREABLE(Ru5P_epimerase)))))
lola: ========================================
lola: SUBTASK
lola: checking reachability
lola: Planning: workflow for reachability check: stateequation||search (--findpath=off)
lola: STORE
lola: using a bit-perfect encoder (--encoder=bit)
lola: using 84 bytes per marking, with 0 unused bits
lola: using a prefix tree store (--store=prefix)
lola: SEARCH (state space)
lola: state space: using reachability graph (--search=depth)
lola: state space: using reachability preserving stubborn set method with insertion algorithm (--stubborn=tarjan)
lola: RUNNING
lola: ========================================
lola: state equation: Generated DNF with 64 literals and 6 conjunctive subformulas
lola: state equation: write sara problem file to GPPP-PT-C0100N0000100000-ReachabilityFireability-4.sara
lola: state equation: calling and running sara
sara: try reading problem file GPPP-PT-C0100N0000100000-ReachabilityFireability-4.sara.
sara: place or transition ordering is non-deterministic

lola: sara is running 0 secs || 3029205 markings, 7543123 edges, 605841 markings/sec, 0 secs
lola: sara is running 5 secs || 6115307 markings, 15161665 edges, 617220 markings/sec, 5 secs
lola: sara is running 10 secs || 9138959 markings, 22591451 edges, 604730 markings/sec, 10 secs
lola: sara is running 15 secs || 12241981 markings, 30205451 edges, 620604 markings/sec, 15 secs
lola: sara is running 20 secs || 15250590 markings, 37555840 edges, 601722 markings/sec, 20 secs
lola: sara is running 25 secs || 17945231 markings, 44151997 edges, 538928 markings/sec, 25 secs
lola: sara is running 30 secs || 20982809 markings, 51569236 edges, 607516 markings/sec, 30 secs
lola: sara is running 35 secs || 24009075 markings, 58951956 edges, 605253 markings/sec, 35 secs
lola: sara is running 40 secs || 27001870 markings, 66260134 edges, 598559 markings/sec, 40 secs
lola: sara is running 45 secs || 29936978 markings, 73396579 edges, 587022 markings/sec, 45 secs
lola: sara is running 50 secs || 32880373 markings, 80561056 edges, 588679 markings/sec, 50 secs
lola: sara is running 55 secs || 35688346 markings, 87399839 edges, 561595 markings/sec, 55 secs
lola: sara is running 60 secs || 38339453 markings, 93852714 edges, 530221 markings/sec, 60 secs
lola: sara is running 65 secs || 41157081 markings, 100698434 edges, 563526 markings/sec, 65 secs
lola: sara is running 70 secs || 43861718 markings, 107280384 edges, 540927 markings/sec, 70 secs
lola: sara is running 75 secs || 46614057 markings, 113973282 edges, 550468 markings/sec, 75 secs
lola: sara is running 80 secs || 49415296 markings, 120768526 edges, 560248 markings/sec, 80 secs
lola: sara is running 85 secs || 52293728 markings, 127747984 edges, 575686 markings/sec, 85 secs
lola: sara is running 90 secs || 55027615 markings, 134386092 edges, 546777 markings/sec, 90 secs
lola: sara is running 95 secs || 57721450 markings, 140924123 edges, 538767 markings/sec, 95 secs
lola: sara is running 100 secs || 60493606 markings, 147652659 edges, 554431 markings/sec, 100 secs
lola: sara is running 105 secs || 63275926 markings, 154409651 edges, 556464 markings/sec, 105 secs
lola: sara is running 110 secs || 65581181 markings, 160014608 edges, 461051 markings/sec, 110 secs
lola: sara is running 115 secs || 68258218 markings, 166498324 edges, 535407 markings/sec, 115 secs
lola: sara is running 120 secs || 70932304 markings, 172983609 edges, 534817 markings/sec, 120 secs
lola: sara is running 125 secs || 73711584 markings, 179740232 edges, 555856 markings/sec, 125 secs
lola: sara is running 130 secs || 76387029 markings, 186193761 edges, 535089 markings/sec, 130 secs
lola: sara is running 135 secs || 79229449 markings, 193097182 edges, 568484 markings/sec, 135 secs
lola: sara is running 140 secs || 81925884 markings, 199638678 edges, 539287 markings/sec, 140 secs
lola: sara is running 145 secs || 84633611 markings, 206188180 edges, 541545 markings/sec, 145 secs
lola: sara is running 150 secs || 87334816 markings, 212738794 edges, 540241 markings/sec, 150 secs
lola: sara is running 155 secs || 90134747 markings, 219514368 edges, 559986 markings/sec, 155 secs
lola: sara is running 160 secs || 92801181 markings, 225977087 edges, 533287 markings/sec, 160 secs
lola: sara is running 165 secs || 95500373 markings, 232522546 edges, 539838 markings/sec, 165 secs
lola: sara is running 170 secs || 98155421 markings, 238925743 edges, 531010 markings/sec, 170 secs
lola: sara is running 175 secs || 100904880 markings, 245602361 edges, 549892 markings/sec, 175 secs
lola: sara is running 180 secs || 103860395 markings, 252750477 edges, 591103 markings/sec, 180 secs
lola: sara is running 185 secs || 106720832 markings, 259654495 edges, 572087 markings/sec, 185 secs
lola: sara is running 190 secs || 109500164 markings, 266407654 edges, 555866 markings/sec, 190 secs
lola: sara is running 195 secs || 112330649 markings, 273250059 edges, 566097 markings/sec, 195 secs
lola: sara is running 200 secs || 115098868 markings, 279927585 edges, 553644 markings/sec, 200 secs
lola: sara is running 205 secs || 117876073 markings, 286667084 edges, 555441 markings/sec, 205 secs
lola: sara is running 210 secs || 120518680 markings, 293047026 edges, 528521 markings/sec, 210 secs
