Execution Chart

We display below the execution chart for this examination (boot time has been removed).

Trace from the execution

Waiting for the VM to be ready (probing ssh)
................
/home/mcc/execution
total 192K
-rw-r--r-- 1 mcc users 3.2K May 15 18:54 CTLCardinality.txt
-rw-r--r-- 1 mcc users 17K May 15 18:54 CTLCardinality.xml
-rw-r--r-- 1 mcc users 3.3K May 15 18:54 CTLFireability.txt
-rw-r--r-- 1 mcc users 18K May 15 18:54 CTLFireability.xml
-rw-r--r-- 1 mcc users 4.0K May 15 18:50 GenericPropertiesDefinition.xml
-rw-r--r-- 1 mcc users 5.7K May 15 18:50 GenericPropertiesVerdict.xml
-rw-r--r-- 1 mcc users 2.5K May 15 18:54 LTLCardinality.txt
-rw-r--r-- 1 mcc users 12K May 15 18:54 LTLCardinality.xml
-rw-r--r-- 1 mcc users 2.4K May 15 18:54 LTLFireability.txt
-rw-r--r-- 1 mcc users 12K May 15 18:54 LTLFireability.xml
-rw-r--r-- 1 mcc users 3.9K May 15 18:54 ReachabilityCardinality.txt
-rw-r--r-- 1 mcc users 20K May 15 18:54 ReachabilityCardinality.xml
-rw-r--r-- 1 mcc users 115 May 15 18:54 ReachabilityDeadlock.txt
-rw-r--r-- 1 mcc users 353 May 15 18:54 ReachabilityDeadlock.xml
-rw-r--r-- 1 mcc users 3.4K May 15 18:54 ReachabilityFireability.txt
-rw-r--r-- 1 mcc users 17K May 15 18:54 ReachabilityFireability.xml
-rw-r--r-- 1 mcc users 1.7K May 15 18:54 UpperBounds.txt
-rw-r--r-- 1 mcc users 3.8K May 15 18:54 UpperBounds.xml
-rw-r--r-- 1 mcc users 6 May 15 18:50 equiv_col
-rw-r--r-- 1 mcc users 17 May 15 18:50 instance
-rw-r--r-- 1 mcc users 6 May 15 18:50 iscolored
-rw-r--r-- 1 mcc users 21K May 15 18:50 model.pnml
=====================================================================
Generated by BenchKit 2-3637
Executing tool lola
Input is GPPP-PT-C1000N0000000010, examination is CTLFireability
Time confinement is 3600 seconds
Memory confinement is 16384 MBytes
Number of cores is 4
Run identifier is r088-blw7-152649998400340
=====================================================================

--------------------
content from stdout:

=== Data for post analysis generated by BenchKit (invocation template)

The expected result is a vector of booleans
BOOL_VECTOR

here is the order used to build the result vector(from text file)
FORMULA_NAME GPPP-PT-C1000N0000000010-CTLFireability-00
FORMULA_NAME GPPP-PT-C1000N0000000010-CTLFireability-01
FORMULA_NAME GPPP-PT-C1000N0000000010-CTLFireability-02
FORMULA_NAME GPPP-PT-C1000N0000000010-CTLFireability-03
FORMULA_NAME GPPP-PT-C1000N0000000010-CTLFireability-04
FORMULA_NAME GPPP-PT-C1000N0000000010-CTLFireability-05
FORMULA_NAME GPPP-PT-C1000N0000000010-CTLFireability-06
FORMULA_NAME GPPP-PT-C1000N0000000010-CTLFireability-07
FORMULA_NAME GPPP-PT-C1000N0000000010-CTLFireability-08
FORMULA_NAME GPPP-PT-C1000N0000000010-CTLFireability-09
FORMULA_NAME GPPP-PT-C1000N0000000010-CTLFireability-10
FORMULA_NAME GPPP-PT-C1000N0000000010-CTLFireability-11
FORMULA_NAME GPPP-PT-C1000N0000000010-CTLFireability-12
FORMULA_NAME GPPP-PT-C1000N0000000010-CTLFireability-13
FORMULA_NAME GPPP-PT-C1000N0000000010-CTLFireability-14
FORMULA_NAME GPPP-PT-C1000N0000000010-CTLFireability-15

