About the Execution of LoLA for GPPP-PT-C0100N0000000100
| Execution Summary | |||||
| Max Memory Used (MB) |
Time wait (ms) | CPU Usage (ms) | I/O Wait (ms) | Computed Result | Execution Status |
| 15919.110 | 1319432.00 | 2158740.00 | 9228.80 | FTTTTTTFTTF?TT?F | normal |
Execution Chart
We display below the execution chart for this examination (boot time has been removed).
Trace from the execution
Waiting for the VM to be ready (probing ssh)
................
/home/mcc/execution
total 184K
-rw-r--r-- 1 mcc users 3.2K May 15 18:54 CTLCardinality.txt
-rw-r--r-- 1 mcc users 17K May 15 18:54 CTLCardinality.xml
-rw-r--r-- 1 mcc users 2.9K May 15 18:54 CTLFireability.txt
-rw-r--r-- 1 mcc users 15K May 15 18:54 CTLFireability.xml
-rw-r--r-- 1 mcc users 4.0K May 15 18:50 GenericPropertiesDefinition.xml
-rw-r--r-- 1 mcc users 5.7K May 15 18:50 GenericPropertiesVerdict.xml
-rw-r--r-- 1 mcc users 2.5K May 15 18:54 LTLCardinality.txt
-rw-r--r-- 1 mcc users 12K May 15 18:54 LTLCardinality.xml
-rw-r--r-- 1 mcc users 2.3K May 15 18:54 LTLFireability.txt
-rw-r--r-- 1 mcc users 11K May 15 18:54 LTLFireability.xml
-rw-r--r-- 1 mcc users 3.7K May 15 18:54 ReachabilityCardinality.txt
-rw-r--r-- 1 mcc users 19K May 15 18:54 ReachabilityCardinality.xml
-rw-r--r-- 1 mcc users 115 May 15 18:54 ReachabilityDeadlock.txt
-rw-r--r-- 1 mcc users 353 May 15 18:54 ReachabilityDeadlock.xml
-rw-r--r-- 1 mcc users 3.4K May 15 18:54 ReachabilityFireability.txt
-rw-r--r-- 1 mcc users 16K May 15 18:54 ReachabilityFireability.xml
-rw-r--r-- 1 mcc users 1.7K May 15 18:54 UpperBounds.txt
-rw-r--r-- 1 mcc users 3.8K May 15 18:54 UpperBounds.xml
-rw-r--r-- 1 mcc users 6 May 15 18:50 equiv_col
-rw-r--r-- 1 mcc users 17 May 15 18:50 instance
-rw-r--r-- 1 mcc users 6 May 15 18:50 iscolored
-rw-r--r-- 1 mcc users 21K May 15 18:50 model.pnml
=====================================================================
Generated by BenchKit 2-3637
Executing tool lola
Input is GPPP-PT-C0100N0000000100, examination is ReachabilityFireability
Time confinement is 3600 seconds
Memory confinement is 16384 MBytes
Number of cores is 4
Run identifier is r088-blw7-152649998300315
=====================================================================
--------------------
content from stdout:
=== Data for post analysis generated by BenchKit (invocation template)
The expected result is a vector of booleans
BOOL_VECTOR
here is the order used to build the result vector(from text file)
FORMULA_NAME GPPP-PT-C0100N0000000100-ReachabilityFireability-00
FORMULA_NAME GPPP-PT-C0100N0000000100-ReachabilityFireability-01
FORMULA_NAME GPPP-PT-C0100N0000000100-ReachabilityFireability-02
FORMULA_NAME GPPP-PT-C0100N0000000100-ReachabilityFireability-03
FORMULA_NAME GPPP-PT-C0100N0000000100-ReachabilityFireability-04
FORMULA_NAME GPPP-PT-C0100N0000000100-ReachabilityFireability-05
FORMULA_NAME GPPP-PT-C0100N0000000100-ReachabilityFireability-06
FORMULA_NAME GPPP-PT-C0100N0000000100-ReachabilityFireability-07
FORMULA_NAME GPPP-PT-C0100N0000000100-ReachabilityFireability-08
FORMULA_NAME GPPP-PT-C0100N0000000100-ReachabilityFireability-09
FORMULA_NAME GPPP-PT-C0100N0000000100-ReachabilityFireability-10
FORMULA_NAME GPPP-PT-C0100N0000000100-ReachabilityFireability-11
FORMULA_NAME GPPP-PT-C0100N0000000100-ReachabilityFireability-12
FORMULA_NAME GPPP-PT-C0100N0000000100-ReachabilityFireability-13
FORMULA_NAME GPPP-PT-C0100N0000000100-ReachabilityFireability-14
FORMULA_NAME GPPP-PT-C0100N0000000100-ReachabilityFireability-15
=== Now, execution of the tool begins
BK_START 1526731452763
info: Time: 3600 - MCC
===========================================================================================
prep: translating GPPP-PT-C0100N0000000100 Petri net model.pnml into LoLA format
===========================================================================================
prep: translating PT Petri net complete
prep: check for too many tokens
===========================================================================================
prep: translating GPPP-PT-C0100N0000000100 formula ReachabilityFireability into LoLA format
===========================================================================================
prep: translating PT formula complete
vrfy: Checking ReachabilityFireability @ GPPP-PT-C0100N0000000100 @ 3570 seconds
lola: LoLA will run for 3570 seconds at most (--timelimit)
lola: NET
lola: reading net from model.pnml.lola
lola: finished parsing
lola: closed net file model.pnml.lola
lola: 55/65536 symbol table entries, 0 collisions
lola: preprocessing...
lola: Size of bit vector: 1056
lola: finding significant places
lola: 33 places, 22 transitions, 21 significant places
lola: computing forward-conflicting sets
lola: computing back-conflicting sets
lola: 30 transition conflict sets
lola: TASK
lola: reading formula from GPPP-PT-C0100N0000000100-ReachabilityFireability.task
lola: E (F ((FIREABLE(remove)))) : A (G ((FIREABLE(Phosphofructokinase) OR NOT FIREABLE(remove) OR (NOT FIREABLE(Phosphoglycerate_kinase) AND NOT FIREABLE(Phosphofructokinase) AND FIREABLE(Ru5P_epimerase) AND NOT FIREABLE(Glutathione_oxidation))))) : E (F (FIREABLE(Enolase))) : E (F (FIREABLE(Enolase))) : E (F (((NOT FIREABLE(Aldolase)) AND FIREABLE(Enolase) AND ((FIREABLE(Aldolase) AND FIREABLE(Glutathione_oxidation) AND NOT FIREABLE(Pyruvate_kinase)) OR FIREABLE(Phosphofructokinase))))) : A (G (())) : A (G ((NOT FIREABLE(remove) OR NOT FIREABLE(Transketolase1)))) : E (F (())) : E (F ((FIREABLE(GAP_dehydrogenase) AND (FIREABLE(Phosphoclucose_isomerase) OR (NOT FIREABLE(TIM_backward) AND NOT FIREABLE(Transketolase1)))))) : E (F ((FIREABLE(Glutathione_reductose) AND ((FIREABLE(Transaldolase) AND FIREABLE(Glutathione_oxidation) AND NOT FIREABLE(Hexokinase)) OR FIREABLE(generate))))) : A (G ((NOT FIREABLE(Phosphoglycerate_mutase) OR NOT FIREABLE(Aldolase) OR (NOT FIREABLE(Phosphoglycerate_mutase) AND NOT FIREABLE(TIM_backward)) OR NOT FIREABLE(Glutathione_reductose)))) : A (G ((NOT FIREABLE(Enolase) OR ((FIREABLE(TIM_forward) OR FIREABLE(Phosphoclucose_isomerase)) AND NOT FIREABLE(TIM_backward) AND FIREABLE(Glutathione_oxidation) AND FIREABLE(Phosphofructokinase))))) : A (G ((NOT FIREABLE(Glutathione_oxidation) OR NOT FIREABLE(Ru5P_isomerase) OR NOT FIREABLE(Transketolase1) OR NOT FIREABLE(G6P_dehydrogenase) OR NOT FIREABLE(Lactate_dehydrogenase)))) : A (G (())) : E (F ((FIREABLE(GAP_dehydrogenase) AND FIREABLE(generate) AND FIREABLE(Phosphoglycerate_kinase) AND NOT FIREABLE(Pyruvate_kinase)))) : E (F (FIREABLE(remove)))
lola: rewrite Frontend/Parser/formula_rewrite.k:100
lola: rewrite Frontend/Parser/formula_rewrite.k:160
lola: rewrite Frontend/Parser/formula_rewrite.k:151
lola: rewrite Frontend/Parser/formula_rewrite.k:98
lola: rewrite Frontend/Parser/formula_rewrite.k:157
lola: rewrite Frontend/Parser/formula_rewrite.k:148
lola: rewrite Frontend/Parser/formula_rewrite.k:100
lola: rewrite Frontend/Parser/formula_rewrite.k:160
lola: rewrite Frontend/Parser/formula_rewrite.k:151
lola: computing a collection of formulas
lola: RUNNING
lola: subprocess 0 will run for 223 seconds at most (--localtimelimit=0)
lola: ========================================
lola: ...considering subproblem: TRUE
lola: ========================================
lola: SUBTASK
lola: checking initial satisfaction
lola: processed formula: TRUE
lola: processed formula length: 4
lola: 9 rewrites
lola: closed formula file GPPP-PT-C0100N0000000100-ReachabilityFireability.task
lola: processed formula with 0 atomic propositions
lola: RUNNING
lola: SUBRESULT
lola: result: yes
lola: produced by: preprocessing
lola: The net satisfies the property already in its initial state.
