Execution Chart

We display below the execution chart for this examination (boot time has been removed).

Trace from the execution

Waiting for the VM to be ready (probing ssh)
................
/home/mcc/execution
total 204K
-rw-r--r-- 1 mcc users 3.5K May 15 18:54 CTLCardinality.txt
-rw-r--r-- 1 mcc users 19K May 15 18:54 CTLCardinality.xml
-rw-r--r-- 1 mcc users 2.8K May 15 18:54 CTLFireability.txt
-rw-r--r-- 1 mcc users 14K May 15 18:54 CTLFireability.xml
-rw-r--r-- 1 mcc users 4.0K May 15 18:50 GenericPropertiesDefinition.xml
-rw-r--r-- 1 mcc users 5.7K May 15 18:50 GenericPropertiesVerdict.xml
-rw-r--r-- 1 mcc users 2.4K May 15 18:54 LTLCardinality.txt
-rw-r--r-- 1 mcc users 11K May 15 18:54 LTLCardinality.xml
-rw-r--r-- 1 mcc users 2.3K May 15 18:54 LTLFireability.txt
-rw-r--r-- 1 mcc users 9.9K May 15 18:54 LTLFireability.xml
-rw-r--r-- 1 mcc users 4.1K May 15 18:54 ReachabilityCardinality.txt
-rw-r--r-- 1 mcc users 22K May 15 18:54 ReachabilityCardinality.xml
-rw-r--r-- 1 mcc users 115 May 15 18:54 ReachabilityDeadlock.txt
-rw-r--r-- 1 mcc users 353 May 15 18:54 ReachabilityDeadlock.xml
-rw-r--r-- 1 mcc users 4.1K May 15 18:54 ReachabilityFireability.txt
-rw-r--r-- 1 mcc users 21K May 15 18:54 ReachabilityFireability.xml
-rw-r--r-- 1 mcc users 1.7K May 15 18:54 UpperBounds.txt
-rw-r--r-- 1 mcc users 3.8K May 15 18:54 UpperBounds.xml
-rw-r--r-- 1 mcc users 6 May 15 18:50 equiv_col
-rw-r--r-- 1 mcc users 17 May 15 18:50 instance
-rw-r--r-- 1 mcc users 6 May 15 18:50 iscolored
-rw-r--r-- 1 mcc users 21K May 15 18:50 model.pnml
=====================================================================
Generated by BenchKit 2-3637
Executing tool lola
Input is GPPP-PT-C0100N0000010000, examination is CTLFireability
Time confinement is 3600 seconds
Memory confinement is 16384 MBytes
Number of cores is 4
Run identifier is r088-blw7-152649998400326
=====================================================================

--------------------
content from stdout:

=== Data for post analysis generated by BenchKit (invocation template)

The expected result is a vector of booleans
BOOL_VECTOR

here is the order used to build the result vector(from text file)
FORMULA_NAME GPPP-PT-C0100N0000010000-CTLFireability-00
FORMULA_NAME GPPP-PT-C0100N0000010000-CTLFireability-01
FORMULA_NAME GPPP-PT-C0100N0000010000-CTLFireability-02
FORMULA_NAME GPPP-PT-C0100N0000010000-CTLFireability-03
FORMULA_NAME GPPP-PT-C0100N0000010000-CTLFireability-04
FORMULA_NAME GPPP-PT-C0100N0000010000-CTLFireability-05
FORMULA_NAME GPPP-PT-C0100N0000010000-CTLFireability-06
FORMULA_NAME GPPP-PT-C0100N0000010000-CTLFireability-07
FORMULA_NAME GPPP-PT-C0100N0000010000-CTLFireability-08
FORMULA_NAME GPPP-PT-C0100N0000010000-CTLFireability-09
FORMULA_NAME GPPP-PT-C0100N0000010000-CTLFireability-10
FORMULA_NAME GPPP-PT-C0100N0000010000-CTLFireability-11
FORMULA_NAME GPPP-PT-C0100N0000010000-CTLFireability-12
FORMULA_NAME GPPP-PT-C0100N0000010000-CTLFireability-13
FORMULA_NAME GPPP-PT-C0100N0000010000-CTLFireability-14
FORMULA_NAME GPPP-PT-C0100N0000010000-CTLFireability-15