=== Now, execution of the tool begins

BK_START 1526748478960

info: Time: 3600 - MCC
===========================================================================================
prep: translating GPPP-PT-C1000N0000000010 Petri net model.pnml into LoLA format
===========================================================================================
prep: translating PT Petri net complete
prep: check for too many tokens
===========================================================================================
prep: translating GPPP-PT-C1000N0000000010 formula CTLFireability into LoLA format
===========================================================================================
prep: translating PT formula complete
vrfy: Checking CTLFireability @ GPPP-PT-C1000N0000000010 @ 3569 seconds
lola: LoLA will run for 3569 seconds at most (--timelimit)
lola: NET
lola: reading net from model.pnml.lola
lola: finished parsing
lola: closed net file model.pnml.lola
lola: 55/65536 symbol table entries, 0 collisions
lola: preprocessing...
lola: Size of bit vector: 1056
lola: finding significant places
lola: 33 places, 22 transitions, 21 significant places
lola: computing forward-conflicting sets
lola: computing back-conflicting sets
lola: 30 transition conflict sets
lola: TASK
lola: reading formula from GPPP-PT-C1000N0000000010-CTLFireability.task
lola: (((FIREABLE(Hexokinase) OR (FIREABLE(Transaldolase) AND FIREABLE(Ru5P_epimerase)) OR NOT FIREABLE(Transaldolase) OR (FIREABLE(remove) AND (NOT FIREABLE(remove) OR NOT FIREABLE(Transketolase1)))) AND E (X (E (X (FIREABLE(TIM_backward)))))) OR (E (F (E (G (FIREABLE(Phosphoclucose_isomerase))))) AND (A (F ((FIREABLE(TIM_forward) OR FIREABLE(TIM_backward)))) OR (FIREABLE(Hexokinase) AND FIREABLE(Phosphoglycerate_kinase))))) : E (G ((NOT(E (F (FIREABLE(remove)))) OR E (G ((FIREABLE(Ru5P_epimerase) OR FIREABLE(TIM_forward))))))) : (FIREABLE(Transketolase1) OR E (G (NOT FIREABLE(TIM_backward)))) : A ((FIREABLE(Lactate_dehydrogenase) U A (G (NOT FIREABLE(Lactate_dehydrogenase))))) : A (G (E (F (NOT FIREABLE(Ru5P_epimerase))))) : (A (F (E (F ((FIREABLE(Enolase) OR FIREABLE(Pyruvate_kinase)))))) OR E (F ((E (G (FIREABLE(GAP_dehydrogenase))) AND FIREABLE(Pyruvate_kinase))))) : A (G (E (G ((NOT FIREABLE(TIM_forward) OR NOT FIREABLE(generate)))))) : (A (G (E (F (NOT FIREABLE(Phosphofructokinase))))) AND E (X ((E (F (FIREABLE(Phosphofructokinase))) AND (NOT FIREABLE(GAP_dehydrogenase) AND NOT FIREABLE(Ru5P_epimerase)))))) : ((E (X (FIREABLE(TIM_backward))) OR (FIREABLE(Transaldolase) AND FIREABLE(Ru5P_epimerase) AND (FIREABLE(Ru5P_epimerase) OR FIREABLE(GAP_dehydrogenase)))) OR NOT(A ((NOT FIREABLE(Ru5P_epimerase) U FIREABLE(Phosphofructokinase))))) : NOT(E (F (A (G (NOT FIREABLE(generate)))))) : A (G (E (F (FIREABLE(Transketolase1))))) : E (X (A (G (E (F (FIREABLE(Phosphofructokinase))))))) : A (X (A (F ((FIREABLE(TIM_backward) OR FIREABLE(GAP_dehydrogenase)))))) : (NOT(E (F ((FIREABLE(Aldolase) AND FIREABLE(Transketolase2) AND FIREABLE(G6P_dehydrogenase))))) OR E (F (E (G ((FIREABLE(Phosphoclucose_isomerase) AND FIREABLE(Ru5P_isomerase))))))) : ((E (G ((NOT FIREABLE(remove) AND NOT FIREABLE(Phosphofructokinase)))) OR NOT(E (F (NOT FIREABLE(TIM_forward))))) OR (((FIREABLE(Hexokinase) AND E (G (FIREABLE(Phosphoglycerate_kinase)))) AND A (G ((FIREABLE(Hexokinase) OR FIREABLE(Phosphoglycerate_kinase))))) AND NOT(E (F (FIREABLE(TIM_backward)))))) : NOT((NOT(E (F (FIREABLE(Lactate_dehydrogenase)))) OR (FIREABLE(Transketolase2) AND ((NOT FIREABLE(Transaldolase) OR (FIREABLE(Glutathione_oxidation) AND FIREABLE(Phosphoclucose_isomerase))) OR A (G (FIREABLE(Lactate_dehydrogenase)))))))