lola: 0 markings, 0 edges
lola: ========================================
FORMULA GPPP-PT-C0100N0000000100-ReachabilityFireability-5 TRUE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT TOPOLOGICAL STATE_COMPRESSION STUBBORN_SETS USE_NUPN UNFOLDING_TO_PT
lola: subprocess 1 will run for 238 seconds at most (--localtimelimit=0)
lola: ========================================
lola: ...considering subproblem: FALSE
lola: ========================================
lola: SUBTASK
lola: checking initial satisfaction
lola: processed formula: FALSE
lola: processed formula length: 5
lola: 9 rewrites
lola: closed formula file GPPP-PT-C0100N0000000100-ReachabilityFireability.task
lola: processed formula with 0 atomic propositions
lola: RUNNING
lola: SUBRESULT
lola: result: no
lola: produced by: preprocessing
lola: The net violates the given property already in its initial state.
lola: 0 markings, 0 edges
lola: ========================================
FORMULA GPPP-PT-C0100N0000000100-ReachabilityFireability-7 FALSE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT TOPOLOGICAL STATE_COMPRESSION STUBBORN_SETS USE_NUPN UNFOLDING_TO_PT
lola: subprocess 2 will run for 255 seconds at most (--localtimelimit=0)
lola: ========================================
lola: ...considering subproblem: TRUE
lola: ========================================
lola: SUBTASK
lola: checking initial satisfaction
lola: processed formula: TRUE
lola: processed formula length: 4
lola: 9 rewrites
lola: closed formula file GPPP-PT-C0100N0000000100-ReachabilityFireability.task
lola: processed formula with 0 atomic propositions
lola: RUNNING
lola: SUBRESULT
lola: result: yes
lola: produced by: preprocessing
lola: The net satisfies the property already in its initial state.
lola: 0 markings, 0 edges
lola: ========================================
FORMULA GPPP-PT-C0100N0000000100-ReachabilityFireability-13 TRUE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT TOPOLOGICAL STATE_COMPRESSION STUBBORN_SETS USE_NUPN UNFOLDING_TO_PT
lola: subprocess 3 will run for 274 seconds at most (--localtimelimit=0)
lola: ========================================
lola: ...considering subproblem: E (F ((FIREABLE(remove))))
lola: ========================================
lola: SUBTASK
lola: checking reachability
lola: Planning: workflow for reachability check: stateequation||search (--findpath=off)
lola: rewrite Frontend/Parser/formula_rewrite.k:625
lola: processed formula: E (F ((FIREABLE(remove))))
lola: processed formula length: 26
lola: 10 rewrites
lola: closed formula file GPPP-PT-C0100N0000000100-ReachabilityFireability.task
lola: STORE
lola: using a simple compression encoder (--encoder=simplecompressed)
lola: using a prefix tree store (--store=prefix)
lola: SEARCH (state space)
lola: state space: using reachability graph (--search=depth)
lola: state space: using reachability preserving stubborn set method with insertion algorithm (--stubborn=tarjan)
lola: RUNNING
lola: rewrite Frontend/Parser/formula_rewrite.k:625
lola: formula 0: (FIREABLE(remove))
lola: state equation: Generated DNF with 2 literals and 1 conjunctive subformulas
lola: state equation: write sara problem file to GPPP-PT-C0100N0000000100-ReachabilityFireability-3-0.sara
lola: state equation: calling and running sara
sara: try reading problem file GPPP-PT-C0100N0000000100-ReachabilityFireability-3-0.sara.
sara: place or transition ordering is non-deterministic
lola: state equation: solution impossible
lola: SUBRESULT
lola: result: no
lola: produced by: state equation
lola: The predicate is unreachable.
lola: ========================================
FORMULA GPPP-PT-C0100N0000000100-ReachabilityFireability-0 FALSE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT TOPOLOGICAL STATE_COMPRESSION STUBBORN_SETS USE_NUPN UNFOLDING_TO_PT
lola: subprocess 4 will run for 297 seconds at most (--localtimelimit=0)
lola: ========================================
lola: ...considering subproblem: E (F (FIREABLE(Enolase)))
lola: ========================================
lola: SUBTASK
lola: checking reachability
lola: Planning: workflow for reachability check: stateequation||search (--findpath=off)
lola: rewrite Frontend/Parser/formula_rewrite.k:625
lola: processed formula: E (F (FIREABLE(Enolase)))
lola: processed formula length: 25
lola: 10 rewrites
lola: closed formula file GPPP-PT-C0100N0000000100-ReachabilityFireability.task
lola: STORE
lola: using a simple compression encoder (--encoder=simplecompressed)
lola: using a prefix tree store (--store=prefix)
lola: SEARCH (state space)
lola: state space: using reachability graph (--search=depth)
lola: state space: using reachability preserving stubborn set method with insertion algorithm (--stubborn=tarjan)
lola: RUNNING
lola: rewrite Frontend/Parser/formula_rewrite.k:625
lola: SUBRESULT
lola: result: yes
lola: produced by: state space
lola: The predicate is reachable.
lola: 17 markings, 16 edges
lola: ========================================
FORMULA GPPP-PT-C0100N0000000100-ReachabilityFireability-2 TRUE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT TOPOLOGICAL STATE_COMPRESSION STUBBORN_SETS USE_NUPN UNFOLDING_TO_PT
lola: subprocess 5 will run for 324 seconds at most (--localtimelimit=0)
lola: ========================================
lola: ...considering subproblem: E (F (FIREABLE(Enolase)))
lola: ========================================
lola: SUBTASK
lola: checking reachability
lola: Planning: workflow for reachability check: stateequation||search (--findpath=off)
lola: rewrite Frontend/Parser/formula_rewrite.k:625
lola: processed formula: E (F (FIREABLE(Enolase)))
lola: processed formula length: 25
lola: 10 rewrites
lola: closed formula file GPPP-PT-C0100N0000000100-ReachabilityFireability.task
lola: STORE
lola: using a simple compression encoder (--encoder=simplecompressed)
lola: using a prefix tree store (--store=prefix)
lola: SEARCH (state space)
lola: state space: using reachability graph (--search=depth)
lola: state space: using reachability preserving stubborn set method with insertion algorithm (--stubborn=tarjan)
lola: RUNNING
lola: rewrite Frontend/Parser/formula_rewrite.k:625
lola: formula 0: FIREABLE(Enolase)
lola: state equation: Generated DNF with 1 literals and 1 conjunctive subformulas
lola: SUBRESULT
lola: result: yes
lola: produced by: state space
lola: The predicate is reachable.
lola: 17 markings, 16 edges
lola: ========================================
FORMULA GPPP-PT-C0100N0000000100-ReachabilityFireability-3 TRUE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT TOPOLOGICAL STATE_COMPRESSION STUBBORN_SETS USE_NUPN UNFOLDING_TO_PT
lola: subprocess 6 will run for 356 seconds at most (--localtimelimit=0)
lola: ========================================
lola: ...considering subproblem: E (F (FIREABLE(remove)))
lola: ========================================
lola: SUBTASK
lola: checking reachability
lola: Planning: workflow for reachability check: stateequation||search (--findpath=off)
lola: rewrite Frontend/Parser/formula_rewrite.k:625
lola: processed formula: E (F (FIREABLE(remove)))
lola: processed formula length: 24
lola: 10 rewrites
lola: closed formula file GPPP-PT-C0100N0000000100-ReachabilityFireability.task
lola: STORE
lola: using a simple compression encoder (--encoder=simplecompressed)
lola: using a prefix tree store (--store=prefix)
lola: SEARCH (state space)
lola: state space: using reachability graph (--search=depth)
lola: state space: using reachability preserving stubborn set method with insertion algorithm (--stubborn=tarjan)
lola: RUNNING
lola: rewrite Frontend/Parser/formula_rewrite.k:625
lola: formula 0: FIREABLE(remove)
lola: state equation: Generated DNF with 2 literals and 1 conjunctive subformulas
lola: state equation: write sara problem file to GPPP-PT-C0100N0000000100-ReachabilityFireability-6-0.sara
lola: state equation: calling and running sara
sara: try reading problem file GPPP-PT-C0100N0000000100-ReachabilityFireability-6-0.sara.
sara: place or transition ordering is non-deterministic
lola: state equation: solution impossible
lola: SUBRESULT
lola: result: no
lola: produced by: state equation
lola: The predicate is unreachable.