=== Now, execution of the tool begins

BK_START 1526739890486

info: Time: 3600 - MCC
===========================================================================================
prep: translating GPPP-PT-C0100N0000010000 Petri net model.pnml into LoLA format
===========================================================================================
prep: translating PT Petri net complete
prep: check for too many tokens
===========================================================================================
prep: translating GPPP-PT-C0100N0000010000 formula CTLFireability into LoLA format
===========================================================================================
prep: translating PT formula complete
vrfy: Checking CTLFireability @ GPPP-PT-C0100N0000010000 @ 3570 seconds
lola: LoLA will run for 3570 seconds at most (--timelimit)
lola: NET
lola: reading net from model.pnml.lola
lola: finished parsing
lola: closed net file model.pnml.lola
lola: 55/65536 symbol table entries, 0 collisions
lola: preprocessing...
lola: Size of bit vector: 1056
lola: finding significant places
lola: 33 places, 22 transitions, 21 significant places
lola: computing forward-conflicting sets
lola: computing back-conflicting sets
lola: 30 transition conflict sets
lola: TASK
lola: reading formula from GPPP-PT-C0100N0000010000-CTLFireability.task
lola: NOT((E (F ((FIREABLE(generate) AND FIREABLE(remove) AND FIREABLE(Phosphoglucose_isomerase) AND FIREABLE(Hexokinase)))) OR A (G (E (F (FIREABLE(Ru5P_epimerase))))))) : E (F (NOT(((NOT FIREABLE(Phosphoglucose_isomerase) OR NOT FIREABLE(TIM_backward)) AND E (F (FIREABLE(generate))))))) : E (F (A (G ((FIREABLE(Transketolase2) OR FIREABLE(Glutathione_oxidation)))))) : E (F (E (G (E (F (FIREABLE(Enolase))))))) : E (X (E (F (E (F (FIREABLE(remove))))))) : ((A (F (FIREABLE(G6P_dehydrogenase))) OR E (G (A (F (FIREABLE(TIM_forward)))))) OR A (X (FIREABLE(Aldolase)))) : (FIREABLE(Phosphoglycerate_mutase) OR NOT(E (F ((FIREABLE(Aldolase) AND FIREABLE(remove)))))) : NOT((A (G (E (X (FIREABLE(Hexokinase))))) AND (NOT FIREABLE(G6P_dehydrogenase) OR NOT FIREABLE(Glutathione_reductose)))) : NOT((E (F (E (G (FIREABLE(Phosphoglycerate_mutase))))) AND (NOT FIREABLE(Transketolase1) OR NOT FIREABLE(Transaldolase)))) : (NOT(A (F (FIREABLE(TIM_forward)))) OR ((A (X ((FIREABLE(TIM_forward)))) AND FIREABLE(Glutathione_reductose)) AND NOT FIREABLE(TIM_forward))) : NOT(NOT(A (G ((FIREABLE(Phosphoglycerate_kinase) OR FIREABLE(Phosphoglycerate_mutase) OR NOT FIREABLE(remove)))))) : (A (F ((FIREABLE(Lactate_dehydrogenase) AND FIREABLE(Transketolase2)))) OR NOT(NOT(E (F ((FIREABLE(Phosphoglucose_isomerase) AND FIREABLE(Aldolase))))))) : E (X (E (F (A (X (FIREABLE(remove))))))) : A (X (A (F ((FIREABLE(Aldolase) OR FIREABLE(Transaldolase) OR FIREABLE(Transketolase2) OR FIREABLE(GAP_dehydrogenase)))))) : E (F (NOT((E (X (FIREABLE(G6P_dehydrogenase))) OR NOT FIREABLE(Ru5P_isomerase))))) : NOT(A (X (NOT(E (F (FIREABLE(Pyruvate_kinase)))))))
lola: rewrite Frontend/Parser/formula_rewrite.k:318
lola: rewrite Frontend/Parser/formula_rewrite.k:326
lola: rewrite Frontend/Parser/formula_rewrite.k:332
lola: rewrite Frontend/Parser/formula_rewrite.k:297
lola: rewrite Frontend/Parser/formula_rewrite.k:323
lola: rewrite Frontend/Parser/formula_rewrite.k:329
lola: rewrite Frontend/Parser/formula_rewrite.k:326
lola: rewrite Frontend/Parser/formula_rewrite.k:332
lola: rewrite Frontend/Parser/formula_rewrite.k:297
lola: rewrite Frontend/Parser/formula_rewrite.k:315
lola: rewrite Frontend/Parser/formula_rewrite.k:297
lola: rewrite Frontend/Parser/formula_rewrite.k:326
lola: rewrite Frontend/Parser/formula_rewrite.k:332
lola: rewrite Frontend/Parser/formula_rewrite.k:297
lola: rewrite Frontend/Parser/formula_rewrite.k:548
lola: rewrite Frontend/Parser/formula_rewrite.k:401
lola: rewrite Frontend/Parser/formula_rewrite.k:254
lola: rewrite Frontend/Parser/formula_rewrite.k:326
lola: rewrite Frontend/Parser/formula_rewrite.k:332
lola: rewrite Frontend/Parser/formula_rewrite.k:297
lola: rewrite Frontend/Parser/formula_rewrite.k:315
lola: rewrite Frontend/Parser/formula_rewrite.k:323
lola: rewrite Frontend/Parser/formula_rewrite.k:329
lola: rewrite Frontend/Parser/formula_rewrite.k:326
lola: rewrite Frontend/Parser/formula_rewrite.k:335
lola: rewrite Frontend/Parser/formula_rewrite.k:297
lola: rewrite Frontend/Parser/formula_rewrite.k:297
lola: rewrite Frontend/Parser/formula_rewrite.k:315
lola: rewrite Frontend/Parser/formula_rewrite.k:326
lola: rewrite Frontend/Parser/formula_rewrite.k:332
lola: rewrite Frontend/Parser/formula_rewrite.k:326
lola: rewrite Frontend/Parser/formula_rewrite.k:329
lola: rewrite Frontend/Parser/formula_rewrite.k:297
lola: rewrite Frontend/Parser/formula_rewrite.k:297
lola: rewrite Frontend/Parser/formula_rewrite.k:323
lola: rewrite Frontend/Parser/formula_rewrite.k:332
lola: rewrite Frontend/Parser/formula_rewrite.k:297
lola: rewrite Frontend/Parser/formula_rewrite.k:251
lola: rewrite Frontend/Parser/formula_rewrite.k:323
lola: rewrite Frontend/Parser/formula_rewrite.k:329
lola: rewrite Frontend/Parser/formula_rewrite.k:297
lola: rewrite Frontend/Parser/formula_rewrite.k:326
lola: rewrite Frontend/Parser/formula_rewrite.k:332
lola: rewrite Frontend/Parser/formula_rewrite.k:300
lola: rewrite Frontend/Parser/formula_rewrite.k:326
lola: rewrite Frontend/Parser/formula_rewrite.k:332
lola: rewrite Frontend/Parser/formula_rewrite.k:297
lola: rewrite Frontend/Parser/formula_rewrite.k:323
lola: rewrite Frontend/Parser/formula_rewrite.k:329
lola: rewrite Frontend/Parser/formula_rewrite.k:300
lola: rewrite Frontend/Parser/formula_rewrite.k:318
lola: rewrite Frontend/Parser/formula_rewrite.k:326
lola: rewrite Frontend/Parser/formula_rewrite.k:335
lola: rewrite Frontend/Parser/formula_rewrite.k:297
lola: rewrite Frontend/Parser/formula_rewrite.k:297
lola: rewrite Frontend/Parser/formula_rewrite.k:326
lola: rewrite Frontend/Parser/formula_rewrite.k:332
lola: rewrite Frontend/Parser/formula_rewrite.k:297
lola: rewrite Frontend/Parser/formula_rewrite.k:323
lola: rewrite Frontend/Parser/formula_rewrite.k:335
lola: rewrite Frontend/Parser/formula_rewrite.k:323
lola: rewrite Frontend/Parser/formula_rewrite.k:329
lola: rewrite Frontend/Parser/formula_rewrite.k:300
lola: computing a collection of formulas
lola: RUNNING
lola: subprocess 0 will run for 223 seconds at most (--localtimelimit=0)
lola: ========================================
lola: ...considering subproblem: E (X (E (F (FIREABLE(remove)))))
lola: ========================================
lola: SUBTASK
lola: checking reachability from a successor
lola: rewrite Frontend/Parser/formula_rewrite.k:626
lola: processed formula: FIREABLE(remove)
lola: processed formula length: 16
lola: 64 rewrites
lola: closed formula file GPPP-PT-C0100N0000010000-CTLFireability.task
lola: STORE
lola: using a simple compression encoder (--encoder=simplecompressed)
lola: using a prefix tree store (--store=prefix)
lola: SEARCH (state space /EXEF)
lola: state space: using reachability graph (EXef version) (--search=depth)
lola: state space: using reachability preserving stubborn set method with insertion algorithm (--stubborn=tarjan)
lola: RUNNING
lola: 4593822 markings, 8296203 edges, 918764 markings/sec, 0 secs
lola: 8942800 markings, 16171709 edges, 869796 markings/sec, 5 secs
lola: 13263538 markings, 23996786 edges, 864148 markings/sec, 10 secs
lola: 17927784 markings, 31986306 edges, 932849 markings/sec, 15 secs
lola: 22092949 markings, 39077590 edges, 833033 markings/sec, 20 secs
lola: 26210530 markings, 46089871 edges, 823516 markings/sec, 25 secs
lola: 30887869 markings, 53764225 edges, 935468 markings/sec, 30 secs
lola: 34953478 markings, 61127896 edges, 813122 markings/sec, 35 secs
lola: 39077953 markings, 68598878 edges, 824895 markings/sec, 40 secs
lola: 43212477 markings, 76088478 edges, 826905 markings/sec, 45 secs
lola: 47351534 markings, 83587135 edges, 827811 markings/sec, 50 secs
lola: 51389292 markings, 90868135 edges, 807552 markings/sec, 55 secs
lola: 56245210 markings, 98357259 edges, 971184 markings/sec, 60 secs
lola: 60673489 markings, 105180897 edges, 885656 markings/sec, 65 secs
lola: 64970243 markings, 111804090 edges, 859351 markings/sec, 70 secs
lola: 69265993 markings, 118853271 edges, 859150 markings/sec, 75 secs
lola: 72783097 markings, 125830981 edges, 703421 markings/sec, 80 secs
lola: 76722697 markings, 132542218 edges, 787920 markings/sec, 85 secs
lola: 80699182 markings, 139318441 edges, 795297 markings/sec, 90 secs
lola: 84684201 markings, 146111144 edges, 797004 markings/sec, 95 secs
lola: 88629719 markings, 152838140 edges, 789104 markings/sec, 100 secs
lola: 92712824 markings, 159783908 edges, 816621 markings/sec, 105 secs
lola: 97267159 markings, 167090629 edges, 910867 markings/sec, 110 secs
lola: 101597314 markings, 174034069 edges, 866031 markings/sec, 115 secs
lola: 106551054 markings, 181460635 edges, 990748 markings/sec, 120 secs
lola: 111057431 markings, 188223296 edges, 901275 markings/sec, 125 secs
lola: 115427120 markings, 194780817 edges, 873938 markings/sec, 130 secs
lola: 119813377 markings, 201363227 edges, 877251 markings/sec, 135 secs
lola: 124020778 markings, 208078680 edges, 841480 markings/sec, 140 secs
lola: 127923653 markings, 214279361 edges, 780575 markings/sec, 145 secs
lola: 132070595 markings, 220675263 edges, 829388 markings/sec, 150 secs
lola: 136259605 markings, 227137824 edges, 837802 markings/sec, 155 secs
lola: 140485392 markings, 233659419 edges, 845157 markings/sec, 160 secs
lola: 144661358 markings, 240105721 edges, 835193 markings/sec, 165 secs
lola: 148831345 markings, 246544748 edges, 833997 markings/sec, 170 secs
lola: 153112364 markings, 253187031 edges, 856204 markings/sec, 175 secs
lola: 156653382 markings, 260281692 edges, 708204 markings/sec, 180 secs
lola: 159959444 markings, 266903794 edges, 661212 markings/sec, 185 secs
lola: 163189550 markings, 273373419 edges, 646021 markings/sec, 190 secs
lola: 167575956 markings, 280692253 edges, 877281 markings/sec, 195 secs
lola: 171887661 markings, 287606307 edges, 862341 markings/sec, 200 secs
lola: 176351107 markings, 295439242 edges, 892689 markings/sec, 205 secs
lola: 180440153 markings, 302824674 edges, 817809 markings/sec, 210 secs
lola: 184353273 markings, 309888174 edges, 782624 markings/sec, 215 secs
lola: local time limit reached - aborting
lola:
preliminary result: unknown unknown unknown unknown unknown unknown unknown unknown unknown unknown unknown unknown unknown unknown unknown unknown
lola: memory consumption: 7033660 KB
lola: time consumption: 223 seconds
lola: Child process aborted or communication problem between parent and child process
lola: subprocess 1 will run for 223 seconds at most (--localtimelimit=0)
lola: ========================================
lola: ...considering subproblem: (A (F (FIREABLE(G6P_dehydrogenase))) OR (E (G (A (F (FIREABLE(TIM_forward))))) OR A (X (FIREABLE(Aldolase)))))
lola: ========================================
lola: SUBTASK
lola: checking a Boolean combination of formulas
lola: RUNNING
lola: subprocess 1 will run for 223 seconds at most (--localtimelimit=0)
lola: ========================================
lola: ...considering subproblem: E (G (A (F (FIREABLE(TIM_forward)))))
lola: ========================================
lola: SUBTASK
lola: checking CTL
lola: rewrite Frontend/Parser/formula_rewrite.k:732
lola: rewrite Frontend/Parser/formula_rewrite.k:724
lola: processed formula: NOT(A(TRUE U NOT(A(TRUE U FIREABLE(TIM_forward)))))
lola: processed formula length: 51
lola: 65 rewrites
lola: closed formula file GPPP-PT-C0100N0000010000-CTLFireability.task
lola: STORE
lola: using a simple compression encoder (--encoder=simplecompressed)
lola: using a prefix tree store (--store=prefix)
lola: Using CTL preserving stubborn sets
lola: RUNNING
lola: CTL formula contains 2 significant temporal operators and needs 9 bytes of payload
lola: Ignoring fairness constraints (--fair).
lola: 2564483 markings, 6957573 edges, 512897 markings/sec, 0 secs
lola: 4734436 markings, 13285702 edges, 433991 markings/sec, 5 secs
lola: 6815688 markings, 19455798 edges, 416250 markings/sec, 10 secs
lola: 8772313 markings, 25327901 edges, 391325 markings/sec, 15 secs
lola: 10709451 markings, 31169338 edges, 387428 markings/sec, 20 secs
lola: 12510542 markings, 36801928 edges, 360218 markings/sec, 25 secs
lola: 14499028 markings, 42763041 edges, 397697 markings/sec, 30 secs
lola: 16249769 markings, 48193494 edges, 350148 markings/sec, 35 secs
lola: 18114187 markings, 53847746 edges, 372884 markings/sec, 40 secs
lola: 19777312 markings, 59036029 edges, 332625 markings/sec, 45 secs
lola: 21678775 markings, 64806244 edges, 380293 markings/sec, 50 secs
lola: 23283104 markings, 69928823 edges, 320866 markings/sec, 55 secs
lola: 25202458 markings, 75625282 edges, 383871 markings/sec, 60 secs
lola: 26844838 markings, 80853646 edges, 328476 markings/sec, 65 secs
lola: 28477203 markings, 85966717 edges, 326473 markings/sec, 70 secs
lola: 30366303 markings, 91676784 edges, 377820 markings/sec, 75 secs
lola: 31945670 markings, 96706511 edges, 315873 markings/sec, 80 secs
lola: 33528766 markings, 101737911 edges, 316619 markings/sec, 85 secs
lola: 35450409 markings, 107491232 edges, 384329 markings/sec, 90 secs
lola: 37186868 markings, 112992656 edges, 347292 markings/sec, 95 secs
lola: 38737715 markings, 118000365 edges, 310169 markings/sec, 100 secs
lola: 40752939 markings, 124024896 edges, 403045 markings/sec, 105 secs
lola: 42574318 markings, 129802517 edges, 364276 markings/sec, 110 secs
lola: 44267706 markings, 135244314 edges, 338678 markings/sec, 115 secs
lola: 46083890 markings, 140877113 edges, 363237 markings/sec, 120 secs
lola: 48167992 markings, 147232482 edges, 416820 markings/sec, 125 secs
lola: 49910788 markings, 152809941 edges, 348559 markings/sec, 130 secs
lola: 51604840 markings, 158257228 edges, 338810 markings/sec, 135 secs
lola: 53527357 markings, 164071396 edges, 384503 markings/sec, 140 secs
lola: 55464135 markings, 170159308 edges, 387356 markings/sec, 145 secs
lola: 57188946 markings, 175681977 edges, 344962 markings/sec, 150 secs
lola: 58866537 markings, 181076717 edges, 335518 markings/sec, 155 secs
lola: 60579111 markings, 186496948 edges, 342515 markings/sec, 160 secs
lola: 62714220 markings, 192884397 edges, 427022 markings/sec, 165 secs
lola: 64461700 markings, 198481515 edges, 349496 markings/sec, 170 secs
lola: 66135061 markings, 203892926 edges, 334672 markings/sec, 175 secs
lola: 67783675 markings, 209192504 edges, 329723 markings/sec, 180 secs
lola: 69648436 markings, 214845639 edges, 372952 markings/sec, 185 secs
lola: 71621207 markings, 220999834 edges, 394554 markings/sec, 190 secs
lola: 73351688 markings, 226539392 edges, 346096 markings/sec, 195 secs
lola: 75015356 markings, 231888125 edges, 332734 markings/sec, 200 secs
lola: 76659357 markings, 237199758 edges, 328800 markings/sec, 205 secs
lola: 78334789 markings, 242479759 edges, 335086 markings/sec, 210 secs
lola: 80460864 markings, 248857260 edges, 425215 markings/sec, 215 secs
lola: local time limit reached - aborting
lola:
preliminary result: unknown unknown unknown unknown unknown unknown unknown unknown unknown unknown unknown unknown unknown unknown unknown unknown
lola: caught signal User defined signal 1 - aborting LoLA
lola:
preliminary result: unknown unknown unknown unknown unknown unknown unknown unknown unknown unknown unknown unknown unknown unknown unknown unknown
lola: memory consumption: 6108008 KB
lola: time consumption: 447 seconds
lola: caught signal User defined signal 1 - aborting LoLA
lola:
preliminary result: unknown unknown unknown unknown unknown unknown unknown unknown unknown unknown unknown unknown unknown unknown unknown unknown
lola: memory consumption: 6108008 KB
lola: time consumption: 447 seconds
lola: Child process aborted or communication problem between parent and child process
lola: subprocess 2 will run for 223 seconds at most (--localtimelimit=0)
lola: ========================================
lola: ...considering subproblem: (E (F (A (X (NOT FIREABLE(Hexokinase))))) OR (FIREABLE(G6P_dehydrogenase) AND FIREABLE(Glutathione_reductose)))
lola: ========================================
lola: SUBTASK
lola: checking a Boolean combination of formulas
lola: RUNNING
lola: subprocess 2 will run for 223 seconds at most (--localtimelimit=0)
lola: ========================================
lola: ...considering subproblem: (FIREABLE(G6P_dehydrogenase) AND FIREABLE(Glutathione_reductose))
lola: ========================================
lola: SUBTASK
lola: checking initial satisfaction
lola: processed formula: (FIREABLE(G6P_dehydrogenase) AND FIREABLE(Glutathione_reductose))
lola: processed formula length: 65
lola: 63 rewrites
lola: closed formula file GPPP-PT-C0100N0000010000-CTLFireability.task
lola: processed formula with 0 atomic propositions
lola: RUNNING
lola: SUBRESULT
lola: result: no
lola: produced by: preprocessing
lola: The net violates the given property already in its initial state.
lola: 0 markings, 0 edges
lola: ========================================
lola: subprocess 3 will run for 240 seconds at most (--localtimelimit=0)
lola: ========================================
lola: ...considering subproblem: E (F (A (X (NOT FIREABLE(Hexokinase)))))
lola: ========================================
lola: SUBTASK
lola: checking CTL
lola: rewrite Frontend/Parser/formula_rewrite.k:734
lola: rewrite Frontend/Parser/formula_rewrite.k:719
lola: processed formula: E(TRUE U AX(NOT FIREABLE(Hexokinase)))
lola: processed formula length: 38
lola: 65 rewrites
lola: closed formula file GPPP-PT-C0100N0000010000-CTLFireability.task
lola: STORE
lola: using a simple compression encoder (--encoder=simplecompressed)
lola: using a prefix tree store (--store=prefix)
lola: Using CTL preserving stubborn sets
lola: RUNNING
lola: CTL formula contains 1 significant temporal operators and needs 5 bytes of payload
lola: Ignoring fairness constraints (--fair).
lola: SUBRESULT
lola: result: yes
lola: produced by: CTL model checker
lola: The net satisfies the given formula.
lola: 405 markings, 404 edges
lola: lola: SUBRESULT
========================================
lola: result: yes
lola: The Boolean predicate is true.
lola: ========================================