lola: sara is running 215 secs || 123269610 markings, 299719667 edges, 550186 markings/sec, 215 secs
lola: sara is running 220 secs || 125819837 markings, 305884481 edges, 510045 markings/sec, 220 secs
lola: sara is running 225 secs || 128466812 markings, 312278416 edges, 529395 markings/sec, 225 secs
lola: sara is running 230 secs || 131019926 markings, 318445855 edges, 510623 markings/sec, 230 secs
lola: sara is running 235 secs || 133594121 markings, 324665662 edges, 514839 markings/sec, 235 secs
lola: sara is running 240 secs || 136177610 markings, 330908242 edges, 516698 markings/sec, 240 secs
lola: sara is running 245 secs || 138882678 markings, 337440494 edges, 541014 markings/sec, 245 secs
lola: sara is running 250 secs || 141602982 markings, 344031925 edges, 544061 markings/sec, 250 secs
lola: sara is running 255 secs || 144176006 markings, 350239452 edges, 514605 markings/sec, 255 secs
lola: sara is running 260 secs || 146992632 markings, 357070347 edges, 563325 markings/sec, 260 secs
lola: sara is running 265 secs || 149681719 markings, 363548370 edges, 537817 markings/sec, 265 secs
lola: sara is running 270 secs || 152485477 markings, 370349383 edges, 560752 markings/sec, 270 secs
lola: sara is running 275 secs || 155106693 markings, 376658180 edges, 524243 markings/sec, 275 secs
make: [verify] Error 134 (ignored)
lola: sara is running 280 secs || 157821817 markings, 383242814 edges, 543025 markings/sec, 280 secs
lola: sara is running 285 secs || 160396874 markings, 389442169 edges, 515011 markings/sec, 285 secs
lola: local time limit reached - aborting
lola: Child process aborted or communication problem between parent and child process
lola: subprocess 5 will run for 295 seconds at most (--localtimelimit=-1)
lola: ========================================
lola: ...considering subproblem: E (F ((FIREABLE(Lactate_dehydrogenase) AND FIREABLE(Transketolase2))))
lola: ========================================
lola: SUBTASK
lola: checking reachability
lola: Planning: workflow for reachability check: stateequation||search (--findpath=off)
lola: STORE
lola: using a bit-perfect encoder (--encoder=bit)
lola: using 84 bytes per marking, with 0 unused bits
lola: using a prefix tree store (--store=prefix)
lola: SEARCH (state space)
lola: state space: using reachability graph (--search=depth)
lola: state space: using reachability preserving stubborn set method with insertion algorithm (--stubborn=tarjan)
lola: RUNNING
lola: state equation: Generated DNF with 4 literals and 1 conjunctive subformulas
lola: state equation: write sara problem file to GPPP-PT-C0100N0000100000-ReachabilityFireability-5.sara
----- Start make result stderr -----
----- Kill lola and sara stderr -----
----- Finished stderr -----
lola: state equation: calling and running sara
lola: SUBRESULT
lola: result: yes
lola: produced by: state space
lola: The predicate is reachable.
lola: 22 markings, 21 edges
lola: ========================================
lola: subprocess 6 will run for 324 seconds at most (--localtimelimit=-1)
lola: ========================================
lola: ...considering subproblem: A (G ((FIREABLE(Aldolase) OR FIREABLE(Transketolase2) OR NOT FIREABLE(Lactate_dehydrogenase))))
lola: ========================================
lola: SUBTASK
lola: checking invariance
lola: Planning: workflow for reachability check: stateequation||search (--findpath=off)
lola: STORE
lola: using a bit-perfect encoder (--encoder=bit)
lola: using 84 bytes per marking, with 0 unused bits
lola: using a prefix tree store (--store=prefix)
lola: SEARCH (state space)
lola: state space: using reachability graph (--search=depth)
lola: state space: using reachability preserving stubborn set method with insertion algorithm (--stubborn=tarjan)
lola: RUNNING
lola: state equation: Generated DNF with 8 literals and 2 conjunctive subformulas
lola: SUBRESULT
lola: result: no
lola: produced by: state space
lola: The predicate is not invariant.
lola: 19 markings, 18 edges
lola: state equation: write sara problem file to GPPP-PT-C0100N0000100000-ReachabilityFireability-6.sara
lola: state equation: calling and running sara
lola: ========================================
sara: try reading problem file GPPP-PT-C0100N0000100000-ReachabilityFireability-6.sara.
lola: subprocess 7 will run for 360 seconds at most (--localtimelimit=-1)
sara: place or transition ordering is non-deterministic
lola: ========================================
lola: ...considering subproblem: A (G ((NOT FIREABLE(Pyruvate_kinase) OR NOT FIREABLE(Hexokinase) OR FIREABLE(Glutathione_oxidation) OR (NOT FIREABLE(Glutathione_oxidation) AND FIREABLE(Hexokinase)))))
lola: ========================================
lola: SUBTASK
lola: checking invariance
lola: Planning: workflow for reachability check: stateequation||search (--findpath=off)
lola: STORE
lola: using a bit-perfect encoder (--encoder=bit)
lola: using 84 bytes per marking, with 0 unused bits
lola: using a prefix tree store (--store=prefix)
lola: SEARCH (state space)
lola: state space: using reachability graph (--search=depth)
lola: state space: using reachability preserving stubborn set method with insertion algorithm (--stubborn=tarjan)
lola: RUNNING
lola: state equation: Generated DNF with 6 literals and 1 conjunctive subformulas