lola: ========================================
FORMULA GPPP-PT-C0100N0000000100-ReachabilityFireability-15 FALSE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT TOPOLOGICAL STATE_COMPRESSION STUBBORN_SETS USE_NUPN UNFOLDING_TO_PT
lola: subprocess 7 will run for 396 seconds at most (--localtimelimit=0)
lola: ========================================
lola: ...considering subproblem: A (G ((NOT FIREABLE(remove) OR NOT FIREABLE(Transketolase1))))
lola: ========================================
lola: SUBTASK
lola: checking invariance
lola: Planning: workflow for reachability check: stateequation||search (--findpath=off)
lola: rewrite Frontend/Parser/formula_rewrite.k:631
lola: rewrite Frontend/Parser/formula_rewrite.k:694
lola: processed formula: A (G ((NOT FIREABLE(remove) OR NOT FIREABLE(Transketolase1))))
lola: processed formula length: 63
lola: 11 rewrites
lola: closed formula file GPPP-PT-C0100N0000000100-ReachabilityFireability.task
lola: STORE
lola: using a simple compression encoder (--encoder=simplecompressed)
lola: using a prefix tree store (--store=prefix)
lola: SEARCH (state space)
lola: state space: using reachability graph (--search=depth)
lola: state space: using reachability preserving stubborn set method with insertion algorithm (--stubborn=tarjan)
lola: RUNNING
lola: rewrite Frontend/Parser/formula_rewrite.k:631
lola: rewrite Frontend/Parser/formula_rewrite.k:694
lola: formula 0: (FIREABLE(remove) AND FIREABLE(Transketolase1))
lola: state equation: Generated DNF with 4 literals and 1 conjunctive subformulas
lola: state equation: write sara problem file to GPPP-PT-C0100N0000000100-ReachabilityFireability-7-0.sara
lola: state equation: calling and running sara
sara: try reading problem file GPPP-PT-C0100N0000000100-ReachabilityFireability-7-0.sara.
sara: place or transition ordering is non-deterministic
lola: state equation: solution impossible
lola: SUBRESULT
lola: result: yes
lola: produced by: state equation
lola: The predicate is invariant.
lola: ========================================
FORMULA GPPP-PT-C0100N0000000100-ReachabilityFireability-6 TRUE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT TOPOLOGICAL STATE_COMPRESSION STUBBORN_SETS USE_NUPN UNFOLDING_TO_PT
lola: subprocess 8 will run for 446 seconds at most (--localtimelimit=0)
lola: ========================================
lola: ...considering subproblem: E (F ((FIREABLE(GAP_dehydrogenase) AND (FIREABLE(Phosphoclucose_isomerase) OR (NOT FIREABLE(TIM_backward) AND NOT FIREABLE(Transketolase1))))))
lola: ========================================
lola: SUBTASK
lola: checking reachability
lola: Planning: workflow for reachability check: stateequation||search (--findpath=off)
lola: rewrite Frontend/Parser/formula_rewrite.k:625
lola: processed formula: E (F ((FIREABLE(GAP_dehydrogenase) AND (FIREABLE(Phosphoclucose_isomerase) OR (NOT FIREABLE(TIM_backward) AND NOT FIREABLE(Transketolase1))))))
lola: processed formula length: 144
lola: 10 rewrites
lola: closed formula file GPPP-PT-C0100N0000000100-ReachabilityFireability.task
lola: STORE
lola: using a simple compression encoder (--encoder=simplecompressed)
lola: using a prefix tree store (--store=prefix)
lola: SEARCH (state space)
lola: state space: using reachability graph (--search=depth)
lola: state space: using reachability preserving stubborn set method with insertion algorithm (--stubborn=tarjan)
lola: RUNNING
lola: rewrite Frontend/Parser/formula_rewrite.k:625
lola: formula 0: (FIREABLE(GAP_dehydrogenase) AND (FIREABLE(Phosphoclucose_isomerase) OR (NOT FIREABLE(TIM_backward) AND NOT FIREABLE(Transketolase1))))
lola: state equation: Generated DNF with 6 literals and 1 conjunctive subformulas
lola: state equation: write sara problem file to GPPP-PT-C0100N0000000100-ReachabilityFireability-8-0.sara
lola: state equation: calling and running sara
sara: try reading problem file GPPP-PT-C0100N0000000100-ReachabilityFireability-8-0.sara.
sara: place or transition ordering is non-deterministic
lola: state equation 0: solution produced
lola: SUBRESULT
lola: result: yes
lola: produced by: state equation
lola: The predicate is reachable.
FORMULA GPPP-PT-C0100N0000000100-ReachabilityFireability-8 TRUE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT TOPOLOGICAL STATE_COMPRESSION STUBBORN_SETS USE_NUPN UNFOLDING_TO_PT
lola: subprocess 9 will run for 509 seconds at most (--localtimelimit=0)
lola: ========================================
lola: ...considering subproblem: E (F ((FIREABLE(GAP_dehydrogenase) AND FIREABLE(generate) AND FIREABLE(Phosphoglycerate_kinase) AND NOT FIREABLE(Pyruvate_kinase))))
lola: ========================================
lola: SUBTASK
lola: checking reachability
lola: Planning: workflow for reachability check: stateequation||search (--findpath=off)
lola: rewrite Frontend/Parser/formula_rewrite.k:625
lola: processed formula: E (F ((FIREABLE(GAP_dehydrogenase) AND FIREABLE(generate) AND FIREABLE(Phosphoglycerate_kinase) AND NOT FIREABLE(Pyruvate_kinase))))
lola: processed formula length: 132
lola: 10 rewrites
lola: closed formula file GPPP-PT-C0100N0000000100-ReachabilityFireability.task
lola: STORE
lola: using a simple compression encoder (--encoder=simplecompressed)
lola: using a prefix tree store (--store=prefix)
lola: SEARCH (state space)
lola: state space: using reachability graph (--search=depth)
lola: state space: using reachability preserving stubborn set method with insertion algorithm (--stubborn=tarjan)
lola: RUNNING
lola: rewrite Frontend/Parser/formula_rewrite.k:625
lola: formula 0: (FIREABLE(GAP_dehydrogenase) AND FIREABLE(generate) AND FIREABLE(Phosphoglycerate_kinase) AND NOT FIREABLE(Pyruvate_kinase))
lola: state equation: Generated DNF with 8 literals and 1 conjunctive subformulas
lola: state equation: write sara problem file to GPPP-PT-C0100N0000000100-ReachabilityFireability-9-0.sara
lola: state equation: calling and running sara
sara: try reading problem file GPPP-PT-C0100N0000000100-ReachabilityFireability-9-0.sara.
sara: place or transition ordering is non-deterministic
lola: ========================================
lola: sara is running 0 secs || 3640089 markings, 8651856 edges, 728018 markings/sec, 0 secs
lola: sara is running 5 secs || 7055317 markings, 16646329 edges, 683046 markings/sec, 5 secs
lola: sara is running 10 secs || 11208218 markings, 24752794 edges, 830580 markings/sec, 10 secs
lola: sara is running 15 secs || 15633604 markings, 32698117 edges, 885077 markings/sec, 15 secs
lola: sara is running 20 secs || 19967067 markings, 40477730 edges, 866693 markings/sec, 20 secs
lola: sara is running 25 secs || 24203684 markings, 48139214 edges, 847323 markings/sec, 25 secs
lola: sara is running 30 secs || 28402767 markings, 55625766 edges, 839817 markings/sec, 30 secs
lola: sara is running 35 secs || 32193730 markings, 62396057 edges, 758193 markings/sec, 35 secs
lola: sara is running 40 secs || 36275967 markings, 69818804 edges, 816447 markings/sec, 40 secs
lola: sara is running 45 secs || 40387095 markings, 77099436 edges, 822226 markings/sec, 45 secs
lola: sara is running 50 secs || 44548221 markings, 84753346 edges, 832225 markings/sec, 50 secs
lola: sara is running 55 secs || 48831174 markings, 92225290 edges, 856591 markings/sec, 55 secs
lola: sara is running 60 secs || 53050185 markings, 99854477 edges, 843802 markings/sec, 60 secs
lola: sara is running 65 secs || 56938041 markings, 107725700 edges, 777571 markings/sec, 65 secs
lola: sara is running 70 secs || 59591430 markings, 114780731 edges, 530678 markings/sec, 70 secs
lola: sara is running 75 secs || 62138530 markings, 121559411 edges, 509420 markings/sec, 75 secs
lola: sara is running 80 secs || 65160831 markings, 129598975 edges, 604460 markings/sec, 80 secs
lola: sara is running 85 secs || 67940275 markings, 136995991 edges, 555889 markings/sec, 85 secs
lola: sara is running 90 secs || 70821478 markings, 144660142 edges, 576241 markings/sec, 90 secs
lola: sara is running 95 secs || 73719166 markings, 152371657 edges, 579538 markings/sec, 95 secs
lola: sara is running 100 secs || 76616808 markings, 160078970 edges, 579528 markings/sec, 100 secs
lola: sara is running 105 secs || 79486443 markings, 167713050 edges, 573927 markings/sec, 105 secs
lola: sara is running 110 secs || 82260239 markings, 175093500 edges, 554759 markings/sec, 110 secs
lola: sara is running 115 secs || 84912845 markings, 182148353 edges, 530521 markings/sec, 115 secs
lola: sara is running 120 secs || 87744392 markings, 189679934 edges, 566309 markings/sec, 120 secs
lola: sara is running 125 secs || 90583281 markings, 197230836 edges, 567778 markings/sec, 125 secs
lola: sara is running 130 secs || 93436684 markings, 204819981 edges, 570681 markings/sec, 130 secs
lola: sara is running 135 secs || 96300206 markings, 212435833 edges, 572704 markings/sec, 135 secs
lola: sara is running 140 secs || 99169339 markings, 220066829 edges, 573827 markings/sec, 140 secs
lola: sara is running 145 secs || 102071739 markings, 227782946 edges, 580480 markings/sec, 145 secs
lola: sara is running 150 secs || 104952075 markings, 235441649 edges, 576067 markings/sec, 150 secs
lola: sara is running 155 secs || 107803637 markings, 243024982 edges, 570312 markings/sec, 155 secs