lola: rewrite Frontend/Parser/formula_rewrite.k:326
lola: rewrite Frontend/Parser/formula_rewrite.k:332
lola: rewrite Frontend/Parser/formula_rewrite.k:297
lola: rewrite Frontend/Parser/formula_rewrite.k:449
lola: rewrite Frontend/Parser/formula_rewrite.k:458
lola: rewrite Frontend/Parser/formula_rewrite.k:323
lola: rewrite Frontend/Parser/formula_rewrite.k:338
lola: rewrite Frontend/Parser/formula_rewrite.k:297
lola: rewrite Frontend/Parser/formula_rewrite.k:297
lola: rewrite Frontend/Parser/formula_rewrite.k:254
lola: rewrite Frontend/Parser/formula_rewrite.k:326
lola: rewrite Frontend/Parser/formula_rewrite.k:332
lola: rewrite Frontend/Parser/formula_rewrite.k:323
lola: rewrite Frontend/Parser/formula_rewrite.k:329
lola: rewrite Frontend/Parser/formula_rewrite.k:297
lola: rewrite Frontend/Parser/formula_rewrite.k:326
lola: rewrite Frontend/Parser/formula_rewrite.k:332
lola: rewrite Frontend/Parser/formula_rewrite.k:297
lola: rewrite Frontend/Parser/formula_rewrite.k:326
lola: rewrite Frontend/Parser/formula_rewrite.k:332
lola: rewrite Frontend/Parser/formula_rewrite.k:297
lola: rewrite Frontend/Parser/formula_rewrite.k:251
lola: rewrite Frontend/Parser/formula_rewrite.k:326
lola: rewrite Frontend/Parser/formula_rewrite.k:332
lola: rewrite Frontend/Parser/formula_rewrite.k:297
lola: rewrite Frontend/Parser/formula_rewrite.k:251
lola: rewrite Frontend/Parser/formula_rewrite.k:251
lola: rewrite Frontend/Parser/formula_rewrite.k:254
lola: rewrite Frontend/Parser/formula_rewrite.k:326
lola: rewrite Frontend/Parser/formula_rewrite.k:332
lola: rewrite Frontend/Parser/formula_rewrite.k:297
lola: rewrite Frontend/Parser/formula_rewrite.k:318
lola: rewrite Frontend/Parser/formula_rewrite.k:323
lola: rewrite Frontend/Parser/formula_rewrite.k:329
lola: rewrite Frontend/Parser/formula_rewrite.k:300
lola: rewrite Frontend/Parser/formula_rewrite.k:315
lola: rewrite Frontend/Parser/formula_rewrite.k:297
lola: rewrite Frontend/Parser/formula_rewrite.k:318
lola: rewrite Frontend/Parser/formula_rewrite.k:297
lola: rewrite Frontend/Parser/formula_rewrite.k:323
lola: rewrite Frontend/Parser/formula_rewrite.k:329
lola: rewrite Frontend/Parser/formula_rewrite.k:297
lola: computing a collection of formulas
lola: RUNNING
lola: subprocess 0 will run for 223 seconds at most (--localtimelimit=0)
lola: ========================================
lola: ...considering subproblem: (((FIREABLE(Hexokinase) OR (FIREABLE(Transaldolase) AND FIREABLE(Ru5P_epimerase)) OR NOT FIREABLE(Transaldolase) OR (FIREABLE(remove) AND (NOT FIREABLE(remove) OR NOT FIREABLE(Transketolase1)))) AND E (X (E (X (FIREABLE(TIM_backward)))))) OR (E (F (E (G (FIREABLE(Phosphoclucose_isomerase))))) AND (A (F ((FIREABLE(TIM_forward) OR FIREABLE(TIM_backward)))) OR (FIREABLE(Hexokinase) AND FIREABLE(... (shortened)
lola: ========================================
lola: SUBTASK
lola: checking a Boolean combination of formulas
lola: RUNNING
lola: local time limit reached - aborting
lola:
preliminary result: unknown unknown unknown unknown unknown unknown unknown unknown unknown unknown unknown unknown unknown unknown unknown unknown
lola: caught signal User defined signal 1 - aborting LoLA
lola: memory consumption: 14260 KB
lola: time consumption: 223 seconds
lola: time limit reached - aborting
lola:
preliminary result: unknown unknown unknown unknown unknown unknown unknown unknown unknown unknown unknown unknown unknown unknown unknown unknown
lola: memory consumption: 14260 KB
lola: time consumption: 3569 seconds