lola: state equation: write sara problem file to GPPP-PT-C0100N0000100000-ReachabilityFireability-7.sara
lola: state equation: calling and running sara
sara: try reading problem file GPPP-PT-C0100N0000100000-ReachabilityFireability-7.sara.
sara: place or transition ordering is non-deterministic

lola: state equation: solution impossible
lola: SUBRESULT
lola: result: yes
lola: produced by: state equation
lola: The predicate is invariant.
lola: ========================================
lola: subprocess 8 will run for 405 seconds at most (--localtimelimit=-1)
lola: ========================================
lola: ...considering subproblem: A (G ((NOT FIREABLE(Ru5P_isomerase) OR NOT FIREABLE(Transaldolase))))
lola: ========================================
lola: SUBTASK
lola: checking invariance
lola: Planning: workflow for reachability check: stateequation||search (--findpath=off)
lola: STORE
lola: using a bit-perfect encoder (--encoder=bit)
lola: using 84 bytes per marking, with 0 unused bits
lola: using a prefix tree store (--store=prefix)
lola: SEARCH (state space)
lola: state space: using reachability graph (--search=depth)
lola: state space: using reachability preserving stubborn set method with insertion algorithm (--stubborn=tarjan)
lola: RUNNING
lola: state equation: Generated DNF with 5 literals and 1 conjunctive subformulas
lola: SUBRESULT
lola: result: no
lola: produced by: state space
lola: The predicate is not invariant.
lola: 612 markings, 611 edges
lola: state equation: write sara problem file to GPPP-PT-C0100N0000100000-ReachabilityFireability-8.sara
lola: ========================================
lola: subprocess 9 will run for 463 seconds at most (--localtimelimit=-1)
lola: ========================================
lola: ...considering subproblem: E (F (FIREABLE(remove)))
lola: ========================================
lola: SUBTASK
lola: checking reachability
lola: Planning: workflow for reachability check: stateequation||search (--findpath=off)
lola: STORE
lola: using a bit-perfect encoder (--encoder=bit)
lola: using 84 bytes per marking, with 0 unused bits
lola: using a prefix tree store (--store=prefix)
lola: SEARCH (state space)
lola: state space: using reachability graph (--search=depth)
lola: state space: using reachability preserving stubborn set method with insertion algorithm (--stubborn=tarjan)
lola: RUNNING
lola: state equation: Generated DNF with 2 literals and 1 conjunctive subformulas
lola: state equation: write sara problem file to GPPP-PT-C0100N0000100000-ReachabilityFireability-9.sara
lola: state equation: calling and running sara
sara: try reading problem file GPPP-PT-C0100N0000100000-ReachabilityFireability-9.sara.
sara: place or transition ordering is non-deterministic