lola: sara is running 160 secs || 110443292 markings, 250039643 edges, 527931 markings/sec, 160 secs
lola: sara is running 165 secs || 112918163 markings, 256617110 edges, 494974 markings/sec, 165 secs
lola: sara is running 170 secs || 115757748 markings, 264162240 edges, 567917 markings/sec, 170 secs
lola: sara is running 175 secs || 118386550 markings, 271148355 edges, 525760 markings/sec, 175 secs
lola: sara is running 180 secs || 120817084 markings, 277600148 edges, 486107 markings/sec, 180 secs
lola: sara is running 185 secs || 123222392 markings, 283985158 edges, 481062 markings/sec, 185 secs
lola: sara is running 190 secs || 125884605 markings, 291046856 edges, 532443 markings/sec, 190 secs
lola: sara is running 195 secs || 128589308 markings, 297698267 edges, 540941 markings/sec, 195 secs
lola: sara is running 200 secs || 132155202 markings, 305618597 edges, 713179 markings/sec, 200 secs
lola: sara is running 205 secs || 135335132 markings, 313112901 edges, 635986 markings/sec, 205 secs
lola: sara is running 210 secs || 138378443 markings, 320550942 edges, 608662 markings/sec, 210 secs
lola: sara is running 215 secs || 141462539 markings, 327848875 edges, 616819 markings/sec, 215 secs
lola: sara is running 220 secs || 144762436 markings, 335352134 edges, 659979 markings/sec, 220 secs
lola: sara is running 225 secs || 148103530 markings, 342965443 edges, 668219 markings/sec, 225 secs
lola: sara is running 230 secs || 151567353 markings, 350906154 edges, 692765 markings/sec, 230 secs
lola: sara is running 235 secs || 155033975 markings, 358854093 edges, 693324 markings/sec, 235 secs
lola: sara is running 240 secs || 158460965 markings, 366696393 edges, 685398 markings/sec, 240 secs
lola: sara is running 245 secs || 161486119 markings, 373928533 edges, 605031 markings/sec, 245 secs
lola: sara is running 250 secs || 164699230 markings, 381678459 edges, 642622 markings/sec, 250 secs
lola: sara is running 255 secs || 167546808 markings, 388333818 edges, 569516 markings/sec, 255 secs
lola: sara is running 260 secs || 170898518 markings, 395974653 edges, 670342 markings/sec, 260 secs
lola: sara is running 265 secs || 174167361 markings, 403394367 edges, 653769 markings/sec, 265 secs
lola: sara is running 270 secs || 177457791 markings, 410871751 edges, 658086 markings/sec, 270 secs
lola: sara is running 275 secs || 180827459 markings, 418572114 edges, 673934 markings/sec, 275 secs
lola: sara is running 280 secs || 184021242 markings, 426280788 edges, 638757 markings/sec, 280 secs
lola: sara is running 285 secs || 187185126 markings, 433941396 edges, 632777 markings/sec, 285 secs
lola: sara is running 290 secs || 190364443 markings, 441399866 edges, 635863 markings/sec, 290 secs
lola: sara is running 295 secs || 193587634 markings, 448696928 edges, 644638 markings/sec, 295 secs
lola: sara is running 300 secs || 196747034 markings, 455824010 edges, 631880 markings/sec, 300 secs
lola: sara is running 305 secs || 200059284 markings, 463358781 edges, 662450 markings/sec, 305 secs
lola: sara is running 310 secs || 203283445 markings, 470782868 edges, 644832 markings/sec, 310 secs
lola: sara is running 315 secs || 206328609 markings, 478230990 edges, 609033 markings/sec, 315 secs
lola: sara is running 320 secs || 209374948 markings, 485591912 edges, 609268 markings/sec, 320 secs
lola: sara is running 325 secs || 212742831 markings, 493289357 edges, 673577 markings/sec, 325 secs
lola: sara is running 330 secs || 216025332 markings, 500744087 edges, 656500 markings/sec, 330 secs
lola: sara is running 335 secs || 219314848 markings, 508217628 edges, 657903 markings/sec, 335 secs
lola: sara is running 340 secs || 222656720 markings, 515830611 edges, 668374 markings/sec, 340 secs
lola: sara is running 345 secs || 225953978 markings, 523393488 edges, 659452 markings/sec, 345 secs
lola: sara is running 350 secs || 228924291 markings, 530699657 edges, 594063 markings/sec, 350 secs
lola: sara is running 355 secs || 231894674 markings, 537870101 edges, 594077 markings/sec, 355 secs
lola: sara is running 360 secs || 234932073 markings, 544670029 edges, 607480 markings/sec, 360 secs
lola: sara is running 365 secs || 238043837 markings, 551668737 edges, 622353 markings/sec, 365 secs
lola: sara is running 370 secs || 241141859 markings, 558630757 edges, 619604 markings/sec, 370 secs
lola: sara is running 375 secs || 244120342 markings, 565923956 edges, 595697 markings/sec, 375 secs
lola: sara is running 380 secs || 247188962 markings, 573409596 edges, 613724 markings/sec, 380 secs
lola: sara is running 385 secs || 250405383 markings, 580736648 edges, 643284 markings/sec, 385 secs
lola: sara is running 390 secs || 253698819 markings, 588219351 edges, 658687 markings/sec, 390 secs
lola: sara is running 395 secs || 256986046 markings, 595685454 edges, 657445 markings/sec, 395 secs
lola: sara is running 400 secs || 260187781 markings, 602923433 edges, 640347 markings/sec, 400 secs
lola: sara is running 405 secs || 263050630 markings, 609836073 edges, 572570 markings/sec, 405 secs
lola: state equation:solution unknown
lola: sara is running 410 secs || 265746869 markings, 616449885 edges, 539248 markings/sec, 410 secs
lola: sara is running 415 secs || 269111112 markings, 624120709 edges, 672849 markings/sec, 415 secs
lola: sara is running 420 secs || 272528076 markings, 631932417 edges, 683393 markings/sec, 420 secs
lola: sara is running 425 secs || 275945165 markings, 639744240 edges, 683418 markings/sec, 425 secs
lola: sara is running 430 secs || 279337444 markings, 647489895 edges, 678456 markings/sec, 430 secs
lola: sara is running 435 secs || 282706676 markings, 655174050 edges, 673846 markings/sec, 435 secs
lola: sara is running 440 secs || 285904056 markings, 662788640 edges, 639476 markings/sec, 440 secs
lola: sara is running 445 secs || 289022230 markings, 670367335 edges, 623635 markings/sec, 445 secs
lola: sara is running 450 secs || 292175075 markings, 677824066 edges, 630569 markings/sec, 450 secs
lola: sara is running 455 secs || 295456583 markings, 685273301 edges, 656302 markings/sec, 455 secs
lola: sara is running 460 secs || 298799416 markings, 692886307 edges, 668567 markings/sec, 460 secs
lola: sara is running 465 secs || 302147857 markings, 700514280 edges, 669688 markings/sec, 465 secs
lola: sara is running 470 secs || 305486399 markings, 708115751 edges, 667708 markings/sec, 470 secs
lola: sara is running 475 secs || 308666581 markings, 715580704 edges, 636036 markings/sec, 475 secs
lola: sara is running 480 secs || 311714046 markings, 723032023 edges, 609493 markings/sec, 480 secs
lola: sara is running 485 secs || 314841819 markings, 730463083 edges, 625555 markings/sec, 485 secs
lola: sara is running 490 secs || 318118977 markings, 737899969 edges, 655432 markings/sec, 490 secs
lola: sara is running 495 secs || 321400699 markings, 745349191 edges, 656344 markings/sec, 495 secs
lola: sara is running 500 secs || 324661411 markings, 752742402 edges, 652142 markings/sec, 500 secs
lola: local time limit reached - aborting
lola:
preliminary result: no unknown yes yes unknown yes yes no yes unknown unknown unknown unknown yes unknown no
lola: Child process aborted or communication problem between parent and child process
lola: subprocess 10 will run for 509 seconds at most (--localtimelimit=0)
lola: ========================================
lola: ...considering subproblem: A (G ((NOT FIREABLE(Phosphoglycerate_mutase) OR NOT FIREABLE(Aldolase) OR (NOT FIREABLE(Phosphoglycerate_mutase) AND NOT FIREABLE(TIM_backward)) OR NOT FIREABLE(Glutathione_reductose))))
lola: ========================================
lola: SUBTASK
lola: checking invariance
lola: Planning: workflow for reachability check: stateequation||search (--findpath=off)
lola: rewrite Frontend/Parser/formula_rewrite.k:631
lola: rewrite Frontend/Parser/formula_rewrite.k:694
lola: processed formula: A (G ((NOT FIREABLE(Phosphoglycerate_mutase) OR NOT FIREABLE(Aldolase) OR (NOT FIREABLE(Phosphoglycerate_mutase) AND NOT FIREABLE(TIM_backward)) OR NOT FIREABLE(Glutathione_reductose))))
lola: processed formula length: 189
lola: 11 rewrites
lola: closed formula file GPPP-PT-C0100N0000000100-ReachabilityFireability.task
lola: STORE
lola: using a simple compression encoder (--encoder=simplecompressed)
lola: using a prefix tree store (--store=prefix)
lola: SEARCH (state space)
lola: state space: using reachability graph (--search=depth)
lola: state space: using reachability preserving stubborn set method with insertion algorithm (--stubborn=tarjan)
lola: RUNNING
lola: rewrite Frontend/Parser/formula_rewrite.k:631
lola: rewrite Frontend/Parser/formula_rewrite.k:694
lola: formula 0: (FIREABLE(Phosphoglycerate_mutase) AND FIREABLE(Aldolase) AND (FIREABLE(Phosphoglycerate_mutase) OR FIREABLE(TIM_backward)) AND FIREABLE(Glutathione_reductose))
lola: state equation: Generated DNF with 10 literals and 2 conjunctive subformulas
lola: state equation: write sara problem file to GPPP-PT-C0100N0000000100-ReachabilityFireability-10-0.sara
lola: lola: SUBRESULT
lola: result: no
lola: produced by: state space
lola: The predicate is not invariant.