FORMULA GPPP-PT-C0100N0000010000-CTLFireability-7 TRUE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT TOPOLOGICAL STATE_COMPRESSION STUBBORN_SETS USE_NUPN UNFOLDING_TO_PT
lola: subprocess 3 will run for 240 seconds at most (--localtimelimit=0)
lola: ========================================
lola: ...considering subproblem: (E (G (NOT FIREABLE(TIM_forward))) OR (A (X ((FIREABLE(TIM_forward)))) AND (FIREABLE(Glutathione_reductose) AND NOT FIREABLE(TIM_forward))))
lola: ========================================
lola: SUBTASK
lola: checking a Boolean combination of formulas
lola: RUNNING
lola: subprocess 3 will run for 240 seconds at most (--localtimelimit=0)
lola: ========================================
lola: ...considering subproblem: (FIREABLE(Glutathione_reductose) AND NOT FIREABLE(TIM_forward))
lola: ========================================
lola: SUBTASK
lola: checking initial satisfaction
lola: rewrite Frontend/Parser/formula_rewrite.k:700
lola: processed formula: (FIREABLE(Glutathione_reductose) AND NOT FIREABLE(TIM_forward))
lola: processed formula length: 63
lola: 64 rewrites
lola: closed formula file GPPP-PT-C0100N0000010000-CTLFireability.task
lola: processed formula with 0 atomic propositions
lola: RUNNING
lola: SUBRESULT
lola: result: no
lola: produced by: preprocessing
lola: The net violates the given property already in its initial state.
lola: 0 markings, 0 edges
lola: ========================================
lola: subprocess 4 will run for 260 seconds at most (--localtimelimit=0)
lola: ========================================
lola: ...considering subproblem: E (G (NOT FIREABLE(TIM_forward)))
lola: ========================================
lola: SUBTASK
lola: checking possible preservation
lola: processed formula: E (G (NOT FIREABLE(TIM_forward)))
lola: processed formula length: 33
lola: 63 rewrites
lola: closed formula file GPPP-PT-C0100N0000010000-CTLFireability.task
lola: STORE
lola: using a simple compression encoder (--encoder=simplecompressed)
lola: using a prefix tree store (--store=prefix)
lola: SEARCH (state space / EG)
lola: state space: using search routine for EG formula (--search=depth)
lola: state space: using EG preserving stubborn set method (--stubborn=tarjan)
lola: RUNNING
lola: SUBRESULT
lola: result: no
lola: produced by: state space / EG
lola: The predicate is not possibly preserved.
lola: 332105 markings, 363360 edges
lola: ========================================
lola: SUBRESULT
lola: result: no
lola: The Boolean predicate is false.
lola: ========================================

FORMULA GPPP-PT-C0100N0000010000-CTLFireability-9 FALSE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT TOPOLOGICAL STATE_COMPRESSION STUBBORN_SETS USE_NUPN UNFOLDING_TO_PT
lola: subprocess 4 will run for 260 seconds at most (--localtimelimit=0)
lola: ========================================
lola: ...considering subproblem: E (X (E (F (A (X (FIREABLE(remove)))))))
lola: ========================================
lola: SUBTASK
lola: checking CTL
lola: rewrite Frontend/Parser/formula_rewrite.k:734
lola: rewrite Frontend/Parser/formula_rewrite.k:719
lola: rewrite Frontend/Parser/formula_rewrite.k:721
lola: processed formula: EX(E(TRUE U AX(FIREABLE(remove))))
lola: processed formula length: 34
lola: 66 rewrites
lola: closed formula file GPPP-PT-C0100N0000010000-CTLFireability.task
lola: STORE
lola: using a simple compression encoder (--encoder=simplecompressed)
lola: using a prefix tree store (--store=prefix)
lola: Using CTL preserving stubborn sets
lola: RUNNING
lola: CTL formula contains 1 significant temporal operators and needs 5 bytes of payload
lola: Ignoring fairness constraints (--fair).
lola: SUBRESULT
lola: result: yes
lola: produced by: CTL model checker
lola: The net satisfies the given formula.
lola: 4943 markings, 5991 edges
lola: ========================================

FORMULA GPPP-PT-C0100N0000010000-CTLFireability-12 TRUE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT TOPOLOGICAL STATE_COMPRESSION STUBBORN_SETS USE_NUPN UNFOLDING_TO_PT
lola: subprocess 5 will run for 283 seconds at most (--localtimelimit=0)
lola: ========================================
lola: ...considering subproblem: A (X (A (F ((FIREABLE(Aldolase) OR FIREABLE(Transaldolase) OR FIREABLE(Transketolase2) OR FIREABLE(GAP_dehydrogenase))))))
lola: ========================================
lola: SUBTASK
lola: checking eventual occurrence from all successors
lola: rewrite Frontend/Parser/formula_rewrite.k:664
lola: rewrite Frontend/Parser/formula_rewrite.k:694
lola: processed formula: (NOT FIREABLE(Aldolase) AND NOT FIREABLE(Transaldolase) AND NOT FIREABLE(Transketolase2) AND NOT FIREABLE(GAP_dehydrogenase))
lola: processed formula length: 125
lola: 65 rewrites
lola: closed formula file GPPP-PT-C0100N0000010000-CTLFireability.task
lola: STORE
lola: using a simple compression encoder (--encoder=simplecompressed)
lola: using a prefix tree store (--store=prefix)
lola: SEARCH (state space /EXEG)
lola: state space: using reachability graph (EXEG version) (--search=depth)
lola: state space: using invisibility based stubborn set method (--stubborn=tarjan)
lola: RUNNING
lola: SUBRESULT
lola: result: yes
lola: produced by: state space /EXEG
lola: The predicate eventually occurs from all successors.
lola: 474044 markings, 552751 edges
lola: ========================================