lola: state equation: solution impossible
lola: SUBRESULT
lola: result: no
lola: produced by: state equation
lola: The predicate is unreachable.
lola: ========================================
lola: subprocess 10 will run for 540 seconds at most (--localtimelimit=-1)
lola: ========================================
lola: ...considering subproblem: E (F (FIREABLE(remove)))
lola: ========================================
lola: SUBTASK
lola: checking reachability
lola: Planning: workflow for reachability check: stateequation||search (--findpath=off)
lola: STORE
lola: using a bit-perfect encoder (--encoder=bit)
lola: using 84 bytes per marking, with 0 unused bits
lola: using a prefix tree store (--store=prefix)
lola: SEARCH (state space)
lola: state space: using reachability graph (--search=depth)
lola: state space: using reachability preserving stubborn set method with insertion algorithm (--stubborn=tarjan)
lola: RUNNING
lola: state equation: Generated DNF with 2 literals and 1 conjunctive subformulas
lola: state equation: write sara problem file to GPPP-PT-C0100N0000100000-ReachabilityFireability-10.sara
lola: state equation: calling and running sara
sara: try reading problem file GPPP-PT-C0100N0000100000-ReachabilityFireability-10.sara.
sara: place or transition ordering is non-deterministic

lola: state equation: solution impossible
lola: SUBRESULT
lola: result: no
lola: produced by: state equation
lola: The predicate is unreachable.
lola: ========================================
lola: subprocess 11 will run for 648 seconds at most (--localtimelimit=-1)
lola: ========================================
lola: ...considering subproblem: E (F (((NOT FIREABLE(G6P_dehydrogenase)) AND FIREABLE(Lactate_dehydrogenase) AND ((FIREABLE(Transketolase2)) OR FIREABLE(generate)) AND (NOT FIREABLE(G6P_dehydrogenase) OR NOT FIREABLE(Transketolase1)))))
lola: ========================================
lola: SUBTASK
lola: checking reachability
lola: Planning: workflow for reachability check: stateequation||search (--findpath=off)
lola: STORE
lola: using a bit-perfect encoder (--encoder=bit)
lola: using 84 bytes per marking, with 0 unused bits
lola: using a prefix tree store (--store=prefix)
lola: SEARCH (state space)
lola: state space: using reachability graph (--search=depth)
lola: state space: using reachability preserving stubborn set method with insertion algorithm (--stubborn=tarjan)
lola: RUNNING
lola: state equation: Generated DNF with 147 literals and 27 conjunctive subformulas
lola: state equation: write sara problem file to GPPP-PT-C0100N0000100000-ReachabilityFireability-11.sara
lola: state equation: calling and running sara
sara: try reading problem file GPPP-PT-C0100N0000100000-ReachabilityFireability-11.sara.
sara: place or transition ordering is non-deterministic
lola: sara is running 0 secs || 4700180 markings, 8439134 edges, 940036 markings/sec, 0 secs
lola: sara is running 5 secs || 9126531 markings, 16557306 edges, 885270 markings/sec, 5 secs
lola: sara is running 10 secs || 14034210 markings, 25429051 edges, 981536 markings/sec, 10 secs
lola: sara is running 15 secs || 18751080 markings, 33917897 edges, 943374 markings/sec, 15 secs
lola: sara is running 20 secs || 22581516 markings, 41742575 edges, 766087 markings/sec, 20 secs
lola: sara is running 25 secs || 26385738 markings, 49163059 edges, 760844 markings/sec, 25 secs
lola: sara is running 30 secs || 30148563 markings, 56339639 edges, 752565 markings/sec, 30 secs
lola: sara is running 35 secs || 34282078 markings, 64691855 edges, 826703 markings/sec, 35 secs
lola: sara is running 40 secs || 39187401 markings, 73510554 edges, 981065 markings/sec, 40 secs
lola: sara is running 45 secs || 43999921 markings, 82129634 edges, 962504 markings/sec, 45 secs
lola: sara is running 50 secs || 48718387 markings, 90547969 edges, 943693 markings/sec, 50 secs
lola: sara is running 55 secs || 53359923 markings, 98806692 edges, 928307 markings/sec, 55 secs
lola: sara is running 60 secs || 57982545 markings, 107082484 edges, 924524 markings/sec, 60 secs