lola: 215 markings, 214 edges
lola: ========================================
FORMULA GPPP-PT-C0100N0000000100-ReachabilityFireability-10 FALSE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT TOPOLOGICAL STATE_COMPRESSION STUBBORN_SETS USE_NUPN UNFOLDING_TO_PT
lola: subprocess 11 will run for 611 seconds at most (--localtimelimit=0)
lola: ========================================
lola: ...considering subproblem: A (G ((NOT FIREABLE(Glutathione_oxidation) OR NOT FIREABLE(Ru5P_isomerase) OR NOT FIREABLE(Transketolase1) OR NOT FIREABLE(G6P_dehydrogenase) OR NOT FIREABLE(Lactate_dehydrogenase))))
lola: ========================================
lola: SUBTASK
lola: checking invariance
lola: Planning: workflow for reachability check: stateequation||search (--findpath=off)
lola: rewrite Frontend/Parser/formula_rewrite.k:631
lola: rewrite Frontend/Parser/formula_rewrite.k:694
lola: processed formula: A (G ((NOT FIREABLE(Glutathione_oxidation) OR NOT FIREABLE(Ru5P_isomerase) OR NOT FIREABLE(Transketolase1) OR NOT FIREABLE(G6P_dehydrogenase) OR NOT FIREABLE(Lactate_dehydrogenase))))
lola: processed formula length: 187
lola: 11 rewrites
lola: closed formula file GPPP-PT-C0100N0000000100-ReachabilityFireability.task
lola: STORE
lola: using a simple compression encoder (--encoder=simplecompressed)
lola: using a prefix tree store (--store=prefix)
lola: SEARCH (state space)
lola: state space: using reachability graph (--search=depth)
lola: state space: using reachability preserving stubborn set method with insertion algorithm (--stubborn=tarjan)
lola: RUNNING
lola: rewrite Frontend/Parser/formula_rewrite.k:631
lola: rewrite Frontend/Parser/formula_rewrite.k:694
lola: formula 0: (FIREABLE(Glutathione_oxidation) AND FIREABLE(Ru5P_isomerase) AND FIREABLE(Transketolase1) AND FIREABLE(G6P_dehydrogenase) AND FIREABLE(Lactate_dehydrogenase))
lola: state equation: Generated DNF with 10 literals and 1 conjunctive subformulas
lola: state equation: write sara problem file to GPPP-PT-C0100N0000000100-ReachabilityFireability-11-0.sara
lola: state equation: calling and running sara
sara: try reading problem file GPPP-PT-C0100N0000000100-ReachabilityFireability-11-0.sara.
sara: place or transition ordering is non-deterministic
lola: state equation: solution impossible
lola: SUBRESULT
lola: result: yes
lola: produced by: state equation
lola: The predicate is invariant.
lola: ========================================
FORMULA GPPP-PT-C0100N0000000100-ReachabilityFireability-12 TRUE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT TOPOLOGICAL STATE_COMPRESSION STUBBORN_SETS USE_NUPN UNFOLDING_TO_PT
lola: subprocess 12 will run for 764 seconds at most (--localtimelimit=0)
lola: ========================================
lola: ...considering subproblem: E (F (((NOT FIREABLE(Aldolase)) AND FIREABLE(Enolase) AND ((FIREABLE(Aldolase) AND FIREABLE(Glutathione_oxidation) AND NOT FIREABLE(Pyruvate_kinase)) OR FIREABLE(Phosphofructokinase)))))
lola: ========================================
lola: SUBTASK
lola: checking reachability
lola: Planning: workflow for reachability check: stateequation||search (--findpath=off)
lola: rewrite Frontend/Parser/formula_rewrite.k:625
lola: processed formula: E (F (((NOT FIREABLE(Aldolase)) AND FIREABLE(Enolase) AND ((FIREABLE(Aldolase) AND FIREABLE(Glutathione_oxidation) AND NOT FIREABLE(Pyruvate_kinase)) OR FIREABLE(Phosphofructokinase)))))
lola: processed formula length: 187
lola: 10 rewrites
lola: closed formula file GPPP-PT-C0100N0000000100-ReachabilityFireability.task
lola: STORE
lola: using a simple compression encoder (--encoder=simplecompressed)
lola: using a prefix tree store (--store=prefix)
lola: SEARCH (state space)
lola: state space: using reachability graph (--search=depth)
lola: state space: using reachability preserving stubborn set method with insertion algorithm (--stubborn=tarjan)
lola: RUNNING
lola: rewrite Frontend/Parser/formula_rewrite.k:625
lola: formula 0: ((NOT FIREABLE(Aldolase)) AND FIREABLE(Enolase) AND ((FIREABLE(Aldolase) AND FIREABLE(Glutathione_oxidation) AND NOT FIREABLE(Pyruvate_kinase)) OR FIREABLE(Phosphofructokinase)))
lola: state equation: Generated DNF with 4 literals and 1 conjunctive subformulas
lola: state equation: write sara problem file to GPPP-PT-C0100N0000000100-ReachabilityFireability-12-0.sara
lola: SUBRESULT
lola: result: yes
lola: produced by: state space
lola: The predicate is reachable.
lola: 214 markings, 213 edges
lola: ========================================
FORMULA GPPP-PT-C0100N0000000100-ReachabilityFireability-4 TRUE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT TOPOLOGICAL STATE_COMPRESSION STUBBORN_SETS USE_NUPN UNFOLDING_TO_PT
lola: subprocess 13 will run for 1019 seconds at most (--localtimelimit=0)
lola: ========================================
lola: ...considering subproblem: E (F ((FIREABLE(Glutathione_reductose) AND ((FIREABLE(Transaldolase) AND FIREABLE(Glutathione_oxidation) AND NOT FIREABLE(Hexokinase)) OR FIREABLE(generate)))))
lola: ========================================
lola: SUBTASK
lola: checking reachability
lola: Planning: workflow for reachability check: stateequation||search (--findpath=off)
lola: rewrite Frontend/Parser/formula_rewrite.k:625
lola: processed formula: E (F ((FIREABLE(Glutathione_reductose) AND ((FIREABLE(Transaldolase) AND FIREABLE(Glutathione_oxidation) AND NOT FIREABLE(Hexokinase)) OR FIREABLE(generate)))))
lola: processed formula length: 161
lola: 10 rewrites
lola: closed formula file GPPP-PT-C0100N0000000100-ReachabilityFireability.task
lola: STORE
lola: using a simple compression encoder (--encoder=simplecompressed)
lola: using a prefix tree store (--store=prefix)
lola: SEARCH (state space)
lola: state space: using reachability graph (--search=depth)
lola: state space: using reachability preserving stubborn set method with insertion algorithm (--stubborn=tarjan)
lola: RUNNING
lola: rewrite Frontend/Parser/formula_rewrite.k:625
lola: formula 0: (FIREABLE(Glutathione_reductose) AND ((FIREABLE(Transaldolase) AND FIREABLE(Glutathione_oxidation) AND NOT FIREABLE(Hexokinase)) OR FIREABLE(generate)))
lola: state equation: Generated DNF with 17 literals and 3 conjunctive subformulas
lola: state equation: write sara problem file to GPPP-PT-C0100N0000000100-ReachabilityFireability-13-0.sara
lola: lola: state equation: calling and running sara SUBRESULT
lola: result: yes
lola: produced by: state space
lola: The predicate is reachable.
lola: sara: try reading problem file GPPP-PT-C0100N0000000100-ReachabilityFireability-13-0.sara.