FORMULA GPPP-PT-C0100N0000010000-CTLFireability-13 TRUE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT TOPOLOGICAL STATE_COMPRESSION STUBBORN_SETS USE_NUPN UNFOLDING_TO_PT
lola: subprocess 6 will run for 312 seconds at most (--localtimelimit=0)
lola: ========================================
lola: ...considering subproblem: E (F ((A (X (NOT FIREABLE(G6P_dehydrogenase))) AND FIREABLE(Ru5P_isomerase))))
lola: ========================================
lola: SUBTASK
lola: checking CTL
lola: rewrite Frontend/Parser/formula_rewrite.k:734
lola: rewrite Frontend/Parser/formula_rewrite.k:719
lola: processed formula: E(TRUE U (AX(NOT FIREABLE(G6P_dehydrogenase)) AND FIREABLE(Ru5P_isomerase)))
lola: processed formula length: 76
lola: 65 rewrites
lola: closed formula file GPPP-PT-C0100N0000010000-CTLFireability.task
lola: STORE
lola: using a simple compression encoder (--encoder=simplecompressed)
lola: using a prefix tree store (--store=prefix)
lola: Using CTL preserving stubborn sets
lola: RUNNING
lola: CTL formula contains 1 significant temporal operators and needs 5 bytes of payload
lola: Ignoring fairness constraints (--fair).
lola: SUBRESULT
lola: result: yes
lola: produced by: CTL model checker
lola: The net satisfies the given formula.
lola: 4372 markings, 5362 edges
lola:
FORMULA GPPP-PT-C0100N0000010000-CTLFireability-14 TRUE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT TOPOLOGICAL STATE_COMPRESSION STUBBORN_SETS USE_NUPN UNFOLDING_TO_PT
========================================
lola: subprocess 7 will run for 346 seconds at most (--localtimelimit=0)
lola: ========================================
lola: ...considering subproblem: E (X (E (F (FIREABLE(Pyruvate_kinase)))))
lola: ========================================
lola: SUBTASK
lola: checking reachability from a successor
lola: rewrite Frontend/Parser/formula_rewrite.k:626
lola: processed formula: FIREABLE(Pyruvate_kinase)
lola: processed formula length: 25
lola: 64 rewrites
lola: closed formula file GPPP-PT-C0100N0000010000-CTLFireability.task
lola: STORE
lola: using a simple compression encoder (--encoder=simplecompressed)
lola: using a prefix tree store (--store=prefix)
lola: SEARCH (state space /EXEF)
lola: state space: using reachability graph (EXef version) (--search=depth)
lola: state space: using reachability preserving stubborn set method with insertion algorithm (--stubborn=tarjan)
lola: RUNNING
lola: SUBRESULT
lola: result: yes
lola: produced by: state space /EXEF
lola: The predicate is reachable from some successor.
lola: 17 markings, 16 edges
lola:
FORMULA GPPP-PT-C0100N0000010000-CTLFireability-15 TRUE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT TOPOLOGICAL STATE_COMPRESSION STUBBORN_SETS USE_NUPN UNFOLDING_TO_PT
========================================
lola: subprocess 8 will run for 390 seconds at most (--localtimelimit=0)
lola: ========================================
lola: ...considering subproblem: A (G ((FIREABLE(Phosphoglycerate_kinase) OR FIREABLE(Phosphoglycerate_mutase) OR NOT FIREABLE(remove))))
lola: ========================================
lola: SUBTASK
lola: checking invariance
lola: Planning: workflow for reachability check: stateequation||search (--findpath=off)
lola: rewrite Frontend/Parser/formula_rewrite.k:631
lola: rewrite Frontend/Parser/formula_rewrite.k:694
lola: processed formula: A (G ((FIREABLE(Phosphoglycerate_kinase) OR FIREABLE(Phosphoglycerate_mutase) OR NOT FIREABLE(remove))))
lola: processed formula length: 106
lola: 65 rewrites
lola: closed formula file GPPP-PT-C0100N0000010000-CTLFireability.task
lola: STORE
lola: using a simple compression encoder (--encoder=simplecompressed)
lola: using a prefix tree store (--store=prefix)
lola: SEARCH (state space)
lola: state space: using reachability graph (--search=depth)
lola: state space: using reachability preserving stubborn set method with insertion algorithm (--stubborn=tarjan)
lola: RUNNING
lola: rewrite Frontend/Parser/formula_rewrite.k:631
lola: rewrite Frontend/Parser/formula_rewrite.k:694
lola: formula 0: (NOT FIREABLE(Phosphoglycerate_kinase) AND NOT FIREABLE(Phosphoglycerate_mutase) AND FIREABLE(remove))
lola: state equation: Generated DNF with 8 literals and 2 conjunctive subformulas
lola: state equation: write sara problem file to GPPP-PT-C0100N0000010000-CTLFireability-8-0.sara
lola: state equation: calling and running sara
sara: try reading problem file GPPP-PT-C0100N0000010000-CTLFireability-8-0.sara.
sara: place or transition ordering is non-deterministic
lola: sara is running 0 secs || 4886368 markings, 8482987 edges, 977274 markings/sec, 0 secs
lola: sara is running 5 secs || 9435747 markings, 16401370 edges, 909876 markings/sec, 5 secs
lola: sara is running 10 secs || 14077046 markings, 24480517 edges, 928260 markings/sec, 10 secs
lola: sara is running 15 secs || 18921840 markings, 32420786 edges, 968959 markings/sec, 15 secs
lola: sara is running 20 secs || 23433920 markings, 39734129 edges, 902416 markings/sec, 20 secs
lola: sara is running 25 secs || 27794586 markings, 46789025 edges, 872133 markings/sec, 25 secs
lola: sara is running 30 secs || 32291407 markings, 54060174 edges, 899364 markings/sec, 30 secs
lola: sara is running 35 secs || 36995998 markings, 61802109 edges, 940918 markings/sec, 35 secs

lola: state equation: solution impossible
lola: SUBRESULT
lola: result: yes
lola: produced by: state equation
lola: The predicate is invariant.
lola: ========================================