lola: sara is running 65 secs || 61357379 markings, 114742464 edges, 674967 markings/sec, 65 secs
lola: sara is running 70 secs || 65007536 markings, 122103567 edges, 730031 markings/sec, 70 secs
lola: sara is running 75 secs || 68638839 markings, 129416720 edges, 726261 markings/sec, 75 secs
lola: sara is running 80 secs || 72326308 markings, 136533960 edges, 737494 markings/sec, 80 secs
lola: sara is running 85 secs || 75900745 markings, 143492086 edges, 714887 markings/sec, 85 secs
lola: sara is running 90 secs || 79645935 markings, 150851362 edges, 749038 markings/sec, 90 secs
lola: sara is running 95 secs || 83399844 markings, 158012999 edges, 750782 markings/sec, 95 secs
lola: sara is running 100 secs || 86485198 markings, 165312304 edges, 617071 markings/sec, 100 secs
lola: sara is running 105 secs || 90248711 markings, 172836358 edges, 752703 markings/sec, 105 secs
lola: sara is running 110 secs || 93758422 markings, 180104074 edges, 701942 markings/sec, 110 secs
lola: sara is running 115 secs || 97447170 markings, 187347582 edges, 737750 markings/sec, 115 secs
lola: sara is running 120 secs || 101130332 markings, 194814810 edges, 736632 markings/sec, 120 secs
lola: sara is running 125 secs || 104712277 markings, 201865685 edges, 716389 markings/sec, 125 secs
lola: sara is running 130 secs || 109411789 markings, 206875394 edges, 939902 markings/sec, 130 secs
lola: sara is running 135 secs || 113043737 markings, 210932515 edges, 726390 markings/sec, 135 secs
lola: sara is running 140 secs || 117351317 markings, 215912605 edges, 861516 markings/sec, 140 secs
lola: sara is running 145 secs || 121932090 markings, 220821119 edges, 916155 markings/sec, 145 secs
lola: sara is running 150 secs || 126017899 markings, 225277473 edges, 817162 markings/sec, 150 secs
lola: sara is running 155 secs || 129120980 markings, 229227583 edges, 620616 markings/sec, 155 secs
lola: sara is running 160 secs || 132245465 markings, 232853915 edges, 624897 markings/sec, 160 secs
lola: sara is running 165 secs || 135808430 markings, 236962150 edges, 712593 markings/sec, 165 secs
lola: sara is running 170 secs || 139449859 markings, 241321923 edges, 728286 markings/sec, 170 secs
lola: sara is running 175 secs || 143002152 markings, 245354622 edges, 710459 markings/sec, 175 secs
lola: sara is running 180 secs || 146140125 markings, 249283833 edges, 627595 markings/sec, 180 secs
lola: sara is running 185 secs || 149289078 markings, 252929901 edges, 629791 markings/sec, 185 secs
lola: sara is running 190 secs || 152329295 markings, 256795729 edges, 608043 markings/sec, 190 secs
lola: sara is running 195 secs || 155471910 markings, 260448886 edges, 628523 markings/sec, 195 secs
lola: sara is running 200 secs || 158973429 markings, 264326911 edges, 700304 markings/sec, 200 secs
lola: sara is running 205 secs || 162285175 markings, 268473055 edges, 662349 markings/sec, 205 secs
lola: sara is running 210 secs || 165759208 markings, 272379090 edges, 694807 markings/sec, 210 secs
lola: sara is running 215 secs || 168655879 markings, 275904009 edges, 579334 markings/sec, 215 secs
lola: sara is running 220 secs || 171389257 markings, 279426724 edges, 546676 markings/sec, 220 secs
lola: sara is running 225 secs || 173876366 markings, 282400479 edges, 497422 markings/sec, 225 secs
lola: sara is running 230 secs || 176144577 markings, 285383884 edges, 453642 markings/sec, 230 secs
lola: sara is running 235 secs || 176149530 markings, 285389764 edges, 991 markings/sec, 235 secs
lola: sara is running 240 secs || 176160982 markings, 285403031 edges, 2290 markings/sec, 240 secs
lola: sara is running 245 secs || 176163791 markings, 285406254 edges, 562 markings/sec, 245 secs
lola: sara is running 250 secs || 176163809 markings, 285406273 edges, 4 markings/sec, 250 secs
lola: sara is running 255 secs || 176163831 markings, 285406294 edges, 4 markings/sec, 255 secs
lola: sara is running 260 secs || 176171048 markings, 285414107 edges, 1443 markings/sec, 260 secs