BK_TIME_CONFINEMENT_REACHED

--------------------
content from stderr:

Sequence of Actions to be Executed by the VM

This is useful if one wants to reexecute the tool in the VM from the submitted image disk.

set -x
# this is for BenchKit: configuration of major elements for the test
export BK_INPUT="GPPP-PT-C1000N0000000010"
export BK_EXAMINATION="CTLFireability"
export BK_TOOL="lola"
export BK_RESULT_DIR="/tmp/BK_RESULTS/OUTPUTS"
export BK_TIME_CONFINEMENT="3600"
export BK_MEMORY_CONFINEMENT="16384"

# this is specific to your benchmark or test

export BIN_DIR="$HOME/BenchKit/bin"

# remove the execution directoty if it exists (to avoid increse of .vmdk images)
if [ -d execution ] ; then
rm -rf execution
fi

tar xzf /home/mcc/BenchKit/INPUTS/GPPP-PT-C1000N0000000010.tgz
mv GPPP-PT-C1000N0000000010 execution
cd execution
pwd
ls -lh

# this is for BenchKit: explicit launching of the test
echo "====================================================================="
echo " Generated by BenchKit 2-3637"
echo " Executing tool lola"
echo " Input is GPPP-PT-C1000N0000000010, examination is CTLFireability"
echo " Time confinement is $BK_TIME_CONFINEMENT seconds"
echo " Memory confinement is 16384 MBytes"
echo " Number of cores is 4"
echo " Run identifier is r088-blw7-152649998400340"
echo "====================================================================="
echo
echo "--------------------"
echo "content from stdout:"
echo
echo "=== Data for post analysis generated by BenchKit (invocation template)"
echo
if [ "CTLFireability" = "UpperBounds" ] ; then
echo "The expected result is a vector of positive values"
echo NUM_VECTOR
elif [ "CTLFireability" != "StateSpace" ] ; then
echo "The expected result is a vector of booleans"
echo BOOL_VECTOR
else
echo "no data necessary for post analysis"
fi
echo
if [ -f "CTLFireability.txt" ] ; then
echo "here is the order used to build the result vector(from text file)"
for x in $(grep Property CTLFireability.txt | cut -d ' ' -f 2 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ -f "CTLFireability.xml" ] ; then # for cunf (txt files deleted;-)
echo echo "here is the order used to build the result vector(from xml file)"
for x in $(grep '' CTLFireability.xml | cut -d '>' -f 2 | cut -d '<' -f 1 | sort -u) ; do
echo "FORMULA_NAME $x"
done
fi
echo
echo "=== Now, execution of the tool begins"
echo
echo -n "BK_START "
date -u +%s%3N
echo
timeout -s 9 $BK_TIME_CONFINEMENT bash -c "/home/mcc/BenchKit/BenchKit_head.sh 2> STDERR ; echo ; echo -n \"BK_STOP \" ; date -u +%s%3N"
if [ $? -eq 137 ] ; then
echo
echo "BK_TIME_CONFINEMENT_REACHED"
fi
echo
echo "--------------------"
echo "content from stderr:"
echo
cat STDERR ;