FORMULA GPPP-PT-C0100N0000010000-CTLFireability-10 TRUE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT TOPOLOGICAL STATE_COMPRESSION STUBBORN_SETS USE_NUPN UNFOLDING_TO_PT
lola: subprocess 9 will run for 440 seconds at most (--localtimelimit=0)
lola: ========================================
lola: ...considering subproblem: E (F (A (G ((FIREABLE(Transketolase2) OR FIREABLE(Glutathione_oxidation))))))
lola: ========================================
lola: SUBTASK
lola: checking possible invariance
lola: AGEF init
lola: rewrite Frontend/Parser/formula_rewrite.k:636
lola: rewrite Frontend/Parser/formula_rewrite.k:694
lola: processed formula: (NOT FIREABLE(Transketolase2) AND NOT FIREABLE(Glutathione_oxidation))
lola: processed formula length: 70
lola: 65 rewrites
lola: closed formula file GPPP-PT-C0100N0000010000-CTLFireability.task
lola: STORE
lola: using a simple compression encoder (--encoder=simplecompressed)
lola: using a prefix tree store (--store=prefix)
lola: SEARCH
lola: using tscc preserving stubborn set method (--stubborn)
lola: RUNNING
lola: 1782509 markings, 10129805 edges, 356502 markings/sec, 0 secs
lola: 3544013 markings, 20182653 edges, 352301 markings/sec, 5 secs
lola: 5180618 markings, 30583794 edges, 327321 markings/sec, 10 secs
lola: 6805077 markings, 40418866 edges, 324892 markings/sec, 15 secs
lola: 8550351 markings, 50152994 edges, 349055 markings/sec, 20 secs
lola: 10050825 markings, 59863524 edges, 300095 markings/sec, 25 secs
lola: 11574761 markings, 69410687 edges, 304787 markings/sec, 30 secs
lola: 13002798 markings, 78833766 edges, 285607 markings/sec, 35 secs
lola: 14869096 markings, 87200800 edges, 373260 markings/sec, 40 secs
lola: 16370959 markings, 95975043 edges, 300373 markings/sec, 45 secs
lola: 19018051 markings, 105936432 edges, 529418 markings/sec, 50 secs
lola: 21463122 markings, 115360377 edges, 489014 markings/sec, 55 secs
lola: 23855302 markings, 124576459 edges, 478436 markings/sec, 60 secs
lola: 26178204 markings, 134307611 edges, 464580 markings/sec, 65 secs
lola: 28323141 markings, 143427383 edges, 428987 markings/sec, 70 secs
lola: 30714313 markings, 152571006 edges, 478234 markings/sec, 75 secs
lola: 33089382 markings, 161479866 edges, 475014 markings/sec, 80 secs
lola: 35253694 markings, 170358510 edges, 432862 markings/sec, 85 secs
lola: 37146353 markings, 178670643 edges, 378532 markings/sec, 90 secs
lola: 39240709 markings, 187139330 edges, 418871 markings/sec, 95 secs
lola: 41291742 markings, 195709959 edges, 410207 markings/sec, 100 secs
lola: 43237418 markings, 204039329 edges, 389135 markings/sec, 105 secs
lola: 45394211 markings, 211243778 edges, 431359 markings/sec, 110 secs
lola: 47254267 markings, 218798693 edges, 372011 markings/sec, 115 secs
lola: 49587080 markings, 227544167 edges, 466563 markings/sec, 120 secs
lola: 52050878 markings, 237039714 edges, 492760 markings/sec, 125 secs
lola: 54266813 markings, 245579003 edges, 443187 markings/sec, 130 secs
lola: 56606316 markings, 254708640 edges, 467901 markings/sec, 135 secs
lola: 58796869 markings, 264019926 edges, 438111 markings/sec, 140 secs
lola: 60898052 markings, 272891853 edges, 420237 markings/sec, 145 secs
lola: 63289786 markings, 281863022 edges, 478347 markings/sec, 150 secs
lola: 65604997 markings, 290634252 edges, 463042 markings/sec, 155 secs
lola: 67640548 markings, 299051185 edges, 407110 markings/sec, 160 secs
lola: 69509547 markings, 307230006 edges, 373800 markings/sec, 165 secs
lola: 71573904 markings, 315609791 edges, 412871 markings/sec, 170 secs
lola: 73542487 markings, 323894903 edges, 393717 markings/sec, 175 secs
lola: 75436658 markings, 331942734 edges, 378834 markings/sec, 180 secs
lola: 77533915 markings, 338912289 edges, 419451 markings/sec, 185 secs
lola: 79319581 markings, 346171854 edges, 357133 markings/sec, 190 secs
lola: 81250044 markings, 354842399 edges, 386093 markings/sec, 195 secs
lola: 82726870 markings, 364747811 edges, 295365 markings/sec, 200 secs
lola: 84142283 markings, 374239859 edges, 283083 markings/sec, 205 secs
lola: 85505902 markings, 384140144 edges, 272724 markings/sec, 210 secs
lola: 86755643 markings, 393517077 edges, 249948 markings/sec, 215 secs
lola: 88187302 markings, 402844237 edges, 286332 markings/sec, 220 secs
lola: 89541355 markings, 412006183 edges, 270811 markings/sec, 225 secs
lola: 90704499 markings, 420738484 edges, 232629 markings/sec, 230 secs
lola: 91885684 markings, 429343327 edges, 236237 markings/sec, 235 secs
lola: 93086611 markings, 438177237 edges, 240185 markings/sec, 240 secs
lola: 94225903 markings, 446676288 edges, 227858 markings/sec, 245 secs
lola: 95777796 markings, 454082687 edges, 310379 markings/sec, 250 secs
lola: 96953826 markings, 461958108 edges, 235206 markings/sec, 255 secs
lola: 99377124 markings, 471289290 edges, 484660 markings/sec, 260 secs
lola: 101711924 markings, 480286589 edges, 466960 markings/sec, 265 secs
lola: 103991104 markings, 489073404 edges, 455836 markings/sec, 270 secs
lola: 106218299 markings, 498186091 edges, 445439 markings/sec, 275 secs
lola: 108265637 markings, 506887525 edges, 409468 markings/sec, 280 secs
lola: 110424711 markings, 515525010 edges, 431815 markings/sec, 285 secs
lola: 112741846 markings, 524215973 edges, 463427 markings/sec, 290 secs
lola: 114908230 markings, 532713809 edges, 433277 markings/sec, 295 secs
lola: 116821399 markings, 540756582 edges, 382634 markings/sec, 300 secs
lola: 118640742 markings, 548522354 edges, 363869 markings/sec, 305 secs
lola: 120629990 markings, 556667864 edges, 397850 markings/sec, 310 secs
lola: 122478061 markings, 564590103 edges, 369614 markings/sec, 315 secs
lola: 124325738 markings, 572266641 edges, 369535 markings/sec, 320 secs
lola: 126335001 markings, 578805073 edges, 401853 markings/sec, 325 secs
lola: 128063736 markings, 585887939 edges, 345747 markings/sec, 330 secs
lola: 130161548 markings, 594158783 edges, 419562 markings/sec, 335 secs
lola: 132286330 markings, 603412941 edges, 424956 markings/sec, 340 secs
lola: 134321904 markings, 612271503 edges, 407115 markings/sec, 345 secs
lola: 136325251 markings, 620996562 edges, 400669 markings/sec, 350 secs
lola: 138305596 markings, 630158008 edges, 396069 markings/sec, 355 secs
lola: 140148180 markings, 638910395 edges, 368517 markings/sec, 360 secs
lola: 142023129 markings, 647500390 edges, 374990 markings/sec, 365 secs
lola: 144038589 markings, 656065050 edges, 403092 markings/sec, 370 secs
lola: 145501184 markings, 662282259 edges, 292519 markings/sec, 375 secs
lola: 147310236 markings, 670483000 edges, 361810 markings/sec, 380 secs
lola: 148950646 markings, 678256611 edges, 328082 markings/sec, 385 secs
lola: 150532274 markings, 685807792 edges, 316326 markings/sec, 390 secs
lola: 152268915 markings, 693760288 edges, 347328 markings/sec, 395 secs
lola: 153951276 markings, 701641729 edges, 336472 markings/sec, 400 secs
lola: 155545942 markings, 709368318 edges, 318933 markings/sec, 405 secs
lola: 157447665 markings, 716171286 edges, 380345 markings/sec, 410 secs
lola: 158968841 markings, 723104645 edges, 304235 markings/sec, 415 secs
lola: 160564746 markings, 730160769 edges, 319181 markings/sec, 420 secs
lola: 162793335 markings, 738782821 edges, 445718 markings/sec, 425 secs
lola: 165124570 markings, 747766550 edges, 466247 markings/sec, 430 secs
lola: local time limit reached - aborting
lola:
preliminary result: unknown unknown unknown unknown unknown unknown unknown yes unknown no yes unknown yes yes yes yes
lola: caught signal User defined signal 2 - aborting LoLA
lola:
preliminary result: unknown unknown unknown unknown unknown unknown unknown yes unknown no yes unknown yes yes yes yes
lola: memory consumption: 6560352 KB
lola: time consumption: 928 seconds
lola: Child process aborted or communication problem between parent and child process
lola: subprocess 10 will run for 440 seconds at most (--localtimelimit=0)
lola: ========================================
lola: ...considering subproblem: E (F (E (G (E (F (FIREABLE(Enolase)))))))
lola: ========================================
lola: SUBTASK
lola: checking CTL
lola: rewrite Frontend/Parser/formula_rewrite.k:719
lola: rewrite Frontend/Parser/formula_rewrite.k:724
lola: rewrite Frontend/Parser/formula_rewrite.k:719
lola: processed formula: E(TRUE U NOT(A(TRUE U NOT(E(TRUE U FIREABLE(Enolase))))))
lola: processed formula length: 57
lola: 66 rewrites
lola: closed formula file GPPP-PT-C0100N0000010000-CTLFireability.task
lola: STORE
lola: using a simple compression encoder (--encoder=simplecompressed)
lola: using a prefix tree store (--store=prefix)
lola: Using CTL preserving stubborn sets
lola: RUNNING
lola: CTL formula contains 3 significant temporal operators and needs 13 bytes of payload
lola: Ignoring fairness constraints (--fair).
lola: SUBRESULT
lola: result: yes
lola: produced by: CTL model checker
lola: The net satisfies the given formula.
lola: 4840 markings, 6673 edges
lola:
FORMULA GPPP-PT-C0100N0000010000-CTLFireability-3 TRUE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT TOPOLOGICAL STATE_COMPRESSION STUBBORN_SETS USE_NUPN UNFOLDING_TO_PT
========================================
lola: subprocess 11 will run for 528 seconds at most (--localtimelimit=0)
lola: ========================================
lola: ...considering subproblem: (FIREABLE(Phosphoglycerate_mutase) OR A (G ((NOT FIREABLE(Aldolase) OR NOT FIREABLE(remove)))))
lola: ========================================
lola: SUBTASK
lola: checking a Boolean combination of formulas
lola: RUNNING
lola: subprocess 11 will run for 528 seconds at most (--localtimelimit=0)
lola: ========================================
lola: ...considering subproblem: FIREABLE(Phosphoglycerate_mutase)
lola: ========================================
lola: SUBTASK
lola: checking initial satisfaction
lola: processed formula: FIREABLE(Phosphoglycerate_mutase)
lola: processed formula length: 33
lola: 63 rewrites
lola: closed formula file GPPP-PT-C0100N0000010000-CTLFireability.task
lola: processed formula with 0 atomic propositions
lola: RUNNING
lola: SUBRESULT
lola: result: no
lola: produced by: preprocessing
lola: The net violates the given property already in its initial state.
lola: 0 markings, 0 edges
lola: lola: subprocess 12 will run for 660 seconds at most (--localtimelimit=0)
lola: ========================================
lola: ...considering subproblem: A (G ((NOT FIREABLE(Aldolase) OR NOT FIREABLE(remove))))
lola: ========================================
lola: SUBTASK
lola: checking invariance
lola: Planning: workflow for reachability check: stateequation||search (--findpath=off)
lola: rewrite Frontend/Parser/formula_rewrite.k:631
lola: rewrite Frontend/Parser/formula_rewrite.k:695
lola: processed formula: A (G ((NOT FIREABLE(Aldolase) OR NOT FIREABLE(remove))))
lola: processed formula length: 57
lola: 65 rewrites
lola: closed formula file GPPP-PT-C0100N0000010000-CTLFireability.task
lola: STORE
lola: using a simple compression encoder (--encoder=simplecompressed)
lola: using a prefix tree store (--store=prefix)
lola: SEARCH (state space)
lola: state space: using reachability graph (--search=depth)
lola: state space: using reachability preserving stubborn set method with insertion algorithm (--stubborn=tarjan)
lola: RUNNING
lola: rewrite Frontend/Parser/formula_rewrite.k:631
lola: rewrite Frontend/Parser/formula_rewrite.k:695
lola: formula 0: (FIREABLE(Aldolase) AND FIREABLE(remove))
lola: state equation: Generated DNF with 3 literals and 1 conjunctive subformulas
lola: state equation: write sara problem file to GPPP-PT-C0100N0000010000-CTLFireability-12-0.sara
========================================
lola: state equation: calling and running sara
sara: try reading problem file GPPP-PT-C0100N0000010000-CTLFireability-12-0.sara.
sara: place or transition ordering is non-deterministic

lola: state equation: solution impossible
lola: SUBRESULT
lola: result: yes
lola: produced by: state equation
lola: The predicate is invariant.
lola: ========================================
lola: SUBRESULT
lola: result: yes
lola: The Boolean predicate is true.
lola: ========================================

FORMULA GPPP-PT-C0100N0000010000-CTLFireability-6 TRUE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT TOPOLOGICAL STATE_COMPRESSION STUBBORN_SETS USE_NUPN UNFOLDING_TO_PT
lola: subprocess 12 will run for 660 seconds at most (--localtimelimit=0)
lola: ========================================
lola: ...considering subproblem: (A (G (A (F (NOT FIREABLE(Phosphoglycerate_mutase))))) OR (FIREABLE(Transketolase1) AND FIREABLE(Transaldolase)))
lola: ========================================
lola: SUBTASK
lola: checking a Boolean combination of formulas
lola: RUNNING
lola: subprocess 12 will run for 660 seconds at most (--localtimelimit=0)
lola: ========================================
lola: ...considering subproblem: (FIREABLE(Transketolase1) AND FIREABLE(Transaldolase))
lola: ========================================
lola: SUBTASK
lola: checking initial satisfaction
lola: processed formula: (FIREABLE(Transketolase1) AND FIREABLE(Transaldolase))
lola: processed formula length: 54
lola: 63 rewrites
lola: closed formula file GPPP-PT-C0100N0000010000-CTLFireability.task
lola: processed formula with 0 atomic propositions
lola: RUNNING
lola: SUBRESULT
lola: result: no
lola: produced by: preprocessing
lola: The net violates the given property already in its initial state.
lola: 0 markings, 0 edges
lola: ========================================
lola: subprocess 13 will run for 880 seconds at most (--localtimelimit=0)
lola: ========================================
lola: ...considering subproblem: A (G (A (F (NOT FIREABLE(Phosphoglycerate_mutase)))))
lola: ========================================
lola: SUBTASK
lola: checking eventual occurrence in all states
lola: rewrite Frontend/Parser/formula_rewrite.k:644
lola: rewrite Frontend/Parser/formula_rewrite.k:695
lola: processed formula: FIREABLE(Phosphoglycerate_mutase)
lola: processed formula length: 33
lola: 65 rewrites
lola: closed formula file GPPP-PT-C0100N0000010000-CTLFireability.task
lola: STORE
lola: using a simple compression encoder (--encoder=simplecompressed)
lola: using a prefix tree store (--store=prefix)
lola: SEARCH (state space /EFEG)
lola: state space: using reachability graph (EFEG version) (--search=depth)
lola: state space: using reachability preserving stubborn set method with insertion algorithm (--stubborn=tarjan)
lola: RUNNING
lola: SUBRESULT
lola: result: no
lola: produced by: state space /EFEG
lola: The predicate does not eventually occur from all states.
lola: 26 markings, 26 edges
lola: ========================================
lola: SUBRESULT
lola: result: no
lola: The Boolean predicate is false.
lola: ========================================