409 markings, 408 edges
lola: ========================================
FORMULA GPPP-PT-C0100N0000000100-ReachabilityFireability-9 TRUE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT TOPOLOGICAL STATE_COMPRESSION STUBBORN_SETS USE_NUPN UNFOLDING_TO_PT
sara: place or transition ordering is non-deterministic
lola: subprocess 14 will run for 1529 seconds at most (--localtimelimit=0)
lola: ========================================
lola: ...considering subproblem: A (G ((FIREABLE(Phosphofructokinase) OR NOT FIREABLE(remove) OR (NOT FIREABLE(Phosphoglycerate_kinase) AND NOT FIREABLE(Phosphofructokinase) AND FIREABLE(Ru5P_epimerase) AND NOT FIREABLE(Glutathione_oxidation)))))
lola: ========================================
lola: SUBTASK
lola: checking invariance
lola: Planning: workflow for reachability check: stateequation||search (--findpath=off)
lola: rewrite Frontend/Parser/formula_rewrite.k:631
lola: rewrite Frontend/Parser/formula_rewrite.k:694
lola: processed formula: A (G ((FIREABLE(Phosphofructokinase) OR NOT FIREABLE(remove) OR (NOT FIREABLE(Phosphoglycerate_kinase) AND NOT FIREABLE(Phosphofructokinase) AND FIREABLE(Ru5P_epimerase) AND NOT FIREABLE(Glutathione_oxidation)))))
lola: processed formula length: 215
lola: 11 rewrites
lola: closed formula file GPPP-PT-C0100N0000000100-ReachabilityFireability.task
lola: STORE
lola: using a simple compression encoder (--encoder=simplecompressed)
lola: using a prefix tree store (--store=prefix)
lola: SEARCH (state space)
lola: state space: using reachability graph (--search=depth)
lola: state space: using reachability preserving stubborn set method with insertion algorithm (--stubborn=tarjan)
lola: RUNNING
lola: rewrite Frontend/Parser/formula_rewrite.k:631
lola: rewrite Frontend/Parser/formula_rewrite.k:694
lola: formula 0: (NOT FIREABLE(Phosphofructokinase) AND FIREABLE(remove) AND (FIREABLE(Phosphoglycerate_kinase) OR FIREABLE(Phosphofructokinase) OR NOT FIREABLE(Ru5P_epimerase) OR FIREABLE(Glutathione_oxidation)))
lola: state equation: Generated DNF with 34 literals and 8 conjunctive subformulas
lola: state equation: write sara problem file to GPPP-PT-C0100N0000000100-ReachabilityFireability-14-0.sara
lola: state equation: calling and running sara
sara: try reading problem file GPPP-PT-C0100N0000000100-ReachabilityFireability-14-0.sara.
sara: place or transition ordering is non-deterministic
lola: state equation: solution impossible
lola: SUBRESULT
lola: result: yes
lola: produced by: state equation
lola: The predicate is invariant.
lola:
========================================
FORMULA GPPP-PT-C0100N0000000100-ReachabilityFireability-1 TRUE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT TOPOLOGICAL STATE_COMPRESSION STUBBORN_SETS USE_NUPN UNFOLDING_TO_PT
lola: subprocess 15 will run for 3058 seconds at most (--localtimelimit=0)
lola: ========================================
lola: ...considering subproblem: A (G ((NOT FIREABLE(Enolase) OR ((FIREABLE(TIM_forward) OR FIREABLE(Phosphoclucose_isomerase)) AND NOT FIREABLE(TIM_backward) AND FIREABLE(Glutathione_oxidation) AND FIREABLE(Phosphofructokinase)))))
lola: ========================================
lola: SUBTASK
lola: checking invariance
lola: Planning: workflow for reachability check: stateequation||search (--findpath=off)
lola: rewrite Frontend/Parser/formula_rewrite.k:631
lola: rewrite Frontend/Parser/formula_rewrite.k:694
lola: processed formula: A (G ((NOT FIREABLE(Enolase) OR ((FIREABLE(TIM_forward) OR FIREABLE(Phosphoclucose_isomerase)) AND NOT FIREABLE(TIM_backward) AND FIREABLE(Glutathione_oxidation) AND FIREABLE(Phosphofructokinase)))))
lola: processed formula length: 201
lola: 11 rewrites
lola: closed formula file GPPP-PT-C0100N0000000100-ReachabilityFireability.task
lola: STORE
lola: using a simple compression encoder (--encoder=simplecompressed)
lola: using a prefix tree store (--store=prefix)
lola: SEARCH (state space)
lola: state space: using reachability graph (--search=depth)
lola: state space: using reachability preserving stubborn set method with insertion algorithm (--stubborn=tarjan)
lola: RUNNING
lola: rewrite Frontend/Parser/formula_rewrite.k:631
lola: rewrite Frontend/Parser/formula_rewrite.k:694
lola: formula 0: (FIREABLE(Enolase) AND ((NOT FIREABLE(TIM_forward) AND NOT FIREABLE(Phosphoclucose_isomerase)) OR FIREABLE(TIM_backward) OR NOT FIREABLE(Glutathione_oxidation) OR NOT FIREABLE(Phosphofructokinase)))
lola: state equation: Generated DNF with 14 literals and 6 conjunctive subformulas
lola: state equation: write sara problem file to GPPP-PT-C0100N0000000100-ReachabilityFireability-15-0.sara
lola: state equation: calling and running sara
lola: SUBRESULT
lola: result: no
lola: produced by: state space
lola: The predicate is not invariant.
lola: 17 markings, 16 edges
lola:
FORMULA GPPP-PT-C0100N0000000100-ReachabilityFireability-11 FALSE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT TOPOLOGICAL STATE_COMPRESSION STUBBORN_SETS USE_NUPN UNFOLDING_TO_PT
========================================
lola: ========================================
lola: ...considering subproblem: E (F ((FIREABLE(GAP_dehydrogenase) AND FIREABLE(generate) AND FIREABLE(Phosphoglycerate_kinase) AND NOT FIREABLE(Pyruvate_kinase))))
lola: ========================================
lola: SUBTASK
lola: checking reachability
lola: Planning: workflow for reachability check: stateequation||search (--findpath=off)
lola: rewrite Frontend/Parser/formula_rewrite.k:625
lola: processed formula: E (F ((FIREABLE(GAP_dehydrogenase) AND FIREABLE(generate) AND FIREABLE(Phosphoglycerate_kinase) AND NOT FIREABLE(Pyruvate_kinase))))
lola: processed formula length: 132
lola: 10 rewrites
lola: closed formula file GPPP-PT-C0100N0000000100-ReachabilityFireability.task
lola: STORE
lola: using a simple compression encoder (--encoder=simplecompressed)
lola: using a prefix tree store (--store=prefix)
lola: SEARCH (state space)
lola: state space: using reachability graph (--search=depth)
lola: state space: using reachability preserving stubborn set method with insertion algorithm (--stubborn=tarjan)
lola: RUNNING
lola: rewrite Frontend/Parser/formula_rewrite.k:625
lola: formula 0: (FIREABLE(GAP_dehydrogenase) AND FIREABLE(generate) AND FIREABLE(Phosphoglycerate_kinase) AND NOT FIREABLE(Pyruvate_kinase))
lola: state equation: Generated DNF with 8 literals and 1 conjunctive subformulas
lola: state equation: write sara problem file to GPPP-PT-C0100N0000000100-ReachabilityFireability-16-0.sara
lola: state equation: calling and running sara
sara: try reading problem file GPPP-PT-C0100N0000000100-ReachabilityFireability-16-0.sara.
sara: place or transition ordering is non-deterministic
lola: sara is running 0 secs || 3721427 markings, 8857349 edges, 744285 markings/sec, 0 secs
lola: sara is running 5 secs || 7426352 markings, 17616576 edges, 740985 markings/sec, 5 secs
lola: sara is running 10 secs || 11891181 markings, 26022705 edges, 892966 markings/sec, 10 secs
lola: sara is running 15 secs || 16255292 markings, 33854825 edges, 872822 markings/sec, 15 secs
lola: sara is running 20 secs || 20546425 markings, 41523800 edges, 858227 markings/sec, 20 secs
lola: sara is running 25 secs || 24791468 markings, 49126924 edges, 849009 markings/sec, 25 secs
lola: sara is running 30 secs || 28932675 markings, 56685319 edges, 828241 markings/sec, 30 secs
lola: sara is running 35 secs || 33212014 markings, 64268257 edges, 855868 markings/sec, 35 secs
lola: sara is running 40 secs || 37398267 markings, 71875701 edges, 837251 markings/sec, 40 secs
lola: sara is running 45 secs || 41687792 markings, 79515772 edges, 857905 markings/sec, 45 secs
lola: sara is running 50 secs || 45937395 markings, 87179932 edges, 849921 markings/sec, 50 secs
lola: sara is running 55 secs || 50338726 markings, 95001474 edges, 880266 markings/sec, 55 secs
lola: sara is running 60 secs || 54699644 markings, 102935918 edges, 872184 markings/sec, 60 secs
lola: sara is running 65 secs || 58269267 markings, 111262093 edges, 713925 markings/sec, 65 secs
lola: sara is running 70 secs || 61238737 markings, 119163120 edges, 593894 markings/sec, 70 secs
lola: sara is running 75 secs || 64219917 markings, 127097645 edges, 596236 markings/sec, 75 secs
lola: sara is running 80 secs || 67114939 markings, 134798347 edges, 579004 markings/sec, 80 secs
lola: sara is running 85 secs || 70043906 markings, 142593561 edges, 585793 markings/sec, 85 secs
lola: sara is running 90 secs || 72967598 markings, 150370297 edges, 584738 markings/sec, 90 secs
lola: sara is running 95 secs || 75723743 markings, 157707992 edges, 551229 markings/sec, 95 secs