lola: sara is running 265 secs || 176171074 markings, 285414137 edges, 5 markings/sec, 265 secs
lola: sara is running 270 secs || 176173074 markings, 285416262 edges, 400 markings/sec, 270 secs
lola: sara is running 275 secs || 176182036 markings, 285427123 edges, 1792 markings/sec, 275 secs
lola: sara is running 280 secs || 176186311 markings, 285431713 edges, 855 markings/sec, 280 secs
lola: sara is running 285 secs || 176186325 markings, 285431729 edges, 3 markings/sec, 285 secs
lola: sara is running 290 secs || 176186337 markings, 285431741 edges, 2 markings/sec, 290 secs
lola: sara is running 295 secs || 176186353 markings, 285431758 edges, 3 markings/sec, 295 secs
lola: sara is running 300 secs || 176186366 markings, 285431771 edges, 3 markings/sec, 300 secs
lola: sara is running 305 secs || 176186379 markings, 285431784 edges, 3 markings/sec, 305 secs
lola: sara is running 310 secs || 176197620 markings, 285445075 edges, 2248 markings/sec, 310 secs
lola: sara is running 315 secs || 176197668 markings, 285445128 edges, 10 markings/sec, 315 secs
lola: sara is running 320 secs || 176203291 markings, 285451148 edges, 1125 markings/sec, 320 secs
lola: sara is running 325 secs || 176203314 markings, 285451172 edges, 5 markings/sec, 325 secs
lola: Child process aborted or communication problem between parent and child process
terminate called after throwing an instance of 'std::runtime_error'
what(): parse error at position 0: unexpected character, last read: '`'
Aborted (core dumped)
FORMULA GPPP-PT-C0100N0000100000-ReachabilityFireability-0 CANNOT_COMPUTE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS TOPOLOGICAL USE_NUPN
FORMULA GPPP-PT-C0100N0000100000-ReachabilityFireability-1 CANNOT_COMPUTE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS TOPOLOGICAL USE_NUPN
FORMULA GPPP-PT-C0100N0000100000-ReachabilityFireability-2 CANNOT_COMPUTE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS TOPOLOGICAL USE_NUPN
FORMULA GPPP-PT-C0100N0000100000-ReachabilityFireability-3 CANNOT_COMPUTE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS TOPOLOGICAL USE_NUPN
FORMULA GPPP-PT-C0100N0000100000-ReachabilityFireability-4 CANNOT_COMPUTE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS TOPOLOGICAL USE_NUPN
FORMULA GPPP-PT-C0100N0000100000-ReachabilityFireability-5 CANNOT_COMPUTE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS TOPOLOGICAL USE_NUPN
FORMULA GPPP-PT-C0100N0000100000-ReachabilityFireability-6 CANNOT_COMPUTE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS TOPOLOGICAL USE_NUPN
FORMULA GPPP-PT-C0100N0000100000-ReachabilityFireability-7 CANNOT_COMPUTE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS TOPOLOGICAL USE_NUPN
FORMULA GPPP-PT-C0100N0000100000-ReachabilityFireability-8 CANNOT_COMPUTE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS TOPOLOGICAL USE_NUPN
FORMULA GPPP-PT-C0100N0000100000-ReachabilityFireability-9 CANNOT_COMPUTE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS TOPOLOGICAL USE_NUPN
FORMULA GPPP-PT-C0100N0000100000-ReachabilityFireability-10 CANNOT_COMPUTE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS TOPOLOGICAL USE_NUPN
FORMULA GPPP-PT-C0100N0000100000-ReachabilityFireability-11 CANNOT_COMPUTE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS TOPOLOGICAL USE_NUPN
FORMULA GPPP-PT-C0100N0000100000-ReachabilityFireability-12 CANNOT_COMPUTE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS TOPOLOGICAL USE_NUPN
FORMULA GPPP-PT-C0100N0000100000-ReachabilityFireability-13 CANNOT_COMPUTE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS TOPOLOGICAL USE_NUPN
FORMULA GPPP-PT-C0100N0000100000-ReachabilityFireability-14 CANNOT_COMPUTE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS TOPOLOGICAL USE_NUPN
FORMULA GPPP-PT-C0100N0000100000-ReachabilityFireability-15 CANNOT_COMPUTE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT STATE_COMPRESSION STUBBORN_SETS TOPOLOGICAL USE_NUPN
----- Kill lola and sara stdout -----
----- Finished stdout -----