FORMULA GPPP-PT-C0100N0000010000-CTLFireability-8 FALSE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT TOPOLOGICAL STATE_COMPRESSION STUBBORN_SETS USE_NUPN UNFOLDING_TO_PT
lola: subprocess 13 will run for 880 seconds at most (--localtimelimit=0)
lola: ========================================
lola: ...considering subproblem: (A (F ((FIREABLE(Lactate_dehydrogenase) AND FIREABLE(Transketolase2)))) OR E (F ((FIREABLE(Phosphoglucose_isomerase) AND FIREABLE(Aldolase)))))
lola: ========================================
lola: SUBTASK
lola: checking a Boolean combination of formulas
lola: RUNNING
lola: subprocess 13 will run for 880 seconds at most (--localtimelimit=0)
lola: ========================================
lola: ...considering subproblem: E (F ((FIREABLE(Phosphoglucose_isomerase) AND FIREABLE(Aldolase))))
lola: ========================================
lola: SUBTASK
lola: checking reachability
lola: Planning: workflow for reachability check: stateequation||search (--findpath=off)
lola: rewrite Frontend/Parser/formula_rewrite.k:625
lola: processed formula: E (F ((FIREABLE(Phosphoglucose_isomerase) AND FIREABLE(Aldolase))))
lola: processed formula length: 67
lola: 64 rewrites
lola: closed formula file GPPP-PT-C0100N0000010000-CTLFireability.task
lola: STORE
lola: using a simple compression encoder (--encoder=simplecompressed)
lola: using a prefix tree store (--store=prefix)
lola: SEARCH (state space)
lola: state space: using reachability graph (--search=depth)
lola: state space: using reachability preserving stubborn set method with insertion algorithm (--stubborn=tarjan)
lola: RUNNING
lola: rewrite Frontend/Parser/formula_rewrite.k:625
lola: formula 0: (FIREABLE(Phosphoglucose_isomerase) AND FIREABLE(Aldolase))
lola: state equation: Generated DNF with 3 literals and 1 conjunctive subformulas
lola: state equation: write sara problem file to GPPP-PT-C0100N0000010000-CTLFireability-13-0.sara
lola: state equation: calling and running sara
lola: SUBRESULT
lola: result: yes
lola: produced by: state space
lola: The predicate is reachable.
lola: 606 markings, 605 edges
lola: ========================================
lola: SUBRESULT
lola: result: yes
lola: The Boolean predicate is true.
lola: ========================================

FORMULA GPPP-PT-C0100N0000010000-CTLFireability-11 TRUE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT TOPOLOGICAL STATE_COMPRESSION STUBBORN_SETS USE_NUPN UNFOLDING_TO_PT
lola: subprocess 14 will run for 1320 seconds at most (--localtimelimit=0)
lola: ========================================
lola: ...considering subproblem: (E (F ((FIREABLE(Phosphoglucose_isomerase) AND FIREABLE(TIM_backward)))) OR E (F (A (G (NOT FIREABLE(generate))))))
lola: ========================================
lola: SUBTASK
lola: checking a Boolean combination of formulas
lola: RUNNING
lola: subprocess 14 will run for 1320 seconds at most (--localtimelimit=0)
lola: ========================================
lola: ...considering subproblem: E (F ((FIREABLE(Phosphoglucose_isomerase) AND FIREABLE(TIM_backward))))
lola: ========================================
lola: SUBTASK
lola: checking reachability
lola: Planning: workflow for reachability check: stateequation||search (--findpath=off)
lola: rewrite Frontend/Parser/formula_rewrite.k:625
lola: processed formula: E (F ((FIREABLE(Phosphoglucose_isomerase) AND FIREABLE(TIM_backward))))
lola: processed formula length: 71
lola: 64 rewrites
lola: closed formula file GPPP-PT-C0100N0000010000-CTLFireability.task
lola: STORE
lola: using a simple compression encoder (--encoder=simplecompressed)
lola: using a prefix tree store (--store=prefix)
lola: SEARCH (state space)
lola: state space: using reachability graph (--search=depth)
lola: state space: using reachability preserving stubborn set method with insertion algorithm (--stubborn=tarjan)
lola: RUNNING
lola: rewrite Frontend/Parser/formula_rewrite.k:625
lola: formula 0: (FIREABLE(Phosphoglucose_isomerase) AND FIREABLE(TIM_backward))
lola: state equation: Generated DNF with 3 literals and 1 conjunctive subformulas
lola: state equation: write sara problem file to GPPP-PT-C0100N0000010000-CTLFireability-14-0.sara
lola: state equation: calling and running sara
sara: try reading problem file GPPP-PT-C0100N0000010000-CTLFireability-14-0.sara.
lola: SUBRESULT
lola: result: yes
lola: produced by: state space
lola: The predicate is reachable.
lola: 607 markings, 606 edges
lola: ========================================
lola: SUBRESULT
lola: result: yes
lola: The Boolean predicate is true.
lola: ========================================

FORMULA GPPP-PT-C0100N0000010000-CTLFireability-1 TRUE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT TOPOLOGICAL STATE_COMPRESSION STUBBORN_SETS USE_NUPN UNFOLDING_TO_PT
lola: subprocess 15 will run for 2641 seconds at most (--localtimelimit=0)
lola: ========================================
lola: ...considering subproblem: (A (G ((NOT FIREABLE(generate) OR NOT FIREABLE(remove) OR NOT FIREABLE(Phosphoglucose_isomerase) OR NOT FIREABLE(Hexokinase)))) AND E (F (A (G (NOT FIREABLE(Ru5P_epimerase))))))
lola: ========================================
lola: SUBTASK
lola: checking a Boolean combination of formulas
lola: RUNNING
lola: subprocess 15 will run for 2641 seconds at most (--localtimelimit=0)
lola: ========================================
lola: ...considering subproblem: A (G ((NOT FIREABLE(generate) OR NOT FIREABLE(remove) OR NOT FIREABLE(Phosphoglucose_isomerase) OR NOT FIREABLE(Hexokinase))))
lola: ========================================
lola: SUBTASK
lola: checking invariance
lola: Planning: workflow for reachability check: stateequation||search (--findpath=off)
lola: rewrite Frontend/Parser/formula_rewrite.k:631
lola: rewrite Frontend/Parser/formula_rewrite.k:695
lola: processed formula: A (G ((NOT FIREABLE(generate) OR NOT FIREABLE(remove) OR NOT FIREABLE(Phosphoglucose_isomerase) OR NOT FIREABLE(Hexokinase))))
lola: processed formula length: 129
lola: 65 rewrites
lola: closed formula file GPPP-PT-C0100N0000010000-CTLFireability.task
lola: STORE
lola: using a simple compression encoder (--encoder=simplecompressed)
lola: using a prefix tree store (--store=prefix)
lola: SEARCH (state space)
lola: state space: using reachability graph (--search=depth)
lola: state space: using reachability preserving stubborn set method with insertion algorithm (--stubborn=tarjan)
lola: RUNNING
lola: rewrite Frontend/Parser/formula_rewrite.k:631
lola: rewrite Frontend/Parser/formula_rewrite.k:695
lola: formula 0: (FIREABLE(generate) AND FIREABLE(remove) AND FIREABLE(Phosphoglucose_isomerase) AND FIREABLE(Hexokinase))
lola: state equation: Generated DNF with 7 literals and 1 conjunctive subformulas
lola: state equation: write sara problem file to GPPP-PT-C0100N0000010000-CTLFireability-15-0.sara
lola: state equation: calling and running sara
sara: try reading problem file GPPP-PT-C0100N0000010000-CTLFireability-15-0.sara.
sara: place or transition ordering is non-deterministic
lola: sara is running 0 secs || 3822090 markings, 8655248 edges, 764418 markings/sec, 0 secs
lola: sara is running 5 secs || 7196546 markings, 16912225 edges, 674891 markings/sec, 5 secs

lola: state equation: solution impossible
lola: SUBRESULT
lola: result: yes
lola: produced by: state equation
lola: The predicate is invariant.
lola: ========================================
lola: Child process aborted or communication problem between parent and child process
lola: SUBRESULT
lola: result: unknown
lola: The Boolean predicate may be true or false.
lola: ========================================
lola: ========================================
lola: ...considering subproblem: E (X (E (F (FIREABLE(remove)))))
lola: ========================================
lola: SUBTASK
lola: checking reachability from a successor
lola: rewrite Frontend/Parser/formula_rewrite.k:626
lola: processed formula: FIREABLE(remove)
lola: processed formula length: 16
lola: 64 rewrites
lola: closed formula file GPPP-PT-C0100N0000010000-CTLFireability.task
lola: STORE
lola: using a simple compression encoder (--encoder=simplecompressed)
lola: using a prefix tree store (--store=prefix)
lola: SEARCH (state space /EXEF)
lola: state space: using reachability graph (EXef version) (--search=depth)
lola: state space: using reachability preserving stubborn set method with insertion algorithm (--stubborn=tarjan)
lola: RUNNING
lola: 4854046 markings, 8767402 edges, 970809 markings/sec, 0 secs
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lola: 401031933 markings, 691511813 edges, 770914 markings/sec, 505 secs
lola: 405176409 markings, 697731715 edges, 828895 markings/sec, 510 secs
lola: 409264056 markings, 703865976 edges, 817529 markings/sec, 515 secs
lola: 413419852 markings, 710102508 edges, 831159 markings/sec, 520 secs
lola: 417592928 markings, 716364954 edges, 834615 markings/sec, 525 secs
lola: 421388127 markings, 722060338 edges, 759040 markings/sec, 530 secs
lola: 422183036 markings, 723253258 edges, 158982 markings/sec, 535 secs
lola: 422191340 markings, 723265708 edges, 1661 markings/sec, 540 secs
lola: 422196229 markings, 723273046 edges, 978 markings/sec, 545 secs
lola: 422211560 markings, 723296052 edges, 3066 markings/sec, 550 secs
lola: 422240284 markings, 723339150 edges, 5745 markings/sec, 555 secs
lola: 422284164 markings, 723404988 edges, 8776 markings/sec, 560 secs
lola: 422308096 markings, 723440917 edges, 4786 markings/sec, 565 secs
lola: 422317936 markings, 723455686 edges, 1968 markings/sec, 570 secs
lola: 422328759 markings, 723471930 edges, 2165 markings/sec, 575 secs
lola: Child process aborted or communication problem between parent and child process