lola: sara is running 100 secs || 78477022 markings, 165028132 edges, 550656 markings/sec, 100 secs
lola: sara is running 105 secs || 81118016 markings, 172053515 edges, 528199 markings/sec, 105 secs
lola: sara is running 110 secs || 83290064 markings, 177831526 edges, 434410 markings/sec, 110 secs
lola: sara is running 115 secs || 85757855 markings, 184396992 edges, 493558 markings/sec, 115 secs
lola: sara is running 120 secs || 88475734 markings, 191626818 edges, 543576 markings/sec, 120 secs
lola: sara is running 125 secs || 91345990 markings, 199260979 edges, 574051 markings/sec, 125 secs
lola: sara is running 130 secs || 94208493 markings, 206874633 edges, 572501 markings/sec, 130 secs
lola: sara is running 135 secs || 97096788 markings, 214553864 edges, 577659 markings/sec, 135 secs
lola: sara is running 140 secs || 99980854 markings, 222223671 edges, 576813 markings/sec, 140 secs
lola: sara is running 145 secs || 102863846 markings, 229889350 edges, 576598 markings/sec, 145 secs
lola: sara is running 150 secs || 105754479 markings, 237575710 edges, 578127 markings/sec, 150 secs
lola: sara is running 155 secs || 108656726 markings, 245290877 edges, 580449 markings/sec, 155 secs
lola: sara is running 160 secs || 111572291 markings, 253039055 edges, 583113 markings/sec, 160 secs
lola: sara is running 165 secs || 114499886 markings, 260822706 edges, 585519 markings/sec, 165 secs
lola: sara is running 170 secs || 117463301 markings, 268692534 edges, 592683 markings/sec, 170 secs
lola: sara is running 175 secs || 120427218 markings, 276565324 edges, 592783 markings/sec, 175 secs
lola: sara is running 180 secs || 123427231 markings, 284529252 edges, 600003 markings/sec, 180 secs
lola: sara is running 185 secs || 126501602 markings, 292681956 edges, 614874 markings/sec, 185 secs
lola: sara is running 190 secs || 129983967 markings, 301042628 edges, 696473 markings/sec, 190 secs
lola: sara is running 195 secs || 133365736 markings, 308847626 edges, 676354 markings/sec, 195 secs
lola: sara is running 200 secs || 136743195 markings, 316558381 edges, 675492 markings/sec, 200 secs
lola: sara is running 205 secs || 140105705 markings, 324229170 edges, 672502 markings/sec, 205 secs
lola: sara is running 210 secs || 143230814 markings, 331266643 edges, 625022 markings/sec, 210 secs
lola: sara is running 215 secs || 146213754 markings, 338583471 edges, 596588 markings/sec, 215 secs
lola: sara is running 220 secs || 149323786 markings, 346142136 edges, 622006 markings/sec, 220 secs
lola: sara is running 225 secs || 152628726 markings, 353737589 edges, 660988 markings/sec, 225 secs
lola: sara is running 230 secs || 156075882 markings, 361633462 edges, 689431 markings/sec, 230 secs
lola: sara is running 235 secs || 159497360 markings, 369460784 edges, 684296 markings/sec, 235 secs
lola: sara is running 240 secs || 162914206 markings, 377275842 edges, 683369 markings/sec, 240 secs
lola: sara is running 245 secs || 166272377 markings, 384934175 edges, 671634 markings/sec, 245 secs
lola: sara is running 250 secs || 168875193 markings, 391157465 edges, 520563 markings/sec, 250 secs
lola: sara is running 255 secs || 172027216 markings, 398795491 edges, 630405 markings/sec, 255 secs
lola: sara is running 260 secs || 175167220 markings, 406061722 edges, 628001 markings/sec, 260 secs
lola: sara is running 265 secs || 178481191 markings, 413601639 edges, 662794 markings/sec, 265 secs
lola: sara is running 270 secs || 181395658 markings, 420075858 edges, 582893 markings/sec, 270 secs
lola: sara is running 275 secs || 184707266 markings, 427609507 edges, 662322 markings/sec, 275 secs
lola: sara is running 280 secs || 187871915 markings, 435180301 edges, 632930 markings/sec, 280 secs
lola: sara is running 285 secs || 190982189 markings, 442738935 edges, 622055 markings/sec, 285 secs
lola: sara is running 290 secs || 194175353 markings, 450265092 edges, 638633 markings/sec, 290 secs
lola: sara is running 295 secs || 197480108 markings, 457779596 edges, 660951 markings/sec, 295 secs
lola: sara is running 300 secs || 200449753 markings, 464400364 edges, 593929 markings/sec, 300 secs
lola: sara is running 305 secs || 203663057 markings, 471671132 edges, 642661 markings/sec, 305 secs
lola: sara is running 310 secs || 206830110 markings, 479131046 edges, 633411 markings/sec, 310 secs
lola: sara is running 315 secs || 209291119 markings, 485383440 edges, 492202 markings/sec, 315 secs
lola: sara is running 320 secs || 212397271 markings, 492367528 edges, 621230 markings/sec, 320 secs
lola: sara is running 325 secs || 215770896 markings, 500065391 edges, 674725 markings/sec, 325 secs
lola: sara is running 330 secs || 219116511 markings, 507688482 edges, 669123 markings/sec, 330 secs
lola: sara is running 335 secs || 222451923 markings, 515284393 edges, 667082 markings/sec, 335 secs
lola: sara is running 340 secs || 225571821 markings, 522701742 edges, 623980 markings/sec, 340 secs
lola: sara is running 345 secs || 228545688 markings, 530016537 edges, 594773 markings/sec, 345 secs
lola: sara is running 350 secs || 231722012 markings, 537409217 edges, 635265 markings/sec, 350 secs
lola: sara is running 355 secs || 234986408 markings, 544814985 edges, 652879 markings/sec, 355 secs
lola: sara is running 360 secs || 237903531 markings, 551294412 edges, 583425 markings/sec, 360 secs
lola: sara is running 365 secs || 241129779 markings, 558598507 edges, 645250 markings/sec, 365 secs
lola: sara is running 370 secs || 244229190 markings, 566121322 edges, 619882 markings/sec, 370 secs
lola: sara is running 375 secs || 247185092 markings, 573399622 edges, 591180 markings/sec, 375 secs
lola: sara is running 380 secs || 250399279 markings, 580720391 edges, 642837 markings/sec, 380 secs
lola: sara is running 385 secs || 253432134 markings, 587507983 edges, 606571 markings/sec, 385 secs
lola: sara is running 390 secs || 256723473 markings, 594985120 edges, 658268 markings/sec, 390 secs
lola: sara is running 395 secs || 259738943 markings, 601911264 edges, 603094 markings/sec, 395 secs
lola: sara is running 400 secs || 262705938 markings, 609213604 edges, 593399 markings/sec, 400 secs
lola: sara is running 405 secs || 265717198 markings, 616370689 edges, 602252 markings/sec, 405 secs
lola: state equation:solution unknown
lola: sara is running 410 secs || 269042071 markings, 623936571 edges, 664975 markings/sec, 410 secs
lola: sara is running 415 secs || 271695081 markings, 629710437 edges, 530602 markings/sec, 415 secs
lola: sara is running 420 secs || 274013764 markings, 635476147 edges, 463737 markings/sec, 420 secs
lola: sara is running 425 secs || 276519559 markings, 641276482 edges, 501159 markings/sec, 425 secs
lola: sara is running 430 secs || 279158755 markings, 647013270 edges, 527839 markings/sec, 430 secs
lola: sara is running 435 secs || 281608742 markings, 653084821 edges, 489997 markings/sec, 435 secs
lola: sara is running 440 secs || 284257491 markings, 659310820 edges, 529750 markings/sec, 440 secs
lola: sara is running 445 secs || 286959681 markings, 665215219 edges, 540438 markings/sec, 445 secs
lola: sara is running 450 secs || 289523707 markings, 671271148 edges, 512805 markings/sec, 450 secs
lola: sara is running 455 secs || 291789676 markings, 676795651 edges, 453194 markings/sec, 455 secs
lola: sara is running 460 secs || 294339527 markings, 682293580 edges, 509970 markings/sec, 460 secs
lola: sara is running 465 secs || 296715569 markings, 688155836 edges, 475208 markings/sec, 465 secs
lola: sara is running 470 secs || 299364840 markings, 694394705 edges, 529854 markings/sec, 470 secs
lola: sara is running 475 secs || 302716015 markings, 702029852 edges, 670235 markings/sec, 475 secs
lola: sara is running 480 secs || 306057215 markings, 709638343 edges, 668240 markings/sec, 480 secs
lola: sara is running 485 secs || 309378033 markings, 717192390 edges, 664164 markings/sec, 485 secs
lola: sara is running 490 secs || 312521996 markings, 724491578 edges, 628793 markings/sec, 490 secs
lola: sara is running 495 secs || 315348124 markings, 731542882 edges, 565226 markings/sec, 495 secs
lola: sara is running 500 secs || 318496508 markings, 738907246 edges, 629677 markings/sec, 500 secs
lola: sara is running 505 secs || 321771948 markings, 746339526 edges, 655088 markings/sec, 505 secs
lola: sara is running 510 secs || 325023306 markings, 753707742 edges, 650272 markings/sec, 510 secs
lola: sara is running 515 secs || 328321888 markings, 761201828 edges, 659716 markings/sec, 515 secs
lola: sara is running 520 secs || 331647687 markings, 768768481 edges, 665160 markings/sec, 520 secs