Sequence of Actions to be Executed by the VM

This is useful if one wants to reexecute the tool in the VM from the submitted image disk.

set -x
# this is for BenchKit: configuration of major elements for the test
export BK_INPUT="GPPP-PT-C0100N0000100000"
export BK_EXAMINATION="ReachabilityFireability"
export BK_TOOL="irma4mcc-full"
export BK_RESULT_DIR="/tmp/BK_RESULTS/OUTPUTS"
export BK_TIME_CONFINEMENT="3600"
export BK_MEMORY_CONFINEMENT="16384"

# this is specific to your benchmark or test

export BIN_DIR="$HOME/BenchKit/bin"

# remove the execution directoty if it exists (to avoid increse of .vmdk images)
if [ -d execution ] ; then
rm -rf execution
fi

tar xzf /home/mcc/BenchKit/INPUTS/GPPP-PT-C0100N0000100000.tgz
mv GPPP-PT-C0100N0000100000 execution
cd execution
pwd
ls -lh

# this is for BenchKit: explicit launching of the test
echo "====================================================================="
echo " Generated by BenchKit 2-3637"
echo " Executing tool irma4mcc-full"
echo " Input is GPPP-PT-C0100N0000100000, examination is ReachabilityFireability"
echo " Time confinement is $BK_TIME_CONFINEMENT seconds"
echo " Memory confinement is 16384 MBytes"
echo " Number of cores is 4"
echo " Run identifier is r090-blw7-152650001400336"
echo "====================================================================="
echo
echo "--------------------"
echo "content from stdout:"
echo
echo "=== Data for post analysis generated by BenchKit (invocation template)"
echo
if [ "ReachabilityFireability" = "UpperBounds" ] ; then
echo "The expected result is a vector of positive values"
echo NUM_VECTOR
elif [ "ReachabilityFireability" != "StateSpace" ] ; then
echo "The expected result is a vector of booleans"
echo BOOL_VECTOR
else
echo "no data necessary for post analysis"
fi
echo
if [ -f "ReachabilityFireability.txt" ] ; then
echo "here is the order used to build the result vector(from text file)"
for x in $(grep Property ReachabilityFireability.txt | cut -d ' ' -f 2 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ -f "ReachabilityFireability.xml" ] ; then # for cunf (txt files deleted;-)
echo echo "here is the order used to build the result vector(from xml file)"
for x in $(grep '' ReachabilityFireability.xml | cut -d '>' -f 2 | cut -d '<' -f 1 | sort -u) ; do
echo "FORMULA_NAME $x"
done
fi
echo
echo "=== Now, execution of the tool begins"
echo
echo -n "BK_START "
date -u +%s%3N
echo
timeout -s 9 $BK_TIME_CONFINEMENT bash -c "/home/mcc/BenchKit/BenchKit_head.sh 2> STDERR ; echo ; echo -n \"BK_STOP \" ; date -u +%s%3N"
if [ $? -eq 137 ] ; then
echo
echo "BK_TIME_CONFINEMENT_REACHED"
fi
echo
echo "--------------------"
echo "content from stderr:"
echo
cat STDERR ;