FORMULA GPPP-PT-C0100N0000010000-CTLFireability-4 CANNOT_COMPUTE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT TOPOLOGICAL STATE_COMPRESSION STUBBORN_SETS USE_NUPN UNFOLDING_TO_PT
lola: ========================================
lola: ...considering subproblem: (A (F (FIREABLE(G6P_dehydrogenase))) OR (E (G (A (F (FIREABLE(TIM_forward))))) OR A (X (FIREABLE(Aldolase)))))
lola: ========================================
lola: SUBTASK
lola: checking a Boolean combination of formulas
lola: RUNNING
lola: ========================================
lola: ...considering subproblem: A (F (FIREABLE(G6P_dehydrogenase)))
lola: ========================================
lola: SUBTASK
lola: checking eventual occurrence
lola: rewrite Frontend/Parser/formula_rewrite.k:659
lola: rewrite Frontend/Parser/formula_rewrite.k:694
lola: processed formula: NOT FIREABLE(G6P_dehydrogenase)
lola: processed formula length: 31
lola: 65 rewrites
lola: closed formula file GPPP-PT-C0100N0000010000-CTLFireability.task
lola: STORE
lola: using a simple compression encoder (--encoder=simplecompressed)
lola: using a prefix tree store (--store=prefix)
lola: SEARCH (state space / EG)
lola: state space: using search routine for EG formula (--search=depth)
lola: state space: using EG preserving stubborn set method (--stubborn=tarjan)
lola: RUNNING
lola: SUBRESULT
lola: result: no
lola: produced by: state space / EG
lola: The predicate does not eventually occur.
lola: 7 markings, 7 edges
lola: ========================================
lola: ========================================
lola: ...considering subproblem: E (G (A (F (FIREABLE(TIM_forward)))))
lola: ========================================
lola: SUBTASK
lola: checking CTL
lola: rewrite Frontend/Parser/formula_rewrite.k:732
lola: rewrite Frontend/Parser/formula_rewrite.k:724
lola: processed formula: NOT(A(TRUE U NOT(A(TRUE U FIREABLE(TIM_forward)))))
lola: processed formula length: 51
lola: 65 rewrites
lola: closed formula file GPPP-PT-C0100N0000010000-CTLFireability.task
lola: STORE
lola: using a simple compression encoder (--encoder=simplecompressed)
lola: using a prefix tree store (--store=prefix)
lola: Using CTL preserving stubborn sets
lola: RUNNING
lola: CTL formula contains 2 significant temporal operators and needs 9 bytes of payload
lola: Ignoring fairness constraints (--fair).
lola: 2666709 markings, 7273654 edges, 533342 markings/sec, 0 secs
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lola: 132433179 markings, 413976872 edges, 285895 markings/sec, 385 secs
lola: 133866028 markings, 418624045 edges, 286570 markings/sec, 390 secs
lola: 135265199 markings, 423187985 edges, 279834 markings/sec, 395 secs
lola: 136805551 markings, 427954488 edges, 308070 markings/sec, 400 secs
lola: 138737625 markings, 433784103 edges, 386415 markings/sec, 405 secs
lola: 140359057 markings, 438928434 edges, 324286 markings/sec, 410 secs
lola: 141877419 markings, 443813067 edges, 303672 markings/sec, 415 secs
lola: 143340043 markings, 448551021 edges, 292525 markings/sec, 420 secs
lola: 144771137 markings, 453189612 edges, 286219 markings/sec, 425 secs
lola: 146181620 markings, 457759289 edges, 282097 markings/sec, 430 secs
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lola: 194357339 markings, 611455158 edges, 280847 markings/sec, 590 secs
lola: 195771330 markings, 616052343 edges, 282798 markings/sec, 595 secs
lola: 197113387 markings, 620439793 edges, 268411 markings/sec, 600 secs
lola: 198506996 markings, 624984277 edges, 278722 markings/sec, 605 secs
lola: 199982451 markings, 629572099 edges, 295091 markings/sec, 610 secs
lola: 201892211 markings, 635248353 edges, 381952 markings/sec, 615 secs
lola: 203518950 markings, 640441374 edges, 325348 markings/sec, 620 secs
lola: 205068084 markings, 645409811 edges, 309827 markings/sec, 625 secs
lola: 206553890 markings, 650197237 edges, 297161 markings/sec, 630 secs
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lola: 210791602 markings, 663936644 edges, 280138 markings/sec, 645 secs
lola: 212174326 markings, 668443180 edges, 276545 markings/sec, 650 secs
lola: 213526319 markings, 672825331 edges, 270399 markings/sec, 655 secs
lola: 214915192 markings, 677356545 edges, 277775 markings/sec, 660 secs
lola: 216244897 markings, 681687392 edges, 265941 markings/sec, 665 secs
lola: 216282850 markings, 681807869 edges, 7591 markings/sec, 670 secs
lola: 216321771 markings, 681937947 edges, 7784 markings/sec, 675 secs
lola: 216332390 markings, 681970898 edges, 2124 markings/sec, 680 secs
lola: 216338391 markings, 681989762 edges, 1200 markings/sec, 685 secs
lola: 216345399 markings, 682014657 edges, 1402 markings/sec, 690 secs
lola: 216350754 markings, 682033667 edges, 1071 markings/sec, 695 secs
lola: 216353453 markings, 682041629 edges, 540 markings/sec, 700 secs
lola: 216366541 markings, 682087043 edges, 2618 markings/sec, 705 secs
lola: 216371284 markings, 682103885 edges, 949 markings/sec, 710 secs
lola: 216374688 markings, 682114985 edges, 681 markings/sec, 715 secs
lola: 216396101 markings, 682181170 edges, 4283 markings/sec, 720 secs
lola: 216403468 markings, 682205182 edges, 1473 markings/sec, 725 secs
lola: 216412276 markings, 682236308 edges, 1762 markings/sec, 730 secs
lola: 216417155 markings, 682252153 edges, 976 markings/sec, 735 secs
lola: Child process aborted or communication problem between parent and child process
lola: ========================================
lola: ...considering subproblem: A (X (FIREABLE(Aldolase)))
lola: ========================================
lola: SUBTASK
lola: checking CTL
lola: rewrite Frontend/Parser/formula_rewrite.k:734
lola: processed formula: AX(FIREABLE(Aldolase))
lola: processed formula length: 22
lola: 64 rewrites
lola: closed formula file GPPP-PT-C0100N0000010000-CTLFireability.task
lola: STORE
lola: using a simple compression encoder (--encoder=simplecompressed)
lola: using a prefix tree store (--store=prefix)
lola: Using CTL preserving stubborn sets
lola: RUNNING
lola: CTL formula contains 0 significant temporal operators and needs 0 bytes of payload
lola: Ignoring fairness constraints (--fair).
lola: SUBRESULT
lola: result: no
lola: produced by: CTL model checker
lola: The net does not satisfy the given formula.
lola: 0 markings, 0 edges
lola: SUBRESULT
lola: result: unknown
lola: ========================================
lola: The Boolean predicate may be true or false.
lola: ========================================