lola: sara is running 525 secs || 334769504 markings, 776355352 edges, 624363 markings/sec, 525 secs
lola: sara is running 530 secs || 337838001 markings, 783847178 edges, 613699 markings/sec, 530 secs
lola: sara is running 535 secs || 341021766 markings, 791163438 edges, 636753 markings/sec, 535 secs
lola: sara is running 540 secs || 344306968 markings, 798621165 edges, 657040 markings/sec, 540 secs
lola: sara is running 545 secs || 347592041 markings, 806078627 edges, 657015 markings/sec, 545 secs
lola: sara is running 550 secs || 350645536 markings, 812918281 edges, 610699 markings/sec, 550 secs
lola: sara is running 555 secs || 353299898 markings, 819567285 edges, 530872 markings/sec, 555 secs
lola: sara is running 560 secs || 356155282 markings, 826309814 edges, 571077 markings/sec, 560 secs
lola: sara is running 565 secs || 359160563 markings, 833020372 edges, 601056 markings/sec, 565 secs
lola: sara is running 570 secs || 362212608 markings, 839855705 edges, 610409 markings/sec, 570 secs
lola: sara is running 575 secs || 365221567 markings, 846947501 edges, 601792 markings/sec, 575 secs
lola: sara is running 580 secs || 368055915 markings, 854014904 edges, 566870 markings/sec, 580 secs
lola: sara is running 585 secs || 371083221 markings, 860905689 edges, 605461 markings/sec, 585 secs
lola: sara is running 590 secs || 374023879 markings, 867443512 edges, 588132 markings/sec, 590 secs
lola: sara is running 595 secs || 377139303 markings, 874447472 edges, 623085 markings/sec, 595 secs
lola: sara is running 600 secs || 380017996 markings, 881469403 edges, 575739 markings/sec, 600 secs
lola: sara is running 605 secs || 382661477 markings, 887871383 edges, 528696 markings/sec, 605 secs
lola: sara is running 610 secs || 385634170 markings, 894494059 edges, 594539 markings/sec, 610 secs
lola: sara is running 615 secs || 388750451 markings, 901499938 edges, 623256 markings/sec, 615 secs
lola: sara is running 620 secs || 391899842 markings, 908776382 edges, 629878 markings/sec, 620 secs
lola: sara is running 625 secs || 394893629 markings, 916133840 edges, 598757 markings/sec, 625 secs
lola: sara is running 630 secs || 397938311 markings, 923394802 edges, 608936 markings/sec, 630 secs
lola: sara is running 635 secs || 401144065 markings, 930638524 edges, 641151 markings/sec, 635 secs
lola: sara is running 640 secs || 404460011 markings, 938176333 edges, 663189 markings/sec, 640 secs
lola: sara is running 645 secs || 407767995 markings, 945692906 edges, 661597 markings/sec, 645 secs
lola: sara is running 650 secs || 411056324 markings, 953157083 edges, 657666 markings/sec, 650 secs
lola: sara is running 655 secs || 414032730 markings, 960456881 edges, 595281 markings/sec, 655 secs
lola: sara is running 660 secs || 417059387 markings, 967822755 edges, 605331 markings/sec, 660 secs
lola: sara is running 665 secs || 420355080 markings, 975345901 edges, 659139 markings/sec, 665 secs
lola: sara is running 670 secs || 423674094 markings, 982891220 edges, 663803 markings/sec, 670 secs
lola: sara is running 675 secs || 427013624 markings, 990491364 edges, 667906 markings/sec, 675 secs
lola: sara is running 680 secs || 430330649 markings, 998031322 edges, 663405 markings/sec, 680 secs
lola: sara is running 685 secs || 433558610 markings, 1005479931 edges, 645592 markings/sec, 685 secs
lola: sara is running 690 secs || 436634591 markings, 1012984732 edges, 615196 markings/sec, 690 secs
lola: sara is running 695 secs || 439683530 markings, 1020352171 edges, 609788 markings/sec, 695 secs
lola: sara is running 700 secs || 442928083 markings, 1027709633 edges, 648911 markings/sec, 700 secs
lola: sara is running 705 secs || 446143779 markings, 1034978606 edges, 643139 markings/sec, 705 secs
lola: sara is running 710 secs || 447156921 markings, 1037681734 edges, 202628 markings/sec, 710 secs
lola: sara is running 715 secs || 447168586 markings, 1037712877 edges, 2333 markings/sec, 715 secs
lola: sara is running 720 secs || 447175785 markings, 1037732108 edges, 1440 markings/sec, 720 secs
lola: sara is running 725 secs || 447194146 markings, 1037781164 edges, 3672 markings/sec, 725 secs
lola: sara is running 730 secs || 447218128 markings, 1037845273 edges, 4796 markings/sec, 730 secs
lola: sara is running 735 secs || 447233104 markings, 1037882402 edges, 2995 markings/sec, 735 secs
lola: sara is running 740 secs || 447239719 markings, 1037896810 edges, 1323 markings/sec, 740 secs
lola: sara is running 745 secs || 447251850 markings, 1037924742 edges, 2426 markings/sec, 745 secs
lola: sara is running 750 secs || 447257355 markings, 1037936245 edges, 1101 markings/sec, 750 secs
lola: sara is running 755 secs || 447273962 markings, 1037973798 edges, 3321 markings/sec, 755 secs
lola: sara is running 760 secs || 447277304 markings, 1037981393 edges, 668 markings/sec, 760 secs
lola: sara is running 765 secs || 447293045 markings, 1038017218 edges, 3148 markings/sec, 765 secs
lola: sara is running 770 secs || 447300549 markings, 1038036244 edges, 1501 markings/sec, 770 secs
lola: sara is running 775 secs || 447351487 markings, 1038143278 edges, 10188 markings/sec, 775 secs
lola: sara is running 780 secs || 447366920 markings, 1038189838 edges, 3087 markings/sec, 780 secs
lola: sara is running 785 secs || 447372351 markings, 1038204082 edges, 1086 markings/sec, 785 secs
lola: sara is running 790 secs || 447386154 markings, 1038240301 edges, 2761 markings/sec, 790 secs
lola: Child process aborted or communication problem between parent and child process
FORMULA GPPP-PT-C0100N0000000100-ReachabilityFireability-14 CANNOT_COMPUTE TECHNIQUES COLLATERAL_PROCESSING EXPLICIT TOPOLOGICAL STATE_COMPRESSION STUBBORN_SETS USE_NUPN UNFOLDING_TO_PT
lola: RESULT
lola:
SUMMARY: no yes yes yes yes yes yes no yes yes no no yes yes unknown no
lola:
preliminary result: no yes yes yes yes yes yes no yes yes no no yes yes unknown no
lola: memory consumption: 13368 KB
lola: time consumption: 1320 seconds
BK_STOP 1526732772195
--------------------
content from stderr:
Sequence of Actions to be Executed by the VM
This is useful if one wants to reexecute the tool in the VM from the submitted image disk.
set -x
# this is for BenchKit: configuration of major elements for the test
export BK_INPUT="GPPP-PT-C0100N0000000100"
export BK_EXAMINATION="ReachabilityFireability"
export BK_TOOL="lola"
export BK_RESULT_DIR="/tmp/BK_RESULTS/OUTPUTS"
export BK_TIME_CONFINEMENT="3600"
export BK_MEMORY_CONFINEMENT="16384"
# this is specific to your benchmark or test
export BIN_DIR="$HOME/BenchKit/bin"
# remove the execution directoty if it exists (to avoid increse of .vmdk images)
if [ -d execution ] ; then
rm -rf execution
fi
tar xzf /home/mcc/BenchKit/INPUTS/GPPP-PT-C0100N0000000100.tgz
mv GPPP-PT-C0100N0000000100 execution
cd execution
pwd
ls -lh
# this is for BenchKit: explicit launching of the test
echo "====================================================================="
echo " Generated by BenchKit 2-3637"
echo " Executing tool lola"
echo " Input is GPPP-PT-C0100N0000000100, examination is ReachabilityFireability"
echo " Time confinement is $BK_TIME_CONFINEMENT seconds"
echo " Memory confinement is 16384 MBytes"
echo " Number of cores is 4"
echo " Run identifier is r088-blw7-152649998300315"
echo "====================================================================="
echo
echo "--------------------"
echo "content from stdout:"
echo
echo "=== Data for post analysis generated by BenchKit (invocation template)"
echo
if [ "ReachabilityFireability" = "UpperBounds" ] ; then
echo "The expected result is a vector of positive values"
echo NUM_VECTOR
elif [ "ReachabilityFireability" != "StateSpace" ] ; then
echo "The expected result is a vector of booleans"
echo BOOL_VECTOR
else
echo "no data necessary for post analysis"
fi
echo
if [ -f "ReachabilityFireability.txt" ] ; then
echo "here is the order used to build the result vector(from text file)"
for x in $(grep Property ReachabilityFireability.txt | cut -d ' ' -f 2 | sort -u) ; do
echo "FORMULA_NAME $x"
done
elif [ -f "ReachabilityFireability.xml" ] ; then # for cunf (txt files deleted;-)
echo echo "here is the order used to build the result vector(from xml file)"
for x in $(grep '
echo "FORMULA_NAME $x"
done
fi
echo
echo "=== Now, execution of the tool begins"
echo
echo -n "BK_START "
date -u +%s%3N
echo
timeout -s 9 $BK_TIME_CONFINEMENT bash -c "/home/mcc/BenchKit/BenchKit_head.sh 2> STDERR ; echo ; echo -n \"BK_STOP \" ; date -u +%s%3N"
if [ $? -eq 137 ] ; then
echo
echo "BK_TIME_CONFINEMENT_REACHED"
fi
echo
echo "--------------------"
echo "content from stderr:"
echo
cat STDERR ;