FORMULA GPPP-PT-C0100N0000010000-CTLFireability-5 CANNOT_COMPUTE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT TOPOLOGICAL STATE_COMPRESSION STUBBORN_SETS USE_NUPN UNFOLDING_TO_PT
lola: ========================================
lola: ...considering subproblem: E (F (A (G ((FIREABLE(Transketolase2) OR FIREABLE(Glutathione_oxidation))))))
lola: ========================================
lola: SUBTASK
lola: checking possible invariance
lola: AGEF init
lola: rewrite Frontend/Parser/formula_rewrite.k:636
lola: rewrite Frontend/Parser/formula_rewrite.k:694
lola: processed formula: (NOT FIREABLE(Transketolase2) AND NOT FIREABLE(Glutathione_oxidation))
lola: processed formula length: 70
lola: 65 rewrites
lola: closed formula file GPPP-PT-C0100N0000010000-CTLFireability.task
lola: STORE
lola: using a simple compression encoder (--encoder=simplecompressed)
lola: using a prefix tree store (--store=prefix)
lola: SEARCH
lola: using tscc preserving stubborn set method (--stubborn)
lola: RUNNING
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lola: 375449848 markings, 1678217517 edges, 374806 markings/sec, 1030 secs
lola: 377317285 markings, 1686347309 edges, 373487 markings/sec, 1035 secs
lola: 379138988 markings, 1694942340 edges, 364341 markings/sec, 1040 secs
lola: 380845123 markings, 1703046975 edges, 341227 markings/sec, 1045 secs
lola: 382617441 markings, 1711110191 edges, 354464 markings/sec, 1050 secs
lola: 384551398 markings, 1719331585 edges, 386791 markings/sec, 1055 secs
lola: 386427422 markings, 1727304983 edges, 375205 markings/sec, 1060 secs
lola: 388042695 markings, 1734765191 edges, 323055 markings/sec, 1065 secs
lola: 389542815 markings, 1741915126 edges, 300024 markings/sec, 1070 secs
lola: 391007096 markings, 1748900052 edges, 292856 markings/sec, 1075 secs
lola: 392617932 markings, 1756263725 edges, 322167 markings/sec, 1080 secs
lola: 394178648 markings, 1763496708 edges, 312143 markings/sec, 1085 secs
lola: 395634833 markings, 1770723490 edges, 291237 markings/sec, 1090 secs
lola: 397325009 markings, 1777379575 edges, 338035 markings/sec, 1095 secs
lola: 398896639 markings, 1783551480 edges, 314326 markings/sec, 1100 secs
lola: 400221706 markings, 1789994651 edges, 265013 markings/sec, 1105 secs
lola: 401908864 markings, 1796720702 edges, 337432 markings/sec, 1110 secs
lola: 404009519 markings, 1805866383 edges, 420131 markings/sec, 1115 secs
lola: 405991722 markings, 1814496046 edges, 396441 markings/sec, 1120 secs
lola: 407790137 markings, 1822321596 edges, 359683 markings/sec, 1125 secs
lola: 409714140 markings, 1830823095 edges, 384801 markings/sec, 1130 secs
lola: 411422526 markings, 1838938343 edges, 341677 markings/sec, 1135 secs
lola: 412241820 markings, 1842830104 edges, 163859 markings/sec, 1140 secs
lola: 412253645 markings, 1842888214 edges, 2365 markings/sec, 1145 secs
lola: 412258151 markings, 1842909405 edges, 901 markings/sec, 1150 secs
lola: 412261850 markings, 1842925083 edges, 740 markings/sec, 1155 secs
lola: 412274968 markings, 1842989623 edges, 2624 markings/sec, 1160 secs
lola: 412287677 markings, 1843047970 edges, 2542 markings/sec, 1165 secs
lola: 412297707 markings, 1843097653 edges, 2006 markings/sec, 1170 secs
lola: 412311106 markings, 1843159363 edges, 2680 markings/sec, 1175 secs
lola: 412316399 markings, 1843185271 edges, 1059 markings/sec, 1180 secs
lola: 412329754 markings, 1843247759 edges, 2671 markings/sec, 1185 secs
lola: 412334488 markings, 1843270604 edges, 947 markings/sec, 1190 secs
lola: 412337870 markings, 1843287358 edges, 676 markings/sec, 1195 secs
lola: 412339389 markings, 1843294595 edges, 304 markings/sec, 1200 secs
lola: 412347227 markings, 1843333146 edges, 1568 markings/sec, 1205 secs
lola: 412351924 markings, 1843353500 edges, 939 markings/sec, 1210 secs
lola: 412357440 markings, 1843379709 edges, 1103 markings/sec, 1215 secs
lola: 412369574 markings, 1843439408 edges, 2427 markings/sec, 1220 secs
lola: 412373254 markings, 1843455632 edges, 736 markings/sec, 1225 secs
lola: 412383479 markings, 1843504119 edges, 2045 markings/sec, 1230 secs
lola: 412388027 markings, 1843526266 edges, 910 markings/sec, 1235 secs
lola: 412399301 markings, 1843578191 edges, 2255 markings/sec, 1240 secs
lola: 412402787 markings, 1843594944 edges, 697 markings/sec, 1245 secs
lola: 412424492 markings, 1843698011 edges, 4341 markings/sec, 1250 secs
lola: 412429337 markings, 1843721885 edges, 969 markings/sec, 1255 secs
lola: 412432603 markings, 1843738089 edges, 653 markings/sec, 1260 secs
lola: 412442574 markings, 1843784573 edges, 1994 markings/sec, 1265 secs
lola: 412445421 markings, 1843797260 edges, 569 markings/sec, 1270 secs
lola: 412461914 markings, 1843878048 edges, 3299 markings/sec, 1275 secs
lola: Child process aborted or communication problem between parent and child process

FORMULA GPPP-PT-C0100N0000010000-CTLFireability-2 CANNOT_COMPUTE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT TOPOLOGICAL STATE_COMPRESSION STUBBORN_SETS USE_NUPN UNFOLDING_TO_PT
lola: ========================================
lola: ...considering subproblem: (A (G ((NOT FIREABLE(generate) OR NOT FIREABLE(remove) OR NOT FIREABLE(Phosphoglucose_isomerase) OR NOT FIREABLE(Hexokinase)))) AND E (F (A (G (NOT FIREABLE(Ru5P_epimerase))))))
lola: ========================================
lola: SUBTASK
lola: checking a Boolean combination of formulas
lola: RUNNING
lola: ========================================
lola: ...considering subproblem: A (G ((NOT FIREABLE(generate) OR NOT FIREABLE(remove) OR NOT FIREABLE(Phosphoglucose_isomerase) OR NOT FIREABLE(Hexokinase))))
lola: ========================================
lola: SUBTASK
lola: checking invariance
lola: Planning: workflow for reachability check: stateequation||search (--findpath=off)
lola: rewrite Frontend/Parser/formula_rewrite.k:631
lola: rewrite Frontend/Parser/formula_rewrite.k:695
lola: processed formula: A (G ((NOT FIREABLE(generate) OR NOT FIREABLE(remove) OR NOT FIREABLE(Phosphoglucose_isomerase) OR NOT FIREABLE(Hexokinase))))
lola: processed formula length: 129
lola: 65 rewrites
lola: closed formula file GPPP-PT-C0100N0000010000-CTLFireability.task
lola: STORE
lola: using a simple compression encoder (--encoder=simplecompressed)
lola: using a prefix tree store (--store=prefix)
lola: SEARCH (state space)
lola: state space: using reachability graph (--search=depth)
lola: state space: using reachability preserving stubborn set method with insertion algorithm (--stubborn=tarjan)
lola: RUNNING
lola: rewrite Frontend/Parser/formula_rewrite.k:631
lola: rewrite Frontend/Parser/formula_rewrite.k:695
lola: formula 0: (FIREABLE(generate) AND FIREABLE(remove) AND FIREABLE(Phosphoglucose_isomerase) AND FIREABLE(Hexokinase))
lola: state equation: Generated DNF with 7 literals and 1 conjunctive subformulas
lola: state equation: write sara problem file to GPPP-PT-C0100N0000010000-CTLFireability-19-0.sara
lola: state equation: calling and running sara
sara: try reading problem file GPPP-PT-C0100N0000010000-CTLFireability-19-0.sara.
sara: place or transition ordering is non-deterministic
lola: sara is running 0 secs || 3629268 markings, 8196990 edges, 725854 markings/sec, 0 secs
lola: sara is running 5 secs || 6937407 markings, 16287754 edges, 661628 markings/sec, 5 secs

lola: state equation: solution impossible
lola: SUBRESULT
lola: result: yes
lola: produced by: state equation
lola: The predicate is invariant.
lola: ========================================
lola: ========================================
lola: ...considering subproblem: E (F (A (G (NOT FIREABLE(Ru5P_epimerase)))))
lola: ========================================
lola: SUBTASK
lola: checking possible invariance
lola: AGEF init
lola: rewrite Frontend/Parser/formula_rewrite.k:636
lola: rewrite Frontend/Parser/formula_rewrite.k:695
lola: processed formula: FIREABLE(Ru5P_epimerase)
lola: processed formula length: 24
lola: 65 rewrites
lola: closed formula file GPPP-PT-C0100N0000010000-CTLFireability.task
lola: STORE
lola: using a simple compression encoder (--encoder=simplecompressed)
lola: using a prefix tree store (--store=prefix)
lola: SEARCH
lola: using tscc preserving stubborn set method (--stubborn)
lola: RUNNING
lola: SUBRESULT
lola: result: yes
lola: produced by: tscc_search
lola: The predicate is cwpossibly invariant.
lola: 1276 markings, 1275 edges
lola: lola: SUBRESULT
lola: result: yes
lola: The Boolean predicate is true.
========================================
lola: ========================================

FORMULA GPPP-PT-C0100N0000010000-CTLFireability-0 TRUE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT TOPOLOGICAL STATE_COMPRESSION STUBBORN_SETS USE_NUPN UNFOLDING_TO_PT
lola: RESULT
lola:
SUMMARY: yes yes unknown yes unknown unknown yes yes no no yes yes yes yes yes yes
lola:
preliminary result: yes yes unknown yes unknown unknown yes yes no no yes yes yes yes yes yes
lola: memory consumption: 12984 KB
lola: time consumption: 3569 seconds

BK_STOP 1526743459278

--------------------
content from stderr:

Sequence of Actions to be Executed by the VM

This is useful if one wants to reexecute the tool in the VM from the submitted image disk.

set -x
# this is for BenchKit: configuration of major elements for the test
export BK_INPUT="GPPP-PT-C0100N0000010000"
export BK_EXAMINATION="CTLFireability"
export BK_TOOL="lola"
export BK_RESULT_DIR="/tmp/BK_RESULTS/OUTPUTS"
export BK_TIME_CONFINEMENT="3600"
export BK_MEMORY_CONFINEMENT="16384"

# this is specific to your benchmark or test

export BIN_DIR="$HOME/BenchKit/bin"

# remove the execution directoty if it exists (to avoid increse of .vmdk images)
if [ -d execution ] ; then
rm -rf execution
fi

tar xzf /home/mcc/BenchKit/INPUTS/GPPP-PT-C0100N0000010000.tgz
mv GPPP-PT-C0100N0000010000 execution
cd execution
pwd
ls -lh

# this is for BenchKit: explicit launching of the test
echo "====================================================================="
echo " Generated by BenchKit 2-3637"
echo " Executing tool lola"
echo " Input is GPPP-PT-C0100N0000010000, examination is CTLFireability"
echo " Time confinement is $BK_TIME_CONFINEMENT seconds"
echo " Memory confinement is 16384 MBytes"
echo " Number of cores is 4"
echo " Run identifier is r088-blw7-152649998400326"
echo "====================================================================="
echo
echo "--------------------"
echo "content from stdout:"
echo
echo "=== Data for post analysis generated by BenchKit (invocation template)"
echo
if [ "CTLFireability" = "UpperBounds" ] ; then
echo "The expected result is a vector of positive values"
echo NUM_VECTOR
elif [ "CTLFireability" != "StateSpace" ] ; then
echo "The expected result is a vector of booleans"
echo BOOL_VECTOR
else
echo "no data necessary for post analysis"
fi
echo
if [ -f "CTLFireability.txt" ] ; then
echo "here is the order used to build the result vector(from text file)"
for x in $(grep Property CTLFireability.txt | cut -d ' ' -f 2 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ -f "CTLFireability.xml" ] ; then # for cunf (txt files deleted;-)
echo echo "here is the order used to build the result vector(from xml file)"
for x in $(grep '' CTLFireability.xml | cut -d '>' -f 2 | cut -d '<' -f 1 | sort -u) ; do
echo "FORMULA_NAME $x"
done
fi
echo
echo "=== Now, execution of the tool begins"
echo
echo -n "BK_START "
date -u +%s%3N
echo
timeout -s 9 $BK_TIME_CONFINEMENT bash -c "/home/mcc/BenchKit/BenchKit_head.sh 2> STDERR ; echo ; echo -n \"BK_STOP \" ; date -u +%s%3N"
if [ $? -eq 137 ] ; then
echo
echo "BK_TIME_CONFINEMENT_REACHED"
fi
echo
echo "--------------------"
echo "content from stderr:"
echo
cat STDERR ;